Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr03

Orthogroup ID

OG0002959

Physical Location & Seq

Genomic Coordinates Reverse (-)

15408362 .. 15415943

Gene Structure 7582 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD03G1143600.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1542 bp

ATGGCGGCGAGTCATCGAGTTGGAGACGCTACCGCCGCTACCGCCACTGCCACCACCGCTTGTTTGTCATCGGAACTAGGACCTTCCAATCAACATGTCCCTTATGCTGTTCTTCATGGGATGAATGCTCCTTCCACCAGTTTTCTTAATCAAGAAGGATCTGCCTTTGATTTTGGGGAGCTGGAAGAAGCAATTGCGCGGCAAGTTAGAAATGATGAAGCTCAAGCACCTTTATTTACAGGAGGAGGAGGAGGAGCAGGCAGGCCTGCTGCAACTCTGGAAATGTTCCCTTCTTGGCCAATGAGATTCCACCAAACACCAGGAGGGAGTCCAAAGTCAGGAGAGGAAGAAAGCACAGACTCAGGATCACAAGTGAACACTCTAACAACAACAACAACAAATCAGTTGGAATTGGAACCAAAATCTCCCATGAGTAAAAACCCTTCTTCCTCAAAAGCTGCTTTTGATCAGAAGCATCTACAATTTCAACAGCAACAGCAACAATTACAGCAAGAAATGGCAATTAGTGACACCGGACCTAATTCACAAACCGCATCAGCTCAAAAACCCTCCCAAGAAAAGAGGAAGGGAGCTGGTTCAACATCAGAGAATAAACAACTTGATGCTAAGACATTGAGACGTTTAGCTCAAAACAGAGAAGCTGCAAGAAAAAGCCGCCTCAGAAAAAAGGCTTATGTACAGCAGCTAGAGTCAAGCAGGATAAAGCTTACACAGCTTGAGCAAGACCTTCAAAGAGCGCGCGCTCAGGGTTTGTTCTTGGGTAGTTGTGGTGGTGGTCTTGGCAATATCAGCTCAGGTGCTGCAATATTTGATATGGAATATGTAAGATGGCTAGAAGACGACCACCGGCAAATGTCGGAGCTCCGAACAGGGTTACAAGCACATTTGTCGGACAGCGATCTTCGACTAGTTGTGGACGGATATGTTTCTCACTACGATGAAATCTTCCAGCTGAAAGGAATGGCTGCAAAATCTGATGTGTTCCACCTCATAACTGGAATGTGGACGACTCCAGCTGAACGTTGCTTCCTCTGGATGGGTGGTTTTAGACCCTCTGAGCTCATCAAGATGTTAATAGCACAGTTAGACCCACTAACAGAACAGCAATTCATGGGGATCTATAATCTGCAACAGTCCTCACAACAAGCTGAAGAGGCTCTTACTCAAGGTCTAGAGCAGCTTCATCAGTCTCTGATTGACACCATTGCCGGCGGGCCAGTCATCGACGGCATGCAACAGATGGCCGTGGCTTTGGGCAAGCTCACCAATCTTGAAGGCTTCGTTCGCCAGGCTGATAATTTTAGACAACAAACCCTTCATCAGTTACGTCGGATATTGACAGTTCGTCAGGCAGCGAGATGCTTTCTTGTAATCGGAGAGTACTATGGACGATTAAGAGCACTTAGTTCTCTTTGGGCATCTCGACCGCGAGAGACCATGATAAGCGATGATAACTCGTGCCAAACGACGACAGACCTGCAAATGGTACAACCTTCGCAGAATCATTTCTCATCCTTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0002237 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007154 GO:0007165 GO:0007275 GO:0008150 GO:0009605 GO:0009607 GO:0009617 GO:0009791 GO:0009889 GO:0009908 GO:0009987 GO:0010033 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0022414 GO:0023052 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0042221 GO:0042802 GO:0042803 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044424 GO:0044464 GO:0046983 GO:0048367 GO:0048437 GO:0048438 GO:0048443 GO:0048466 GO:0048608 GO:0048653 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0051704 GO:0051707 GO:0051716 GO:0060255 GO:0061458 GO:0065007 GO:0071588 GO:0080090 GO:0090567 GO:0097159 GO:0099402 GO:0140110 GO:1901363 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04075 map04075

Pfam Domains

Protein Families

DOG1 bZIP_1

Protein Analysis

514

Amino Acids

56.52

Weight (kDa)

6.21

Isoelectric Point (pI)

57.47

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
bZIP_2	PF07716	208 - 251	5.8e-06	Basic region leucine zipper
bZIP_1	PF00170	209 - 251	1.4e-07	bZIP transcription factor
DOG1	PF14144	291 - 366	1e-31	Seed dormancy control

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002959)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G08320 AT1G08320 AT1G08320 AT1G08320 AT1G08320
fragaria_vesca	FvH4_3g24830 FvH4_3g24830 FvH4_3g24830 FvH4_3g24830 FvH4_3g24830 FvH4_3g24830 FvH4_3g24830 FvH4_3g24830 FvH4_3g24830 FvH4_3g24830
malus_domestica	MD03G1143600.v1.1 MD11G1164300.v1.1
prunus_persica	Prupe.6G129100_v2.0.a1 Prupe.6G129100_v2.0.a1 Prupe.6G129100_v2.0.a1 Prupe.6G129100_v2.0.a1 Prupe.6G129100_v2.0.a1 Prupe.6G129100_v2.0.a1 Prupe.6G129100_v2.0.a1 Prupe.6G129100_v2.0.a1
pyrus_communis	pycom03g09870 pycom11g13570
rosa_chinensis	RchiOBHm_Chr5g0044421
rosa_laevigata	RLG00000034273
rosa_multiflora	Rmu_sc0007129.1_g000013
rosa_roxburghii	Rroxscaffold_1G00036540
rosa_rugosa	Rorug05G0213900 Rorug05G0214000
rosa_samantha	Rh5AG298400 Rh5BG305700 Rh5CG332700 Rh5DG314900
rosa_wichuraiana	Rw5G027610

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1506
AccII	CGCG	4 cut(s)	199, 760, 762, 1450
AclI	AACGTT	1 cut(s)	1042
AclWI	GGATC	3 cut(s)	166, 373, 1145
AcoI	YGGCCR	2 cut(s)	296, 1263
AcuI	CTGAAG	1 cut(s)	1191
AfaI	GTAC	3 cut(s)	699, 1403, 1509
AfiI	CCNNNNNNNGG	3 cut(s)	338, 1057, 1504
AflIII	ACRYGT	1 cut(s)	94
AgsI	TTSAA	4 cut(s)	488, 600, 752, 1295
AhdI	GACNNNNNGTC	1 cut(s)	1365
AhlI	ACTAGT	1 cut(s)	928
AjnI	CCWGG	2 cut(s)	319, 1308
AloI	GAACNNNNNNTCC	2 cut(s)	1032, 1064
Alw21I	GWGCWC	3 cut(s)	885, 1083, 1423
Alw26I	GTCTC	4 cut(s)	18, 631, 1215, 1448
AlwI	GGATC	3 cut(s)	166, 373, 1145
AlwNI	CAGNNNCTG	2 cut(s)	821, 1213
AoxI	GGCC	4 cut(s)	263, 296, 1235, 1263
ApeKI	GCWGC	8 cut(s)	269, 458, 662, 703, 821, 986, 1198, 1373
Asp700I	GAANNNNTTC	1 cut(s)	1526
AspLEI	GCGC	4 cut(s)	199, 760, 762, 764
AspS9I	GGNCC	3 cut(s)	80, 536, 1235
AsuHPI	GGTGA	1 cut(s)	1276
AvaII	GGWCC	2 cut(s)	80, 536
BalI	TGGCCA	1 cut(s)	298
BanII	GRGCYC	2 cut(s)	885, 1083
BarI	GAAGNNNNNNTAC	2 cut(s)	427, 459
BauI	CACGAG	1 cut(s)	1477
BbsI	GAAGAC	1 cut(s)	864
Bbv12I	GWGCWC	3 cut(s)	885, 1083, 1423
BbvI	GCAGC	8 cut(s)	256, 445, 649, 715, 808, 973, 1210, 1385
BccI	CCATC	3 cut(s)	843, 1051, 1255
BceAI	ACGGC	2 cut(s)	1250, 1264
BcgI	CGANNNNNNTGC	4 cut(s)	891, 925, 1480, 1514
BciT130I	CCWGG	2 cut(s)	321, 1310
BclI	TGATCA	1 cut(s)	466
BcoDI	GTCTC	4 cut(s)	18, 631, 1215, 1448
BcuI	ACTAGT	1 cut(s)	928
BfaI	CTAG	5 cut(s)	77, 707, 854, 929, 1193
BfuAI	ACCTGC	1 cut(s)	1506
BmcAI	AGTACT	1 cut(s)	1403
Bme1390I	CCNGG	2 cut(s)	321, 1310
Bme18I	GGWCC	2 cut(s)	80, 536
BmeRI	GACNNNNNGTC	1 cut(s)	1365
BmgT120I	GGNCC	3 cut(s)	80, 536, 1235
BmiI	GGNNCC	1 cut(s)	417
BmrFI	CCNGG	2 cut(s)	321, 1310
BmsI	GCATC	5 cut(s)	484, 563, 613, 1370, 1448
BpiI	GAAGAC	1 cut(s)	864
BpmI	CTGGAG	1 cut(s)	1017
Bpu10I	CCTNAGC	2 cut(s)	765, 814
BpuEI	CTTGAG	3 cut(s)	207, 758, 1170
BsaI	GGTCTC	1 cut(s)	1448
BsaJI	CCNNGG	1 cut(s)	1266
BsaWI	WCCGGW	1 cut(s)	533
Bsc4I	CCNNNNNNNGG	3 cut(s)	338, 1057, 1504
Bse118I	RCCGGY	2 cut(s)	867, 1229
Bse1I	ACTGG	3 cut(s)	138, 1021, 1238
Bse3DI	GCAATG	1 cut(s)	1224
BseBI	CCWGG	2 cut(s)	321, 1310
BseDI	CCNNGG	1 cut(s)	1266
BseGI	GGATG	3 cut(s)	126, 1062, 1532
BseLI	CCNNNNNNNGG	3 cut(s)	338, 1057, 1504
BseMI	GCAATG	1 cut(s)	1224
BseMII	CTCAG	5 cut(s)	375, 694, 779, 828, 1068
BseNI	ACTGG	3 cut(s)	138, 1021, 1238
BsePI	GCGCGC	2 cut(s)	758, 760
BseRI	GAGGAG	4 cut(s)	258, 261, 264, 267
BseXI	GCAGC	8 cut(s)	256, 445, 649, 715, 808, 973, 1210, 1385
Bsh1236I	CGCG	4 cut(s)	199, 760, 762, 1450
Bsh1285I	CGRYCG	1 cut(s)	1448
BshFI	GGCC	4 cut(s)	265, 298, 1237, 1265
BsiEI	CGRYCG	1 cut(s)	1448
BsiHKAI	GWGCWC	3 cut(s)	885, 1083, 1423
BsiSI	CCGG	3 cut(s)	534, 868, 1230
BslFI	GGGAC	1 cut(s)	83
BslI	CCNNNNNNNGG	3 cut(s)	338, 1057, 1504
BsmAI	GTCTC	4 cut(s)	18, 631, 1215, 1448
BsmBI	CGTCTC	2 cut(s)	18, 631
BsmFI	GGGAC	1 cut(s)	83
BsmI	GAATGC	1 cut(s)	130
BsnI	GGCC	4 cut(s)	265, 298, 1237, 1265
Bso31I	GGTCTC	1 cut(s)	1448
Bsp1286I	GDGCHC	3 cut(s)	885, 1083, 1423
Bsp1407I	TGTACA	1 cut(s)	697
Bsp143I	GATC	5 cut(s)	158, 365, 466, 919, 1137
BspANI	GGCC	4 cut(s)	265, 298, 1237, 1265
BspCNI	CTCAG	5 cut(s)	374, 693, 778, 827, 1069
BspFNI	CGCG	4 cut(s)	199, 760, 762, 1450
BspLI	GGNNCC	1 cut(s)	417
BspMI	ACCTGC	1 cut(s)	1506
BspPI	GGATC	3 cut(s)	166, 373, 1145
BspTNI	GGTCTC	1 cut(s)	1448
BsrDI	GCAATG	1 cut(s)	1224
BsrFI	RCCGGY	2 cut(s)	867, 1229
BsrGI	TGTACA	1 cut(s)	697
BsrI	ACTGG	3 cut(s)	138, 1021, 1238
BssAI	RCCGGY	2 cut(s)	867, 1229
BssECI	CCNNGG	1 cut(s)	1266
BssHII	GCGCGC	2 cut(s)	758, 760
BssMI	GATC	5 cut(s)	158, 365, 466, 919, 1137
BssSI	CACGAG	1 cut(s)	1477
Bst2BI	CACGAG	1 cut(s)	1477
Bst2UI	CCWGG	2 cut(s)	321, 1310
Bst4CI	ACNGT	3 cut(s)	1104, 1155, 1363
Bst6I	CTCTTC	1 cut(s)	1167
BstAUI	TGTACA	1 cut(s)	697
BstC8I	GCNNGC	9 cut(s)	259, 263, 267, 760, 762, 1231, 1235, 1253, 1280
BstDEI	CTNAG	7 cut(s)	361, 627, 680, 765, 814, 1077, 1424
BstDSI	CCRYGG	1 cut(s)	1266
BstF5I	GGATG	3 cut(s)	126, 1062, 1532
BstFNI	CGCG	4 cut(s)	199, 760, 762, 1450
BstHHI	GCGC	4 cut(s)	199, 760, 762, 764
BstKTI	GATC	5 cut(s)	161, 368, 469, 922, 1140
BstMAI	GTCTC	4 cut(s)	18, 631, 1215, 1448
BstMBI	GATC	5 cut(s)	158, 365, 466, 919, 1137
BstMCI	CGRYCG	1 cut(s)	1448
BstMWI	GCNNNNNNNGC	7 cut(s)	35, 41, 56, 733, 810, 1175, 1305
BstNI	CCWGG	2 cut(s)	321, 1310
BstNSI	RCATGY	2 cut(s)	98, 1255
BstSCI	CCNGG	2 cut(s)	319, 1308
BstUI	CGCG	4 cut(s)	199, 760, 762, 1450
BstV1I	GCAGC	8 cut(s)	256, 445, 649, 715, 808, 973, 1210, 1385
BstV2I	GAAGAC	1 cut(s)	864
BstX2I	RGATCY	2 cut(s)	158, 1137
BstYI	RGATCY	2 cut(s)	158, 1137
BsuRI	GGCC	4 cut(s)	265, 298, 1237, 1265
BtgI	CCRYGG	1 cut(s)	1266
BtgZI	GCGATG	1 cut(s)	1482
BtsCI	GGATG	3 cut(s)	126, 1062, 1532
BtsI	GCAGTG	1 cut(s)	45
BtsIMutI	CAGTG	1 cut(s)	45
BveI	ACCTGC	1 cut(s)	1506
Cac8I	GCNNGC	9 cut(s)	259, 263, 267, 760, 762, 1231, 1235, 1253, 1280
CaiI	CAGNNNCTG	2 cut(s)	821, 1213
CfoI	GCGC	4 cut(s)	199, 760, 762, 764
Cfr10I	RCCGGY	2 cut(s)	867, 1229
Cfr13I	GGNCC	3 cut(s)	80, 536, 1235
CseI	GACGC	1 cut(s)	35
Csp6I	GTAC	3 cut(s)	698, 1402, 1508
CviAII	CATG	6 cut(s)	95, 116, 430, 1132, 1252, 1459
CviQI	GTAC	3 cut(s)	698, 1402, 1508
DdeI	CTNAG	7 cut(s)	361, 627, 680, 765, 814, 1077, 1424
DpnI	GATC	5 cut(s)	160, 367, 468, 921, 1139
DpnII	GATC	5 cut(s)	158, 365, 466, 919, 1137
DriI	GACNNNNNGTC	1 cut(s)	1365
EaeI	YGGCCR	2 cut(s)	296, 1263
Eam1104I	CTCTTC	1 cut(s)	1167
Eam1105I	GACNNNNNGTC	1 cut(s)	1365
EarI	CTCTTC	1 cut(s)	1167
Ecl136II	GAGCTC	2 cut(s)	883, 1081
Eco147I	AGGCCT	1 cut(s)	265
Eco24I	GRGCYC	2 cut(s)	885, 1083
Eco31I	GGTCTC	1 cut(s)	1448
Eco47I	GGWCC	2 cut(s)	80, 536
Eco53kI	GAGCTC	2 cut(s)	883, 1081
Eco57I	CTGAAG	1 cut(s)	1191
EcoICRI	GAGCTC	2 cut(s)	883, 1081
EcoO109I	RGGNCCY	1 cut(s)	80
EcoRII	CCWGG	2 cut(s)	319, 1308
EcoT38I	GRGCYC	2 cut(s)	885, 1083
Esp3I	CGTCTC	2 cut(s)	18, 631
FaeI	CATG	6 cut(s)	98, 119, 433, 1135, 1255, 1462
FalI	AAGNNNNNCTT	2 cut(s)	1164, 1196
FaqI	GGGAC	1 cut(s)	83
FatI	CATG	6 cut(s)	94, 115, 429, 1131, 1251, 1458
FauI	CCCGC	1 cut(s)	1226
FbaI	TGATCA	1 cut(s)	466
FokI	GGATG	3 cut(s)	133, 1069, 1519
FriOI	GRGCYC	2 cut(s)	885, 1083
FspBI	CTAG	5 cut(s)	77, 707, 854, 929, 1193
GlaI	GCGC	4 cut(s)	198, 759, 761, 763
GsuI	CTGGAG	1 cut(s)	1017
HaeIII	GGCC	4 cut(s)	265, 298, 1237, 1265
HapII	CCGG	3 cut(s)	534, 868, 1230
HgaI	GACGC	1 cut(s)	35
HhaI	GCGC	4 cut(s)	199, 760, 762, 764
Hin1II	CATG	6 cut(s)	98, 119, 433, 1135, 1255, 1462
Hin6I	GCGC	4 cut(s)	197, 758, 760, 762
HinP1I	GCGC	4 cut(s)	197, 758, 760, 762
HindIII	AAGCTT	1 cut(s)	725
HinfI	GANTC	7 cut(s)	10, 306, 328, 359, 710, 1030, 1522
HpaII	CCGG	3 cut(s)	534, 868, 1230
HphI	GGTGA	1 cut(s)	1276
Hpy166II	GTNNAC	3 cut(s)	376, 937, 1026
Hpy188III	TCNNGA	9 cut(s)	152, 278, 339, 363, 1054, 1087, 1193, 1292, 1443
Hpy8I	GTNNAC	3 cut(s)	376, 937, 1026
Hpy99I	CGWCG	3 cut(s)	1250, 1353, 1492
HpyCH4III	ACNGT	3 cut(s)	1104, 1155, 1363
HpyCH4IV	ACGT	3 cut(s)	640, 1042, 1348
HpyCH4V	TGCA	7 cut(s)	272, 665, 824, 989, 1150, 1255, 1501
HpyF10VI	GCNNNNNNNGC	7 cut(s)	35, 41, 56, 733, 810, 1175, 1305
HpyF3I	CTNAG	7 cut(s)	361, 627, 680, 765, 814, 1077, 1424
HpySE526I	ACGT	3 cut(s)	640, 1042, 1348
Hsp92II	CATG	6 cut(s)	98, 119, 433, 1135, 1255, 1462
HspAI	GCGC	4 cut(s)	197, 758, 760, 762
KroI	GCCGGC	1 cut(s)	1229
KroNI	GCCGGC	1 cut(s)	1231
Ksp22I	TGATCA	1 cut(s)	466
Kzo9I	GATC	5 cut(s)	158, 365, 466, 919, 1137
LmnI	GCTCC	6 cut(s)	133, 178, 254, 590, 880, 888
Lsp1109I	GCAGC	8 cut(s)	256, 445, 649, 715, 808, 973, 1210, 1385
LweI	GCATC	5 cut(s)	484, 563, 613, 1370, 1448
MaeI	CTAG	5 cut(s)	77, 707, 854, 929, 1193
MaeII	ACGT	3 cut(s)	640, 1042, 1348
MaeIII	GTNAC	3 cut(s)	527, 894, 1344
MalI	GATC	5 cut(s)	160, 367, 468, 921, 1139
MboI	GATC	5 cut(s)	158, 365, 466, 919, 1137
MboII	GAAGA	8 cut(s)	104, 197, 359, 438, 869, 914, 958, 1184
MfeI	CAATTG	1 cut(s)	192
MflI	RGATCY	2 cut(s)	158, 1137
MhlI	GDGCHC	3 cut(s)	885, 1083, 1423
MlsI	TGGCCA	1 cut(s)	298
MluCI	AATT	8 cut(s)	192, 410, 482, 503, 522, 541, 1127, 1318
MluNI	TGGCCA	1 cut(s)	298
MlyI	GAGTC	5 cut(s)	19, 337, 353, 719, 1024
MmeI	TCCRAC	4 cut(s)	387, 858, 891, 1331
Mox20I	TGGCCA	1 cut(s)	298
MroNI	GCCGGC	1 cut(s)	1229
MroXI	GAANNNNTTC	1 cut(s)	1526
MscI	TGGCCA	1 cut(s)	298
MseI	TTAA	3 cut(s)	147, 1094, 1415
MslI	CAYNNNNRTG	2 cut(s)	957, 1088
Msp20I	TGGCCA	1 cut(s)	298
MspA1I	CMGCKG	2 cut(s)	973, 1037
MspI	CCGG	3 cut(s)	534, 868, 1230
MspR9I	CCNGG	2 cut(s)	321, 1310
MunI	CAATTG	1 cut(s)	192
Mva1269I	GAATGC	1 cut(s)	130
MvaI	CCWGG	2 cut(s)	321, 1310
MvnI	CGCG	4 cut(s)	199, 760, 762, 1450
MwoI	GCNNNNNNNGC	7 cut(s)	35, 41, 56, 733, 810, 1175, 1305
NaeI	GCCGGC	1 cut(s)	1231
NdeII	GATC	5 cut(s)	158, 365, 466, 919, 1137
NgoMIV	GCCGGC	1 cut(s)	1229
NlaIII	CATG	6 cut(s)	98, 119, 433, 1135, 1255, 1462
NlaIV	GGNNCC	1 cut(s)	417
NmuCI	GTSAC	1 cut(s)	527
NspI	RCATGY	2 cut(s)	98, 1255
PaeI	GCATGC	1 cut(s)	1255
PauI	GCGCGC	2 cut(s)	758, 760
PceI	AGGCCT	1 cut(s)	265
PciI	ACATGT	1 cut(s)	94
PcsI	WCGNNNNNNNCGW	1 cut(s)	1484
PctI	GAATGC	1 cut(s)	130
PdiI	GCCGGC	1 cut(s)	1231
PdmI	GAANNNNTTC	1 cut(s)	1526
PfeI	GAWTC	2 cut(s)	306, 1522
PleI	GAGTC	5 cut(s)	18, 336, 353, 718, 1024
PpsI	GAGTC	5 cut(s)	18, 336, 353, 718, 1024
PpuMI	RGGWCCY	1 cut(s)	80
PscI	ACATGT	1 cut(s)	94
Psp124BI	GAGCTC	2 cut(s)	885, 1083
Psp1406I	AACGTT	1 cut(s)	1042
Psp5II	RGGWCCY	1 cut(s)	80
Psp6I	CCWGG	2 cut(s)	319, 1308
PspGI	CCWGG	2 cut(s)	319, 1308
PspN4I	GGNNCC	1 cut(s)	417
PspPI	GGNCC	3 cut(s)	80, 536, 1235
PspPPI	RGGWCCY	1 cut(s)	80
PstNI	CAGNNNCTG	2 cut(s)	821, 1213
PsuI	RGATCY	2 cut(s)	158, 1137
PteI	GCGCGC	2 cut(s)	758, 760
PvuII	CAGCTG	2 cut(s)	973, 1037
RsaI	GTAC	3 cut(s)	699, 1403, 1509
RsaNI	GTAC	3 cut(s)	698, 1402, 1508
RseI	CAYNNNNRTG	2 cut(s)	957, 1088
SacI	GAGCTC	2 cut(s)	885, 1083
SaqAI	TTAA	3 cut(s)	147, 1094, 1415
Sau3AI	GATC	5 cut(s)	158, 365, 466, 919, 1137
Sau96I	GGNCC	3 cut(s)	80, 536, 1235
ScaI	AGTACT	1 cut(s)	1403
SchI	GAGTC	5 cut(s)	19, 337, 353, 719, 1024
ScrFI	CCNGG	2 cut(s)	321, 1310
SduI	GDGCHC	3 cut(s)	885, 1083, 1423
SfaNI	GCATC	5 cut(s)	484, 563, 613, 1370, 1448
SinI	GGWCC	2 cut(s)	80, 536
SmiMI	CAYNNNNRTG	2 cut(s)	957, 1088
SmlI	CTYRAG	3 cut(s)	222, 737, 1185
SmoI	CTYRAG	3 cut(s)	222, 737, 1185
SpeI	ACTAGT	1 cut(s)	928
SphI	GCATGC	1 cut(s)	1255
Sse9I	AATT	8 cut(s)	192, 410, 482, 503, 522, 541, 1127, 1318
SseBI	AGGCCT	1 cut(s)	265
SspI	AATATT	1 cut(s)	828
SspMI	CTAG	5 cut(s)	77, 707, 854, 929, 1193
SstI	GAGCTC	2 cut(s)	885, 1083
StuI	AGGCCT	1 cut(s)	265
StyD4I	CCNGG	2 cut(s)	319, 1308
TaaI	ACNGT	3 cut(s)	1104, 1155, 1363
TaiI	ACGT	3 cut(s)	643, 1045, 1351
TaqI	TCGA	4 cut(s)	16, 925, 1245, 1444
TasI	AATT	8 cut(s)	192, 410, 482, 503, 522, 541, 1127, 1318
TatI	WGTACW	2 cut(s)	697, 1401
TauI	GCSGC	4 cut(s)	8, 38, 202, 678
TfiI	GAWTC	2 cut(s)	306, 1522
Tru1I	TTAA	3 cut(s)	147, 1094, 1415
Tru9I	TTAA	3 cut(s)	147, 1094, 1415
TscAI	CASTG	1 cut(s)	52
TseFI	GTSAC	1 cut(s)	527
TseI	GCWGC	8 cut(s)	269, 458, 662, 703, 821, 986, 1198, 1373
Tsp45I	GTSAC	1 cut(s)	527
TspDTI	ATGAA	7 cut(s)	104, 137, 231, 975, 1120, 1193, 1328
TspGWI	ACGGA	1 cut(s)	954
TspRI	CASTG	1 cut(s)	52
VpaK11BI	GGWCC	2 cut(s)	80, 536
XbaI	TCTAGA	1 cut(s)	1192
XceI	RCATGY	2 cut(s)	98, 1255
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1013
XmnI	GAANNNNTTC	1 cut(s)	1526
XspI	CTAG	5 cut(s)	77, 707, 854, 929, 1193
ZrmI	AGTACT	1 cut(s)	1403

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.