AT1G13150

cytochrome P450

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
Physical Location & Seq
Reverse (-)
4481875 .. 4483751
1877 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G13150.1

Sequence Viewer

Length: 1590 bp
ATGTCTTTAACAGAGCGACTTTATAATCATCTTTCTCTCTTCGATCTACTTCTTTCCTTGTTGGGGCTCTTTGTTTTCTGCTGTTTGCGTGAGAAGTTAACCAACAAGCGTGGACCAATGCTATGGCCAGTTTTCGGAATTACTTTAGAGTTTTTCTTTCATATAAATGATGTCTATGGATGGGTCACAAGGAGTTTGAAAAAATGTCGAGGTACCTTTCTTTATCGGGGAGTTTGGCTTGATGGGTCTTATGGAGCTGTGACTTGTGTTCCTGCAAATGTCGAGTACATGCTCAAGACTAACTTCAAGAACTTCCCAAAAGGTACCTTCTTTAAAAGCCGGTTCAATGATCTGCTCGAGGAAGGTATCTTTAATGCTGATGATGATTCTTGGAAGGAGCAACGACGGATCATCATAACCGAAATGCATTCAACCGGGTTTGTAGAGCATTCCTTTCAGACAACACAACATTTGGTAAGGAAGAAGCTGTTGAAGGTGATGGAGAGTTTCGCAAAGTCACAAGAAGCTTTCGATCTCCAAGACGTGTTCCTGCGCTTGACGTTTGACATCATCTGCCTTGCGGGTCTAGGTGCTGACCCGGAAACTCTAGCTGTTGATCTTCCCCAAGTTCCATTTGCTAAAGCTTTTGAAGAAGCAACAGAGTCTACACTGTTTAGATTCATGATCCCTCCATTTATATGGAAGCCCATGAGGTTCCTCGACACAGGATATGAAAAAGGTCTCAGGATAGCTGTTGGGGTCGTGCACGGGTTCGTCGACAAGATGATTGTGGATCGTATCTGCGAGCTCAAGGAAGAAGAAACGTTAGACAATAGATCTGATGTTCTCTCAAGGATTATTCAGATAGAGAGTCATAAAAGGGAAAATGAGATTGATCCTTCCACCATTAGATTTTTCAGACAATTTTGCACAAGTTTTATATTAGCTGGACGAGATACAAGTTCTGTTGCACTTTCATGGTTCTGCTGGGTGATACAGAAACACCCAGAGGTTGAAAACAAAATCATCTGCGAGATAAGAGAAATCTTGAGACAGCGAGGGGATTCTCCAACCAGCAAAAACGAGAGCCTCTTCACAGTCAAAGAACTAAACAACATGGTATACCTACAAGCAGCACTATCAGAAACTCTGAGACTGTTCCCTCCAATTCCAATGGAAATGAAACAAGCCATTGAAGATGATGTGTTACCAGATGGGACATTCGTAAGAAAAGGTTCACGGGTTTACTTCTCAATCTATGCCATGGGAAGGATGGAATCAATCTGGGGAAAAGATTGTGAAATTTTCAGACCAGAGAGATGGATCCAAGCAGGGAAGTTTGTCAGTGACGACCAGTTCAAATACGTTGTATTCAATGCTGGACCAAGGCTGTGCATAGGAAAAACATTTGCTTACCTGCAGATGAAGATGATAGCTGCTTCAGTTTTGTTGAGGTACTCAATCAAGGTTGTCCAAGATCATGTCATAGCCCCGAGAGTCACAACTAACTTGTACATGAAGTACGGCCTCAAAGTAACCATCACACCAAGGTCGCTGGAAGAGAAGAAACTTGAGTCATGTTCCATGTAG

Protein Analysis

529

Amino Acids

61.33

Weight (kDa)

8.32

Isoelectric Point (pI)

41.12

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 38 - 499 1.8e-63 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0013182)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G13140 AT1G13140 AT1G13150 AT1G24540 AT3G26125
fragaria_vesca FvH4_4g25350
malus_domestica MD13G1104800.v1.1
prunus_persica Prupe.1G241700_v2.0.a1
pyrus_communis pycom13g09100
rosa_chinensis RchiOBHm_Chr4g0432631
rosa_laevigata RLG00000006828
rosa_multiflora Rmu_sc0004612.1_g000006
rosa_roxburghii Rroxscaffold_5G00374100
rosa_rugosa Rorug04G0260900.1
rosa_samantha Rh4BG323500 Rh4CG338600 Rh4DG319100
rosa_wichuraiana Rw4G027440

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 24
Acc36I ACCTGC 1 cut(s) 1425
Acc65I GGTACC 2 cut(s) 212, 323
AccB1I GGYRCC 2 cut(s) 212, 323
AccI GTMKAC 3 cut(s) 665, 777, 1122
AciI CCGC 1 cut(s) 581
AclI AACGTT 1 cut(s) 824
AclWI GGATC 6 cut(s) 416, 679, 801, 890, 1318, 1331
AcoI YGGCCR 1 cut(s) 125
AcsI RAATTY 1 cut(s) 1302
AcuI CTGAAG 1 cut(s) 1425
AfaI GTAC 6 cut(s) 214, 287, 325, 1457, 1514, 1523
AfiI CCNNNNNNNGG 3 cut(s) 63, 134, 1269
AflIII ACRYGT 1 cut(s) 543
AjiI CACGTC 1 cut(s) 544
AluBI AGCT 9 cut(s) 257, 487, 527, 611, 644, 752, 808, 947, 1436
AluI AGCT 9 cut(s) 257, 487, 527, 611, 644, 752, 808, 947, 1436
Alw21I GWGCWC 2 cut(s) 768, 810
Alw26I GTCTC 3 cut(s) 746, 1045, 1147
Alw44I GTGCAC 1 cut(s) 764
AlwI GGATC 6 cut(s) 416, 679, 801, 890, 1318, 1331
Ama87I CYCGRG 2 cut(s) 356, 1492
AoxI GGCC 2 cut(s) 125, 1525
ApaLI GTGCAC 1 cut(s) 764
ApeKI GCWGC 2 cut(s) 1133, 1436
ApoI RAATTY 1 cut(s) 1302
Asp700I GAANNNNTTC 1 cut(s) 1234
Asp718I GGTACC 2 cut(s) 212, 323
AspLEI GCGC 1 cut(s) 555
AspS9I GGNCC 2 cut(s) 113, 1382
AsuC2I CCSGG 2 cut(s) 436, 599
AsuHPI GGTGA 2 cut(s) 508, 1003
AvaI CYCGRG 2 cut(s) 356, 1492
AvaII GGWCC 2 cut(s) 113, 1382
BaeGI GKGCMC 1 cut(s) 768
BalI TGGCCA 1 cut(s) 127
BamHI GGATCC 1 cut(s) 1323
BanI GGYRCC 2 cut(s) 212, 323
BanII GRGCYC 2 cut(s) 69, 810
Bbv12I GWGCWC 2 cut(s) 768, 810
BbvI GCAGC 2 cut(s) 1145, 1423
BccI CCATC 7 cut(s) 174, 236, 493, 1208, 1267, 1314, 1547
BceAI ACGGC 1 cut(s) 1540
BcnI CCSGG 2 cut(s) 436, 599
BcoDI GTCTC 3 cut(s) 746, 1045, 1147
BfaI CTAG 2 cut(s) 587, 608
BfmI CTRYAG 1 cut(s) 1418
BfuAI ACCTGC 1 cut(s) 1425
BglII AGATCT 1 cut(s) 836
BisI GCNGC 2 cut(s) 1134, 1437
BlsI GCNGC 2 cut(s) 1135, 1438
Bme1390I CCNGG 2 cut(s) 436, 599
Bme18I GGWCC 2 cut(s) 113, 1382
BmeT110I CYCGRG 2 cut(s) 356, 1492
BmgBI CACGTC 1 cut(s) 544
BmgT120I GGNCC 2 cut(s) 113, 1382
BmiI GGNNCC 4 cut(s) 214, 325, 716, 1325
BmrFI CCNGG 2 cut(s) 436, 599
BpuEI CTTGAG 4 cut(s) 278, 794, 835, 1069
BpuMI CCSGG 2 cut(s) 436, 599
BsaI GGTCTC 1 cut(s) 746
BsaJI CCNNGG 3 cut(s) 1263, 1385, 1547
Bsc4I CCNNNNNNNGG 3 cut(s) 63, 134, 1269
Bse118I RCCGGY 1 cut(s) 339
Bse1I ACTGG 2 cut(s) 128, 1354
BseDI CCNNGG 3 cut(s) 1263, 1385, 1547
BseGI GGATG 2 cut(s) 185, 1278
BseLI CCNNNNNNNGG 3 cut(s) 63, 134, 1269
BseMII CTCAG 2 cut(s) 757, 1142
BseNI ACTGG 2 cut(s) 128, 1354
BseSI GKGCMC 1 cut(s) 768
BseXI GCAGC 2 cut(s) 1145, 1423
BseYI CCCAGC 1 cut(s) 987
BshFI GGCC 2 cut(s) 127, 1527
BshNI GGYRCC 2 cut(s) 212, 323
BsiHKAI GWGCWC 2 cut(s) 768, 810
BsiHKCI CYCGRG 2 cut(s) 356, 1492
BsiSI CCGG 3 cut(s) 340, 435, 599
BslFI GGGAC 1 cut(s) 1231
BslI CCNNNNNNNGG 3 cut(s) 63, 134, 1269
BsmAI GTCTC 3 cut(s) 746, 1045, 1147
BsmFI GGGAC 1 cut(s) 1231
BsmI GAATGC 2 cut(s) 427, 448
BsnI GGCC 2 cut(s) 127, 1527
Bso31I GGTCTC 1 cut(s) 746
BsoBI CYCGRG 2 cut(s) 356, 1492
Bsp1286I GDGCHC 3 cut(s) 69, 768, 810
Bsp1407I TGTACA 1 cut(s) 1512
Bsp19I CCATGG 1 cut(s) 1263
BspACI CCGC 1 cut(s) 581
BspANI GGCC 2 cut(s) 127, 1527
BspCNI CTCAG 2 cut(s) 756, 1143
BspHI TCATGA 1 cut(s) 681
BspLI GGNNCC 4 cut(s) 214, 325, 716, 1325
BspMAI CTGCAG 1 cut(s) 1422
BspMI ACCTGC 1 cut(s) 1425
BspPI GGATC 6 cut(s) 416, 679, 801, 890, 1318, 1331
BspT107I GGYRCC 2 cut(s) 212, 323
BspTNI GGTCTC 1 cut(s) 746
BsrFI RCCGGY 1 cut(s) 339
BsrGI TGTACA 1 cut(s) 1512
BsrI ACTGG 2 cut(s) 128, 1354
BssAI RCCGGY 1 cut(s) 339
BssECI CCNNGG 3 cut(s) 1263, 1385, 1547
BssNAI GTATAC 1 cut(s) 1123
BssT1I CCWWGG 3 cut(s) 1263, 1385, 1547
Bst1107I GTATAC 1 cut(s) 1123
Bst4CI ACNGT 3 cut(s) 672, 1099, 1158
Bst6I CTCTTC 3 cut(s) 44, 1097, 1554
BstAUI TGTACA 1 cut(s) 1512
BstC8I GCNNGC 1 cut(s) 806
BstDEI CTNAG 2 cut(s) 743, 1151
BstDSI CCRYGG 1 cut(s) 1263
BstF5I GGATG 2 cut(s) 185, 1278
BstHHI GCGC 1 cut(s) 555
BstMAI GTCTC 3 cut(s) 746, 1045, 1147
BstNSI RCATGY 1 cut(s) 292
BstSCI CCNGG 2 cut(s) 434, 597
BstSFI CTRYAG 1 cut(s) 1418
BstSLI GKGCMC 1 cut(s) 768
BstV1I GCAGC 2 cut(s) 1145, 1423
BstX2I RGATCY 2 cut(s) 836, 1323
BstXI CCANNNNNNTGG 3 cut(s) 123, 699, 1320
BstYI RGATCY 2 cut(s) 836, 1323
BstZ17I GTATAC 1 cut(s) 1123
BsuRI GGCC 2 cut(s) 127, 1527
BtgI CCRYGG 1 cut(s) 1263
BtrI CACGTC 1 cut(s) 544
BtsCI GGATG 2 cut(s) 185, 1278
BtsIMutI CAGTG 2 cut(s) 668, 1351
BveI ACCTGC 1 cut(s) 1425
Cac8I GCNNGC 1 cut(s) 806
CciI TCATGA 1 cut(s) 681
CfoI GCGC 1 cut(s) 555
Cfr10I RCCGGY 1 cut(s) 339
Cfr13I GGNCC 2 cut(s) 113, 1382
Csp6I GTAC 6 cut(s) 213, 286, 324, 1456, 1513, 1522
CspCI CAANNNNNGTGG 2 cut(s) 91, 126
CviQI GTAC 6 cut(s) 213, 286, 324, 1456, 1513, 1522
DdeI CTNAG 2 cut(s) 743, 1151
DraI TTTAAA 1 cut(s) 334
EaeI YGGCCR 1 cut(s) 125
Eam1104I CTCTTC 3 cut(s) 44, 1097, 1554
EarI CTCTTC 3 cut(s) 44, 1097, 1554
Ecl136II GAGCTC 1 cut(s) 808
Eco130I CCWWGG 3 cut(s) 1263, 1385, 1547
Eco24I GRGCYC 2 cut(s) 69, 810
Eco31I GGTCTC 1 cut(s) 746
Eco47I GGWCC 2 cut(s) 113, 1382
Eco53kI GAGCTC 1 cut(s) 808
Eco57I CTGAAG 1 cut(s) 1425
Eco88I CYCGRG 2 cut(s) 356, 1492
EcoICRI GAGCTC 1 cut(s) 808
EcoT14I CCWWGG 3 cut(s) 1263, 1385, 1547
EcoT22I ATGCAT 1 cut(s) 429
EcoT38I GRGCYC 2 cut(s) 69, 810
ErhI CCWWGG 3 cut(s) 1263, 1385, 1547
FalI AAGNNNNNCTT 2 cut(s) 287, 319
FaqI GGGAC 1 cut(s) 1231
FauI CCCGC 1 cut(s) 574
FblI GTMKAC 3 cut(s) 665, 777, 1122
Fnu4HI GCNGC 2 cut(s) 1134, 1437
FokI GGATG 2 cut(s) 192, 1285
FriOI GRGCYC 2 cut(s) 69, 810
Fsp4HI GCNGC 2 cut(s) 1134, 1437
FspBI CTAG 2 cut(s) 587, 608
GlaI GCGC 1 cut(s) 554
GluI GCNGC 2 cut(s) 1134, 1437
GsaI CCCAGC 1 cut(s) 991
HaeIII GGCC 2 cut(s) 127, 1527
HapII CCGG 3 cut(s) 340, 435, 599
HhaI GCGC 1 cut(s) 555
Hin6I GCGC 1 cut(s) 553
HinP1I GCGC 1 cut(s) 553
HincII GTYRAC 2 cut(s) 99, 778
HindII GTYRAC 2 cut(s) 99, 778
HindIII AAGCTT 2 cut(s) 525, 642
HinfI GANTC 8 cut(s) 386, 662, 678, 871, 1064, 1277, 1497, 1574
HpaI GTTAAC 1 cut(s) 99
HpaII CCGG 3 cut(s) 340, 435, 599
HphI GGTGA 2 cut(s) 508, 1003
Hpy166II GTNNAC 8 cut(s) 99, 113, 666, 766, 778, 1123, 1238, 1246
Hpy188I TCNGA 8 cut(s) 137, 459, 841, 864, 920, 1144, 1152, 1310
Hpy188III TCNNGA 5 cut(s) 295, 307, 682, 745, 1048
Hpy8I GTNNAC 8 cut(s) 99, 113, 666, 766, 778, 1123, 1238, 1246
Hpy99I CGWCG 2 cut(s) 408, 779
HpyAV CCTTC 6 cut(s) 337, 356, 388, 487, 909, 1263
HpyCH4III ACNGT 3 cut(s) 672, 1099, 1158
HpyCH4IV ACGT 4 cut(s) 543, 560, 824, 1365
HpyCH4V TGCA 7 cut(s) 275, 427, 766, 930, 971, 1395, 1420
HpyF3I CTNAG 2 cut(s) 743, 1151
HpySE526I ACGT 4 cut(s) 543, 560, 824, 1365
HspAI GCGC 1 cut(s) 553
KpnI GGTACC 2 cut(s) 216, 327
KspAI GTTAAC 1 cut(s) 99
LmnI GCTCC 2 cut(s) 254, 397
Lsp1109I GCAGC 2 cut(s) 1145, 1423
MaeI CTAG 2 cut(s) 587, 608
MaeII ACGT 4 cut(s) 543, 560, 824, 1365
MaeIII GTNAC 7 cut(s) 184, 259, 516, 1206, 1346, 1498, 1534
MflI RGATCY 2 cut(s) 836, 1323
MhlI GDGCHC 3 cut(s) 69, 768, 810
MlsI TGGCCA 1 cut(s) 127
MluCI AATT 4 cut(s) 138, 923, 1167, 1302
MluNI TGGCCA 1 cut(s) 127
MlyI GAGTC 4 cut(s) 671, 880, 1506, 1583
MmeI TCCRAC 1 cut(s) 1094
Mox20I TGGCCA 1 cut(s) 127
Mph1103I ATGCAT 1 cut(s) 429
MroXI GAANNNNTTC 1 cut(s) 1234
MscI TGGCCA 1 cut(s) 127
MseI TTAA 4 cut(s) 8, 98, 333, 372
MslI CAYNNNNRTG 3 cut(s) 165, 697, 976
Msp20I TGGCCA 1 cut(s) 127
MspI CCGG 3 cut(s) 340, 435, 599
MspR9I CCNGG 2 cut(s) 436, 599
Mva1269I GAATGC 2 cut(s) 427, 448
NciI CCSGG 2 cut(s) 436, 599
NcoI CCATGG 1 cut(s) 1263
NlaIV GGNNCC 4 cut(s) 214, 325, 716, 1325
NmuCI GTSAC 5 cut(s) 184, 259, 516, 1346, 1498
NsiI ATGCAT 1 cut(s) 429
NspI RCATGY 1 cut(s) 292
PaeR7I CTCGAG 1 cut(s) 356
PagI TCATGA 1 cut(s) 681
PcsI WCGNNNNNNNCGW 1 cut(s) 774
PctI GAATGC 2 cut(s) 427, 448
PdmI GAANNNNTTC 1 cut(s) 1234
PfeI GAWTC 4 cut(s) 386, 678, 1064, 1277
PkrI GCNGC 2 cut(s) 1135, 1438
PleI GAGTC 4 cut(s) 670, 879, 1505, 1582
PpsI GAGTC 4 cut(s) 670, 879, 1505, 1582
PsiI TTATAA 1 cut(s) 24
Psp124BI GAGCTC 1 cut(s) 810
Psp1406I AACGTT 1 cut(s) 824
PspFI CCCAGC 1 cut(s) 987
PspN4I GGNNCC 4 cut(s) 214, 325, 716, 1325
PspPI GGNCC 2 cut(s) 113, 1382
PspXI VCTCGAGB 1 cut(s) 356
PstI CTGCAG 1 cut(s) 1422
PsuI RGATCY 2 cut(s) 836, 1323
RsaI GTAC 6 cut(s) 214, 287, 325, 1457, 1514, 1523
RsaNI GTAC 6 cut(s) 213, 286, 324, 1456, 1513, 1522
RseI CAYNNNNRTG 3 cut(s) 165, 697, 976
SacI GAGCTC 1 cut(s) 810
SalI GTCGAC 1 cut(s) 776
SaqAI TTAA 4 cut(s) 8, 98, 333, 372
SatI GCNGC 2 cut(s) 1134, 1437
Sau96I GGNCC 2 cut(s) 113, 1382
SchI GAGTC 4 cut(s) 671, 880, 1506, 1583
ScrFI CCNGG 2 cut(s) 436, 599
SduI GDGCHC 3 cut(s) 69, 768, 810
SfcI CTRYAG 1 cut(s) 1418
Sfr274I CTCGAG 1 cut(s) 356
SinI GGWCC 2 cut(s) 113, 1382
SlaI CTCGAG 1 cut(s) 356
SmiMI CAYNNNNRTG 3 cut(s) 165, 697, 976
SmlI CTYRAG 6 cut(s) 293, 356, 809, 850, 1048, 1571
SmoI CTYRAG 6 cut(s) 293, 356, 809, 850, 1048, 1571
Sse9I AATT 4 cut(s) 138, 923, 1167, 1302
SsiI CCGC 1 cut(s) 581
SspMI CTAG 2 cut(s) 587, 608
SstI GAGCTC 1 cut(s) 810
StyD4I CCNGG 2 cut(s) 434, 597
StyI CCWWGG 3 cut(s) 1263, 1385, 1547
TaaI ACNGT 3 cut(s) 672, 1099, 1158
TaiI ACGT 4 cut(s) 546, 563, 827, 1368
TaqI TCGA 7 cut(s) 42, 208, 282, 357, 531, 720, 777
TasI AATT 4 cut(s) 138, 923, 1167, 1302
TatI WGTACW 2 cut(s) 285, 1512
TfiI GAWTC 4 cut(s) 386, 678, 1064, 1277
Tru1I TTAA 4 cut(s) 8, 98, 333, 372
Tru9I TTAA 4 cut(s) 8, 98, 333, 372
TscAI CASTG 2 cut(s) 675, 1351
TseFI GTSAC 5 cut(s) 184, 259, 516, 1346, 1498
TseI GCWGC 2 cut(s) 1133, 1436
Tsp45I GTSAC 5 cut(s) 184, 259, 516, 1346, 1498
TspDTI ATGAA 7 cut(s) 149, 670, 747, 966, 1196, 1439, 1532
TspGWI ACGGA 1 cut(s) 421
TspRI CASTG 2 cut(s) 675, 1351
VneI GTGCAC 1 cut(s) 764
VpaK11BI GGWCC 2 cut(s) 113, 1382
XapI RAATTY 1 cut(s) 1302
XceI RCATGY 1 cut(s) 292
XcmI CCANNNNNNNNNTGG 1 cut(s) 1270
XhoI CTCGAG 1 cut(s) 356
XmiI GTMKAC 3 cut(s) 665, 777, 1122
XmnI GAANNNNTTC 1 cut(s) 1234
XspI CTAG 2 cut(s) 587, 608
Zsp2I ATGCAT 1 cut(s) 429
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.