AT1G08320
BZIP Family

transcription factor

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
Physical Location & Seq
Reverse (-)
2621860 .. 2628594
6735 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G08320.4

Sequence Viewer

Length: 1446 bp
ATGGCGAACCATAGAATGAGCGAAGCTACAAACCATAACCACAATCATCATCTTCCTTATTCACTTATTCATGGTCTCAACAACAATCATCCATCTTCTGGTTTCATTAACCAAGATGGATCGTCCAGTTTCGATTTTGGAGAGCTAGAAGAAGCAATTGTTCTGCAAGGTGTCAAGTATAGGAACGAGGAAGCCAAGCCACCTTTATTAGGAGGAGGAGGAGGAGCTACGACTCTGGAGATGTTCCCTTCGTGGCCAATCAGAACTCACCAAACTCTTCCTACTGAGAGTTCCAAGTCAGGAGGAGAGAGCAGCGATTCAGGATCGGCTAATTTCTCCGGCAAAGCTGAAAGTCAACAACCGGAGTCTCCTATGAGTAGCAAACATCATCTCATGCTTCAACCTCATCATAATAACATGGCAAACTCAAGTTCAACATCTGGACTTCCTTCCACTTCTCGAACTTTAGCTCCTCCTAAACCTTCGGAAGATAAGAGGAAGGCTACAACTTCAGGCAAACAGCTTGATGCTAAGACGTTGAGACGTTTGGCCCAAAATAGAGAAGCTGCTCGCAAAAGCCGTCTTAGGAAAAAGGCGTATGTGCAACAGCTAGAATCAAGTAGGATAAAGCTTTCCCAATTGGAGCAAGAACTTCAGCGAGCTCGTTCTCAGGGGCTGTTCATGGGTGGTTGTGGACCACCAGGACCTAACATCACTTCCGGAGCTGCAATATTTGACATGGAATATGGGAGATGGCTAGAGGATGATAACCGGCATATGTCGGAGATTCGAACCGGTCTTCAGGCTCATTTATCTGACAATGATTTAAGGTTGATCGTTGACGGTTACATTGCTCATTTTGATGAGATATTCCGATTAAAAGCCGTGGCAGCGAAAGCCGATGTTTTTCACCTCATCATTGGGACATGGATGTCCCCAGCCGAACGTTGTTTTATTTGGATGGCTGGTTTCCGTCCATCCGACCTAATCAAGATATTGGTGTCGCAAATGGATCTATTGACGGAGCAACAACTGATGGGAATATATAGCCTACAACACTCGTCGCAACAAGCAGAGGAGGCTCTCTCGCAAGGCCTCGAACAACTTCAGCAATCTCTCATCGATACTCTCGCCGCATCTCCAGTCATTGACGGAATGCAACAAATGGCTGTCGCTCTCGGAAAGATCTCTAATCTCGAAGGCTTTATCCGCCAGGCTGATAACTTGAGGCAGCAGACCGTTCACCAGCTGAGGCGGATCTTGACCGTCCGACAAGCTGCACGGTGTTTCCTAGTCATCGGAGAGTACTATGGACGGCTCAGAGCTCTTAGCTCCCTTTGGTTGTCACGCCCACGAGAGACACTGATGAGTGATGAAACCTCTTGTCAAACGACGACGGATTTGCAGATTGTTCAGTCATCTCGGAACCACTTCTCCAATTTCTGA

Protein Analysis

481

Amino Acids

53.51

Weight (kDa)

7.82

Isoelectric Point (pI)

64.63

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
bZIP_2 PF07716 176 - 219 1e-05 Basic region leucine zipper
bZIP_1 PF00170 177 - 218 3.1e-07 bZIP transcription factor
DOG1 PF14144 259 - 335 2.6e-29 Seed dormancy control
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 931
AccB7I CCANNNNNTGG 1 cut(s) 98
AccIII TCCGGA 1 cut(s) 719
AciI CCGC 3 cut(s) 1134, 1210, 1255
AclI AACGTT 1 cut(s) 946
AclWI GGATC 4 cut(s) 127, 331, 1020, 1265
AcoI YGGCCR 1 cut(s) 254
AcuI CTGAAG 4 cut(s) 495, 638, 785, 1091
AfaI GTAC 1 cut(s) 1307
AfiI CCNNNNNNNGG 2 cut(s) 98, 209
AgeI ACCGGT 1 cut(s) 794
AgsI TTSAA 2 cut(s) 401, 435
AjnI CCWGG 2 cut(s) 700, 1212
AloI GAACNNNNNNTCC 3 cut(s) 454, 486, 1418
Alw21I GWGCWC 2 cut(s) 664, 1327
Alw26I GTCTC 4 cut(s) 80, 372, 535, 1352
AlwI GGATC 4 cut(s) 127, 331, 1020, 1265
AlwNI CAGNNNCTG 1 cut(s) 676
Aor13HI TCCGGA 1 cut(s) 719
AoxI GGCC 3 cut(s) 254, 549, 1093
ApeKI GCWGC 6 cut(s) 312, 566, 725, 890, 1231, 1277
ArsI GACNNNNNNTTYG 2 cut(s) 1384, 1416
AsiGI ACCGGT 1 cut(s) 794
Asp700I GAANNNNTTC 2 cut(s) 1104, 1430
AspS9I GGNCC 3 cut(s) 550, 695, 704
AsuHPI GGTGA 3 cut(s) 260, 902, 1235
AsuII TTCGAA 1 cut(s) 790
AvaII GGWCC 2 cut(s) 695, 704
BalI TGGCCA 1 cut(s) 256
BanII GRGCYC 2 cut(s) 664, 1327
BauI CACGAG 1 cut(s) 1353
BbsI GAAGAC 1 cut(s) 791
Bbv12I GWGCWC 2 cut(s) 664, 1327
BbvCI CCTCAGC 1 cut(s) 1250
BbvI GCAGC 6 cut(s) 324, 553, 712, 902, 1243, 1264
BccI CCATC 6 cut(s) 100, 110, 747, 955, 985, 1030
BceAI ACGGC 3 cut(s) 564, 869, 1331
BcgI CGANNNNNNTGC 2 cut(s) 1384, 1418
BciT130I CCWGG 2 cut(s) 702, 1214
BcoDI GTCTC 4 cut(s) 80, 372, 535, 1352
BfaI CTAG 4 cut(s) 146, 611, 758, 1292
BglII AGATCT 1 cut(s) 1185
BisI GCNGC 7 cut(s) 313, 567, 726, 891, 1134, 1232, 1278
BlsI GCNGC 7 cut(s) 314, 568, 727, 892, 1135, 1233, 1279
BmcAI AGTACT 1 cut(s) 1307
Bme1390I CCNGG 2 cut(s) 702, 1214
Bme18I GGWCC 2 cut(s) 695, 704
BmgT120I GGNCC 3 cut(s) 550, 695, 704
BmiI GGNNCC 1 cut(s) 1427
BmrFI CCNGG 2 cut(s) 702, 1214
BmsI GCATC 2 cut(s) 517, 1145
BpiI GAAGAC 1 cut(s) 791
BplI GAGNNNNNCTC 2 cut(s) 1070, 1102
BpmI CTGGAG 2 cut(s) 257, 1125
Bpu10I CCTNAGC 1 cut(s) 1250
Bpu14I TTCGAA 1 cut(s) 790
BpuEI CTTGAG 2 cut(s) 412, 1246
Bsa29I ATCGAT 1 cut(s) 1122
BsaI GGTCTC 1 cut(s) 80
BsaJI CCNNGG 1 cut(s) 885
BsaWI WCCGGW 3 cut(s) 361, 719, 794
BsaXI ACNNNNNCTCC 3 cut(s) 454, 484, 1418
Bsc4I CCNNNNNNNGG 2 cut(s) 98, 209
Bse118I RCCGGY 2 cut(s) 771, 794
Bse1I ACTGG 2 cut(s) 126, 1142
Bse3DI GCAATG 1 cut(s) 849
BseAI TCCGGA 1 cut(s) 719
BseBI CCWGG 2 cut(s) 702, 1214
BseCI ATCGAT 1 cut(s) 1122
BseDI CCNNGG 1 cut(s) 885
BseGI GGATG 5 cut(s) 88, 769, 936, 966, 977
BseLI CCNNNNNNNGG 2 cut(s) 98, 209
BseMI GCAATG 1 cut(s) 849
BseMII CTCAG 4 cut(s) 276, 683, 1241, 1333
BseNI ACTGG 2 cut(s) 126, 1142
BseRI GAGGAG 7 cut(s) 228, 231, 234, 237, 318, 462, 1091
BseXI GCAGC 6 cut(s) 324, 553, 712, 902, 1243, 1264
BseYI CCCAGC 1 cut(s) 937
BsgI GTGCAG 1 cut(s) 1263
BshFI GGCC 3 cut(s) 256, 551, 1095
BshTI ACCGGT 1 cut(s) 794
BshVI ATCGAT 1 cut(s) 1122
BsiHKAI GWGCWC 2 cut(s) 664, 1327
BsiSI CCGG 5 cut(s) 339, 362, 720, 772, 795
BslFI GGGAC 2 cut(s) 919, 937
BslI CCNNNNNNNGG 2 cut(s) 98, 209
BsmAI GTCTC 4 cut(s) 80, 372, 535, 1352
BsmBI CGTCTC 1 cut(s) 535
BsmFI GGGAC 2 cut(s) 919, 937
BsmI GAATGC 1 cut(s) 1161
BsnI GGCC 3 cut(s) 256, 551, 1095
Bso31I GGTCTC 1 cut(s) 80
Bsp119I TTCGAA 1 cut(s) 790
Bsp1286I GDGCHC 2 cut(s) 664, 1327
Bsp13I TCCGGA 1 cut(s) 719
Bsp143I GATC 6 cut(s) 119, 323, 834, 1012, 1185, 1257
BspACI CCGC 3 cut(s) 1134, 1210, 1255
BspANI GGCC 3 cut(s) 256, 551, 1095
BspCNI CTCAG 4 cut(s) 277, 682, 1242, 1332
BspDI ATCGAT 1 cut(s) 1122
BspEI TCCGGA 1 cut(s) 719
BspLI GGNNCC 1 cut(s) 1427
BspPI GGATC 4 cut(s) 127, 331, 1020, 1265
BspT104I TTCGAA 1 cut(s) 790
BspTNI GGTCTC 1 cut(s) 80
BsrDI GCAATG 1 cut(s) 849
BsrFI RCCGGY 2 cut(s) 771, 794
BsrI ACTGG 2 cut(s) 126, 1142
BssAI RCCGGY 2 cut(s) 771, 794
BssECI CCNNGG 1 cut(s) 885
BssMI GATC 6 cut(s) 119, 323, 834, 1012, 1185, 1257
BssSI CACGAG 1 cut(s) 1353
Bst2BI CACGAG 1 cut(s) 1353
Bst2UI CCWGG 2 cut(s) 702, 1214
Bst4CI ACNGT 4 cut(s) 845, 1240, 1267, 1284
Bst6I CTCTTC 1 cut(s) 282
BstBI TTCGAA 1 cut(s) 790
BstC8I GCNNGC 2 cut(s) 571, 660
BstDEI CTNAG 7 cut(s) 285, 531, 584, 669, 1250, 1319, 1328
BstDSI CCRYGG 1 cut(s) 885
BstENI CCTNNNNNAGG 1 cut(s) 207
BstF5I GGATG 5 cut(s) 88, 769, 936, 966, 977
BstKTI GATC 6 cut(s) 122, 326, 837, 1015, 1188, 1260
BstMAI GTCTC 4 cut(s) 80, 372, 535, 1352
BstMBI GATC 6 cut(s) 119, 323, 834, 1012, 1185, 1257
BstMWI GCNNNNNNNGC 4 cut(s) 890, 896, 1079, 1209
BstNI CCWGG 2 cut(s) 702, 1214
BstSCI CCNGG 2 cut(s) 700, 1212
BstV1I GCAGC 6 cut(s) 324, 553, 712, 902, 1243, 1264
BstV2I GAAGAC 1 cut(s) 791
BstX2I RGATCY 3 cut(s) 1012, 1185, 1257
BstYI RGATCY 3 cut(s) 1012, 1185, 1257
Bsu15I ATCGAT 1 cut(s) 1122
BsuRI GGCC 3 cut(s) 256, 551, 1095
BsuTUI ATCGAT 1 cut(s) 1122
BtgI CCRYGG 1 cut(s) 885
BtsCI GGATG 5 cut(s) 88, 769, 936, 966, 977
BtsIMutI CAGTG 1 cut(s) 1361
Cac8I GCNNGC 2 cut(s) 571, 660
CaiI CAGNNNCTG 1 cut(s) 676
Cfr10I RCCGGY 2 cut(s) 771, 794
Cfr13I GGNCC 3 cut(s) 550, 695, 704
ClaI ATCGAT 1 cut(s) 1122
Csp6I GTAC 1 cut(s) 1306
CspAI ACCGGT 1 cut(s) 794
CviAII CATG 6 cut(s) 71, 394, 418, 682, 739, 927
CviQI GTAC 1 cut(s) 1306
DdeI CTNAG 7 cut(s) 285, 531, 584, 669, 1250, 1319, 1328
DpnI GATC 6 cut(s) 121, 325, 836, 1014, 1187, 1259
DpnII GATC 6 cut(s) 119, 323, 834, 1012, 1185, 1257
DrdI GACNNNNNNGTC 1 cut(s) 931
DseDI GACNNNNNNGTC 1 cut(s) 931
EaeI YGGCCR 1 cut(s) 254
Eam1104I CTCTTC 1 cut(s) 282
EarI CTCTTC 1 cut(s) 282
EciI GGCGGA 2 cut(s) 1199, 1270
Ecl136II GAGCTC 2 cut(s) 662, 1325
Eco147I AGGCCT 1 cut(s) 1095
Eco24I GRGCYC 2 cut(s) 664, 1327
Eco31I GGTCTC 1 cut(s) 80
Eco47I GGWCC 2 cut(s) 695, 704
Eco53kI GAGCTC 2 cut(s) 662, 1325
Eco57I CTGAAG 4 cut(s) 495, 638, 785, 1091
EcoICRI GAGCTC 2 cut(s) 662, 1325
EcoNI CCTNNNNNAGG 1 cut(s) 207
EcoO109I RGGNCCY 1 cut(s) 704
EcoRII CCWGG 2 cut(s) 700, 1212
EcoT38I GRGCYC 2 cut(s) 664, 1327
Esp3I CGTCTC 1 cut(s) 535
FaeI CATG 6 cut(s) 74, 397, 421, 685, 742, 930
FaqI GGGAC 2 cut(s) 919, 937
FatI CATG 6 cut(s) 70, 393, 417, 681, 738, 926
FauNDI CATATG 1 cut(s) 777
Fnu4HI GCNGC 7 cut(s) 313, 567, 726, 891, 1134, 1232, 1278
FokI GGATG 5 cut(s) 75, 776, 943, 964, 973
FriOI GRGCYC 2 cut(s) 664, 1327
Fsp4HI GCNGC 7 cut(s) 313, 567, 726, 891, 1134, 1232, 1278
FspBI CTAG 4 cut(s) 146, 611, 758, 1292
GluI GCNGC 7 cut(s) 313, 567, 726, 891, 1134, 1232, 1278
GsaI CCCAGC 1 cut(s) 941
GsuI CTGGAG 2 cut(s) 257, 1125
HaeIII GGCC 3 cut(s) 256, 551, 1095
HapII CCGG 5 cut(s) 339, 362, 720, 772, 795
Hin1II CATG 6 cut(s) 74, 397, 421, 685, 742, 930
HincII GTYRAC 2 cut(s) 356, 841
HindII GTYRAC 2 cut(s) 356, 841
HindIII AAGCTT 1 cut(s) 629
HinfI GANTC 5 cut(s) 232, 317, 365, 614, 787
HpaII CCGG 5 cut(s) 339, 362, 720, 772, 795
HphI GGTGA 3 cut(s) 260, 902, 1235
Hpy166II GTNNAC 4 cut(s) 356, 695, 841, 1243
Hpy188III TCNNGA 9 cut(s) 236, 300, 321, 441, 459, 720, 991, 1196, 1261
Hpy8I GTNNAC 4 cut(s) 356, 695, 841, 1243
Hpy99I CGWCG 3 cut(s) 1066, 1396, 1399
HpyAV CCTTC 5 cut(s) 258, 459, 492, 493, 1193
HpyCH4III ACNGT 4 cut(s) 845, 1240, 1267, 1284
HpyCH4IV ACGT 3 cut(s) 536, 544, 946
HpyCH4V TGCA 6 cut(s) 166, 604, 728, 1159, 1280, 1405
HpyF10VI GCNNNNNNNGC 4 cut(s) 890, 896, 1079, 1209
HpyF3I CTNAG 7 cut(s) 285, 531, 584, 669, 1250, 1319, 1328
HpySE526I ACGT 3 cut(s) 536, 544, 946
Hsp92II CATG 6 cut(s) 74, 397, 421, 685, 742, 930
Kpn2I TCCGGA 1 cut(s) 719
Kzo9I GATC 6 cut(s) 119, 323, 834, 1012, 1185, 1257
LmnI GCTCC 6 cut(s) 224, 475, 643, 722, 1024, 1337
Lsp1109I GCAGC 6 cut(s) 324, 553, 712, 902, 1243, 1264
LweI GCATC 2 cut(s) 517, 1145
MaeI CTAG 4 cut(s) 146, 611, 758, 1292
MaeII ACGT 3 cut(s) 536, 544, 946
MaeIII GTNAC 2 cut(s) 845, 1344
MalI GATC 6 cut(s) 121, 325, 836, 1014, 1187, 1259
MboI GATC 6 cut(s) 119, 323, 834, 1012, 1185, 1257
MboII GAAGA 6 cut(s) 44, 87, 161, 269, 500, 791
MfeI CAATTG 2 cut(s) 156, 638
MflI RGATCY 3 cut(s) 1012, 1185, 1257
MhlI GDGCHC 2 cut(s) 664, 1327
MlsI TGGCCA 1 cut(s) 256
MluCI AATT 4 cut(s) 156, 331, 638, 1438
MluNI TGGCCA 1 cut(s) 256
MlyI GAGTC 2 cut(s) 226, 374
MmeI TCCRAC 3 cut(s) 762, 1005, 1294
Mox20I TGGCCA 1 cut(s) 256
MroI TCCGGA 1 cut(s) 719
MroXI GAANNNNTTC 2 cut(s) 1104, 1430
MscI TGGCCA 1 cut(s) 256
MseI TTAA 3 cut(s) 108, 827, 878
MslI CAYNNNNRTG 1 cut(s) 861
Msp20I TGGCCA 1 cut(s) 256
MspA1I CMGCKG 1 cut(s) 1249
MspI CCGG 5 cut(s) 339, 362, 720, 772, 795
MspR9I CCNGG 2 cut(s) 702, 1214
MunI CAATTG 2 cut(s) 156, 638
Mva1269I GAATGC 1 cut(s) 1161
MvaI CCWGG 2 cut(s) 702, 1214
MwoI GCNNNNNNNGC 4 cut(s) 890, 896, 1079, 1209
NdeI CATATG 1 cut(s) 777
NdeII GATC 6 cut(s) 119, 323, 834, 1012, 1185, 1257
NlaIII CATG 6 cut(s) 74, 397, 421, 685, 742, 930
NlaIV GGNNCC 1 cut(s) 1427
NmuCI GTSAC 1 cut(s) 1344
NspV TTCGAA 1 cut(s) 790
PceI AGGCCT 1 cut(s) 1095
PcsI WCGNNNNNNNCGW 1 cut(s) 577
PctI GAATGC 1 cut(s) 1161
PdmI GAANNNNTTC 2 cut(s) 1104, 1430
PfeI GAWTC 3 cut(s) 317, 614, 787
PflMI CCANNNNNTGG 1 cut(s) 98
PinAI ACCGGT 1 cut(s) 794
PkrI GCNGC 7 cut(s) 314, 568, 727, 892, 1135, 1233, 1279
PleI GAGTC 2 cut(s) 226, 373
PpsI GAGTC 2 cut(s) 226, 373
PpuMI RGGWCCY 1 cut(s) 704
Psp124BI GAGCTC 2 cut(s) 664, 1327
Psp1406I AACGTT 1 cut(s) 946
Psp5II RGGWCCY 1 cut(s) 704
Psp6I CCWGG 2 cut(s) 700, 1212
PspFI CCCAGC 1 cut(s) 937
PspGI CCWGG 2 cut(s) 700, 1212
PspN4I GGNNCC 1 cut(s) 1427
PspPI GGNCC 3 cut(s) 550, 695, 704
PspPPI RGGWCCY 1 cut(s) 704
PstNI CAGNNNCTG 1 cut(s) 676
PsuI RGATCY 3 cut(s) 1012, 1185, 1257
PvuII CAGCTG 1 cut(s) 1249
RsaI GTAC 1 cut(s) 1307
RsaNI GTAC 1 cut(s) 1306
RseI CAYNNNNRTG 1 cut(s) 861
SacI GAGCTC 2 cut(s) 664, 1327
SaqAI TTAA 3 cut(s) 108, 827, 878
SatI GCNGC 7 cut(s) 313, 567, 726, 891, 1134, 1232, 1278
Sau3AI GATC 6 cut(s) 119, 323, 834, 1012, 1185, 1257
Sau96I GGNCC 3 cut(s) 550, 695, 704
ScaI AGTACT 1 cut(s) 1307
SchI GAGTC 2 cut(s) 226, 374
ScrFI CCNGG 2 cut(s) 702, 1214
SduI GDGCHC 2 cut(s) 664, 1327
SfaNI GCATC 2 cut(s) 517, 1145
SfuI TTCGAA 1 cut(s) 790
SinI GGWCC 2 cut(s) 695, 704
SmiMI CAYNNNNRTG 1 cut(s) 861
SmlI CTYRAG 2 cut(s) 427, 1225
SmoI CTYRAG 2 cut(s) 427, 1225
Sse9I AATT 4 cut(s) 156, 331, 638, 1438
SseBI AGGCCT 1 cut(s) 1095
SsiI CCGC 3 cut(s) 1134, 1210, 1255
SspI AATATT 1 cut(s) 732
SspMI CTAG 4 cut(s) 146, 611, 758, 1292
SstI GAGCTC 2 cut(s) 664, 1327
StuI AGGCCT 1 cut(s) 1095
StyD4I CCNGG 2 cut(s) 700, 1212
TaaI ACNGT 4 cut(s) 845, 1240, 1267, 1284
TaiI ACGT 3 cut(s) 539, 547, 949
TaqI TCGA 6 cut(s) 132, 460, 790, 1098, 1122, 1197
TasI AATT 4 cut(s) 156, 331, 638, 1438
TatI WGTACW 1 cut(s) 1305
TauI GCSGC 1 cut(s) 1136
TfiI GAWTC 3 cut(s) 317, 614, 787
Tru1I TTAA 3 cut(s) 108, 827, 878
Tru9I TTAA 3 cut(s) 108, 827, 878
TscAI CASTG 1 cut(s) 1368
TseFI GTSAC 1 cut(s) 1344
TseI GCWGC 6 cut(s) 312, 566, 725, 890, 1231, 1277
Tsp45I GTSAC 1 cut(s) 1344
TspDTI ATGAA 4 cut(s) 59, 94, 670, 1389
TspGWI ACGGA 4 cut(s) 962, 1037, 1167, 1412
TspRI CASTG 1 cut(s) 1368
Van91I CCANNNNNTGG 1 cut(s) 98
VpaK11BI GGWCC 2 cut(s) 695, 704
XagI CCTNNNNNAGG 1 cut(s) 207
XmnI GAANNNNTTC 2 cut(s) 1104, 1430
XspI CTAG 4 cut(s) 146, 611, 758, 1292
ZrmI AGTACT 1 cut(s) 1307
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.