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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G05894 AT2G31480 |
| prunus_persica | Prupe.1G190600_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr4g0407081 |
| rosa_laevigata | RLG00000008738 |
| rosa_multiflora | Rmu_sc0000600.1_g000001 |
| rosa_roxburghii | Rroxscaffold_5G00351810 |
| rosa_rugosa | Rorug04G0077900 |
| rosa_samantha | Rh4AG142600 Rh4BG140500 Rh4CG149100 Rh4DG136700 |
| rosa_wichuraiana | Rw4G011620 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 3 cut(s) | 166, 351, 887 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 212 |
| AciI | CCGC | 2 cut(s) | 788, 1225 |
| AclWI | GGATC | 3 cut(s) | 34, 206, 906 |
| AcoI | YGGCCR | 1 cut(s) | 797 |
| AcsI | RAATTY | 1 cut(s) | 1334 |
| AcuI | CTGAAG | 2 cut(s) | 306, 600 |
| AfaI | GTAC | 2 cut(s) | 622, 1149 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 212 |
| AflIII | ACRYGT | 1 cut(s) | 1133 |
| AgsI | TTSAA | 9 cut(s) | 143, 609, 632, 841, 880, 985, 1140, 1157, 1309 |
| AluBI | AGCT | 7 cut(s) | 291, 603, 903, 976, 1021, 1208, 1216 |
| AluI | AGCT | 7 cut(s) | 291, 603, 903, 976, 1021, 1208, 1216 |
| Alw21I | GWGCWC | 2 cut(s) | 925, 1023 |
| AlwI | GGATC | 3 cut(s) | 34, 206, 906 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 131, 1080 |
| Ama87I | CYCGRG | 2 cut(s) | 487, 1123 |
| AoxI | GGCC | 2 cut(s) | 797, 988 |
| ApeKI | GCWGC | 2 cut(s) | 1004, 1178 |
| ApoI | RAATTY | 1 cut(s) | 1334 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 516, 845, 1271 |
| AspS9I | GGNCC | 1 cut(s) | 989 |
| AsuHPI | GGTGA | 3 cut(s) | 547, 849, 1313 |
| AvaI | CYCGRG | 2 cut(s) | 487, 1123 |
| AxyI | CCTNAGG | 1 cut(s) | 828 |
| BalI | TGGCCA | 1 cut(s) | 799 |
| BanII | GRGCYC | 2 cut(s) | 1023, 1071 |
| BbsI | GAAGAC | 1 cut(s) | 1254 |
| Bbv12I | GWGCWC | 2 cut(s) | 925, 1023 |
| BbvI | GCAGC | 2 cut(s) | 1016, 1190 |
| BccI | CCATC | 4 cut(s) | 17, 685, 953, 1079 |
| BceAI | ACGGC | 2 cut(s) | 714, 1090 |
| BfaI | CTAG | 2 cut(s) | 947, 1209 |
| BfmI | CTRYAG | 1 cut(s) | 894 |
| BfuAI | ACCTGC | 3 cut(s) | 166, 351, 887 |
| BglII | AGATCT | 1 cut(s) | 949 |
| BisI | GCNGC | 3 cut(s) | 788, 1005, 1179 |
| BlsI | GCNGC | 3 cut(s) | 789, 1006, 1180 |
| BmeT110I | CYCGRG | 2 cut(s) | 487, 1123 |
| BmgT120I | GGNCC | 1 cut(s) | 989 |
| BmsI | GCATC | 2 cut(s) | 341, 1065 |
| BpiI | GAAGAC | 1 cut(s) | 1254 |
| BpuEI | CTTGAG | 1 cut(s) | 371 |
| Bsa29I | ATCGAT | 1 cut(s) | 249 |
| BsaBI | GATNNNNATC | 1 cut(s) | 118 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 915, 945 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 212 |
| Bse21I | CCTNAGG | 1 cut(s) | 828 |
| Bse8I | GATNNNNATC | 1 cut(s) | 118 |
| BseCI | ATCGAT | 1 cut(s) | 249 |
| BseGI | GGATG | 1 cut(s) | 736 |
| BseJI | GATNNNNATC | 1 cut(s) | 118 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 212 |
| BseMII | CTCAG | 2 cut(s) | 590, 819 |
| BseRI | GAGGAG | 1 cut(s) | 655 |
| BseXI | GCAGC | 2 cut(s) | 1016, 1190 |
| BsgI | GTGCAG | 1 cut(s) | 762 |
| BshFI | GGCC | 2 cut(s) | 799, 990 |
| BshVI | ATCGAT | 1 cut(s) | 249 |
| BsiHKAI | GWGCWC | 2 cut(s) | 925, 1023 |
| BsiHKCI | CYCGRG | 2 cut(s) | 487, 1123 |
| BslFI | GGGAC | 2 cut(s) | 274, 462 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 212 |
| BsmFI | GGGAC | 2 cut(s) | 274, 462 |
| BsmI | GAATGC | 3 cut(s) | 88, 511, 886 |
| BsnI | GGCC | 2 cut(s) | 799, 990 |
| BsoBI | CYCGRG | 2 cut(s) | 487, 1123 |
| Bsp1286I | GDGCHC | 3 cut(s) | 925, 1023, 1071 |
| Bsp143I | GATC | 8 cut(s) | 26, 113, 198, 246, 253, 682, 911, 949 |
| BspACI | CCGC | 2 cut(s) | 788, 1225 |
| BspANI | GGCC | 2 cut(s) | 799, 990 |
| BspCNI | CTCAG | 2 cut(s) | 589, 820 |
| BspDI | ATCGAT | 1 cut(s) | 249 |
| BspMAI | CTGCAG | 1 cut(s) | 898 |
| BspMI | ACCTGC | 3 cut(s) | 166, 351, 887 |
| BspPI | GGATC | 3 cut(s) | 34, 206, 906 |
| BssMI | GATC | 8 cut(s) | 26, 113, 198, 246, 253, 682, 911, 949 |
| Bst4CI | ACNGT | 2 cut(s) | 476, 559 |
| Bst6I | CTCTTC | 3 cut(s) | 38, 351, 1082 |
| BstDEI | CTNAG | 4 cut(s) | 30, 576, 759, 828 |
| BstF5I | GGATG | 1 cut(s) | 736 |
| BstKTI | GATC | 8 cut(s) | 29, 116, 201, 249, 256, 685, 914, 952 |
| BstMBI | GATC | 8 cut(s) | 26, 113, 198, 246, 253, 682, 911, 949 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 796, 1187 |
| BstNSI | RCATGY | 1 cut(s) | 1137 |
| BstSFI | CTRYAG | 1 cut(s) | 894 |
| BstV1I | GCAGC | 2 cut(s) | 1016, 1190 |
| BstV2I | GAAGAC | 1 cut(s) | 1254 |
| BstX2I | RGATCY | 3 cut(s) | 26, 911, 949 |
| BstYI | RGATCY | 3 cut(s) | 26, 911, 949 |
| Bsu15I | ATCGAT | 1 cut(s) | 249 |
| Bsu36I | CCTNAGG | 1 cut(s) | 828 |
| BsuRI | GGCC | 2 cut(s) | 799, 990 |
| BsuTUI | ATCGAT | 1 cut(s) | 249 |
| BtsCI | GGATG | 1 cut(s) | 736 |
| BtsI | GCAGTG | 2 cut(s) | 772, 1296 |
| BtsIMutI | CAGTG | 2 cut(s) | 772, 1296 |
| BveI | ACCTGC | 3 cut(s) | 166, 351, 887 |
| CaiI | CAGNNNCTG | 2 cut(s) | 131, 1080 |
| Cfr13I | GGNCC | 1 cut(s) | 989 |
| ClaI | ATCGAT | 1 cut(s) | 249 |
| Csp6I | GTAC | 2 cut(s) | 621, 1148 |
| CviAII | CATG | 5 cut(s) | 67, 148, 644, 916, 1134 |
| CviQI | GTAC | 2 cut(s) | 621, 1148 |
| DdeI | CTNAG | 4 cut(s) | 30, 576, 759, 828 |
| DpnI | GATC | 8 cut(s) | 28, 115, 200, 248, 255, 684, 913, 951 |
| DpnII | GATC | 8 cut(s) | 26, 113, 198, 246, 253, 682, 911, 949 |
| EaeI | YGGCCR | 1 cut(s) | 797 |
| Eam1104I | CTCTTC | 3 cut(s) | 38, 351, 1082 |
| EarI | CTCTTC | 3 cut(s) | 38, 351, 1082 |
| Ecl136II | GAGCTC | 1 cut(s) | 1021 |
| Eco24I | GRGCYC | 2 cut(s) | 1023, 1071 |
| Eco53kI | GAGCTC | 1 cut(s) | 1021 |
| Eco57I | CTGAAG | 2 cut(s) | 306, 600 |
| Eco81I | CCTNAGG | 1 cut(s) | 828 |
| Eco88I | CYCGRG | 2 cut(s) | 487, 1123 |
| EcoICRI | GAGCTC | 1 cut(s) | 1021 |
| EcoT38I | GRGCYC | 2 cut(s) | 1023, 1071 |
| FaeI | CATG | 5 cut(s) | 70, 151, 647, 919, 1137 |
| FaqI | GGGAC | 2 cut(s) | 274, 462 |
| FatI | CATG | 5 cut(s) | 66, 147, 643, 915, 1133 |
| FauNDI | CATATG | 1 cut(s) | 802 |
| Fnu4HI | GCNGC | 3 cut(s) | 788, 1005, 1179 |
| FokI | GGATG | 1 cut(s) | 743 |
| FriOI | GRGCYC | 2 cut(s) | 1023, 1071 |
| Fsp4HI | GCNGC | 3 cut(s) | 788, 1005, 1179 |
| FspBI | CTAG | 2 cut(s) | 947, 1209 |
| GluI | GCNGC | 3 cut(s) | 788, 1005, 1179 |
| HaeIII | GGCC | 2 cut(s) | 799, 990 |
| Hin1II | CATG | 5 cut(s) | 70, 151, 647, 919, 1137 |
| HindIII | AAGCTT | 3 cut(s) | 289, 601, 974 |
| HphI | GGTGA | 3 cut(s) | 547, 849, 1313 |
| Hpy166II | GTNNAC | 3 cut(s) | 95, 584, 623 |
| Hpy188III | TCNNGA | 9 cut(s) | 350, 452, 487, 636, 716, 728, 1016, 1060, 1075 |
| Hpy8I | GTNNAC | 3 cut(s) | 95, 584, 623 |
| HpyAV | CCTTC | 1 cut(s) | 231 |
| HpyCH4III | ACNGT | 2 cut(s) | 476, 559 |
| HpyCH4V | TGCA | 8 cut(s) | 86, 161, 332, 509, 743, 896, 1163, 1178 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 796, 1187 |
| HpyF3I | CTNAG | 4 cut(s) | 30, 576, 759, 828 |
| Hsp92II | CATG | 5 cut(s) | 70, 151, 647, 919, 1137 |
| Kzo9I | GATC | 8 cut(s) | 26, 113, 198, 246, 253, 682, 911, 949 |
| Lsp1109I | GCAGC | 2 cut(s) | 1016, 1190 |
| LweI | GCATC | 2 cut(s) | 341, 1065 |
| MaeI | CTAG | 2 cut(s) | 947, 1209 |
| MaeIII | GTNAC | 2 cut(s) | 181, 855 |
| MalI | GATC | 8 cut(s) | 28, 115, 200, 248, 255, 684, 913, 951 |
| MboI | GATC | 8 cut(s) | 26, 113, 198, 246, 253, 682, 911, 949 |
| MflI | RGATCY | 3 cut(s) | 26, 911, 949 |
| MhlI | GDGCHC | 3 cut(s) | 925, 1023, 1071 |
| MlsI | TGGCCA | 1 cut(s) | 799 |
| MluCI | AATT | 2 cut(s) | 872, 1334 |
| MluNI | TGGCCA | 1 cut(s) | 799 |
| MmeI | TCCRAC | 1 cut(s) | 1224 |
| MnlI | CCTC | 8 cut(s) | 63, 144, 346, 676, 823, 870, 1083, 1312 |
| Mox20I | TGGCCA | 1 cut(s) | 799 |
| MroXI | GAANNNNTTC | 3 cut(s) | 516, 845, 1271 |
| MscI | TGGCCA | 1 cut(s) | 799 |
| MseI | TTAA | 5 cut(s) | 468, 954, 995, 1338, 1372 |
| Msp20I | TGGCCA | 1 cut(s) | 799 |
| Mva1269I | GAATGC | 3 cut(s) | 88, 511, 886 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 796, 1187 |
| NdeI | CATATG | 1 cut(s) | 802 |
| NdeII | GATC | 8 cut(s) | 26, 113, 198, 246, 253, 682, 911, 949 |
| NlaIII | CATG | 5 cut(s) | 70, 151, 647, 919, 1137 |
| NmuCI | GTSAC | 2 cut(s) | 181, 855 |
| NspI | RCATGY | 1 cut(s) | 1137 |
| PaeR7I | CTCGAG | 1 cut(s) | 1123 |
| PciI | ACATGT | 1 cut(s) | 1133 |
| PctI | GAATGC | 3 cut(s) | 88, 511, 886 |
| PdmI | GAANNNNTTC | 3 cut(s) | 516, 845, 1271 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 212 |
| PkrI | GCNGC | 3 cut(s) | 789, 1006, 1180 |
| PscI | ACATGT | 1 cut(s) | 1133 |
| Psp124BI | GAGCTC | 1 cut(s) | 1023 |
| PspPI | GGNCC | 1 cut(s) | 989 |
| PspXI | VCTCGAGB | 1 cut(s) | 1123 |
| PstI | CTGCAG | 1 cut(s) | 898 |
| PstNI | CAGNNNCTG | 2 cut(s) | 131, 1080 |
| PsuI | RGATCY | 3 cut(s) | 26, 911, 949 |
| RsaI | GTAC | 2 cut(s) | 622, 1149 |
| RsaNI | GTAC | 2 cut(s) | 621, 1148 |
| SacI | GAGCTC | 1 cut(s) | 1023 |
| SaqAI | TTAA | 5 cut(s) | 468, 954, 995, 1338, 1372 |
| SatI | GCNGC | 3 cut(s) | 788, 1005, 1179 |
| Sau3AI | GATC | 8 cut(s) | 26, 113, 198, 246, 253, 682, 911, 949 |
| Sau96I | GGNCC | 1 cut(s) | 989 |
| SduI | GDGCHC | 3 cut(s) | 925, 1023, 1071 |
| SfaNI | GCATC | 2 cut(s) | 341, 1065 |
| SfcI | CTRYAG | 1 cut(s) | 894 |
| Sfr274I | CTCGAG | 1 cut(s) | 1123 |
| SlaI | CTCGAG | 1 cut(s) | 1123 |
| SmlI | CTYRAG | 2 cut(s) | 350, 1123 |
| SmoI | CTYRAG | 2 cut(s) | 350, 1123 |
| Sse9I | AATT | 2 cut(s) | 872, 1334 |
| SsiI | CCGC | 2 cut(s) | 788, 1225 |
| SspI | AATATT | 1 cut(s) | 517 |
| SspMI | CTAG | 2 cut(s) | 947, 1209 |
| SstI | GAGCTC | 1 cut(s) | 1023 |
| TaaI | ACNGT | 2 cut(s) | 476, 559 |
| TaqI | TCGA | 6 cut(s) | 116, 249, 780, 862, 1124, 1359 |
| TasI | AATT | 2 cut(s) | 872, 1334 |
| TauI | GCSGC | 1 cut(s) | 790 |
| Tru1I | TTAA | 5 cut(s) | 468, 954, 995, 1338, 1372 |
| Tru9I | TTAA | 5 cut(s) | 468, 954, 995, 1338, 1372 |
| TscAI | CASTG | 2 cut(s) | 772, 1296 |
| TseFI | GTSAC | 2 cut(s) | 181, 855 |
| TseI | GCWGC | 2 cut(s) | 1004, 1178 |
| Tsp45I | GTSAC | 2 cut(s) | 181, 855 |
| TspDTI | ATGAA | 5 cut(s) | 30, 45, 522, 819, 1280 |
| TspRI | CASTG | 2 cut(s) | 772, 1296 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 212 |
| XapI | RAATTY | 1 cut(s) | 1334 |
| XceI | RCATGY | 1 cut(s) | 1137 |
| XhoI | CTCGAG | 1 cut(s) | 1123 |
| XmnI | GAANNNNTTC | 3 cut(s) | 516, 845, 1271 |
| XspI | CTAG | 2 cut(s) | 947, 1209 |