AT1G09910

Rhamnogalacturonate lyase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
OG0014889
Physical Location & Seq
Reverse (-)
3220035 .. 3224541
4507 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G09910.2

Sequence Viewer

Length: 2028 bp
ATGAAGAAACTGGCTGATCGGCTCCTTCATCGTTTTACTAATCATGAAACCGCTTTAAACGCCGGCCACCACTGCTCAGAGGGGACAGATCAAGGTACAAGTGGTCTTAGTCATAGGAAGGATCACAGGATGTCCTCTCATGGTGTCCACCTGCATGTCCATGATCGATATGTTGTGATGGACAATGGGATCCTCCAAGTTACACTGTCAAAGCCAGGTGGAATTATCACTGGGATAGAGTATAACGGTATTGACAATGTGCTCGAAGTTCGTAACAAGGAGACTAACAGAGGGTACTGGGACCTGCACTGGAATGAACCTGGAGGCAAGGGAATATTTGATGTCATCAGTGGAGTGACTTTCAGGGTCATAGTCGAGACCGAAGAACAGGTTGAGATCTCATTTCTAAGAACATGGGATCCATCCCTTGAGGGCAAGTACATTCCCTTGAATATCGATAAAAGGTTTATAATGCTCCGTGGCTCTTCTGGAGTGTACTCATACGGCATTTATGAACATCTTAAGGATTGGCCTGGCTTTGAACTTGGAGAAACTAGAATTGCCTTCAAGCTCAGAAAAGACAAATTCCATTACATGGCTGTGGCAGATGACAGAAAAAGGATAATGCCTTTTCCAGATGATCTATGCAAAGGAAGATGCCAAACTCTAGATTACCAGGAAGCTTCTCTGCTCACTGCTCCTTGTGATCCACGCCTACAAGGCGAAGTAGATGATAAATACCAATATTCGTGTGAGAATAAGGATCTGAGAGTACATGGATGGATATCCTTCGATCCACCAGTAGGATTTTGGCAAATTACGCCCAGTAATGAGTTCCGCTCAGGCGGACCACTCAAACAAAACCTGACTTCACATGTTGGCCCAACCACTCTTGCAGTGTTTCACAGTACTCATTATGCTGGAAAAACCATGATGCCTCGTTTTGAACACGGTGAGCCTTGGAAGAAAGTCTATGGCCCTGTTTTCATTTACCTAAATTCCACAGCCAATGGAGATGATCCACTTTGCTTATGGGACGATGCTAAGATAAAGATGATGGCTGAGGTTGAAAGGTGGCCTTATAGCTTTGTGGCATCTGACGACTATCCAAAGTCTGAAGAACGTGGCACAGCCCGTGGTAGATTACTTATCCGTGACAGGTTCATAAACAATGATTTGATTTCAGCAAGAGGTGCTTATGTTGGTTTGGCTCCGCCTGGTGATTCTGGTTCTTGGCAAATTGAATGCAAGGGATACCAATTTTGGGCTATTGCGGATGAGGCTGGCTATTTCTCGATAGGGAACGTGCGTCCTGGCGAGTATAATCTCTATGCTTGGGTCCCCAGTTTCATTGGAGATTATCACAACGGCACAATTGTTAGAGTGACTTCAGGTTGCATGATTGAGATGGGTGATATCGTTTATGAACCTCCAAGAGATGGACCTACATTATGGGAAATCGGTATCCCTGACCGAAAAGCTTCTGAGTTCTTTATCCCAGATCCTGATCCCACTCTTGTAAACAGGGTGTTAGTCCATCACCAAGACAGGTTCAGGCAATATGGGTTATGGAAGAAATACACAGATATGTATCCAAATGATGACCTTGTTTACACTGTCGGTGTGAGTGATTACCGCAGAGACTGGTTCTTTGCTCATGTTCCCAGGAAGAAAGGAGATGTGCATGAAGGAACAACTTGGCAGATTATATTTAATCTTGAAAACATCGATCAAAAGGCCAATTACAAACTGCGAGTCGCCATAGCATCTGCAACCTTAGCCGAGTTGCAGATTCGAATCAATGATGCGGAAGCAATCCGCCCTCTCTTCACAACCGGACTCATTGGGAGAGACAACTCAATAGCGAGGCACGGGATCCACGGGGTTTACATGCTGTATGCGGTGAACATACCGGGTAACCGGCTTGTGCAAGGTGATAATACTATATTCCTGAAACAGCCAAGATGCAATGGTCCCTTTCAAGGGATAATGTATGACTACATTCGTCTTGAAGGCCCTCCTTCTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
CBM-like Rhamnogal_lyase fn3_3

Protein Analysis

675

Amino Acids

77.09

Weight (kDa)

6.28

Isoelectric Point (pI)

30.02

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Rhamnogal_lyase PF06045 4 - 200 1.7e-88 Rhamnogalacturonate lyase family
fn3_3 PF14686 353 - 425 4.2e-25 Polysaccharide lyase family 4, domain II
CBM-like PF14683 440 - 627 2e-50 Polysaccharide lyase family 4, domain III
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0014889)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G09910 AT1G09910 AT1G09910
fragaria_vesca FvH4_5g34110 FvH4_5g34110
malus_domestica MD08G1205900.v1.1
prunus_persica Prupe.1G538400_v2.0.a1 Prupe.1G538400_v2.0.a1
pyrus_communis pycom08g17810 pycom15g34900
rosa_chinensis RchiOBHm_Chr7g0233611
rosa_laevigata RLG00000001249
rosa_rugosa Rorug07G0281500 Rorug07G0281600
rosa_samantha Rh7AG438100 Rh7BG410800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 470
AarI CACCTGC 1 cut(s) 159
Acc36I ACCTGC 2 cut(s) 159, 312
AccB7I CCANNNNNTGG 2 cut(s) 595, 1439
AccBSI CCGCTC 1 cut(s) 840
AciI CCGC 9 cut(s) 51, 838, 846, 1214, 1274, 1636, 1808, 1819, 1901
AcoI YGGCCR 1 cut(s) 64
AcsI RAATTY 2 cut(s) 584, 997
AcuI CTGAAG 2 cut(s) 1137, 1374
AfaI GTAC 6 cut(s) 97, 296, 440, 497, 774, 910
AfiI CCNNNNNNNGG 6 cut(s) 595, 803, 1264, 1439, 1982, 1983
AflII CTTAAG 1 cut(s) 521
AflIII ACRYGT 1 cut(s) 874
AgsI TTSAA 9 cut(s) 451, 542, 568, 947, 1070, 1244, 1721, 1982, 2012
AjnI CCWGG 7 cut(s) 214, 319, 532, 675, 1216, 1312, 1664
AloI GAACNNNNNNTCC 2 cut(s) 403, 435
AluBI AGCT 4 cut(s) 571, 683, 1086, 1481
AluI AGCT 4 cut(s) 571, 683, 1086, 1481
Alw21I GWGCWC 1 cut(s) 264
Alw26I GTCTC 4 cut(s) 275, 371, 1635, 1845
AlwNI CAGNNNCTG 2 cut(s) 1505, 1644
AoxI GGCC 7 cut(s) 64, 530, 880, 976, 1076, 1737, 2014
ApoI RAATTY 2 cut(s) 584, 997
ArsI GACNNNNNNTTYG 4 cut(s) 1634, 1666, 1740, 1772
Asp700I GAANNNNTTC 1 cut(s) 1480
AspS9I GGNCC 8 cut(s) 301, 848, 881, 977, 1339, 1442, 1973, 2015
AsuC2I CCSGG 1 cut(s) 1914
AsuHPI GGTGA 6 cut(s) 965, 1232, 1424, 1532, 1915, 1946
AsuII TTCGAA 1 cut(s) 1795
AvaII GGWCC 5 cut(s) 301, 848, 1339, 1442, 1973
BamHI GGATCC 3 cut(s) 189, 418, 1875
Bbv12I GWGCWC 1 cut(s) 264
BbvCI CCTCAGC 1 cut(s) 1062
BccI CCATC 7 cut(s) 172, 430, 774, 1051, 1402, 1433, 1545
BceAI ACGGC 2 cut(s) 520, 1384
BciT130I CCWGG 7 cut(s) 216, 321, 534, 677, 1218, 1314, 1666
BciVI GTATCC 3 cut(s) 1247, 1475, 1602
BcnI CCSGG 1 cut(s) 1914
BcoDI GTCTC 4 cut(s) 275, 371, 1635, 1845
BfaI CTAG 2 cut(s) 555, 668
BfrI CTTAAG 1 cut(s) 521
BfuAI ACCTGC 2 cut(s) 159, 312
BfuI GTATCC 3 cut(s) 1247, 1475, 1602
BglI GCCNNNNNGGC 1 cut(s) 720
BglII AGATCT 1 cut(s) 396
BmcAI AGTACT 1 cut(s) 910
Bme1390I CCNGG 8 cut(s) 216, 321, 534, 677, 1218, 1314, 1666, 1914
Bme18I GGWCC 5 cut(s) 301, 848, 1339, 1442, 1973
BmgT120I GGNCC 8 cut(s) 301, 848, 881, 977, 1339, 1442, 1973, 2015
BmiI GGNNCC 9 cut(s) 23, 191, 302, 420, 1212, 1340, 1341, 1877, 1975
BmrFI CCNGG 8 cut(s) 216, 321, 534, 677, 1218, 1314, 1666, 1914
BmrI ACTGGG 4 cut(s) 240, 307, 819, 1338
BmsI GCATC 7 cut(s) 647, 924, 1030, 1103, 1775, 1795, 1955
BmuI ACTGGG 4 cut(s) 240, 307, 819, 1338
BplI GAGNNNNNCTC 2 cut(s) 824, 856
BpmI CTGGAG 2 cut(s) 342, 510
Bpu10I CCTNAGC 3 cut(s) 841, 1062, 1777
Bpu14I TTCGAA 1 cut(s) 1795
BpuEI CTTGAG 1 cut(s) 449
BpuMI CCSGG 1 cut(s) 1914
Bsa29I ATCGAT 3 cut(s) 166, 456, 1728
BsaBI GATNNNNATC 4 cut(s) 784, 1506, 1590, 1796
BsaI GGTCTC 1 cut(s) 371
BsaJI CCNNGG 5 cut(s) 478, 959, 1135, 1664, 1879
BsaWI WCCGGW 1 cut(s) 1835
Bsc4I CCNNNNNNNGG 6 cut(s) 595, 803, 1264, 1439, 1982, 1983
Bse118I RCCGGY 2 cut(s) 62, 1920
Bse1I ACTGG 8 cut(s) 15, 235, 302, 314, 800, 825, 1344, 1649
Bse3DI GCAATG 1 cut(s) 1975
Bse8I GATNNNNATC 4 cut(s) 784, 1506, 1590, 1796
BseBI CCWGG 7 cut(s) 216, 321, 534, 677, 1218, 1314, 1666
BseCI ATCGAT 3 cut(s) 166, 456, 1728
BseDI CCNNGG 5 cut(s) 478, 959, 1135, 1664, 1879
BseGI GGATG 4 cut(s) 135, 422, 785, 1282
BseJI GATNNNNATC 4 cut(s) 784, 1506, 1590, 1796
BseLI CCNNNNNNNGG 6 cut(s) 595, 803, 1264, 1439, 1982, 1983
BseMI GCAATG 1 cut(s) 1975
BseMII CTCAG 6 cut(s) 90, 586, 758, 855, 1053, 1476
BseNI ACTGG 8 cut(s) 15, 235, 302, 314, 800, 825, 1344, 1649
BsgI GTGCAG 1 cut(s) 290
BshFI GGCC 7 cut(s) 66, 532, 882, 978, 1078, 1739, 2016
BshVI ATCGAT 3 cut(s) 166, 456, 1728
BsiHKAI GWGCWC 1 cut(s) 264
BsiSI CCGG 4 cut(s) 63, 1836, 1913, 1921
BslFI GGGAC 5 cut(s) 97, 314, 1049, 1325, 1959
BslI CCNNNNNNNGG 6 cut(s) 595, 803, 1264, 1439, 1982, 1983
BsmAI GTCTC 4 cut(s) 275, 371, 1635, 1845
BsmFI GGGAC 5 cut(s) 97, 314, 1049, 1325, 1959
BsmI GAATGC 1 cut(s) 1250
BsnI GGCC 7 cut(s) 66, 532, 882, 978, 1078, 1739, 2016
Bso31I GGTCTC 1 cut(s) 371
Bsp119I TTCGAA 1 cut(s) 1795
Bsp1286I GDGCHC 1 cut(s) 264
BspACI CCGC 9 cut(s) 51, 838, 846, 1214, 1274, 1636, 1808, 1819, 1901
BspANI GGCC 7 cut(s) 66, 532, 882, 978, 1078, 1739, 2016
BspCNI CTCAG 6 cut(s) 89, 585, 759, 854, 1054, 1477
BspDI ATCGAT 3 cut(s) 166, 456, 1728
BspHI TCATGA 1 cut(s) 43
BspLI GGNNCC 9 cut(s) 23, 191, 302, 420, 1212, 1340, 1341, 1877, 1975
BspMI ACCTGC 2 cut(s) 159, 312
BspQI GCTCTTC 1 cut(s) 490
BspT104I TTCGAA 1 cut(s) 1795
BspTI CTTAAG 1 cut(s) 521
BspTNI GGTCTC 1 cut(s) 371
BsrBI CCGCTC 1 cut(s) 840
BsrDI GCAATG 1 cut(s) 1975
BsrFI RCCGGY 2 cut(s) 62, 1920
BsrI ACTGG 8 cut(s) 15, 235, 302, 314, 800, 825, 1344, 1649
BssAI RCCGGY 2 cut(s) 62, 1920
BssECI CCNNGG 5 cut(s) 478, 959, 1135, 1664, 1879
BssT1I CCWWGG 1 cut(s) 959
Bst2UI CCWGG 7 cut(s) 216, 321, 534, 677, 1218, 1314, 1666
Bst4CI ACNGT 5 cut(s) 207, 248, 908, 953, 1618
Bst6I CTCTTC 2 cut(s) 490, 1832
BstAFI CTTAAG 1 cut(s) 521
BstAPI GCANNNNNTGC 1 cut(s) 1193
BstBI TTCGAA 1 cut(s) 1795
BstC8I GCNNGC 2 cut(s) 64, 1285
BstDSI CCRYGG 3 cut(s) 478, 1135, 1879
BstEII GGTNACC 1 cut(s) 1916
BstF5I GGATG 4 cut(s) 135, 422, 785, 1282
BstMAI GTCTC 4 cut(s) 275, 371, 1635, 1845
BstMWI GCNNNNNNNGC 7 cut(s) 59, 72, 720, 820, 1193, 1280, 1778
BstNI CCWGG 7 cut(s) 216, 321, 534, 677, 1218, 1314, 1666
BstNSI RCATGY 3 cut(s) 158, 878, 1894
BstPI GGTNACC 1 cut(s) 1916
BstSCI CCNGG 8 cut(s) 214, 319, 532, 675, 1216, 1312, 1664, 1912
BstX2I RGATCY 6 cut(s) 189, 396, 418, 763, 1501, 1875
BstYI RGATCY 6 cut(s) 189, 396, 418, 763, 1501, 1875
Bsu15I ATCGAT 3 cut(s) 166, 456, 1728
BsuI GTATCC 3 cut(s) 1247, 1475, 1602
BsuRI GGCC 7 cut(s) 66, 532, 882, 978, 1078, 1739, 2016
BsuTUI ATCGAT 3 cut(s) 166, 456, 1728
BtgI CCRYGG 3 cut(s) 478, 1135, 1879
BtsCI GGATG 4 cut(s) 135, 422, 785, 1282
BtsI GCAGTG 3 cut(s) 70, 693, 903
BtsIMutI CAGTG 8 cut(s) 70, 203, 228, 307, 355, 693, 903, 1614
BveI ACCTGC 2 cut(s) 159, 312
Cac8I GCNNGC 2 cut(s) 64, 1285
CaiI CAGNNNCTG 2 cut(s) 1505, 1644
CciI TCATGA 1 cut(s) 43
Cfr10I RCCGGY 2 cut(s) 62, 1920
Cfr13I GGNCC 8 cut(s) 301, 848, 881, 977, 1339, 1442, 1973, 2015
ClaI ATCGAT 3 cut(s) 166, 456, 1728
CseI GACGC 1 cut(s) 1298
Csp6I GTAC 6 cut(s) 96, 295, 439, 496, 773, 909
CviQI GTAC 6 cut(s) 96, 295, 439, 496, 773, 909
DraI TTTAAA 1 cut(s) 57
EaeI YGGCCR 1 cut(s) 64
Eam1104I CTCTTC 2 cut(s) 490, 1832
EarI CTCTTC 2 cut(s) 490, 1832
EciI GGCGGA 3 cut(s) 861, 1203, 1808
Eco130I CCWWGG 1 cut(s) 959
Eco31I GGTCTC 1 cut(s) 371
Eco32I GATATC 2 cut(s) 786, 1417
Eco47I GGWCC 5 cut(s) 301, 848, 1339, 1442, 1973
Eco57I CTGAAG 2 cut(s) 1137, 1374
Eco91I GGTNACC 1 cut(s) 1916
EcoO109I RGGNCCY 3 cut(s) 301, 1339, 2015
EcoO65I GGTNACC 1 cut(s) 1916
EcoRII CCWGG 7 cut(s) 214, 319, 532, 675, 1216, 1312, 1664
EcoRV GATATC 2 cut(s) 786, 1417
EcoT14I CCWWGG 1 cut(s) 959
ErhI CCWWGG 1 cut(s) 959
FalI AAGNNNNNCTT 4 cut(s) 1063, 1095, 1180, 1212
FaqI GGGAC 5 cut(s) 97, 314, 1049, 1325, 1959
FokI GGATG 4 cut(s) 142, 409, 792, 1289
FspBI CTAG 2 cut(s) 555, 668
GsuI CTGGAG 2 cut(s) 342, 510
HaeIII GGCC 7 cut(s) 66, 532, 882, 978, 1078, 1739, 2016
HapII CCGG 4 cut(s) 63, 1836, 1913, 1921
HgaI GACGC 1 cut(s) 1298
HindIII AAGCTT 2 cut(s) 681, 1479
HinfI GANTC 5 cut(s) 1223, 1755, 1792, 1797, 1839
HpaII CCGG 4 cut(s) 63, 1836, 1913, 1921
HphI GGTGA 6 cut(s) 965, 1232, 1424, 1532, 1915, 1946
Hpy166II GTNNAC 6 cut(s) 148, 496, 1522, 1612, 1888, 1906
Hpy188I TCNGA 6 cut(s) 79, 575, 768, 1099, 1117, 1486
Hpy8I GTNNAC 6 cut(s) 148, 496, 1522, 1612, 1888, 1906
HpyAV CCTTC 6 cut(s) 35, 112, 574, 799, 1682, 2006
HpyCH4III ACNGT 5 cut(s) 207, 248, 908, 953, 1618
HpyCH4IV ACGT 2 cut(s) 1123, 1305
HpyF10VI GCNNNNNNNGC 7 cut(s) 59, 72, 720, 820, 1193, 1280, 1778
HpySE526I ACGT 2 cut(s) 1123, 1305
KflI GGGWCCC 1 cut(s) 1339
KroI GCCGGC 1 cut(s) 62
KroNI GCCGGC 1 cut(s) 64
LguI GCTCTTC 1 cut(s) 490
LmnI GCTCC 4 cut(s) 27, 480, 703, 1216
LweI GCATC 7 cut(s) 647, 924, 1030, 1103, 1775, 1795, 1955
MaeI CTAG 2 cut(s) 555, 668
MaeII ACGT 2 cut(s) 1123, 1305
MaeIII GTNAC 6 cut(s) 199, 272, 355, 1154, 1384, 1916
MbiI CCGCTC 1 cut(s) 840
MboII GAAGA 9 cut(s) 16, 395, 477, 666, 976, 1130, 1585, 1681, 1819
MfeI CAATTG 1 cut(s) 1374
MflI RGATCY 6 cut(s) 189, 396, 418, 763, 1501, 1875
MhlI GDGCHC 1 cut(s) 264
MluCI AATT 9 cut(s) 222, 558, 584, 816, 997, 1239, 1259, 1374, 1741
MlyI GAGTC 2 cut(s) 1764, 1833
MroNI GCCGGC 1 cut(s) 62
MroXI GAANNNNTTC 1 cut(s) 1480
MseI TTAA 3 cut(s) 56, 522, 1713
MslI CAYNNNNRTG 5 cut(s) 153, 159, 312, 599, 1586
MspCI CTTAAG 1 cut(s) 521
MspI CCGG 4 cut(s) 63, 1836, 1913, 1921
MspR9I CCNGG 8 cut(s) 216, 321, 534, 677, 1218, 1314, 1666, 1914
MunI CAATTG 1 cut(s) 1374
Mva1269I GAATGC 1 cut(s) 1250
MvaI CCWGG 7 cut(s) 216, 321, 534, 677, 1218, 1314, 1666
MwoI GCNNNNNNNGC 7 cut(s) 59, 72, 720, 820, 1193, 1280, 1778
NaeI GCCGGC 1 cut(s) 64
NciI CCSGG 1 cut(s) 1914
NgoMIV GCCGGC 1 cut(s) 62
NlaIV GGNNCC 9 cut(s) 23, 191, 302, 420, 1212, 1340, 1341, 1877, 1975
NmeAIII GCCGAG 1 cut(s) 1807
NmuCI GTSAC 3 cut(s) 355, 1154, 1384
NspI RCATGY 3 cut(s) 158, 878, 1894
NspV TTCGAA 1 cut(s) 1795
PagI TCATGA 1 cut(s) 43
PaqCI CACCTGC 1 cut(s) 159
PciI ACATGT 1 cut(s) 874
PciSI GCTCTTC 1 cut(s) 490
PctI GAATGC 1 cut(s) 1250
PdiI GCCGGC 1 cut(s) 64
PdmI GAANNNNTTC 1 cut(s) 1480
PfeI GAWTC 3 cut(s) 1223, 1792, 1797
PflMI CCANNNNNTGG 2 cut(s) 595, 1439
PleI GAGTC 2 cut(s) 1763, 1833
PpsI GAGTC 2 cut(s) 1763, 1833
PpuMI RGGWCCY 2 cut(s) 301, 1339
PscI ACATGT 1 cut(s) 874
PsiI TTATAA 1 cut(s) 470
Psp5II RGGWCCY 2 cut(s) 301, 1339
Psp6I CCWGG 7 cut(s) 214, 319, 532, 675, 1216, 1312, 1664
PspEI GGTNACC 1 cut(s) 1916
PspGI CCWGG 7 cut(s) 214, 319, 532, 675, 1216, 1312, 1664
PspN4I GGNNCC 9 cut(s) 23, 191, 302, 420, 1212, 1340, 1341, 1877, 1975
PspPI GGNCC 8 cut(s) 301, 848, 881, 977, 1339, 1442, 1973, 2015
PspPPI RGGWCCY 2 cut(s) 301, 1339
PstNI CAGNNNCTG 2 cut(s) 1505, 1644
PsuI RGATCY 6 cut(s) 189, 396, 418, 763, 1501, 1875
RsaI GTAC 6 cut(s) 97, 296, 440, 497, 774, 910
RsaNI GTAC 6 cut(s) 96, 295, 439, 496, 773, 909
RseI CAYNNNNRTG 5 cut(s) 153, 159, 312, 599, 1586
SapI GCTCTTC 1 cut(s) 490
SaqAI TTAA 3 cut(s) 56, 522, 1713
Sau96I GGNCC 8 cut(s) 301, 848, 881, 977, 1339, 1442, 1973, 2015
ScaI AGTACT 1 cut(s) 910
SchI GAGTC 2 cut(s) 1764, 1833
ScrFI CCNGG 8 cut(s) 216, 321, 534, 677, 1218, 1314, 1666, 1914
SduI GDGCHC 1 cut(s) 264
SfaNI GCATC 7 cut(s) 647, 924, 1030, 1103, 1775, 1795, 1955
SfuI TTCGAA 1 cut(s) 1795
SinI GGWCC 5 cut(s) 301, 848, 1339, 1442, 1973
SmiMI CAYNNNNRTG 5 cut(s) 153, 159, 312, 599, 1586
SmlI CTYRAG 2 cut(s) 428, 521
SmoI CTYRAG 2 cut(s) 428, 521
Sse9I AATT 9 cut(s) 222, 558, 584, 816, 997, 1239, 1259, 1374, 1741
SsiI CCGC 9 cut(s) 51, 838, 846, 1214, 1274, 1636, 1808, 1819, 1901
SspI AATATT 2 cut(s) 336, 746
SspMI CTAG 2 cut(s) 555, 668
StyD4I CCNGG 8 cut(s) 214, 319, 532, 675, 1216, 1312, 1664, 1912
StyI CCWWGG 1 cut(s) 959
TaaI ACNGT 5 cut(s) 207, 248, 908, 953, 1618
TaiI ACGT 2 cut(s) 1126, 1308
TaqI TCGA 8 cut(s) 166, 264, 375, 456, 792, 1295, 1728, 1795
TaqII GACCGA 2 cut(s) 395, 1488
TasI AATT 9 cut(s) 222, 558, 584, 816, 997, 1239, 1259, 1374, 1741
TatI WGTACW 4 cut(s) 438, 495, 772, 908
TfiI GAWTC 3 cut(s) 1223, 1792, 1797
Tru1I TTAA 3 cut(s) 56, 522, 1713
Tru9I TTAA 3 cut(s) 56, 522, 1713
TscAI CASTG 8 cut(s) 77, 210, 235, 314, 355, 700, 903, 1621
TseFI GTSAC 3 cut(s) 355, 1154, 1384
Tsp45I GTSAC 3 cut(s) 355, 1154, 1384
TspGWI ACGGA 2 cut(s) 467, 1142
TspRI CASTG 8 cut(s) 77, 210, 235, 314, 355, 700, 903, 1621
Van91I CCANNNNNTGG 2 cut(s) 595, 1439
Vha464I CTTAAG 1 cut(s) 521
VpaK11BI GGWCC 5 cut(s) 301, 848, 1339, 1442, 1973
XapI RAATTY 2 cut(s) 584, 997
XbaI TCTAGA 1 cut(s) 667
XceI RCATGY 3 cut(s) 158, 878, 1894
XcmI CCANNNNNNNNNTGG 2 cut(s) 807, 1029
XmnI GAANNNNTTC 1 cut(s) 1480
XspI CTAG 2 cut(s) 555, 668
ZrmI AGTACT 1 cut(s) 910
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.