Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb3

Orthogroup ID

OG0007946

Physical Location & Seq

Genomic Coordinates Reverse (-)

9983003 .. 9990319

Gene Structure 7317 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_3g15860.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3048 bp

ATGGGACCTTCAAAACACGGCACCGATAACAACCGGAGTATCAATAGTCAGACCCACACGCGCCACCAGCGCCTCCACGACGCTCTTAACCTAGGCACCAGAGTGTATGGAGACAAGCCAAGGAGATGGCAGTGTAAGGATATTGAGATACAGAGGCATGTGGTCCAATCTATTGCTGCGTTTCTCGATTCCGTTTCTGGGGATAAGCTGCACCATCCGCTTTTGAAGGCTTCAGTTGCCGATATCGTTGCAGCATTAGTCTGGATACTTCAGTCCAATAAGGGGTCCATATTGAGCATGGCAGCAAATGTGACAGTAAAATTAGTTGGCCTTTTACCCAAATCAACACTGCAGCTTGATGCTTTGGATCTCATTAATCCTCTGTCATCTTTGTTATCTGCCCATCAAACAGAAGTTGCGATATCATGTGCTGCAGCATTGAATGTTATCCTTACAAATCTCAGTATGAAGAATGCAAAAGAAGTTTGGGACATCTTTGAGAAAACAGAAAGTGTATCTCAAGTTATCAGTAACTTACGGTCCTTTTCAGAATGCATGAAGCCATTTGAATATTTTCAACAGATGGCTTTACTATTGAGTACAATACTATGGTGGTGGTCTCCATCTAGGTTTTATGTTTGGAGTGATGCTAAACTAATGGAAGATTTGAATGACATGCTTATAAAGCGAGATGTTTATCACAAAGTTGCTGTTTTGAAATTGTATTTCGCTGTAGCTTTATGTGGTAATGGGGCCAAGAAACTGTTAGAAGATGGAGAGGCACTTCTGGAACAGATGGTGCAATGCATGGGCAATTCATATCCTTATTCTGTTAGAATTGAAGCATTCAAGTTGGCACAGTGTTTAGCGATAAATGAACAAAGATGCTCAGAAATGATTAGTTTATCTTGCCGACCTATTATTAAAGTCATCATCTCTGGACTGTGTGACTGGAGCTCACATTCTAAAAAGGTTACCAACGACCAGATGTCTTTGCTATTGGAGGCATGCCGCTTGGCTCTGATCACTCGTTGGGCAGGGAAGCATCACATATACTTCTGGAAACAAGGGATCGATAAAATTCTTCTCAACCTCCTCCTTGAAAATATTCACAACCAATCGTATGAAGATTCCATTTCAATGGAAGAGCAGATAGTTATTGCTAAGGAGGGTCTCAATGCTAATTATTTACTTTCTTTGAGGAGTTATGTCTGGGATATTCTTGGATGGCTTGCGATACATTGTGGGGAGGATTTCAACCCTAAAACTGAGTTCTACTTTAACATGCTTATTGCATGTGCATGCTTGACCTTTGTTGAGGCAATTCAGAAATGGCATAAAGTATATGAAAATGACATTGCTGGTACCTTCATAAGTGAATCAGCAACAAGGGCAGTTCTGATGATGATTTATTCTCCCTGCAAATACATTGCATCAAGGGCTAGATTCATATTGTCTGAAATACTGAAGTCAAAGGGCTTGGAGTATCTGAATATCTTAATGCGTTTTCTTAATAATCTGTCATCTGGGAATTTCGCAATACCAGATAATCGCCAAATTATCATTTATTTGATGGGATTTATATGCTATTCCCGTTTGGAAGAGTATGAAGTCTGGATTATCAAACAGAAAGGGTTAAAAACACTATTTGCTTTCATGAAATGGTGCTTAAGTAATCACTTCCAAGTAGAAAGATTGAGCTTTGCTCCCCATTTGCATAATGCGTTCCATGAGAAGATTTGTTGTTCAAGTTCCAGAGACTGGGAAGGGAAAGATATTCTTTTGTTGTACAGTTTGTTGGGACTGGCTGAGTTGATAAAGCATTCTGGATATGTAGGAAATGACCTAGACAGAACTGCCGGCAAGAATACGTTGGCTCATATTGAAGCTGAACTAGTTAGTAAACTTCAGGACATCTGTAACAACAATGGTACCCCTGGGGTGCAATGGTATTCCGCATACGTTCTGAGTTATTTTGGGTTTTATGGTTTTCCGAGTAACCTAATGAAAAGGATTGGGAAAGCAATAAATGATAAGGATTCTGCTGATTTACAATTCATTCTCACAAATGGAGAGTGTTGCAGTGTTCATGGGGTGGTGCTTGCAATCCAATGTCCATCGTTACTGCCTCCTGAAGGGCGGCTTCCTAGTGAGATAACATCTGATCATTCTTCAGTGACAGGCTCTATGGAGATTTCTAAAGAGTTTCAGAAAGACATAAGACTATCCGCTCATGTCGATCACCAAGCATTGGTGAAGTTGTTGGAGTATATCTACTTGGGATATCTACAAGCAGAAGATGAACTTGCAAAGAAGTTGAGGACTCTTGCCAAACGTTGTAATTTGCAGCCTCTGTTACAGATGCTTTGTAGAAAACGTCCAAAGTGGGGCACTGCTTTTCCCAGCCCTGATCTCAGTGCAGCTCTTGGTCCATCCGGACATCGTTTCTCGGATGTCATCTTAGAAGCTAAAGAAACAAAGCTTTTGGGCTGGACATGTGGTGTTTGCTCTTTATCAGTGCCTCACATGCATGTTCACAAAGTTGTATTGTCAGCAAGTTGTGATTATCTGAGGGCCTTGTTTGAGTCAGGAATGCAGGAGAGCAATTCACAAGCCGTAAAGGTCTCAATCAGTTGGGAGGCAATGGTTAAACTAGTTGACTACTTCTATTCTGGTAACCTGCCAAAGCCTCCTTTGGGATGTATATGGAATAACATGAACACTGAAGAAAAGTTAGATGAGGTACAGCCATATGTAGAGCTTTTCTGGCTTTCTGAGTTCTGGATTATGGAAGATGTTCAGGAAGCATGTTCAGATGTCATCATGTCATGTCTTGGTTCTGCAAGAGAGTTGGCTATCAAAATACTACAAATTGCTGCAAATCTCTCTCTCTGGAACTTGGCCGAGGTTGCAGTGACTTATATGGCTCCTGTATATCGTCAGTTATGTGATTCTGGTGAACTCGAAACACTTGATGAACTGCTGGCTGATATGGTTCGGCTAGCGTCAGTTCGATTCTCCCAACAGGGTGGTGATCAGTTTCAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

BTB

Protein Analysis

1016

Amino Acids

114.74

Weight (kDa)

6.37

Isoelectric Point (pI)

44.15

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ARM_6	PF26522	135 - 248	1.8e-46	Plant ARM repeat
BTB	PF00651	842 - 897	2.8e-09	BTB/POZ domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007946)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G04390
fragaria_vesca	FvH4_3g15860
malus_domestica	MD05G1219300.v1.1
prunus_persica	Prupe.4G140600_v2.0.a1 Prupe.4G140600_v2.0.a1 Prupe.4G140600_v2.0.a1 Prupe.4G140600_v2.0.a1 Prupe.4G140600_v2.0.a1 Prupe.4G140600_v2.0.a1 Prupe.4G140600_v2.0.a1
pyrus_communis	pycom05g20050 pycom05g20060
rosa_chinensis	RchiOBHm_Chr5g0026671
rosa_laevigata	RLG00000032945
rosa_multiflora	Rmu_co8501061.1_g000001 Rmu_sc0004490.1_g000009
rosa_roxburghii	Rroxscaffold_1G00052790
rosa_rugosa	Rorug05G0094700 Rorug05G0094700
rosa_samantha	Rh5AG188300 Rh5BG184600 Rh5CG204500 Rh5DG186900
rosa_wichuraiana	Rw5G017040

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	683
Acc36I	ACCTGC	1 cut(s)	2688
Acc65I	GGTACC	2 cut(s)	1364, 1931
AccB1I	GGYRCC	4 cut(s)	20, 95, 1364, 1931
AccB7I	CCANNNNNTGG	2 cut(s)	1761, 2251
AccBSI	CCGCTC	1 cut(s)	2231
AccII	CGCG	1 cut(s)	61
AccIII	TCCGGA	1 cut(s)	2435
AciI	CCGC	5 cut(s)	218, 1012, 1956, 2140, 2229
AclI	AACGTT	1 cut(s)	2335
AclWI	GGATC	2 cut(s)	375, 1079
AcoI	YGGCCR	1 cut(s)	2901
AcsI	RAATTY	2 cut(s)	1080, 1531
AcuI	CTGAAG	7 cut(s)	216, 254, 1487, 1892, 2154, 2157, 2745
AfaI	GTAC	5 cut(s)	601, 1366, 1790, 1933, 2745
AfiI	CCNNNNNNNGG	7 cut(s)	198, 282, 1761, 2135, 2251, 2387, 2696
AflII	CTTAAG	1 cut(s)	1669
AflIII	ACRYGT	1 cut(s)	2495
AhdI	GACNNNNNGTC	1 cut(s)	988
AhlI	ACTAGT	2 cut(s)	1894, 2653
AjnI	CCWGG	1 cut(s)	1936
AleI	CACNNNNGTG	1 cut(s)	101
Alw21I	GWGCWC	1 cut(s)	959
Alw26I	GTCTC	5 cut(s)	105, 624, 1178, 1752, 2629
AlwI	GGATC	2 cut(s)	375, 1079
AlwNI	CAGNNNCTG	2 cut(s)	1761, 2353
Aor13HI	TCCGGA	1 cut(s)	2435
AoxI	GGCC	4 cut(s)	328, 753, 2574, 2901
ApoI	RAATTY	2 cut(s)	1080, 1531
AseI	ATTAAT	1 cut(s)	375
Asp700I	GAANNNNTTC	3 cut(s)	573, 1107, 2796
Asp718I	GGTACC	2 cut(s)	1364, 1931
AspA2I	CCTAGG	1 cut(s)	91
AspLEI	GCGC	2 cut(s)	63, 72
AspS9I	GGNCC	7 cut(s)	5, 163, 285, 540, 753, 2429, 2574
AsuHPI	GGTGA	4 cut(s)	2234, 2266, 2969, 3044
AsuNHI	GCTAGC	1 cut(s)	3001
AvaII	GGWCC	5 cut(s)	5, 163, 285, 540, 2429
AvrII	CCTAGG	1 cut(s)	91
BaeGI	GKGCMC	1 cut(s)	2393
BaeI	ACNNNNGTAYC	6 cut(s)	22, 55, 257, 290, 1915, 1948
BanI	GGYRCC	4 cut(s)	20, 95, 1364, 1931
BanII	GRGCYC	1 cut(s)	959
Bbv12I	GWGCWC	1 cut(s)	959
BceAI	ACGGC	2 cut(s)	34, 2600
BcgI	CGANNNNNNTGC	2 cut(s)	230, 264
BciT130I	CCWGG	1 cut(s)	1938
BciVI	GTATCC	1 cut(s)	258
BclI	TGATCA	3 cut(s)	1023, 2164, 3034
BcoDI	GTCTC	5 cut(s)	105, 624, 1178, 1752, 2629
BcuI	ACTAGT	2 cut(s)	1894, 2653
BfaI	CTAG	8 cut(s)	92, 627, 1443, 1847, 1895, 2148, 2654, 3002
BfmI	CTRYAG	3 cut(s)	350, 432, 732
BfoI	RGCGCY	1 cut(s)	73
BfrI	CTTAAG	1 cut(s)	1669
BfuAI	ACCTGC	1 cut(s)	2688
BfuI	GTATCC	1 cut(s)	258
BlnI	CCTAGG	1 cut(s)	91
Bme1390I	CCNGG	1 cut(s)	1938
Bme18I	GGWCC	5 cut(s)	5, 163, 285, 540, 2429
BmeRI	GACNNNNNGTC	1 cut(s)	988
BmgT120I	GGNCC	7 cut(s)	5, 163, 285, 540, 753, 2429, 2574
BmiI	GGNNCC	8 cut(s)	6, 22, 97, 286, 754, 1366, 1933, 2928
BmrFI	CCNGG	1 cut(s)	1938
BmrI	ACTGGG	1 cut(s)	1771
BmsI	GCATC	6 cut(s)	349, 637, 875, 1054, 1442, 2352
BmtI	GCTAGC	1 cut(s)	3005
BmuI	ACTGGG	1 cut(s)	1771
BplI	GAGNNNNNCTC	2 cut(s)	1690, 1722
BpmI	CTGGAG	1 cut(s)	973
Bpu10I	CCTNAGC	1 cut(s)	1164
BpuEI	CTTGAG	1 cut(s)	504
Bsa29I	ATCGAT	1 cut(s)	1074
BsaBI	GATNNNNATC	1 cut(s)	696
BsaI	GGTCTC	3 cut(s)	624, 1178, 2629
BsaJI	CCNNGG	5 cut(s)	91, 119, 1936, 1937, 2904
BsaWI	WCCGGW	2 cut(s)	33, 2435
Bsc4I	CCNNNNNNNGG	7 cut(s)	198, 282, 1761, 2135, 2251, 2387, 2696
Bse118I	RCCGGY	1 cut(s)	1859
Bse1I	ACTGG	3 cut(s)	956, 1766, 1809
Bse3DI	GCAATG	5 cut(s)	809, 1356, 1428, 1952, 2649
Bse8I	GATNNNNATC	1 cut(s)	696
BseAI	TCCGGA	1 cut(s)	2435
BseBI	CCWGG	1 cut(s)	1938
BseCI	ATCGAT	1 cut(s)	1074
BseDI	CCNNGG	5 cut(s)	91, 119, 1936, 1937, 2904
BseGI	GGATG	5 cut(s)	214, 1232, 2432, 2458, 2705
BseJI	GATNNNNATC	1 cut(s)	696
BseLI	CCNNNNNNNGG	7 cut(s)	198, 282, 1761, 2135, 2251, 2387, 2696
BseMI	GCAATG	5 cut(s)	809, 1356, 1428, 1952, 2649
BseMII	CTCAG	8 cut(s)	475, 903, 1260, 1800, 1958, 2428, 2561, 2766
BseNI	ACTGG	3 cut(s)	956, 1766, 1809
BseRI	GAGGAG	2 cut(s)	1085, 1216
BseSI	GKGCMC	1 cut(s)	2393
BseYI	CCCAGC	1 cut(s)	2402
BsgI	GTGCAG	2 cut(s)	194, 2439
Bsh1236I	CGCG	1 cut(s)	61
BshFI	GGCC	4 cut(s)	330, 755, 2576, 2903
BshNI	GGYRCC	4 cut(s)	20, 95, 1364, 1931
BshVI	ATCGAT	1 cut(s)	1074
BsiHKAI	GWGCWC	1 cut(s)	959
BsiSI	CCGG	3 cut(s)	34, 1860, 2436
BslFI	GGGAC	3 cut(s)	18, 503, 1815
BslI	CCNNNNNNNGG	7 cut(s)	198, 282, 1761, 2135, 2251, 2387, 2696
BsmAI	GTCTC	5 cut(s)	105, 624, 1178, 1752, 2629
BsmFI	GGGAC	3 cut(s)	18, 503, 1815
BsmI	GAATGC	5 cut(s)	478, 557, 845, 1822, 2598
BsnI	GGCC	4 cut(s)	330, 755, 2576, 2903
Bso31I	GGTCTC	3 cut(s)	624, 1178, 2629
Bsp1286I	GDGCHC	2 cut(s)	959, 2393
Bsp13I	TCCGGA	1 cut(s)	2435
Bsp1407I	TGTACA	1 cut(s)	1788
Bsp143I	GATC	7 cut(s)	367, 1023, 1071, 2164, 2239, 2410, 3034
BspACI	CCGC	5 cut(s)	218, 1012, 1956, 2140, 2229
BspANI	GGCC	4 cut(s)	330, 755, 2576, 2903
BspCNI	CTCAG	8 cut(s)	474, 902, 1261, 1801, 1959, 2427, 2562, 2767
BspDI	ATCGAT	1 cut(s)	1074
BspEI	TCCGGA	1 cut(s)	2435
BspFNI	CGCG	1 cut(s)	61
BspHI	TCATGA	1 cut(s)	1656
BspLI	GGNNCC	8 cut(s)	6, 22, 97, 286, 754, 1366, 1933, 2928
BspMAI	CTGCAG	2 cut(s)	354, 436
BspMI	ACCTGC	1 cut(s)	2688
BspOI	GCTAGC	1 cut(s)	3005
BspPI	GGATC	2 cut(s)	375, 1079
BspQI	GCTCTTC	1 cut(s)	1140
BspT107I	GGYRCC	4 cut(s)	20, 95, 1364, 1931
BspTI	CTTAAG	1 cut(s)	1669
BspTNI	GGTCTC	3 cut(s)	624, 1178, 2629
BsrBI	CCGCTC	1 cut(s)	2231
BsrDI	GCAATG	5 cut(s)	809, 1356, 1428, 1952, 2649
BsrFI	RCCGGY	1 cut(s)	1859
BsrGI	TGTACA	1 cut(s)	1788
BsrI	ACTGG	3 cut(s)	956, 1766, 1809
BssAI	RCCGGY	1 cut(s)	1859
BssECI	CCNNGG	5 cut(s)	91, 119, 1936, 1937, 2904
BssMI	GATC	7 cut(s)	367, 1023, 1071, 2164, 2239, 2410, 3034
BssT1I	CCWWGG	2 cut(s)	91, 119
Bst2UI	CCWGG	1 cut(s)	1938
Bst4CI	ACNGT	6 cut(s)	316, 540, 765, 861, 945, 1793
Bst6I	CTCTTC	2 cut(s)	1140, 1596
BstAFI	CTTAAG	1 cut(s)	1669
BstAUI	TGTACA	1 cut(s)	1788
BstC8I	GCNNGC	7 cut(s)	1009, 1233, 1303, 1861, 2103, 2985, 3003
BstEII	GGTNACC	2 cut(s)	973, 2675
BstENI	CCTNNNNNAGG	1 cut(s)	2133
BstF5I	GGATG	5 cut(s)	214, 1232, 2432, 2458, 2705
BstFNI	CGCG	1 cut(s)	61
BstH2I	RGCGCY	1 cut(s)	73
BstHHI	GCGC	2 cut(s)	63, 72
BstKTI	GATC	7 cut(s)	370, 1026, 1074, 2167, 2242, 2413, 3037
BstMAI	GTCTC	5 cut(s)	105, 624, 1178, 1752, 2629
BstMBI	GATC	7 cut(s)	367, 1023, 1071, 2164, 2239, 2410, 3034
BstNI	CCWGG	1 cut(s)	1938
BstPI	GGTNACC	2 cut(s)	973, 2675
BstSCI	CCNGG	1 cut(s)	1936
BstSFI	CTRYAG	3 cut(s)	350, 432, 732
BstSLI	GKGCMC	1 cut(s)	2393
BstUI	CGCG	1 cut(s)	61
BstX2I	RGATCY	1 cut(s)	367
BstXI	CCANNNNNNTGG	3 cut(s)	126, 1141, 3029
BstYI	RGATCY	1 cut(s)	367
Bsu15I	ATCGAT	1 cut(s)	1074
BsuI	GTATCC	1 cut(s)	258
BsuRI	GGCC	4 cut(s)	330, 755, 2576, 2903
BsuTUI	ATCGAT	1 cut(s)	1074
BtsCI	GGATG	5 cut(s)	214, 1232, 2432, 2458, 2705
BtsI	GCAGTG	5 cut(s)	137, 347, 2089, 2391, 2919
BveI	ACCTGC	1 cut(s)	2688
Cac8I	GCNNGC	7 cut(s)	1009, 1233, 1303, 1861, 2103, 2985, 3003
CaiI	CAGNNNCTG	2 cut(s)	1761, 2353
CciI	TCATGA	1 cut(s)	1656
CfoI	GCGC	2 cut(s)	63, 72
Cfr10I	RCCGGY	1 cut(s)	1859
Cfr13I	GGNCC	7 cut(s)	5, 163, 285, 540, 753, 2429, 2574
ClaI	ATCGAT	1 cut(s)	1074
CseI	GACGC	2 cut(s)	89, 2994
Csp6I	GTAC	5 cut(s)	600, 1365, 1789, 1932, 2744
CviQI	GTAC	5 cut(s)	600, 1365, 1789, 1932, 2744
DpnI	GATC	7 cut(s)	369, 1025, 1073, 2166, 2241, 2412, 3036
DpnII	GATC	7 cut(s)	367, 1023, 1071, 2164, 2239, 2410, 3034
DriI	GACNNNNNGTC	1 cut(s)	988
EaeI	YGGCCR	1 cut(s)	2901
Eam1104I	CTCTTC	2 cut(s)	1140, 1596
Eam1105I	GACNNNNNGTC	1 cut(s)	988
EarI	CTCTTC	2 cut(s)	1140, 1596
Ecl136II	GAGCTC	1 cut(s)	957
Eco130I	CCWWGG	2 cut(s)	91, 119
Eco24I	GRGCYC	1 cut(s)	959
Eco31I	GGTCTC	3 cut(s)	624, 1178, 2629
Eco32I	GATATC	3 cut(s)	244, 423, 2285
Eco47I	GGWCC	5 cut(s)	5, 163, 285, 540, 2429
Eco53kI	GAGCTC	1 cut(s)	957
Eco57I	CTGAAG	7 cut(s)	216, 254, 1487, 1892, 2154, 2157, 2745
Eco91I	GGTNACC	2 cut(s)	973, 2675
EcoICRI	GAGCTC	1 cut(s)	957
EcoNI	CCTNNNNNAGG	1 cut(s)	2133
EcoO109I	RGGNCCY	2 cut(s)	5, 2574
EcoO65I	GGTNACC	2 cut(s)	973, 2675
EcoRII	CCWGG	1 cut(s)	1936
EcoRV	GATATC	3 cut(s)	244, 423, 2285
EcoT14I	CCWWGG	2 cut(s)	91, 119
EcoT22I	ATGCAT	3 cut(s)	557, 809, 2532
EcoT38I	GRGCYC	1 cut(s)	959
ErhI	CCWWGG	2 cut(s)	91, 119
FalI	AAGNNNNNCTT	6 cut(s)	1764, 1796, 2127, 2159, 2289, 2321
FaqI	GGGAC	3 cut(s)	18, 503, 1815
FauNDI	CATATG	1 cut(s)	2752
FbaI	TGATCA	3 cut(s)	1023, 2164, 3034
FokI	GGATG	5 cut(s)	201, 1239, 2419, 2465, 2712
FriOI	GRGCYC	1 cut(s)	959
FspBI	CTAG	8 cut(s)	92, 627, 1443, 1847, 1895, 2148, 2654, 3002
GlaI	GCGC	2 cut(s)	62, 71
GsaI	CCCAGC	1 cut(s)	2406
GsuI	CTGGAG	1 cut(s)	973
HaeII	RGCGCY	1 cut(s)	73
HaeIII	GGCC	4 cut(s)	330, 755, 2576, 2903
HapII	CCGG	3 cut(s)	34, 1860, 2436
HgaI	GACGC	2 cut(s)	89, 2994
HhaI	GCGC	2 cut(s)	63, 72
Hin6I	GCGC	2 cut(s)	61, 70
HinP1I	GCGC	2 cut(s)	61, 70
HincII	GTYRAC	1 cut(s)	2659
HindII	GTYRAC	1 cut(s)	2659
HindIII	AAGCTT	1 cut(s)	2480
HinfI	GANTC	9 cut(s)	188, 1130, 1379, 1446, 2039, 2323, 2585, 2951, 3015
HpaII	CCGG	3 cut(s)	34, 1860, 2436
HphI	GGTGA	4 cut(s)	2234, 2266, 2969, 3044
Hpy166II	GTNNAC	4 cut(s)	1904, 2536, 2659, 2960
Hpy8I	GTNNAC	4 cut(s)	1904, 2536, 2659, 2960
Hpy99I	CGWCG	1 cut(s)	83
HpyAV	CCTTC	5 cut(s)	18, 220, 1378, 1760, 2129
HpyCH4III	ACNGT	6 cut(s)	316, 540, 765, 861, 945, 1793
HpyCH4IV	ACGT	4 cut(s)	1871, 1962, 2335, 2377
HpySE526I	ACGT	4 cut(s)	1871, 1962, 2335, 2377
HspAI	GCGC	2 cut(s)	61, 70
Kpn2I	TCCGGA	1 cut(s)	2435
KpnI	GGTACC	2 cut(s)	1368, 1935
KroI	GCCGGC	1 cut(s)	1859
KroNI	GCCGGC	1 cut(s)	1861
Ksp22I	TGATCA	3 cut(s)	1023, 2164, 3034
Kzo9I	GATC	7 cut(s)	367, 1023, 1071, 2164, 2239, 2410, 3034
LguI	GCTCTTC	1 cut(s)	1140
LmnI	GCTCC	3 cut(s)	954, 1711, 2932
LweI	GCATC	6 cut(s)	349, 637, 875, 1054, 1442, 2352
MaeI	CTAG	8 cut(s)	92, 627, 1443, 1847, 1895, 2148, 2654, 3002
MaeII	ACGT	4 cut(s)	1871, 1962, 2335, 2377
MalI	GATC	7 cut(s)	369, 1025, 1073, 2166, 2241, 2412, 3036
MbiI	CCGCTC	1 cut(s)	2231
MboI	GATC	7 cut(s)	367, 1023, 1071, 2164, 2239, 2410, 3034
MflI	RGATCY	1 cut(s)	367
MhlI	GDGCHC	2 cut(s)	959, 2393
MlyI	GAGTC	2 cut(s)	2317, 2594
MmeI	TCCRAC	1 cut(s)	2244
Mph1103I	ATGCAT	3 cut(s)	557, 809, 2532
MroI	TCCGGA	1 cut(s)	2435
MroNI	GCCGGC	1 cut(s)	1859
MroXI	GAANNNNTTC	3 cut(s)	573, 1107, 2796
MseI	TTAA	9 cut(s)	87, 375, 924, 1281, 1499, 1512, 1637, 1670, 2649
MslI	CAYNNNNRTG	4 cut(s)	101, 1139, 1300, 2529
MspCI	CTTAAG	1 cut(s)	1669
MspI	CCGG	3 cut(s)	34, 1860, 2436
MspR9I	CCNGG	1 cut(s)	1938
Mva1269I	GAATGC	5 cut(s)	478, 557, 845, 1822, 2598
MvaI	CCWGG	1 cut(s)	1938
MvnI	CGCG	1 cut(s)	61
NaeI	GCCGGC	1 cut(s)	1861
NdeI	CATATG	1 cut(s)	2752
NdeII	GATC	7 cut(s)	367, 1023, 1071, 2164, 2239, 2410, 3034
NgoMIV	GCCGGC	1 cut(s)	1859
NheI	GCTAGC	1 cut(s)	3001
NlaIV	GGNNCC	8 cut(s)	6, 22, 97, 286, 754, 1366, 1933, 2928
NmeAIII	GCCGAG	1 cut(s)	2929
NmuCI	GTSAC	4 cut(s)	310, 947, 2176, 2914
NsiI	ATGCAT	3 cut(s)	557, 809, 2532
OliI	CACNNNNGTG	1 cut(s)	101
PaeI	GCATGC	2 cut(s)	1011, 1305
PagI	TCATGA	1 cut(s)	1656
PasI	CCCWGGG	1 cut(s)	1937
PciI	ACATGT	1 cut(s)	2495
PciSI	GCTCTTC	1 cut(s)	1140
PctI	GAATGC	5 cut(s)	478, 557, 845, 1822, 2598
PdiI	GCCGGC	1 cut(s)	1861
PdmI	GAANNNNTTC	3 cut(s)	573, 1107, 2796
PfeI	GAWTC	7 cut(s)	188, 1130, 1379, 1446, 2039, 2951, 3015
PflMI	CCANNNNNTGG	2 cut(s)	1761, 2251
PleI	GAGTC	2 cut(s)	2317, 2593
PpsI	GAGTC	2 cut(s)	2317, 2593
PpuMI	RGGWCCY	1 cut(s)	5
PscI	ACATGT	1 cut(s)	2495
PshBI	ATTAAT	1 cut(s)	375
PsiI	TTATAA	1 cut(s)	683
Psp124BI	GAGCTC	1 cut(s)	959
Psp1406I	AACGTT	1 cut(s)	2335
Psp5II	RGGWCCY	1 cut(s)	5
Psp6I	CCWGG	1 cut(s)	1936
PspEI	GGTNACC	2 cut(s)	973, 2675
PspFI	CCCAGC	1 cut(s)	2402
PspGI	CCWGG	1 cut(s)	1936
PspN4I	GGNNCC	8 cut(s)	6, 22, 97, 286, 754, 1366, 1933, 2928
PspPI	GGNCC	7 cut(s)	5, 163, 285, 540, 753, 2429, 2574
PspPPI	RGGWCCY	1 cut(s)	5
PstI	CTGCAG	2 cut(s)	354, 436
PstNI	CAGNNNCTG	2 cut(s)	1761, 2353
PsuI	RGATCY	1 cut(s)	367
RsaI	GTAC	5 cut(s)	601, 1366, 1790, 1933, 2745
RsaNI	GTAC	5 cut(s)	600, 1365, 1789, 1932, 2744
RseI	CAYNNNNRTG	4 cut(s)	101, 1139, 1300, 2529
SacI	GAGCTC	1 cut(s)	959
SapI	GCTCTTC	1 cut(s)	1140
SaqAI	TTAA	9 cut(s)	87, 375, 924, 1281, 1499, 1512, 1637, 1670, 2649
Sau3AI	GATC	7 cut(s)	367, 1023, 1071, 2164, 2239, 2410, 3034
Sau96I	GGNCC	7 cut(s)	5, 163, 285, 540, 753, 2429, 2574
SchI	GAGTC	2 cut(s)	2317, 2594
ScrFI	CCNGG	1 cut(s)	1938
SduI	GDGCHC	2 cut(s)	959, 2393
SfaNI	GCATC	6 cut(s)	349, 637, 875, 1054, 1442, 2352
SfcI	CTRYAG	3 cut(s)	350, 432, 732
SinI	GGWCC	5 cut(s)	5, 163, 285, 540, 2429
SmiMI	CAYNNNNRTG	4 cut(s)	101, 1139, 1300, 2529
SmlI	CTYRAG	2 cut(s)	519, 1669
SmoI	CTYRAG	2 cut(s)	519, 1669
SpeI	ACTAGT	2 cut(s)	1894, 2653
SphI	GCATGC	2 cut(s)	1011, 1305
SsiI	CCGC	5 cut(s)	218, 1012, 1956, 2140, 2229
SspI	AATATT	2 cut(s)	572, 1108
SspMI	CTAG	8 cut(s)	92, 627, 1443, 1847, 1895, 2148, 2654, 3002
SstI	GAGCTC	1 cut(s)	959
StyD4I	CCNGG	1 cut(s)	1936
StyI	CCWWGG	2 cut(s)	91, 119
TaaI	ACNGT	6 cut(s)	316, 540, 765, 861, 945, 1793
TaiI	ACGT	4 cut(s)	1874, 1965, 2338, 2380
TaqI	TCGA	5 cut(s)	186, 1074, 2238, 2964, 3013
TatI	WGTACW	2 cut(s)	599, 1788
TauI	GCSGC	2 cut(s)	1014, 2143
TfiI	GAWTC	7 cut(s)	188, 1130, 1379, 1446, 2039, 2951, 3015
Tru1I	TTAA	9 cut(s)	87, 375, 924, 1281, 1499, 1512, 1637, 1670, 2649
Tru9I	TTAA	9 cut(s)	87, 375, 924, 1281, 1499, 1512, 1637, 1670, 2649
TseFI	GTSAC	4 cut(s)	310, 947, 2176, 2914
Tsp45I	GTSAC	4 cut(s)	310, 947, 2176, 2914
TspGWI	ACGGA	1 cut(s)	181
Van91I	CCANNNNNTGG	2 cut(s)	1761, 2251
Vha464I	CTTAAG	1 cut(s)	1669
VpaK11BI	GGWCC	5 cut(s)	5, 163, 285, 540, 2429
VspI	ATTAAT	1 cut(s)	375
XagI	CCTNNNNNAGG	1 cut(s)	2133
XapI	RAATTY	2 cut(s)	1080, 1531
XcmI	CCANNNNNNNNNTGG	1 cut(s)	295
XmaJI	CCTAGG	1 cut(s)	91
XmnI	GAANNNNTTC	3 cut(s)	573, 1107, 2796
XspI	CTAG	8 cut(s)	92, 627, 1443, 1847, 1895, 2148, 2654, 3002
Zsp2I	ATGCAT	3 cut(s)	557, 809, 2532

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.