FvH4_5g34110

Polysaccharide lyase family 4, domain III

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
OG0014889
Physical Location & Seq
Forward (+)
24783619 .. 24789133
5515 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g34110.t2

Sequence Viewer

Length: 1917 bp
ATGTCAGGTGAAGGAGTGCGGTTGCATAATCAAGGGCGCCATGTGGTGATGGATAATGGGATAGTCCAAGTCACCTTGTCGAACCCGGATGGTATTATCACCGGAATACGTTATAATGGGATTGACAATTTGCTTGAACCTCTCAATGCCGAACATAATAGAGGGTATTGGGACCTTGTTTGGAGTGGACCTGGAGTTAAGGGAACATTTGATGTGATAAAAGGTACAGATTTTAGGGTCATTGTGGAGAATGAGGAACTGGTTGAGCTTTCGTTCATGAGAACATGGGATCCCTCCCTTGAGGGGAAATGTGTTCCCTTAAATATAGACAAAAGGTTCGTAATGCTTCGTGGTTCCTCGGGCATCTACTCCTATGCAATTTATGAGCACCTGAAGGATTGGCCTGATTTTGAAATTGGTGAAACCAGAATAACTTTCAAGCTGAGCAAAGACAAGTTTCAATACATGGCTATAGCAGACAACAGGCAAAGATGCATGCCCTTACCTGATGACCGGATGTCAGGCCGATGCCAACCCCTGGCTTTCGCGGAAGCTGTCCTACTTCTGGATCCCAAGAATAAAGAGCTGGCTGGAGAGGTAGATGACAAGTACCAGTACTCATGCATGAACAAAGACATTCAGGTTCATGGTTGGGTATGCAACGACCCACCAGTCGGGTTTTGGCAGATCACACCCAGTGATGAGTTCCGATCTGGTGGACCTTTAAAACAGAGTCTAACCTCACATGTCGGCCCCACAACTCTTGCAATATTTCTTAGTTCTCATTATGCGGGACAAGATCTGAACCCGAAATTTAGAGGTGGTGAGCCATGGAAGAAGGTTTTTGGCCCTGTTTTTATCTATCTAAATTCCGCACCAATTAGAGATGATCCATTCTTTCTATGGGAAGATGCTAAAAGACAGATGATGGCAGAAGTCCAAAGCTGGCCATATAGTTTCCCAGCTTCTGAGGATTTCCAAAAGTCCAATCAACGGGGTAATGTGAGTGGTAGACTACTTGTCTTGGACAGGTATGTTAGTGAAGACATTACACCAGCAAATGATGCTTATGTTGGTTTGGCCCCACCAGGAGATGTAGGATCATGGCAACGAGAATGCAAGGACTATCAATTCTGGACGAGGGCAGATAACAGAGGTTATTTTTCGATTAAAAACATACGTTCTGGCACTTACAATCTATATGCCTGGGTCCCTGGTTATATTGGAGATTACAGGTGTGAAGCAGTCATTAACATCAACTCAGGTTGTTTTACTGAAATGGGTGATCTTGTGCATGAACCTCCAAGAGATGGGCCTACATTGTGGGAAATAGGCATTCCTGATCGTTCCGCTGCAGAGTTTTATGTTCCTGATCCTGATCCCAAGTATATAAATAAGCTTTACGTTAATCATCCTGACAGGTTCAGACAGTACGGTCTGTGGAGCAGATATACTGAATTATATCCTGATGCAGATTTGGTTTATACTGTTGGTGTTAGTGATTATAGTAAAGATTGGTTCTTTGCTCAAGTTCCCAGGCAAAAGGACAACACACATGAAGGAACAACATGGCAAATTAAGTTCAAACTTAACATTGTCCATCGCAACGGCACCTATAAACTGCGAGTGGCAATAGCATCTGCAACTCTAGCTGAAATGCAGGTTCGAATTAACGATCCAAACTCAAGGCGTCCTCTATTTACGACTGGACTAATAGGGAGAGATAACTCAATTGCAAGACATGGGATTCATGGGATCTACCGGCTGTTCAACATCAATGTACCGGGTGTTCAGCTTGTTGAGGGTGATAATACTATCTTCCTGACACAACCAAGATGCACCAGTCCTTTCCAAGGGCTGATGTATGACTACATACGACTTGAAGGCCCCCCATCTTGTGGTTCGAGTTCATCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
CBM-like Rhamnogal_lyase fn3_3

Protein Analysis

639

Amino Acids

72.67

Weight (kDa)

5.79

Isoelectric Point (pI)

33.84

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Rhamnogal_lyase PF06045 32 - 230 5.5e-93 Rhamnogalacturonate lyase family
fn3_3 PF14686 384 - 455 1.2e-26 Polysaccharide lyase family 4, domain II
CBM-like PF14683 470 - 657 1.4e-52 Polysaccharide lyase family 4, domain III
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0014889)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G09910 AT1G09910 AT1G09910
fragaria_vesca FvH4_5g34110 FvH4_5g34110
malus_domestica MD08G1205900.v1.1
prunus_persica Prupe.1G538400_v2.0.a1 Prupe.1G538400_v2.0.a1
pyrus_communis pycom08g17810 pycom15g34900
rosa_chinensis RchiOBHm_Chr7g0233611
rosa_laevigata RLG00000001249
rosa_rugosa Rorug07G0281500 Rorug07G0281600
rosa_samantha Rh7AG438100 Rh7BG410800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 114
AasI GACNNNNNNGTC 2 cut(s) 671, 1434
Acc36I ACCTGC 1 cut(s) 1651
AccB1I GGYRCC 2 cut(s) 36, 1610
AccB7I CCANNNNNTGG 3 cut(s) 538, 1310, 1898
AccI GTMKAC 1 cut(s) 1012
AccII CGCG 1 cut(s) 548
AciI CCGC 5 cut(s) 19, 548, 791, 873, 1350
AcoI YGGCCR 1 cut(s) 947
AcsI RAATTY 2 cut(s) 812, 868
AcuI CTGAAG 1 cut(s) 413
AcyI GRCGYC 2 cut(s) 37, 1690
AdeI CACNNNGTG 1 cut(s) 698
AfaI GTAC 5 cut(s) 226, 611, 617, 1433, 1782
AfiI CCNNNNNNNGG 8 cut(s) 303, 538, 565, 674, 993, 1310, 1853, 1898
AflIII ACRYGT 1 cut(s) 745
AgsI TTSAA 7 cut(s) 137, 413, 439, 461, 1585, 1771, 1883
AhdI GACNNNNNGTC 2 cut(s) 517, 1019
AjnI CCWGG 6 cut(s) 190, 537, 1087, 1205, 1213, 1535
AloI GAACNNNNNNTCC 2 cut(s) 274, 306
AluBI AGCT 9 cut(s) 268, 442, 554, 586, 945, 965, 1399, 1652, 1795
AluI AGCT 9 cut(s) 268, 442, 554, 586, 945, 965, 1399, 1652, 1795
Alw21I GWGCWC 1 cut(s) 390
AlwNI CAGNNNCTG 1 cut(s) 968
Ama87I CYCGRG 1 cut(s) 358
AoxI GGCC 8 cut(s) 401, 523, 751, 847, 947, 1080, 1313, 1885
ApeKI GCWGC 1 cut(s) 1352
ApoI RAATTY 2 cut(s) 812, 868
ArsI GACNNNNNNTTYG 2 cut(s) 320, 352
AspLEI GCGC 1 cut(s) 39
AspS9I GGNCC 9 cut(s) 172, 188, 719, 752, 848, 1081, 1210, 1313, 1886
AsuC2I CCSGG 2 cut(s) 86, 1785
AsuHPI GGTGA 8 cut(s) 20, 58, 64, 91, 431, 836, 1295, 1817
AsuII TTCGAA 1 cut(s) 1666
AvaI CYCGRG 1 cut(s) 358
AvaII GGWCC 4 cut(s) 172, 188, 719, 1210
BalI TGGCCA 1 cut(s) 949
BamHI GGATCC 2 cut(s) 289, 568
BanI GGYRCC 2 cut(s) 36, 1610
BarI GAAGNNNNNNTAC 2 cut(s) 543, 575
BbsI GAAGAC 1 cut(s) 1050
Bbv12I GWGCWC 1 cut(s) 390
BbvI GCAGC 1 cut(s) 1339
BccI CCATC 6 cut(s) 43, 83, 922, 1304, 1608, 1900
BceAI ACGGC 1 cut(s) 1624
BciT130I CCWGG 6 cut(s) 192, 539, 1089, 1207, 1215, 1537
BcnI CCSGG 2 cut(s) 86, 1785
BfaI CTAG 1 cut(s) 1649
BfmI CTRYAG 2 cut(s) 471, 1353
BfoI RGCGCY 1 cut(s) 40
BfuAI ACCTGC 1 cut(s) 1651
BglII AGATCT 1 cut(s) 799
BisI GCNGC 1 cut(s) 1353
BlpI GCTNAGC 1 cut(s) 443
BlsI GCNGC 1 cut(s) 1354
BmcAI AGTACT 1 cut(s) 617
Bme1390I CCNGG 8 cut(s) 86, 192, 539, 1089, 1207, 1215, 1537, 1785
Bme18I GGWCC 4 cut(s) 172, 188, 719, 1210
BmeRI GACNNNNNGTC 2 cut(s) 517, 1019
BmeT110I CYCGRG 1 cut(s) 358
BmgT120I GGNCC 9 cut(s) 172, 188, 719, 752, 848, 1081, 1210, 1313, 1886
BmrFI CCNGG 8 cut(s) 86, 192, 539, 1089, 1207, 1215, 1537, 1785
BmrI ACTGGG 1 cut(s) 690
BmsI GCATC 8 cut(s) 372, 482, 518, 901, 1054, 1459, 1646, 1826
BmuI ACTGGG 1 cut(s) 690
BpiI GAAGAC 1 cut(s) 1050
BpmI CTGGAG 2 cut(s) 213, 612
Bpu1102I GCTNAGC 1 cut(s) 443
Bpu14I TTCGAA 1 cut(s) 1666
BpuEI CTTGAG 3 cut(s) 320, 1512, 1669
BpuMI CCSGG 2 cut(s) 86, 1785
BsaBI GATNNNNATC 1 cut(s) 1377
BsaHI GRCGYC 2 cut(s) 37, 1690
BsaJI CCNNGG 7 cut(s) 357, 537, 830, 1206, 1213, 1535, 1852
BsaWI WCCGGW 2 cut(s) 101, 513
Bsc4I CCNNNNNNNGG 8 cut(s) 303, 538, 565, 674, 993, 1310, 1853, 1898
Bse118I RCCGGY 1 cut(s) 1761
Bse1I ACTGG 6 cut(s) 264, 613, 671, 696, 1711, 1842
Bse8I GATNNNNATC 1 cut(s) 1377
BseBI CCWGG 6 cut(s) 192, 539, 1089, 1207, 1215, 1537
BseDI CCNNGG 7 cut(s) 357, 537, 830, 1206, 1213, 1535, 1852
BseGI GGATG 3 cut(s) 94, 522, 1411
BseJI GATNNNNATC 1 cut(s) 1377
BseLI CCNNNNNNNGG 8 cut(s) 303, 538, 565, 674, 993, 1310, 1853, 1898
BseMII CTCAG 3 cut(s) 434, 960, 1275
BseNI ACTGG 6 cut(s) 264, 613, 671, 696, 1711, 1842
BseXI GCAGC 1 cut(s) 1339
BseYI CCCAGC 1 cut(s) 961
Bsh1236I CGCG 1 cut(s) 548
BshFI GGCC 8 cut(s) 403, 525, 753, 849, 949, 1082, 1315, 1887
BshNI GGYRCC 2 cut(s) 36, 1610
BsiHKAI GWGCWC 1 cut(s) 390
BsiHKCI CYCGRG 1 cut(s) 358
BsiSI CCGG 5 cut(s) 86, 102, 514, 1762, 1784
BslFI GGGAC 3 cut(s) 185, 807, 1196
BslI CCNNNNNNNGG 8 cut(s) 303, 538, 565, 674, 993, 1310, 1853, 1898
BsmFI GGGAC 3 cut(s) 185, 807, 1196
BsmI GAATGC 2 cut(s) 1121, 1335
BsnI GGCC 8 cut(s) 403, 525, 753, 849, 949, 1082, 1315, 1887
BsoBI CYCGRG 1 cut(s) 358
Bsp119I TTCGAA 1 cut(s) 1666
Bsp1286I GDGCHC 1 cut(s) 390
Bsp1720I GCTNAGC 1 cut(s) 443
Bsp19I CCATGG 1 cut(s) 830
BspACI CCGC 5 cut(s) 19, 548, 791, 873, 1350
BspANI GGCC 8 cut(s) 403, 525, 753, 849, 949, 1082, 1315, 1887
BspCNI CTCAG 3 cut(s) 435, 961, 1274
BspFNI CGCG 1 cut(s) 548
BspHI TCATGA 1 cut(s) 276
BspMAI CTGCAG 1 cut(s) 1357
BspMI ACCTGC 1 cut(s) 1651
BspT104I TTCGAA 1 cut(s) 1666
BspT107I GGYRCC 2 cut(s) 36, 1610
BsrFI RCCGGY 1 cut(s) 1761
BsrI ACTGG 6 cut(s) 264, 613, 671, 696, 1711, 1842
BssAI RCCGGY 1 cut(s) 1761
BssECI CCNNGG 7 cut(s) 357, 537, 830, 1206, 1213, 1535, 1852
BssNI GRCGYC 2 cut(s) 37, 1690
BssT1I CCWWGG 2 cut(s) 830, 1852
Bst2UI CCWGG 6 cut(s) 192, 539, 1089, 1207, 1215, 1537
Bst4CI ACNGT 3 cut(s) 1431, 1436, 1489
BstACI GRCGYC 2 cut(s) 37, 1690
BstAPI GCANNNNNTGC 1 cut(s) 1064
BstBI TTCGAA 1 cut(s) 1666
BstC8I GCNNGC 3 cut(s) 497, 588, 947
BstDEI CTNAG 4 cut(s) 443, 776, 969, 1261
BstDSI CCRYGG 1 cut(s) 830
BstENI CCTNNNNNAGG 1 cut(s) 1851
BstF5I GGATG 3 cut(s) 94, 522, 1411
BstFNI CGCG 1 cut(s) 548
BstH2I RGCGCY 1 cut(s) 40
BstHHI GCGC 1 cut(s) 39
BstMWI GCNNNNNNNGC 2 cut(s) 1064, 1649
BstNI CCWGG 6 cut(s) 192, 539, 1089, 1207, 1215, 1537
BstNSI RCATGY 2 cut(s) 499, 749
BstSCI CCNGG 8 cut(s) 84, 190, 537, 1087, 1205, 1213, 1535, 1783
BstSFI CTRYAG 2 cut(s) 471, 1353
BstUI CGCG 1 cut(s) 548
BstV1I GCAGC 1 cut(s) 1339
BstV2I GAAGAC 1 cut(s) 1050
BstX2I RGATCY 4 cut(s) 289, 568, 799, 1755
BstYI RGATCY 4 cut(s) 289, 568, 799, 1755
BsuRI GGCC 8 cut(s) 403, 525, 753, 849, 949, 1082, 1315, 1887
BtgI CCRYGG 1 cut(s) 830
BtgZI GCGATG 1 cut(s) 1586
BtsCI GGATG 3 cut(s) 94, 522, 1411
BtsIMutI CAGTG 1 cut(s) 703
BveI ACCTGC 1 cut(s) 1651
Cac8I GCNNGC 3 cut(s) 497, 588, 947
CaiI CAGNNNCTG 1 cut(s) 968
CciI TCATGA 1 cut(s) 276
CfoI GCGC 1 cut(s) 39
Cfr10I RCCGGY 1 cut(s) 1761
Cfr13I GGNCC 9 cut(s) 172, 188, 719, 752, 848, 1081, 1210, 1313, 1886
CseI GACGC 1 cut(s) 1679
Csp6I GTAC 5 cut(s) 225, 610, 616, 1432, 1781
CspCI CAANNNNNGTGG 2 cut(s) 745, 780
CviQI GTAC 5 cut(s) 225, 610, 616, 1432, 1781
DdeI CTNAG 4 cut(s) 443, 776, 969, 1261
DinI GGCGCC 1 cut(s) 38
DraI TTTAAA 1 cut(s) 726
DraIII CACNNNGTG 1 cut(s) 698
DrdI GACNNNNNNGTC 2 cut(s) 671, 1434
DriI GACNNNNNGTC 2 cut(s) 517, 1019
DseDI GACNNNNNNGTC 2 cut(s) 671, 1434
EaeI YGGCCR 1 cut(s) 947
Eam1105I GACNNNNNGTC 2 cut(s) 517, 1019
Eco130I CCWWGG 2 cut(s) 830, 1852
Eco47I GGWCC 4 cut(s) 172, 188, 719, 1210
Eco57I CTGAAG 1 cut(s) 413
Eco88I CYCGRG 1 cut(s) 358
EcoNI CCTNNNNNAGG 1 cut(s) 1851
EcoO109I RGGNCCY 3 cut(s) 172, 1210, 1886
EcoRII CCWGG 6 cut(s) 190, 537, 1087, 1205, 1213, 1535
EcoT14I CCWWGG 2 cut(s) 830, 1852
EcoT22I ATGCAT 2 cut(s) 497, 626
EgeI GGCGCC 1 cut(s) 38
EheI GGCGCC 1 cut(s) 38
ErhI CCWWGG 2 cut(s) 830, 1852
FaqI GGGAC 3 cut(s) 185, 807, 1196
FauI CCCGC 1 cut(s) 784
FblI GTMKAC 1 cut(s) 1012
Fnu4HI GCNGC 1 cut(s) 1353
FokI GGATG 3 cut(s) 101, 529, 1398
Fsp4HI GCNGC 1 cut(s) 1353
FspBI CTAG 1 cut(s) 1649
GlaI GCGC 1 cut(s) 38
GluI GCNGC 1 cut(s) 1353
GsaI CCCAGC 1 cut(s) 965
GsuI CTGGAG 2 cut(s) 213, 612
HaeII RGCGCY 1 cut(s) 40
HaeIII GGCC 8 cut(s) 403, 525, 753, 849, 949, 1082, 1315, 1887
HapII CCGG 5 cut(s) 86, 102, 514, 1762, 1784
HgaI GACGC 1 cut(s) 1679
HhaI GCGC 1 cut(s) 39
Hin1I GRCGYC 2 cut(s) 37, 1690
Hin6I GCGC 1 cut(s) 37
HinP1I GCGC 1 cut(s) 37
HindIII AAGCTT 1 cut(s) 1397
HinfI GANTC 2 cut(s) 733, 1747
HpaII CCGG 5 cut(s) 86, 102, 514, 1762, 1784
HphI GGTGA 8 cut(s) 20, 58, 64, 91, 431, 836, 1295, 1817
Hpy166II GTNNAC 3 cut(s) 188, 719, 1013
Hpy188I TCNGA 4 cut(s) 710, 804, 970, 1427
Hpy188III TCNNGA 9 cut(s) 277, 566, 1135, 1340, 1370, 1376, 1415, 1466, 1822
Hpy8I GTNNAC 3 cut(s) 188, 719, 1013
HpyAV CCTTC 5 cut(s) 5, 388, 832, 1553, 1877
HpyCH4III ACNGT 3 cut(s) 1431, 1436, 1489
HpyCH4IV ACGT 3 cut(s) 109, 1180, 1404
HpyF10VI GCNNNNNNNGC 2 cut(s) 1064, 1649
HpyF3I CTNAG 4 cut(s) 443, 776, 969, 1261
HpySE526I ACGT 3 cut(s) 109, 1180, 1404
Hsp92I GRCGYC 2 cut(s) 37, 1690
HspAI GCGC 1 cut(s) 37
KasI GGCGCC 1 cut(s) 36
KflI GGGWCCC 1 cut(s) 1210
LmnI GCTCC 1 cut(s) 1443
Lsp1109I GCAGC 1 cut(s) 1339
LweI GCATC 8 cut(s) 372, 482, 518, 901, 1054, 1459, 1646, 1826
MaeI CTAG 1 cut(s) 1649
MaeII ACGT 3 cut(s) 109, 1180, 1404
MaeIII GTNAC 1 cut(s) 70
MboII GAAGA 4 cut(s) 847, 920, 1055, 1810
MfeI CAATTG 1 cut(s) 1731
MflI RGATCY 4 cut(s) 289, 568, 799, 1755
MhlI GDGCHC 1 cut(s) 390
MlsI TGGCCA 1 cut(s) 949
MluNI TGGCCA 1 cut(s) 949
Mly113I GGCGCC 1 cut(s) 37
MlyI GAGTC 1 cut(s) 742
Mox20I TGGCCA 1 cut(s) 949
Mph1103I ATGCAT 2 cut(s) 497, 626
MscI TGGCCA 1 cut(s) 949
Msp20I TGGCCA 1 cut(s) 949
MspA1I CMGCKG 1 cut(s) 1352
MspI CCGG 5 cut(s) 86, 102, 514, 1762, 1784
MspR9I CCNGG 8 cut(s) 86, 192, 539, 1089, 1207, 1215, 1537, 1785
MunI CAATTG 1 cut(s) 1731
Mva1269I GAATGC 2 cut(s) 1121, 1335
MvaI CCWGG 6 cut(s) 192, 539, 1089, 1207, 1215, 1537
MvnI CGCG 1 cut(s) 548
MwoI GCNNNNNNNGC 2 cut(s) 1064, 1649
NarI GGCGCC 1 cut(s) 37
NciI CCSGG 2 cut(s) 86, 1785
NcoI CCATGG 1 cut(s) 830
NmuCI GTSAC 1 cut(s) 70
NsiI ATGCAT 2 cut(s) 497, 626
NspI RCATGY 2 cut(s) 499, 749
NspV TTCGAA 1 cut(s) 1666
PaeI GCATGC 1 cut(s) 499
PagI TCATGA 1 cut(s) 276
PciI ACATGT 1 cut(s) 745
PctI GAATGC 2 cut(s) 1121, 1335
PfeI GAWTC 1 cut(s) 1747
PflMI CCANNNNNTGG 3 cut(s) 538, 1310, 1898
PkrI GCNGC 1 cut(s) 1354
PleI GAGTC 1 cut(s) 741
PluTI GGCGCC 1 cut(s) 40
PpsI GAGTC 1 cut(s) 741
PpuMI RGGWCCY 2 cut(s) 172, 1210
PscI ACATGT 1 cut(s) 745
PsiI TTATAA 1 cut(s) 114
Psp5II RGGWCCY 2 cut(s) 172, 1210
Psp6I CCWGG 6 cut(s) 190, 537, 1087, 1205, 1213, 1535
PspFI CCCAGC 1 cut(s) 961
PspGI CCWGG 6 cut(s) 190, 537, 1087, 1205, 1213, 1535
PspPI GGNCC 9 cut(s) 172, 188, 719, 752, 848, 1081, 1210, 1313, 1886
PspPPI RGGWCCY 2 cut(s) 172, 1210
PsrI GAACNNNNNNTAC 2 cut(s) 1773, 1805
PstI CTGCAG 1 cut(s) 1357
PstNI CAGNNNCTG 1 cut(s) 968
PsuI RGATCY 4 cut(s) 289, 568, 799, 1755
RsaI GTAC 5 cut(s) 226, 611, 617, 1433, 1782
RsaNI GTAC 5 cut(s) 225, 610, 616, 1432, 1781
SatI GCNGC 1 cut(s) 1353
Sau96I GGNCC 9 cut(s) 172, 188, 719, 752, 848, 1081, 1210, 1313, 1886
ScaI AGTACT 1 cut(s) 617
SchI GAGTC 1 cut(s) 742
ScrFI CCNGG 8 cut(s) 86, 192, 539, 1089, 1207, 1215, 1537, 1785
SduI GDGCHC 1 cut(s) 390
SfaNI GCATC 8 cut(s) 372, 482, 518, 901, 1054, 1459, 1646, 1826
SfcI CTRYAG 2 cut(s) 471, 1353
SfoI GGCGCC 1 cut(s) 38
SfuI TTCGAA 1 cut(s) 1666
SinI GGWCC 4 cut(s) 172, 188, 719, 1210
SmlI CTYRAG 3 cut(s) 299, 1527, 1684
SmoI CTYRAG 3 cut(s) 299, 1527, 1684
SphI GCATGC 1 cut(s) 499
SsiI CCGC 5 cut(s) 19, 548, 791, 873, 1350
SspDI GGCGCC 1 cut(s) 36
SspI AATATT 1 cut(s) 771
SspMI CTAG 1 cut(s) 1649
StyD4I CCNGG 8 cut(s) 84, 190, 537, 1087, 1205, 1213, 1535, 1783
StyI CCWWGG 2 cut(s) 830, 1852
TaaI ACNGT 3 cut(s) 1431, 1436, 1489
TaiI ACGT 3 cut(s) 112, 1183, 1407
TaqI TCGA 4 cut(s) 80, 1166, 1666, 1904
TatI WGTACW 1 cut(s) 615
TfiI GAWTC 1 cut(s) 1747
TscAI CASTG 1 cut(s) 703
TseFI GTSAC 1 cut(s) 70
TseI GCWGC 1 cut(s) 1352
Tsp45I GTSAC 1 cut(s) 70
TspDTI ATGAA 7 cut(s) 265, 635, 641, 1311, 1572, 1739, 1899
TspRI CASTG 1 cut(s) 703
Van91I CCANNNNNTGG 3 cut(s) 538, 1310, 1898
VpaK11BI GGWCC 4 cut(s) 172, 188, 719, 1210
XagI CCTNNNNNAGG 1 cut(s) 1851
XapI RAATTY 2 cut(s) 812, 868
XceI RCATGY 2 cut(s) 499, 749
XcmI CCANNNNNNNNNTGG 2 cut(s) 678, 900
XmiI GTMKAC 1 cut(s) 1012
XspI CTAG 1 cut(s) 1649
ZrmI AGTACT 1 cut(s) 617
Zsp2I ATGCAT 2 cut(s) 497, 626
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.