Polysaccharide lyase family 4, domain III
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G09910 AT1G09910 AT1G09910 |
| fragaria_vesca | FvH4_5g34110 FvH4_5g34110 |
| malus_domestica | MD08G1205900.v1.1 |
| prunus_persica | Prupe.1G538400_v2.0.a1 Prupe.1G538400_v2.0.a1 |
| pyrus_communis | pycom08g17810 pycom15g34900 |
| rosa_chinensis | RchiOBHm_Chr7g0233611 |
| rosa_laevigata | RLG00000001249 |
| rosa_rugosa | Rorug07G0281500 Rorug07G0281600 |
| rosa_samantha | Rh7AG438100 Rh7BG410800 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 1723 |
| AccB1I | GGYRCC | 2 cut(s) | 877, 1859 |
| AccB7I | CCANNNNNTGG | 4 cut(s) | 538, 610, 1382, 1970 |
| AccI | GTMKAC | 1 cut(s) | 1084 |
| AciI | CCGC | 4 cut(s) | 91, 863, 947, 1422 |
| AcoI | YGGCCR | 1 cut(s) | 1019 |
| AcsI | RAATTY | 2 cut(s) | 776, 884 |
| AcuI | CTGAAG | 1 cut(s) | 485 |
| AdeI | CACNNNGTG | 1 cut(s) | 770 |
| AfaI | GTAC | 6 cut(s) | 298, 683, 689, 1255, 1684, 1854 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 538, 610, 746, 1057, 1382, 1925, 1970 |
| AflIII | ACRYGT | 2 cut(s) | 817, 1627 |
| AgeI | ACCGGT | 1 cut(s) | 1305 |
| AgsI | TTSAA | 7 cut(s) | 22, 49, 209, 511, 1657, 1843, 1955 |
| AjnI | CCWGG | 7 cut(s) | 262, 592, 609, 1159, 1277, 1285, 1607 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 346, 378 |
| AluBI | AGCT | 8 cut(s) | 340, 626, 658, 1017, 1037, 1471, 1724, 1867 |
| AluI | AGCT | 8 cut(s) | 340, 626, 658, 1017, 1037, 1471, 1724, 1867 |
| Alw21I | GWGCWC | 2 cut(s) | 342, 462 |
| Alw26I | GTCTC | 2 cut(s) | 69, 1804 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 610, 626, 1040 |
| Ama87I | CYCGRG | 1 cut(s) | 430 |
| AoxI | GGCC | 6 cut(s) | 473, 823, 919, 1019, 1385, 1957 |
| ApeKI | GCWGC | 1 cut(s) | 1424 |
| ApoI | RAATTY | 2 cut(s) | 776, 884 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 392, 424 |
| AseI | ATTAAT | 1 cut(s) | 1464 |
| AsiGI | ACCGGT | 1 cut(s) | 1305 |
| AspS9I | GGNCC | 9 cut(s) | 107, 244, 260, 791, 824, 920, 1282, 1385, 1958 |
| AsuC2I | CCSGG | 1 cut(s) | 1857 |
| AsuHPI | GGTGA | 6 cut(s) | 136, 163, 503, 908, 1367, 1889 |
| AvaI | CYCGRG | 1 cut(s) | 430 |
| AvaII | GGWCC | 5 cut(s) | 107, 244, 260, 791, 1282 |
| AxyI | CCTNAGG | 1 cut(s) | 1333 |
| BaeGI | GKGCMC | 1 cut(s) | 1864 |
| BalI | TGGCCA | 1 cut(s) | 1021 |
| BamHI | GGATCC | 1 cut(s) | 361 |
| BanI | GGYRCC | 2 cut(s) | 877, 1859 |
| BanII | GRGCYC | 1 cut(s) | 342 |
| BarI | GAAGNNNNNNTAC | 4 cut(s) | 615, 647, 1107, 1139 |
| Bbv12I | GWGCWC | 2 cut(s) | 342, 462 |
| BbvI | GCAGC | 1 cut(s) | 1411 |
| BccI | CCATC | 4 cut(s) | 155, 994, 1376, 1972 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1736, 1770 |
| BciT130I | CCWGG | 7 cut(s) | 264, 594, 611, 1161, 1279, 1287, 1609 |
| BcnI | CCSGG | 1 cut(s) | 1857 |
| BcoDI | GTCTC | 2 cut(s) | 69, 1804 |
| BfaI | CTAG | 2 cut(s) | 1361, 1721 |
| BfmI | CTRYAG | 1 cut(s) | 1425 |
| BfuAI | ACCTGC | 1 cut(s) | 1723 |
| BglII | AGATCT | 1 cut(s) | 871 |
| BisI | GCNGC | 1 cut(s) | 1425 |
| BlsI | GCNGC | 1 cut(s) | 1426 |
| BmcAI | AGTACT | 1 cut(s) | 689 |
| Bme1390I | CCNGG | 8 cut(s) | 264, 594, 611, 1161, 1279, 1287, 1609, 1857 |
| Bme18I | GGWCC | 5 cut(s) | 107, 244, 260, 791, 1282 |
| BmeT110I | CYCGRG | 1 cut(s) | 430 |
| BmgT120I | GGNCC | 9 cut(s) | 107, 244, 260, 791, 824, 920, 1282, 1385, 1958 |
| BmrFI | CCNGG | 8 cut(s) | 264, 594, 611, 1161, 1279, 1287, 1609, 1857 |
| BmsI | GCATC | 7 cut(s) | 579, 590, 639, 973, 1126, 1718, 1898 |
| BpmI | CTGGAG | 1 cut(s) | 274 |
| BpuEI | CTTGAG | 1 cut(s) | 392 |
| BpuMI | CCSGG | 1 cut(s) | 1857 |
| BsaBI | GATNNNNATC | 2 cut(s) | 22, 1449 |
| BsaJI | CCNNGG | 7 cut(s) | 429, 609, 902, 1278, 1285, 1607, 1924 |
| BsaWI | WCCGGW | 4 cut(s) | 173, 585, 780, 1305 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 538, 610, 746, 1057, 1382, 1925, 1970 |
| Bse118I | RCCGGY | 1 cut(s) | 1305 |
| Bse1I | ACTGG | 7 cut(s) | 685, 743, 1084, 1261, 1783, 1838, 1914 |
| Bse21I | CCTNAGG | 1 cut(s) | 1333 |
| Bse3DI | GCAATG | 1 cut(s) | 846 |
| Bse8I | GATNNNNATC | 2 cut(s) | 22, 1449 |
| BseBI | CCWGG | 7 cut(s) | 264, 594, 611, 1161, 1279, 1287, 1609 |
| BseDI | CCNNGG | 7 cut(s) | 429, 609, 902, 1278, 1285, 1607, 1924 |
| BseGI | GGATG | 3 cut(s) | 594, 988, 1483 |
| BseJI | GATNNNNATC | 2 cut(s) | 22, 1449 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 538, 610, 746, 1057, 1382, 1925, 1970 |
| BseMI | GCAATG | 1 cut(s) | 846 |
| BseMII | CTCAG | 6 cut(s) | 80, 506, 1032, 1347, 1613, 1815 |
| BseNI | ACTGG | 7 cut(s) | 685, 743, 1084, 1261, 1783, 1838, 1914 |
| BseSI | GKGCMC | 1 cut(s) | 1864 |
| BseXI | GCAGC | 1 cut(s) | 1411 |
| BseYI | CCCAGC | 1 cut(s) | 1863 |
| BsgI | GTGCAG | 1 cut(s) | 102 |
| BshFI | GGCC | 6 cut(s) | 475, 825, 921, 1021, 1387, 1959 |
| BshNI | GGYRCC | 2 cut(s) | 877, 1859 |
| BshTI | ACCGGT | 1 cut(s) | 1305 |
| BsiHKAI | GWGCWC | 2 cut(s) | 342, 462 |
| BsiHKCI | CYCGRG | 1 cut(s) | 430 |
| BsiSI | CCGG | 6 cut(s) | 174, 586, 663, 781, 1306, 1856 |
| BslFI | GGGAC | 4 cut(s) | 93, 257, 879, 1268 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 538, 610, 746, 1057, 1382, 1925, 1970 |
| BsmAI | GTCTC | 2 cut(s) | 69, 1804 |
| BsmFI | GGGAC | 4 cut(s) | 93, 257, 879, 1268 |
| BsmI | GAATGC | 2 cut(s) | 1193, 1407 |
| BsnI | GGCC | 6 cut(s) | 475, 825, 921, 1021, 1387, 1959 |
| BsoBI | CYCGRG | 1 cut(s) | 430 |
| Bsp1286I | GDGCHC | 3 cut(s) | 342, 462, 1864 |
| Bsp19I | CCATGG | 1 cut(s) | 902 |
| BspACI | CCGC | 4 cut(s) | 91, 863, 947, 1422 |
| BspANI | GGCC | 6 cut(s) | 475, 825, 921, 1021, 1387, 1959 |
| BspCNI | CTCAG | 6 cut(s) | 79, 507, 1033, 1346, 1612, 1814 |
| BspHI | TCATGA | 1 cut(s) | 1540 |
| BspMAI | CTGCAG | 1 cut(s) | 1429 |
| BspMI | ACCTGC | 1 cut(s) | 1723 |
| BspT107I | GGYRCC | 2 cut(s) | 877, 1859 |
| BsrDI | GCAATG | 1 cut(s) | 846 |
| BsrFI | RCCGGY | 1 cut(s) | 1305 |
| BsrI | ACTGG | 7 cut(s) | 685, 743, 1084, 1261, 1783, 1838, 1914 |
| BssAI | RCCGGY | 1 cut(s) | 1305 |
| BssECI | CCNNGG | 7 cut(s) | 429, 609, 902, 1278, 1285, 1607, 1924 |
| BssT1I | CCWWGG | 2 cut(s) | 902, 1924 |
| Bst2UI | CCWGG | 7 cut(s) | 264, 594, 611, 1161, 1279, 1287, 1609 |
| Bst4CI | ACNGT | 2 cut(s) | 1561, 1682 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1136 |
| BstC8I | GCNNGC | 3 cut(s) | 605, 660, 1019 |
| BstDEI | CTNAG | 6 cut(s) | 66, 515, 1041, 1333, 1599, 1801 |
| BstDSI | CCRYGG | 1 cut(s) | 902 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1923 |
| BstF5I | GGATG | 3 cut(s) | 594, 988, 1483 |
| BstMAI | GTCTC | 2 cut(s) | 69, 1804 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 1136, 1721 |
| BstNI | CCWGG | 7 cut(s) | 264, 594, 611, 1161, 1279, 1287, 1609 |
| BstNSI | RCATGY | 3 cut(s) | 571, 821, 1631 |
| BstSCI | CCNGG | 8 cut(s) | 262, 592, 609, 1159, 1277, 1285, 1607, 1855 |
| BstSFI | CTRYAG | 1 cut(s) | 1425 |
| BstSLI | GKGCMC | 1 cut(s) | 1864 |
| BstV1I | GCAGC | 1 cut(s) | 1411 |
| BstX2I | RGATCY | 3 cut(s) | 361, 871, 1827 |
| BstYI | RGATCY | 3 cut(s) | 361, 871, 1827 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1333 |
| BsuRI | GGCC | 6 cut(s) | 475, 825, 921, 1021, 1387, 1959 |
| BtgI | CCRYGG | 1 cut(s) | 902 |
| BtsCI | GGATG | 3 cut(s) | 594, 988, 1483 |
| BveI | ACCTGC | 1 cut(s) | 1723 |
| Cac8I | GCNNGC | 3 cut(s) | 605, 660, 1019 |
| CaiI | CAGNNNCTG | 3 cut(s) | 610, 626, 1040 |
| CciI | TCATGA | 1 cut(s) | 1540 |
| Cfr10I | RCCGGY | 1 cut(s) | 1305 |
| Cfr13I | GGNCC | 9 cut(s) | 107, 244, 260, 791, 824, 920, 1282, 1385, 1958 |
| Csp6I | GTAC | 6 cut(s) | 297, 682, 688, 1254, 1683, 1853 |
| CspAI | ACCGGT | 1 cut(s) | 1305 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 817, 852 |
| CviQI | GTAC | 6 cut(s) | 297, 682, 688, 1254, 1683, 1853 |
| DdeI | CTNAG | 6 cut(s) | 66, 515, 1041, 1333, 1599, 1801 |
| DraIII | CACNNNGTG | 1 cut(s) | 770 |
| EaeI | YGGCCR | 1 cut(s) | 1019 |
| Ecl136II | GAGCTC | 1 cut(s) | 340 |
| Eco130I | CCWWGG | 2 cut(s) | 902, 1924 |
| Eco24I | GRGCYC | 1 cut(s) | 342 |
| Eco47I | GGWCC | 5 cut(s) | 107, 244, 260, 791, 1282 |
| Eco53kI | GAGCTC | 1 cut(s) | 340 |
| Eco57I | CTGAAG | 1 cut(s) | 485 |
| Eco81I | CCTNAGG | 1 cut(s) | 1333 |
| Eco88I | CYCGRG | 1 cut(s) | 430 |
| EcoICRI | GAGCTC | 1 cut(s) | 340 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1923 |
| EcoO109I | RGGNCCY | 4 cut(s) | 107, 244, 1282, 1958 |
| EcoRI | GAATTC | 1 cut(s) | 776 |
| EcoRII | CCWGG | 7 cut(s) | 262, 592, 609, 1159, 1277, 1285, 1607 |
| EcoT14I | CCWWGG | 2 cut(s) | 902, 1924 |
| EcoT38I | GRGCYC | 1 cut(s) | 342 |
| ErhI | CCWWGG | 2 cut(s) | 902, 1924 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 490, 522 |
| FaqI | GGGAC | 4 cut(s) | 93, 257, 879, 1268 |
| FauI | CCCGC | 2 cut(s) | 856, 940 |
| FauNDI | CATATG | 1 cut(s) | 1250 |
| FblI | GTMKAC | 1 cut(s) | 1084 |
| Fnu4HI | GCNGC | 1 cut(s) | 1425 |
| FokI | GGATG | 3 cut(s) | 601, 995, 1470 |
| FriOI | GRGCYC | 1 cut(s) | 342 |
| Fsp4HI | GCNGC | 1 cut(s) | 1425 |
| FspBI | CTAG | 2 cut(s) | 1361, 1721 |
| GluI | GCNGC | 1 cut(s) | 1425 |
| GsaI | CCCAGC | 1 cut(s) | 1867 |
| GsuI | CTGGAG | 1 cut(s) | 274 |
| HaeIII | GGCC | 6 cut(s) | 475, 825, 921, 1021, 1387, 1959 |
| HapII | CCGG | 6 cut(s) | 174, 586, 663, 781, 1306, 1856 |
| HindIII | AAGCTT | 1 cut(s) | 1469 |
| HinfI | GANTC | 5 cut(s) | 18, 62, 640, 805, 1603 |
| HpaII | CCGG | 6 cut(s) | 174, 586, 663, 781, 1306, 1856 |
| HphI | GGTGA | 6 cut(s) | 136, 163, 503, 908, 1367, 1889 |
| Hpy166II | GTNNAC | 7 cut(s) | 260, 348, 700, 791, 899, 1085, 1773 |
| Hpy188I | TCNGA | 8 cut(s) | 69, 550, 639, 798, 1042, 1060, 1455, 1602 |
| Hpy8I | GTNNAC | 7 cut(s) | 260, 348, 700, 791, 899, 1085, 1773 |
| HpyAV | CCTTC | 3 cut(s) | 460, 904, 1949 |
| HpyCH4III | ACNGT | 2 cut(s) | 1561, 1682 |
| HpyCH4IV | ACGT | 1 cut(s) | 356 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 1136, 1721 |
| HpyF3I | CTNAG | 6 cut(s) | 66, 515, 1041, 1333, 1599, 1801 |
| HpySE526I | ACGT | 1 cut(s) | 356 |
| KflI | GGGWCCC | 2 cut(s) | 107, 1282 |
| LmnI | GCTCC | 1 cut(s) | 1159 |
| Lsp1109I | GCAGC | 1 cut(s) | 1411 |
| LweI | GCATC | 7 cut(s) | 579, 590, 639, 973, 1126, 1718, 1898 |
| MaeI | CTAG | 2 cut(s) | 1361, 1721 |
| MaeII | ACGT | 1 cut(s) | 356 |
| MaeIII | GTNAC | 4 cut(s) | 142, 169, 1075, 1229 |
| MboII | GAAGA | 5 cut(s) | 609, 919, 1127, 1556, 1882 |
| MfeI | CAATTG | 1 cut(s) | 1704 |
| MflI | RGATCY | 3 cut(s) | 361, 871, 1827 |
| MhlI | GDGCHC | 3 cut(s) | 342, 462, 1864 |
| MlsI | TGGCCA | 1 cut(s) | 1021 |
| MluNI | TGGCCA | 1 cut(s) | 1021 |
| MlyI | GAGTC | 1 cut(s) | 71 |
| MmeI | TCCRAC | 2 cut(s) | 704, 1038 |
| Mox20I | TGGCCA | 1 cut(s) | 1021 |
| MscI | TGGCCA | 1 cut(s) | 1021 |
| Msp20I | TGGCCA | 1 cut(s) | 1021 |
| MspA1I | CMGCKG | 1 cut(s) | 1424 |
| MspI | CCGG | 6 cut(s) | 174, 586, 663, 781, 1306, 1856 |
| MspR9I | CCNGG | 8 cut(s) | 264, 594, 611, 1161, 1279, 1287, 1609, 1857 |
| MunI | CAATTG | 1 cut(s) | 1704 |
| Mva1269I | GAATGC | 2 cut(s) | 1193, 1407 |
| MvaI | CCWGG | 7 cut(s) | 264, 594, 611, 1161, 1279, 1287, 1609 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 1136, 1721 |
| NciI | CCSGG | 1 cut(s) | 1857 |
| NcoI | CCATGG | 1 cut(s) | 902 |
| NdeI | CATATG | 1 cut(s) | 1250 |
| NmuCI | GTSAC | 3 cut(s) | 142, 169, 1075 |
| NspI | RCATGY | 3 cut(s) | 571, 821, 1631 |
| PagI | TCATGA | 1 cut(s) | 1540 |
| PciI | ACATGT | 2 cut(s) | 817, 1627 |
| PctI | GAATGC | 2 cut(s) | 1193, 1407 |
| PfeI | GAWTC | 4 cut(s) | 18, 640, 805, 1603 |
| PflFI | GACNNNGTC | 2 cut(s) | 73, 248 |
| PflMI | CCANNNNNTGG | 4 cut(s) | 538, 610, 1382, 1970 |
| PinAI | ACCGGT | 1 cut(s) | 1305 |
| PkrI | GCNGC | 1 cut(s) | 1426 |
| PleI | GAGTC | 1 cut(s) | 70 |
| PpsI | GAGTC | 1 cut(s) | 70 |
| PpuMI | RGGWCCY | 3 cut(s) | 107, 244, 1282 |
| PscI | ACATGT | 2 cut(s) | 817, 1627 |
| PshBI | ATTAAT | 1 cut(s) | 1464 |
| Psp124BI | GAGCTC | 1 cut(s) | 342 |
| Psp5II | RGGWCCY | 3 cut(s) | 107, 244, 1282 |
| Psp6I | CCWGG | 7 cut(s) | 262, 592, 609, 1159, 1277, 1285, 1607 |
| PspFI | CCCAGC | 1 cut(s) | 1863 |
| PspGI | CCWGG | 7 cut(s) | 262, 592, 609, 1159, 1277, 1285, 1607 |
| PspPI | GGNCC | 9 cut(s) | 107, 244, 260, 791, 824, 920, 1282, 1385, 1958 |
| PspPPI | RGGWCCY | 3 cut(s) | 107, 244, 1282 |
| PstI | CTGCAG | 1 cut(s) | 1429 |
| PstNI | CAGNNNCTG | 3 cut(s) | 610, 626, 1040 |
| PsuI | RGATCY | 3 cut(s) | 361, 871, 1827 |
| PsyI | GACNNNGTC | 2 cut(s) | 73, 248 |
| RsaI | GTAC | 6 cut(s) | 298, 683, 689, 1255, 1684, 1854 |
| RsaNI | GTAC | 6 cut(s) | 297, 682, 688, 1254, 1683, 1853 |
| SacI | GAGCTC | 1 cut(s) | 342 |
| SatI | GCNGC | 1 cut(s) | 1425 |
| Sau96I | GGNCC | 9 cut(s) | 107, 244, 260, 791, 824, 920, 1282, 1385, 1958 |
| ScaI | AGTACT | 1 cut(s) | 689 |
| SchI | GAGTC | 1 cut(s) | 71 |
| ScrFI | CCNGG | 8 cut(s) | 264, 594, 611, 1161, 1279, 1287, 1609, 1857 |
| SduI | GDGCHC | 3 cut(s) | 342, 462, 1864 |
| SfaNI | GCATC | 7 cut(s) | 579, 590, 639, 973, 1126, 1718, 1898 |
| SfcI | CTRYAG | 1 cut(s) | 1425 |
| SinI | GGWCC | 5 cut(s) | 107, 244, 260, 791, 1282 |
| SmlI | CTYRAG | 1 cut(s) | 371 |
| SmoI | CTYRAG | 1 cut(s) | 371 |
| SsiI | CCGC | 4 cut(s) | 91, 863, 947, 1422 |
| SspMI | CTAG | 2 cut(s) | 1361, 1721 |
| SstI | GAGCTC | 1 cut(s) | 342 |
| StyD4I | CCNGG | 8 cut(s) | 262, 592, 609, 1159, 1277, 1285, 1607, 1855 |
| StyI | CCWWGG | 2 cut(s) | 902, 1924 |
| TaaI | ACNGT | 2 cut(s) | 1561, 1682 |
| TaiI | ACGT | 1 cut(s) | 359 |
| TaqI | TCGA | 5 cut(s) | 38, 336, 1211, 1675, 1976 |
| TatI | WGTACW | 2 cut(s) | 687, 1253 |
| TfiI | GAWTC | 4 cut(s) | 18, 640, 805, 1603 |
| TseFI | GTSAC | 3 cut(s) | 142, 169, 1075 |
| TseI | GCWGC | 1 cut(s) | 1424 |
| Tsp45I | GTSAC | 3 cut(s) | 142, 169, 1075 |
| TspDTI | ATGAA | 7 cut(s) | 707, 789, 836, 1326, 1383, 1557, 1811 |
| Tth111I | GACNNNGTC | 2 cut(s) | 73, 248 |
| Van91I | CCANNNNNTGG | 4 cut(s) | 538, 610, 1382, 1970 |
| VpaK11BI | GGWCC | 5 cut(s) | 107, 244, 260, 791, 1282 |
| VspI | ATTAAT | 1 cut(s) | 1464 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1923 |
| XapI | RAATTY | 2 cut(s) | 776, 884 |
| XceI | RCATGY | 3 cut(s) | 571, 821, 1631 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 750, 972 |
| XmiI | GTMKAC | 1 cut(s) | 1084 |
| XspI | CTAG | 2 cut(s) | 1361, 1721 |
| ZrmI | AGTACT | 1 cut(s) | 689 |