pycom11g13570
BZIP Family

transcription factor

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr11
Physical Location & Seq
Reverse (-)
13100821 .. 13105491
4671 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom11g13570.9

Sequence Viewer

Length: 1236 bp
ATGGCTTTTATTTCTTCTGCTACATGTCCTGATTCCAGCTTCTTCTTGGAGTACAAAGATGAAAATGGTCTGAGAAAATCTTGCATGGCGGCGAGTCATCAAGTTGGAGACGCTACCGCCACTGTCACCACCGCTGGTTTGTCATCGGAATCAGGACCGTCCAATCACCATATCCCTTATGCTGTTCTTCATGGGATGAATGTTCCTTCCACCAGTTTTCTTAATCAAGAAGGATCTGCCTTTGATTTTGGGGAGCTGGAAGAAGCAATTGCGCGGCAAGTTAGAAACGATGAAGCTCAAGCACCTTTATTCACAGCAGGAGGAGAAGGAGCAGGCAGGCCTGCTGCAACTCTTGAAATGTTTCCTGCTTGGCCAATGAGATTCCACCAAACCTCAAGAGGGAGTTCAAAGTCAGGAGGGGAAGAAAGCACAGACTCAGAATCACAAGTGAACACTCTAACAACAACAACAACAAACCAGTTGGAACTGGAACCAGAATCTCCCATGAGTAAAAATCCTTCTTCCTCACAGGCTGCTTTTGATCAGAAGCATCTCCACTTTCAACAGCAACAGCAACAATTACAGAAAAAGTTGGCAATTAGTGACACTTCCAGAGGACCTAATTCACAAACTCAATCAGCTCCCAAACCCTCCCAGGAGAAGAGGAAGGGAGCTGGTTCAACATCAGAGAATAAAAAACTTGATGCTAAGACATTGAGACGTTTAGCTCAAAACAGAGAAGCTGCACGAAAAAGCCGCCTCAGAAAAAAGGCTTATGTACAACAGCTAGAGTCAAGCAGGATAAAGCTTACACAGCTTGAGCAAGAACTTCATAGAGCGCGCGCTCAGGGGTTGTTCTTGGCTGGTGCCGGTGGTGGTCTTGGCAATATCAGCTCAGGTGCTGCAATATTTGACATGGAATATGCAAGATGGCTAGAAGACGACCACCGGCGCATGTCGGAGTTCCGAACAGGGTTACAAGCACATTTATCGGACAGCGATCTTCAGCTAAGTGTGGACGGATATATTTCTCATTACGATGAACTTTTCCAGCTGAAAGGAGTGGCTGCTAAATCTGATGTGTTCCACCTCATAACTGGAATTTGGACTACTCCAGCTGAACGTTGCTTCCTCTGGATGGGTGGTTTTAGACCCTCTGAGCTCATCAAGATGCTAATAGGACAGTTAGAACCACTAACAGAACAGCAATTCATGGGGATCATCCGACAGTTATAA

Protein Analysis

412

Amino Acids

45.25

Weight (kDa)

6.48

Isoelectric Point (pI)

56.17

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1234
AccB1I GGYRCC 1 cut(s) 866
AccII CGCG 3 cut(s) 274, 841, 843
AciI CCGC 5 cut(s) 89, 117, 132, 274, 757
AclI AACGTT 1 cut(s) 1123
AclWI GGATC 2 cut(s) 241, 1226
AcoI YGGCCR 1 cut(s) 371
AcsI RAATTY 1 cut(s) 1101
AcuI CTGAAG 1 cut(s) 989
AfaI GTAC 2 cut(s) 53, 780
AfiI CCNNNNNNNGG 2 cut(s) 399, 1138
AflIII ACRYGT 1 cut(s) 23
AgsI TTSAA 4 cut(s) 356, 408, 563, 681
AjnI CCWGG 1 cut(s) 654
AloI GAACNNNNNNTCC 2 cut(s) 1113, 1145
Alw21I GWGCWC 1 cut(s) 1164
Alw26I GTCTC 2 cut(s) 102, 712
AlwI GGATC 2 cut(s) 241, 1226
AlwNI CAGNNNCTG 1 cut(s) 902
AoxI GGCC 2 cut(s) 338, 371
ApeKI GCWGC 5 cut(s) 344, 533, 743, 902, 1067
ApoI RAATTY 1 cut(s) 1101
Asp700I GAANNNNTTC 1 cut(s) 360
AspLEI GCGC 5 cut(s) 274, 841, 843, 845, 954
AspS9I GGNCC 2 cut(s) 155, 617
AsuHPI GGTGA 2 cut(s) 118, 158
AvaII GGWCC 2 cut(s) 155, 617
BalI TGGCCA 1 cut(s) 373
BanI GGYRCC 1 cut(s) 866
BanII GRGCYC 1 cut(s) 1164
BarI GAAGNNNNNNTAC 2 cut(s) 502, 534
BbsI GAAGAC 1 cut(s) 945
Bbv12I GWGCWC 1 cut(s) 1164
BbvI GCAGC 5 cut(s) 331, 520, 730, 889, 1054
BccI CCATC 2 cut(s) 924, 1132
BcgI CGANNNNNNTGC 2 cut(s) 972, 1006
BciT130I CCWGG 1 cut(s) 656
BclI TGATCA 1 cut(s) 541
BcoDI GTCTC 2 cut(s) 102, 712
BfaI CTAG 2 cut(s) 788, 935
BisI GCNGC 8 cut(s) 90, 275, 345, 534, 744, 757, 903, 1068
BlsI GCNGC 8 cut(s) 91, 276, 346, 535, 745, 758, 904, 1069
Bme1390I CCNGG 1 cut(s) 656
Bme18I GGWCC 2 cut(s) 155, 617
BmgT120I GGNCC 2 cut(s) 155, 617
BmiI GGNNCC 2 cut(s) 492, 868
BmrFI CCNGG 1 cut(s) 656
BmsI GCATC 3 cut(s) 559, 694, 1161
BpiI GAAGAC 1 cut(s) 945
BpmI CTGGAG 1 cut(s) 1098
Bpu10I CCTNAGC 2 cut(s) 846, 895
BpuEI CTTGAG 3 cut(s) 282, 379, 839
BsaJI CCNNGG 1 cut(s) 654
Bsc4I CCNNNNNNNGG 2 cut(s) 399, 1138
Bse118I RCCGGY 2 cut(s) 869, 948
Bse1I ACTGG 4 cut(s) 213, 478, 492, 1102
BseBI CCWGG 1 cut(s) 656
BseDI CCNNGG 1 cut(s) 654
BseGI GGATG 3 cut(s) 201, 1143, 1221
BseLI CCNNNNNNNGG 2 cut(s) 399, 1138
BseMII CTCAG 6 cut(s) 62, 450, 775, 860, 909, 1149
BseNI ACTGG 4 cut(s) 213, 478, 492, 1102
BsePI GCGCGC 2 cut(s) 839, 841
BseRI GAGGAG 1 cut(s) 336
BseXI GCAGC 5 cut(s) 331, 520, 730, 889, 1054
BsgI GTGCAG 1 cut(s) 729
Bsh1236I CGCG 3 cut(s) 274, 841, 843
BshFI GGCC 2 cut(s) 340, 373
BshNI GGYRCC 1 cut(s) 866
BsiHKAI GWGCWC 1 cut(s) 1164
BsiSI CCGG 2 cut(s) 870, 949
BslI CCNNNNNNNGG 2 cut(s) 399, 1138
BsmAI GTCTC 2 cut(s) 102, 712
BsmBI CGTCTC 2 cut(s) 102, 712
BsnI GGCC 2 cut(s) 340, 373
Bsp1286I GDGCHC 1 cut(s) 1164
Bsp1407I TGTACA 1 cut(s) 778
Bsp143I GATC 4 cut(s) 233, 541, 1000, 1218
BspACI CCGC 5 cut(s) 89, 117, 132, 274, 757
BspANI GGCC 2 cut(s) 340, 373
BspCNI CTCAG 6 cut(s) 63, 449, 774, 859, 908, 1150
BspFNI CGCG 3 cut(s) 274, 841, 843
BspLI GGNNCC 2 cut(s) 492, 868
BspPI GGATC 2 cut(s) 241, 1226
BspT107I GGYRCC 1 cut(s) 866
BsrFI RCCGGY 2 cut(s) 869, 948
BsrGI TGTACA 1 cut(s) 778
BsrI ACTGG 4 cut(s) 213, 478, 492, 1102
BssAI RCCGGY 2 cut(s) 869, 948
BssECI CCNNGG 1 cut(s) 654
BssHII GCGCGC 2 cut(s) 839, 841
BssMI GATC 4 cut(s) 233, 541, 1000, 1218
Bst2UI CCWGG 1 cut(s) 656
Bst4CI ACNGT 4 cut(s) 124, 159, 1185, 1230
Bst6I CTCTTC 1 cut(s) 656
BstAUI TGTACA 1 cut(s) 778
BstC8I GCNNGC 5 cut(s) 334, 338, 342, 841, 843
BstDEI CTNAG 8 cut(s) 71, 436, 708, 761, 846, 895, 1010, 1158
BstF5I GGATG 3 cut(s) 201, 1143, 1221
BstFNI CGCG 3 cut(s) 274, 841, 843
BstHHI GCGC 5 cut(s) 274, 841, 843, 845, 954
BstKTI GATC 4 cut(s) 236, 544, 1003, 1221
BstMAI GTCTC 2 cut(s) 102, 712
BstMBI GATC 4 cut(s) 233, 541, 1000, 1218
BstMWI GCNNNNNNNGC 2 cut(s) 814, 891
BstNI CCWGG 1 cut(s) 656
BstNSI RCATGY 2 cut(s) 27, 958
BstSCI CCNGG 1 cut(s) 654
BstUI CGCG 3 cut(s) 274, 841, 843
BstV1I GCAGC 5 cut(s) 331, 520, 730, 889, 1054
BstV2I GAAGAC 1 cut(s) 945
BstX2I RGATCY 1 cut(s) 233
BstYI RGATCY 1 cut(s) 233
BsuRI GGCC 2 cut(s) 340, 373
BtsCI GGATG 3 cut(s) 201, 1143, 1221
BtsIMutI CAGTG 1 cut(s) 120
Cac8I GCNNGC 5 cut(s) 334, 338, 342, 841, 843
CaiI CAGNNNCTG 1 cut(s) 902
CfoI GCGC 5 cut(s) 274, 841, 843, 845, 954
Cfr10I RCCGGY 2 cut(s) 869, 948
Cfr13I GGNCC 2 cut(s) 155, 617
CseI GACGC 1 cut(s) 119
Csp6I GTAC 2 cut(s) 52, 779
CviAII CATG 7 cut(s) 24, 85, 191, 505, 916, 955, 1213
CviQI GTAC 2 cut(s) 52, 779
DdeI CTNAG 8 cut(s) 71, 436, 708, 761, 846, 895, 1010, 1158
DpnI GATC 4 cut(s) 235, 543, 1002, 1220
DpnII GATC 4 cut(s) 233, 541, 1000, 1218
EaeI YGGCCR 1 cut(s) 371
Eam1104I CTCTTC 1 cut(s) 656
EarI CTCTTC 1 cut(s) 656
Ecl136II GAGCTC 1 cut(s) 1162
Eco147I AGGCCT 1 cut(s) 340
Eco24I GRGCYC 1 cut(s) 1164
Eco47I GGWCC 2 cut(s) 155, 617
Eco53kI GAGCTC 1 cut(s) 1162
Eco57I CTGAAG 1 cut(s) 989
EcoICRI GAGCTC 1 cut(s) 1162
EcoO109I RGGNCCY 1 cut(s) 617
EcoRII CCWGG 1 cut(s) 654
EcoT38I GRGCYC 1 cut(s) 1164
Esp3I CGTCTC 2 cut(s) 102, 712
FaeI CATG 7 cut(s) 27, 88, 194, 508, 919, 958, 1216
FatI CATG 7 cut(s) 23, 84, 190, 504, 915, 954, 1212
FbaI TGATCA 1 cut(s) 541
Fnu4HI GCNGC 8 cut(s) 90, 275, 345, 534, 744, 757, 903, 1068
FokI GGATG 3 cut(s) 208, 1150, 1208
FriOI GRGCYC 1 cut(s) 1164
Fsp4HI GCNGC 8 cut(s) 90, 275, 345, 534, 744, 757, 903, 1068
FspBI CTAG 2 cut(s) 788, 935
GlaI GCGC 5 cut(s) 273, 840, 842, 844, 953
GluI GCNGC 8 cut(s) 90, 275, 345, 534, 744, 757, 903, 1068
GsuI CTGGAG 1 cut(s) 1098
HaeIII GGCC 2 cut(s) 340, 373
HapII CCGG 2 cut(s) 870, 949
HgaI GACGC 1 cut(s) 119
HhaI GCGC 5 cut(s) 274, 841, 843, 845, 954
Hin1II CATG 7 cut(s) 27, 88, 194, 508, 919, 958, 1216
Hin6I GCGC 5 cut(s) 272, 839, 841, 843, 952
HinP1I GCGC 5 cut(s) 272, 839, 841, 843, 952
HindIII AAGCTT 1 cut(s) 806
HinfI GANTC 8 cut(s) 32, 94, 149, 381, 434, 440, 497, 791
HpaII CCGG 2 cut(s) 870, 949
HphI GGTGA 2 cut(s) 118, 158
Hpy166II GTNNAC 2 cut(s) 451, 1018
Hpy188III TCNNGA 9 cut(s) 29, 153, 227, 353, 396, 414, 612, 1135, 1168
Hpy8I GTNNAC 2 cut(s) 451, 1018
HpyAV CCTTC 5 cut(s) 216, 224, 320, 528, 661
HpyCH4III ACNGT 4 cut(s) 124, 159, 1185, 1230
HpyCH4IV ACGT 2 cut(s) 721, 1123
HpyCH4V TGCA 5 cut(s) 84, 347, 746, 905, 926
HpyF10VI GCNNNNNNNGC 2 cut(s) 814, 891
HpyF3I CTNAG 8 cut(s) 71, 436, 708, 761, 846, 895, 1010, 1158
HpySE526I ACGT 2 cut(s) 721, 1123
Hsp92II CATG 7 cut(s) 27, 88, 194, 508, 919, 958, 1216
HspAI GCGC 5 cut(s) 272, 839, 841, 843, 952
Ksp22I TGATCA 1 cut(s) 541
Kzo9I GATC 4 cut(s) 233, 541, 1000, 1218
LmnI GCTCC 4 cut(s) 253, 329, 646, 671
Lsp1109I GCAGC 5 cut(s) 331, 520, 730, 889, 1054
LweI GCATC 3 cut(s) 559, 694, 1161
MaeI CTAG 2 cut(s) 788, 935
MaeII ACGT 2 cut(s) 721, 1123
MaeIII GTNAC 3 cut(s) 124, 602, 975
MalI GATC 4 cut(s) 235, 543, 1002, 1220
MboI GATC 4 cut(s) 233, 541, 1000, 1218
MboII GAAGA 9 cut(s) 6, 34, 179, 272, 434, 513, 673, 950, 995
MfeI CAATTG 1 cut(s) 267
MflI RGATCY 1 cut(s) 233
MhlI GDGCHC 1 cut(s) 1164
MlsI TGGCCA 1 cut(s) 373
MluCI AATT 6 cut(s) 267, 578, 597, 622, 1101, 1208
MluNI TGGCCA 1 cut(s) 373
MlyI GAGTC 3 cut(s) 103, 428, 800
MmeI TCCRAC 3 cut(s) 85, 462, 939
Mox20I TGGCCA 1 cut(s) 373
MroXI GAANNNNTTC 1 cut(s) 360
MscI TGGCCA 1 cut(s) 373
MseI TTAA 1 cut(s) 222
MslI CAYNNNNRTG 2 cut(s) 1038, 1169
Msp20I TGGCCA 1 cut(s) 373
MspA1I CMGCKG 3 cut(s) 134, 1054, 1118
MspI CCGG 2 cut(s) 870, 949
MspR9I CCNGG 1 cut(s) 656
MunI CAATTG 1 cut(s) 267
MvaI CCWGG 1 cut(s) 656
MvnI CGCG 3 cut(s) 274, 841, 843
MwoI GCNNNNNNNGC 2 cut(s) 814, 891
NdeII GATC 4 cut(s) 233, 541, 1000, 1218
NlaIII CATG 7 cut(s) 27, 88, 194, 508, 919, 958, 1216
NlaIV GGNNCC 2 cut(s) 492, 868
NmuCI GTSAC 2 cut(s) 124, 602
NspI RCATGY 2 cut(s) 27, 958
PauI GCGCGC 2 cut(s) 839, 841
PceI AGGCCT 1 cut(s) 340
PciI ACATGT 1 cut(s) 23
PdmI GAANNNNTTC 1 cut(s) 360
PfeI GAWTC 5 cut(s) 32, 149, 381, 440, 497
PkrI GCNGC 8 cut(s) 91, 276, 346, 535, 745, 758, 904, 1069
PleI GAGTC 3 cut(s) 102, 428, 799
PpsI GAGTC 3 cut(s) 102, 428, 799
PpuMI RGGWCCY 1 cut(s) 617
PscI ACATGT 1 cut(s) 23
PsiI TTATAA 1 cut(s) 1234
Psp124BI GAGCTC 1 cut(s) 1164
Psp1406I AACGTT 1 cut(s) 1123
Psp5II RGGWCCY 1 cut(s) 617
Psp6I CCWGG 1 cut(s) 654
PspGI CCWGG 1 cut(s) 654
PspN4I GGNNCC 2 cut(s) 492, 868
PspPI GGNCC 2 cut(s) 155, 617
PspPPI RGGWCCY 1 cut(s) 617
PstNI CAGNNNCTG 1 cut(s) 902
PsuI RGATCY 1 cut(s) 233
PteI GCGCGC 2 cut(s) 839, 841
PvuII CAGCTG 2 cut(s) 1054, 1118
RsaI GTAC 2 cut(s) 53, 780
RsaNI GTAC 2 cut(s) 52, 779
RseI CAYNNNNRTG 2 cut(s) 1038, 1169
SacI GAGCTC 1 cut(s) 1164
SaqAI TTAA 1 cut(s) 222
SatI GCNGC 8 cut(s) 90, 275, 345, 534, 744, 757, 903, 1068
Sau3AI GATC 4 cut(s) 233, 541, 1000, 1218
Sau96I GGNCC 2 cut(s) 155, 617
SchI GAGTC 3 cut(s) 103, 428, 800
ScrFI CCNGG 1 cut(s) 656
SduI GDGCHC 1 cut(s) 1164
SfaNI GCATC 3 cut(s) 559, 694, 1161
SgrAI CRCCGGYG 1 cut(s) 948
SinI GGWCC 2 cut(s) 155, 617
SmiMI CAYNNNNRTG 2 cut(s) 1038, 1169
SmlI CTYRAG 3 cut(s) 297, 394, 818
SmoI CTYRAG 3 cut(s) 297, 394, 818
Sse9I AATT 6 cut(s) 267, 578, 597, 622, 1101, 1208
SseBI AGGCCT 1 cut(s) 340
SsiI CCGC 5 cut(s) 89, 117, 132, 274, 757
SspI AATATT 1 cut(s) 909
SspMI CTAG 2 cut(s) 788, 935
SstI GAGCTC 1 cut(s) 1164
StuI AGGCCT 1 cut(s) 340
StyD4I CCNGG 1 cut(s) 654
TaaI ACNGT 4 cut(s) 124, 159, 1185, 1230
TaiI ACGT 2 cut(s) 724, 1126
TasI AATT 6 cut(s) 267, 578, 597, 622, 1101, 1208
TatI WGTACW 2 cut(s) 51, 778
TauI GCSGC 3 cut(s) 92, 277, 759
TfiI GAWTC 5 cut(s) 32, 149, 381, 440, 497
Tru1I TTAA 1 cut(s) 222
Tru9I TTAA 1 cut(s) 222
TscAI CASTG 1 cut(s) 127
TseFI GTSAC 2 cut(s) 124, 602
TseI GCWGC 5 cut(s) 344, 533, 743, 902, 1067
Tsp45I GTSAC 2 cut(s) 124, 602
TspDTI ATGAA 7 cut(s) 75, 179, 212, 306, 821, 1056, 1201
TspGWI ACGGA 1 cut(s) 1035
TspRI CASTG 1 cut(s) 127
VpaK11BI GGWCC 2 cut(s) 155, 617
XapI RAATTY 1 cut(s) 1101
XceI RCATGY 2 cut(s) 27, 958
XcmI CCANNNNNNNNNTGG 2 cut(s) 43, 1094
XmnI GAANNNNTTC 1 cut(s) 360
XspI CTAG 2 cut(s) 788, 935
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.