FvH4_4g25350

Cytochrome p450

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb4
Physical Location & Seq
Forward (+)
27163922 .. 27165478
1557 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_4g25350.t1

Sequence Viewer

Length: 1557 bp
ATGGGTTTTTCAGTGATTCTGAACTGGCTACATTTCTGGGATGTAGCAGCTGCCTTGATGGGCCTGTTCATATTTAGTTGCTTGCTTCAGAGGTTCACCAACAAAAATGGTCCAATGTTATGGCCAGTTTTGGGGATTGCACCCTCCTTGTTTATAAATGCACACACTATCTATGATTGGGCTACCATGGCTCTGATCAAAGCAGGGGGAACATTCCCCTACAGAGGAGTGTGGTTTGGAGGATCCCATGGGATCATTACACTTGATCCTTCAAACATTGAGTACATGCTCAAAACAAGGTTCAAGAACTTCCCAAAAGGCAAGTATTACAGGGAGAGGTTTCATGATTTTCTTGGGGATGGAATTTTCAATGCAGACAATGATCTGTGGAAGGAGCAGAGAAGGTTGGCAACTTCGGAGATGCATTCGGGTCGTTTCATGGAGCATTCGTATGCGTCCATGCAAGAGTTGGTGCACAAGAAGTTGTTGAGGTTGATGGAGAAAGTGGTGGTATCAGGGAGTAGCATTGATCTTCAAGAAGTGCTTCTTCGGTTTACTTTTGACAACATTTGCTCTGTAGCTCTTGGTGTTGATTCAGGGTGCTTGGACCTTGATTTGCCTCAGATTCCGTTTGTGAAAGCCTTTGAAGAAGCTACTGAGCTCACTATGTTCAGATTCATGGTGCCACCTTTTGTGTGGAAGCCAATGAAGTTGTTTGGAATTGGATTCGAGAAGAGGCTCAAGGAAGCAACTAAAATAGTGCATTGTTTTGCTGAAAGTACAGTGAAGGATCGAAGGGAAGAGTTGATGAAGCTCGGTAGCTTAGAAGATCGTTCTGATCTCTTGTCAAGGCTTATGGACAATGAAAAGCAGCACTTTTCGGATAAGTTTCTAAGCGATTTCTGCATAAGTTTCATTTTGGCTGGAAGGGACACAAGCTCTGTAGGATTGGCATGGTTCTTTTGGTTGGTACAAAAACATCCTGAGGTGGAAAAGAAAATCCTCAAAGAAATCAATGAAATTTTAGGCCAGCGCCAATGTAACAAAAAAGAATTACCAGATGGTGATACAGTTTTTACAGTGGAAGAACTGAAGAAGATGGTCTATTTACAAGCAGTGTTGTCTGAGACTTTAAGGCTTTACCCACCAGTGCCAATTGACATCAAAGAGGTTGTAGAAGATGATGTGTTTCCTGATGGTAATATCGTCAAAAAGGGGGCTCGAGTTCTCTACTGCATTTACTCCATGGCTCGAATGGAGTCAATTTGGGGACAGAACTGCTTGGATTTCAAGCCTGAAAGATGGATTAACAATGATGGTGAGCTTCTCAGTGAGAATCAATTCAAATATGCTGTCTTTAATGGGGGTCCAAGGTTTTGTTTGGGGAAGAAGTTTGCTTATTTGCAAATGAAAACGGTGGCTGCAGCCACTCTGCTCAGGTATGAAGTTAAGGTTGTTGAAGGTCAAAGTGTTGTTCCAAAGATGACAACCACACTTTACATGCAGAATGGGTTGCTGGTGAGTCTTAAGCCTAGGTTGGTGACTACTATTGTGTAA

Protein Analysis

519

Amino Acids

59.54

Weight (kDa)

8.21

Isoelectric Point (pI)

38.81

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 73 - 498 5.2e-78 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0013182)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G13140 AT1G13140 AT1G13150 AT1G24540 AT3G26125
fragaria_vesca FvH4_4g25350
malus_domestica MD13G1104800.v1.1
prunus_persica Prupe.1G241700_v2.0.a1
pyrus_communis pycom13g09100
rosa_chinensis RchiOBHm_Chr4g0432631
rosa_laevigata RLG00000006828
rosa_multiflora Rmu_sc0004612.1_g000006
rosa_roxburghii Rroxscaffold_5G00374100
rosa_rugosa Rorug04G0260900.1
rosa_samantha Rh4BG323500 Rh4CG338600 Rh4DG319100
rosa_wichuraiana Rw4G027440

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 155
AccB1I GGYRCC 1 cut(s) 682
AclWI GGATC 5 cut(s) 237, 250, 260, 260, 798
AcoI YGGCCR 1 cut(s) 122
AcsI RAATTY 2 cut(s) 363, 1020
AcuI CTGAAG 2 cut(s) 71, 1112
AfaI GTAC 3 cut(s) 284, 781, 972
AfiI CCNNNNNNNGG 2 cut(s) 131, 224
AflII CTTAAG 1 cut(s) 1526
AgsI TTSAA 8 cut(s) 273, 304, 370, 536, 647, 1291, 1345, 1460
AluBI AGCT 8 cut(s) 50, 581, 653, 661, 814, 822, 939, 1324
AluI AGCT 8 cut(s) 50, 581, 653, 661, 814, 822, 939, 1324
Alw21I GWGCWC 2 cut(s) 477, 663
Alw26I GTCTC 1 cut(s) 1121
Alw44I GTGCAC 1 cut(s) 473
AlwI GGATC 5 cut(s) 237, 250, 260, 260, 798
Ama87I CYCGRG 1 cut(s) 1221
AoxI GGCC 3 cut(s) 61, 122, 1027
ApaLI GTGCAC 1 cut(s) 473
ApeKI GCWGC 5 cut(s) 47, 50, 871, 1421, 1424
ApoI RAATTY 2 cut(s) 363, 1020
ArsI GACNNNNNNTTYG 2 cut(s) 1338, 1370
Asp700I GAANNNNTTC 2 cut(s) 543, 1340
AspA2I CCTAGG 1 cut(s) 1532
AspLEI GCGC 1 cut(s) 1035
AspS9I GGNCC 4 cut(s) 61, 110, 607, 1367
AsuHPI GGTGA 5 cut(s) 88, 1076, 1331, 1531, 1552
AvaI CYCGRG 1 cut(s) 1221
AvaII GGWCC 3 cut(s) 110, 607, 1367
AvrII CCTAGG 1 cut(s) 1532
AxyI CCTNAGG 1 cut(s) 984
BaeGI GKGCMC 1 cut(s) 477
BalI TGGCCA 1 cut(s) 124
BamHI GGATCC 1 cut(s) 242
BanI GGYRCC 1 cut(s) 682
BanII GRGCYC 2 cut(s) 663, 1222
Bbv12I GWGCWC 2 cut(s) 477, 663
BbvI GCAGC 5 cut(s) 37, 59, 883, 1408, 1436
BccI CCATC 8 cut(s) 52, 353, 490, 1055, 1093, 1190, 1296, 1310
BcgI CGANNNNNNTGC 2 cut(s) 413, 447
BclI TGATCA 1 cut(s) 195
BcoDI GTCTC 1 cut(s) 1121
BfaI CTAG 1 cut(s) 1533
BfmI CTRYAG 4 cut(s) 220, 576, 942, 1422
BfoI RGCGCY 1 cut(s) 1036
BfrI CTTAAG 1 cut(s) 1526
BisI GCNGC 5 cut(s) 48, 51, 872, 1422, 1425
BlnI CCTAGG 1 cut(s) 1532
BlsI GCNGC 5 cut(s) 49, 52, 873, 1423, 1426
Bme18I GGWCC 3 cut(s) 110, 607, 1367
BmeT110I CYCGRG 1 cut(s) 1221
BmgT120I GGNCC 4 cut(s) 61, 110, 607, 1367
BmiI GGNNCC 3 cut(s) 244, 684, 1368
BmsI GCATC 1 cut(s) 411
Bpu10I CCTNAGC 1 cut(s) 1436
BpuEI CTTGAG 1 cut(s) 725
BsaJI CCNNGG 5 cut(s) 186, 247, 1245, 1370, 1532
BsaXI ACNNNNNCTCC 2 cut(s) 434, 464
Bsc4I CCNNNNNNNGG 2 cut(s) 131, 224
Bse1I ACTGG 3 cut(s) 29, 125, 1148
Bse21I CCTNAGG 1 cut(s) 984
BseDI CCNNGG 5 cut(s) 186, 247, 1245, 1370, 1532
BseGI GGATG 3 cut(s) 46, 364, 979
BseLI CCNNNNNNNGG 2 cut(s) 131, 224
BseMII CTCAG 6 cut(s) 635, 648, 975, 1116, 1342, 1450
BseNI ACTGG 3 cut(s) 29, 125, 1148
BseRI GAGGAG 1 cut(s) 240
BseSI GKGCMC 1 cut(s) 477
BseXI GCAGC 5 cut(s) 37, 59, 883, 1408, 1436
BshFI GGCC 3 cut(s) 63, 124, 1029
BshNI GGYRCC 1 cut(s) 682
BsiHKAI GWGCWC 2 cut(s) 477, 663
BsiHKCI CYCGRG 1 cut(s) 1221
BslFI GGGAC 2 cut(s) 944, 1284
BslI CCNNNNNNNGG 2 cut(s) 131, 224
BsmAI GTCTC 1 cut(s) 1121
BsmFI GGGAC 2 cut(s) 944, 1284
BsmI GAATGC 2 cut(s) 424, 445
BsnI GGCC 3 cut(s) 63, 124, 1029
BsoBI CYCGRG 1 cut(s) 1221
Bsp1286I GDGCHC 3 cut(s) 477, 663, 1222
Bsp143I GATC 9 cut(s) 195, 242, 252, 265, 382, 529, 790, 829, 838
Bsp19I CCATGG 3 cut(s) 186, 247, 1245
BspANI GGCC 3 cut(s) 63, 124, 1029
BspCNI CTCAG 6 cut(s) 634, 649, 976, 1117, 1341, 1449
BspHI TCATGA 1 cut(s) 343
BspLI GGNNCC 3 cut(s) 244, 684, 1368
BspMAI CTGCAG 1 cut(s) 1426
BspPI GGATC 5 cut(s) 237, 250, 260, 260, 798
BspT107I GGYRCC 1 cut(s) 682
BspTI CTTAAG 1 cut(s) 1526
BsrI ACTGG 3 cut(s) 29, 125, 1148
BssECI CCNNGG 5 cut(s) 186, 247, 1245, 1370, 1532
BssMI GATC 9 cut(s) 195, 242, 252, 265, 382, 529, 790, 829, 838
BssT1I CCWWGG 5 cut(s) 186, 247, 1245, 1370, 1532
Bst4CI ACNGT 4 cut(s) 784, 1072, 1081, 1417
Bst6I CTCTTC 2 cut(s) 728, 795
BstAFI CTTAAG 1 cut(s) 1526
BstC8I GCNNGC 2 cut(s) 83, 1031
BstDEI CTNAG 8 cut(s) 621, 657, 823, 893, 984, 1125, 1328, 1436
BstDSI CCRYGG 3 cut(s) 186, 247, 1245
BstF5I GGATG 3 cut(s) 46, 364, 979
BstH2I RGCGCY 1 cut(s) 1036
BstHHI GCGC 1 cut(s) 1035
BstKTI GATC 9 cut(s) 198, 245, 255, 268, 385, 532, 793, 832, 841
BstMAI GTCTC 1 cut(s) 1121
BstMBI GATC 9 cut(s) 195, 242, 252, 265, 382, 529, 790, 829, 838
BstMWI GCNNNNNNNGC 2 cut(s) 188, 903
BstNSI RCATGY 2 cut(s) 289, 1504
BstSFI CTRYAG 4 cut(s) 220, 576, 942, 1422
BstSLI GKGCMC 1 cut(s) 477
BstV1I GCAGC 5 cut(s) 37, 59, 883, 1408, 1436
BstX2I RGATCY 1 cut(s) 242
BstXI CCANNNNNNTGG 1 cut(s) 120
BstYI RGATCY 1 cut(s) 242
Bsu36I CCTNAGG 1 cut(s) 984
BsuRI GGCC 3 cut(s) 63, 124, 1029
BtgI CCRYGG 3 cut(s) 186, 247, 1245
BtsCI GGATG 3 cut(s) 46, 364, 979
BtsI GCAGTG 1 cut(s) 1122
BtsIMutI CAGTG 6 cut(s) 18, 789, 1086, 1122, 1155, 1336
Cac8I GCNNGC 2 cut(s) 83, 1031
CciI TCATGA 1 cut(s) 343
CfoI GCGC 1 cut(s) 1035
Cfr13I GGNCC 4 cut(s) 61, 110, 607, 1367
CseI GACGC 1 cut(s) 444
Csp6I GTAC 3 cut(s) 283, 780, 971
CviQI GTAC 3 cut(s) 283, 780, 971
DdeI CTNAG 8 cut(s) 621, 657, 823, 893, 984, 1125, 1328, 1436
DpnI GATC 9 cut(s) 197, 244, 254, 267, 384, 531, 792, 831, 840
DpnII GATC 9 cut(s) 195, 242, 252, 265, 382, 529, 790, 829, 838
EaeI YGGCCR 1 cut(s) 122
Eam1104I CTCTTC 2 cut(s) 728, 795
EarI CTCTTC 2 cut(s) 728, 795
Ecl136II GAGCTC 1 cut(s) 661
Eco130I CCWWGG 5 cut(s) 186, 247, 1245, 1370, 1532
Eco24I GRGCYC 2 cut(s) 663, 1222
Eco47I GGWCC 3 cut(s) 110, 607, 1367
Eco53kI GAGCTC 1 cut(s) 661
Eco57I CTGAAG 2 cut(s) 71, 1112
Eco81I CCTNAGG 1 cut(s) 984
Eco88I CYCGRG 1 cut(s) 1221
EcoICRI GAGCTC 1 cut(s) 661
EcoT14I CCWWGG 5 cut(s) 186, 247, 1245, 1370, 1532
EcoT22I ATGCAT 1 cut(s) 426
EcoT38I GRGCYC 2 cut(s) 663, 1222
ErhI CCWWGG 5 cut(s) 186, 247, 1245, 1370, 1532
FalI AAGNNNNNCTT 6 cut(s) 528, 560, 531, 563, 860, 892
FaqI GGGAC 2 cut(s) 944, 1284
FbaI TGATCA 1 cut(s) 195
Fnu4HI GCNGC 5 cut(s) 48, 51, 872, 1422, 1425
FokI GGATG 3 cut(s) 53, 371, 966
FriOI GRGCYC 2 cut(s) 663, 1222
Fsp4HI GCNGC 5 cut(s) 48, 51, 872, 1422, 1425
FspBI CTAG 1 cut(s) 1533
GlaI GCGC 1 cut(s) 1034
GluI GCNGC 5 cut(s) 48, 51, 872, 1422, 1425
HaeII RGCGCY 1 cut(s) 1036
HaeIII GGCC 3 cut(s) 63, 124, 1029
HgaI GACGC 1 cut(s) 444
HhaI GCGC 1 cut(s) 1035
Hin6I GCGC 1 cut(s) 1033
HinP1I GCGC 1 cut(s) 1033
HinfI GANTC 8 cut(s) 16, 593, 625, 675, 726, 1259, 1336, 1522
HphI GGTGA 5 cut(s) 88, 1076, 1331, 1531, 1552
Hpy166II GTNNAC 3 cut(s) 96, 475, 555
Hpy188I TCNGA 9 cut(s) 21, 90, 195, 418, 624, 674, 838, 883, 1126
Hpy188III TCNNGA 6 cut(s) 304, 344, 536, 730, 983, 1193
Hpy8I GTNNAC 3 cut(s) 96, 475, 555
HpyAV CCTTC 7 cut(s) 279, 385, 396, 781, 789, 921, 1454
HpyCH4III ACNGT 4 cut(s) 784, 1072, 1081, 1417
HpyF10VI GCNNNNNNNGC 2 cut(s) 188, 903
HpyF3I CTNAG 8 cut(s) 621, 657, 823, 893, 984, 1125, 1328, 1436
HspAI GCGC 1 cut(s) 1033
Ksp22I TGATCA 1 cut(s) 195
Kzo9I GATC 9 cut(s) 195, 242, 252, 265, 382, 529, 790, 829, 838
LmnI GCTCC 2 cut(s) 394, 442
Lsp1109I GCAGC 5 cut(s) 37, 59, 883, 1408, 1436
LweI GCATC 1 cut(s) 411
MaeI CTAG 1 cut(s) 1533
MaeIII GTNAC 2 cut(s) 1040, 1540
MalI GATC 9 cut(s) 197, 244, 254, 267, 384, 531, 792, 831, 840
MboI GATC 9 cut(s) 195, 242, 252, 265, 382, 529, 790, 829, 838
MfeI CAATTG 1 cut(s) 1155
MflI RGATCY 1 cut(s) 242
MhlI GDGCHC 3 cut(s) 477, 663, 1222
MlsI TGGCCA 1 cut(s) 124
MluCI AATT 7 cut(s) 363, 720, 1020, 1052, 1155, 1263, 1340
MluNI TGGCCA 1 cut(s) 124
MlyI GAGTC 2 cut(s) 1268, 1531
Mox20I TGGCCA 1 cut(s) 124
Mph1103I ATGCAT 1 cut(s) 426
MroXI GAANNNNTTC 2 cut(s) 543, 1340
MscI TGGCCA 1 cut(s) 124
MseI TTAA 5 cut(s) 1133, 1308, 1359, 1449, 1527
MslI CAYNNNNRTG 1 cut(s) 450
Msp20I TGGCCA 1 cut(s) 124
MspA1I CMGCKG 1 cut(s) 50
MspCI CTTAAG 1 cut(s) 1526
MunI CAATTG 1 cut(s) 1155
Mva1269I GAATGC 2 cut(s) 424, 445
MwoI GCNNNNNNNGC 2 cut(s) 188, 903
NcoI CCATGG 3 cut(s) 186, 247, 1245
NdeII GATC 9 cut(s) 195, 242, 252, 265, 382, 529, 790, 829, 838
NlaIV GGNNCC 3 cut(s) 244, 684, 1368
NmuCI GTSAC 1 cut(s) 1540
NsiI ATGCAT 1 cut(s) 426
NspI RCATGY 2 cut(s) 289, 1504
PaeR7I CTCGAG 1 cut(s) 1221
PagI TCATGA 1 cut(s) 343
PctI GAATGC 2 cut(s) 424, 445
PdmI GAANNNNTTC 2 cut(s) 543, 1340
PfeI GAWTC 6 cut(s) 16, 593, 625, 675, 726, 1336
PkrI GCNGC 5 cut(s) 49, 52, 873, 1423, 1426
PleI GAGTC 2 cut(s) 1267, 1530
PpsI GAGTC 2 cut(s) 1267, 1530
PsiI TTATAA 1 cut(s) 155
Psp124BI GAGCTC 1 cut(s) 663
PspN4I GGNNCC 3 cut(s) 244, 684, 1368
PspPI GGNCC 4 cut(s) 61, 110, 607, 1367
PspXI VCTCGAGB 1 cut(s) 1221
PstI CTGCAG 1 cut(s) 1426
PsuI RGATCY 1 cut(s) 242
PvuII CAGCTG 1 cut(s) 50
RsaI GTAC 3 cut(s) 284, 781, 972
RsaNI GTAC 3 cut(s) 283, 780, 971
RseI CAYNNNNRTG 1 cut(s) 450
SacI GAGCTC 1 cut(s) 663
SaqAI TTAA 5 cut(s) 1133, 1308, 1359, 1449, 1527
SatI GCNGC 5 cut(s) 48, 51, 872, 1422, 1425
Sau3AI GATC 9 cut(s) 195, 242, 252, 265, 382, 529, 790, 829, 838
Sau96I GGNCC 4 cut(s) 61, 110, 607, 1367
SchI GAGTC 2 cut(s) 1268, 1531
SduI GDGCHC 3 cut(s) 477, 663, 1222
SfaNI GCATC 1 cut(s) 411
SfcI CTRYAG 4 cut(s) 220, 576, 942, 1422
Sfr274I CTCGAG 1 cut(s) 1221
SinI GGWCC 3 cut(s) 110, 607, 1367
SlaI CTCGAG 1 cut(s) 1221
SmiMI CAYNNNNRTG 1 cut(s) 450
SmlI CTYRAG 3 cut(s) 740, 1221, 1526
SmoI CTYRAG 3 cut(s) 740, 1221, 1526
Sse9I AATT 7 cut(s) 363, 720, 1020, 1052, 1155, 1263, 1340
SspMI CTAG 1 cut(s) 1533
SstI GAGCTC 1 cut(s) 663
StyI CCWWGG 5 cut(s) 186, 247, 1245, 1370, 1532
TaaI ACNGT 4 cut(s) 784, 1072, 1081, 1417
TaqI TCGA 4 cut(s) 729, 793, 1222, 1252
TasI AATT 7 cut(s) 363, 720, 1020, 1052, 1155, 1263, 1340
TatI WGTACW 2 cut(s) 282, 779
TfiI GAWTC 6 cut(s) 16, 593, 625, 675, 726, 1336
Tru1I TTAA 5 cut(s) 1133, 1308, 1359, 1449, 1527
Tru9I TTAA 5 cut(s) 1133, 1308, 1359, 1449, 1527
TscAI CASTG 6 cut(s) 18, 789, 1086, 1122, 1155, 1336
TseFI GTSAC 1 cut(s) 1540
TseI GCWGC 5 cut(s) 47, 50, 871, 1421, 1424
Tsp45I GTSAC 1 cut(s) 1540
TspGWI ACGGA 1 cut(s) 618
TspRI CASTG 6 cut(s) 18, 789, 1086, 1122, 1155, 1336
Vha464I CTTAAG 1 cut(s) 1526
VneI GTGCAC 1 cut(s) 473
VpaK11BI GGWCC 3 cut(s) 110, 607, 1367
XapI RAATTY 2 cut(s) 363, 1020
XceI RCATGY 2 cut(s) 289, 1504
XcmI CCANNNNNNNNNTGG 3 cut(s) 466, 693, 1252
XhoI CTCGAG 1 cut(s) 1221
XmaJI CCTAGG 1 cut(s) 1532
XmnI GAANNNNTTC 2 cut(s) 543, 1340
XspI CTAG 1 cut(s) 1533
Zsp2I ATGCAT 1 cut(s) 426
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.