AT1G17260

Autoinhibited H( )-ATPase isoform 10

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
OG0014890
Physical Location & Seq
Forward (+)
5904058 .. 5908898
4841 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G17260.1

Sequence Viewer

Length: 2844 bp
ATGGCCGAGGATTTGGACAAGCCATTGCTGGATCCTGATACTTTCAACAGAAAAGGAATTGATTTGGGTATATTGCCGTTGGAGGAGGTTTTTGAATACCTAAGAACATCGCCTCAAGGGCTTTTATCTGGAGATGCTGAAGAGAGATTGAAGATATTTGGTCCTAACAGACTTGAAGAGAAACAGGAGAACAGATTTGTGAAATTCTTAGGTTTTATGTGGAATCCCTTGTCATGGGTTATGGAAGCTGCTGCATTGATGGCCATTGCCCTCGCTAATAGTCAAAGTCTAGGTCCTGACTGGGAAGACTTTACTGGAATCGTTTGCCTTTTGCTGATCAACGCAACAATCAGCTTCTTTGAAGAAAACAATGCTGGGAATGCTGCTGCAGCTCTTATGGCTCGCTTGGCTTTAAAAACAAGAGTTCTTAGAGATGGACAGTGGCAAGAACAAGATGCTTCTATCTTGGTACCTGGTGATATAATTAGCATTAAGCTTGGGGATATCATTCCTGCAGATGCTCGCCTTCTTGAAGGAGACCCCTTGAAGATTGATCAGTCAGTGCTGACCGGAGAATCACTACCTGTGACCAAGAAGAAGGGTGAACAGGTCTTTTCTGGCTCTACTTGTAAACAAGGTGAAATAGAAGCTGTTGTGATAGCAACTGGATCGACCACCTTCTTTGGAAAAACAGCACGCTTGGTGGACAGTACAGATGTAACTGGACATTTTCAGCAGGTTCTTACATCGATTGGAAACTTCTGCATTTGCTCCATTGCTGTTGGAATGGTTCTTGAAATCATTATCATGTTCCCTGTACAACATCGCTCTTACAGAATTGGGATCAATAATCTTCTTGTACTACTGATTGGAGGGATACCCATTGCCATGCCCACTGTACTATCTGTAACGCTTGCCATTGGATCTCATCGACTTTCACAACAGGGTGCCATTACGAAAAGAATGACCGCAATAGAGGAAATGGCTGGGATGGATGTACTCTGCTGTGATAAAACTGGAACCCTTACTTTGAACAGTCTTACCGTTGATAAAAATCTTATTGAGGTATTCGTTGACTACATGGACAAGGATACAATTTTGTTGCTTGCAGGCCGAGCTTCACGACTAGAAAATCAGGATGCTATAGATGCAGCCATTGTTAGCATGCTTGCAGATCCCAGAGAGGCACGTGCAAACATTAGAGAAATCCATTTCTTACCATTCAATCCTGTGGACAAACGTACTGCAATAACGTATATTGATTCCGATGGAAAATGGTATCGTGCTACCAAAGGTGCTCCTGAACAGGTTCTAAACTTGTGTCAGCAGAAAAATGAGATTGCGCAAAGAGTTTATGCCATCATTGATAGATTTGCAGAAAAAGGTTTGAGGTCTCTTGCGGTTGCTTATCAGGAAATTCCAGAGAAAAGCAACAACAGTCCTGGAGGACCATGGAGGTTCTGTGGTCTGTTGCCACTGTTTGATCCCCCAAGGCATGATAGCGGTGAAACCATCCTTAGAGCTCTTAGCCTGGGAGTTTGCGTTAAGATGATCACTGGTGATCAATTGGCGATTGCAAAGGAGACAGGCAGACGTCTTGGAATGGGAACCAACATGTATCCTTCTTCCTCTTTGTTAGGCCACAACAATGATGAGCATGAAGCCATTCCAGTGGATGAGCTAATTGAAATGGCAGATGGATTTGCTGGAGTTTTCCCTGAACATAAGTATGAGATTGTAAAGATTTTACAAGAAATGAAGCATGTGGTTGGAATGACCGGAGATGGTGTGAATGATGCTCCTGCTCTCAAAAAAGCTGACATCGGAATAGCTGTCGCAGATGCAACAGATGCTGCAAGAAGTTCTGCTGACATAGTACTAACTGATCCCGGCTTAAGTGTAATTATCAGTGCTGTCTTGACCAGCAGAGCCATTTTCCAGCGGATGAGGAACTATACAGTATATGCAGTCTCTATCACCATACGCATAGTGCTTGGTTTTACACTTTTAGCGTTGATATGGGAATACGACTTCCCACCTTTCATGGTTCTGATAATCGCAATACTCAATGACGGGACTATCATGACTATTTCTAAAGATCGAGTTAGGCCATCTCCTACACCCGAGAGTTGGAAGCTCAACCAGATATTTGCGACAGGAATTGTCATTGGAACATATCTAGCATTGGTCACCGTCCTGTTTTACTGGATCATTGTTTCTACCACCTTCTTCGAGAAACACTTCCATGTAAAATCAATTGCCAACAACAGTGAACAAGTGTCATCCGCGATGTATCTCCAAGTGAGCATCATCAGTCAGGCACTCATATTTGTAACACGTAGTCGAGGCTGGTCATTTTTTGAACGTCCCGGGACTCTCCTGATTTTTGCCTTCATTCTTGCTCAACTTGCGGCTACATTAATTGCTGTGTATGCCAACATCAGCTTTGCTAAAATCACCGGCATTGGATGGAGATGGGCAGGTGTTATATGGTTATACAGTCTGATATTTTACATACCTCTAGATGTTATAAAGTTTGTCTTTCACTACGCATTGAGTGGAGAAGCTTGGAATCTCGTATTGGACCGTAAGACAGCTTTTACTTACAAGAAAGATTATGGGAAAGATGATGGATCGCCCAATGTAACCATCTCTCAGAGAAGTCGTTCCGCAGAAGAACTCAGAGGAAGCCGTTCTCGCGCTTCTTGGATCGCTGAACAAACCAGGAGGCGTGCAGAAATCGCCAGGCTTCTAGAGGTTCATTCAGTGTCAAGGCATTTAGAATCTGTGATCAAACTCAAACAAATTGACCAAAGGATGATCCGTGCAGCTCATACTGTCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000325 GO:0003006 GO:0003674 GO:0003824 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0005911 GO:0006725 GO:0006810 GO:0006811 GO:0006812 GO:0006873 GO:0006885 GO:0006996 GO:0007033 GO:0007035 GO:0007275 GO:0008150 GO:0008152 GO:0008324 GO:0008553 GO:0009058 GO:0009506 GO:0009507 GO:0009536 GO:0009698 GO:0009699 GO:0009705 GO:0009791 GO:0009987 GO:0010023 GO:0010154 GO:0010214 GO:0015075 GO:0015077 GO:0015078 GO:0015318 GO:0015399 GO:0015405 GO:0015662 GO:0015672 GO:0016020 GO:0016043 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0017144 GO:0018130 GO:0018958 GO:0019438 GO:0019725 GO:0019748 GO:0019829 GO:0022414 GO:0022804 GO:0022853 GO:0022857 GO:0022890 GO:0030003 GO:0030004 GO:0030054 GO:0030641 GO:0031090 GO:0032501 GO:0032502 GO:0034220 GO:0036442 GO:0042592 GO:0042623 GO:0042625 GO:0042626 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043492 GO:0044237 GO:0044249 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0044550 GO:0045851 GO:0046189 GO:0046483 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0048878 GO:0050801 GO:0051179 GO:0051234 GO:0051452 GO:0051453 GO:0055044 GO:0055067 GO:0055080 GO:0055082 GO:0055085 GO:0061458 GO:0065007 GO:0065008 GO:0071704 GO:0071840 GO:0090662 GO:0098588 GO:0098655 GO:0098660 GO:0098662 GO:0098771 GO:0098805 GO:0099131 GO:0099132 GO:1901360 GO:1901362 GO:1901576 GO:1901615 GO:1901617 GO:1902600
KEGG Pathways
Metabolic & Signaling
ko00190 map00190
Pfam Domains
Protein Families
Cation_ATPase_N E1-E2_ATPase Hydrolase

Protein Analysis

947

Amino Acids

104.81

Weight (kDa)

6.02

Isoelectric Point (pI)

38.14

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Cation_ATPase_N PF00690 25 - 87 6.7e-14 Cation transporter/ATPase, N-terminus
E1-E2_ATPase PF00122 139 - 235 9.6e-32 P-type ATPase actuator domain
Hydrolase PF00702 331 - 607 1.7e-11 haloacid dehalogenase-like hydrolase
Cation_ATPase PF13246 379 - 499 9.3e-08 P-type ATPase, cytoplasmic domain N
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0014890)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G17260
fragaria_vesca FvH4_6g36241
malus_domestica MD09G1171300.v1.1 MD17G1155800.v1.1
prunus_persica Prupe.3G029800_v2.0.a1 Prupe.3G029800_v2.0.a1
pyrus_communis pycom09g08870 pycom17g14850
rosa_chinensis RchiOBHm_Chr2g0148211
rosa_laevigata RLG00000020327
rosa_multiflora Rmu_sc0002583.1_g000001
rosa_roxburghii Rroxscaffold_2G00098990
rosa_rugosa Rorug02G0404500
rosa_samantha Rh2BG476300 Rh2CG449900
rosa_wichuraiana Rw2G037760

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2531
AarI CACCTGC 1 cut(s) 2471
AatII GACGTC 1 cut(s) 1597
Acc16I TGCGCA 1 cut(s) 1344
Acc36I ACCTGC 2 cut(s) 727, 2471
Acc65I GGTACC 1 cut(s) 469
AccB1I GGYRCC 2 cut(s) 469, 947
AccII CGCG 2 cut(s) 2288, 2700
AciI CCGC 7 cut(s) 969, 1400, 1503, 1942, 2286, 2411, 2670
AcoI YGGCCR 2 cut(s) 3, 261
AcsI RAATTY 2 cut(s) 203, 1416
AcuI CTGAAG 1 cut(s) 159
AcvI CACGTG 1 cut(s) 1190
AcyI GRCGYC 1 cut(s) 1594
AfaI GTAC 8 cut(s) 471, 712, 819, 861, 900, 999, 1243, 1878
AfiI CCNNNNNNNGG 2 cut(s) 234, 2130
AflII CTTAAG 1 cut(s) 1894
AflIII ACRYGT 2 cut(s) 1614, 2336
AjnI CCWGG 5 cut(s) 472, 1441, 1530, 2723, 2744
AjuI GAANNNNNNNTTGG 2 cut(s) 2564, 2596
Alw21I GWGCWC 2 cut(s) 1300, 1525
Alw26I GTCTC 4 cut(s) 531, 1398, 1577, 1975
AlwNI CAGNNNCTG 1 cut(s) 1853
Ama87I CYCGRG 2 cut(s) 2123, 2369
AoxI GGCC 5 cut(s) 3, 261, 1111, 1639, 2108
ApeKI GCWGC 8 cut(s) 248, 251, 383, 386, 389, 1151, 1853, 2828
ApoI RAATTY 2 cut(s) 203, 1416
ArsI GACNNNNNNTTYG 2 cut(s) 277, 309
AseI ATTAAT 1 cut(s) 2420
Asp700I GAANNNNTTC 5 cut(s) 1308, 1665, 2240, 2665, 2692
Asp718I GGTACC 1 cut(s) 469
AspLEI GCGC 2 cut(s) 1345, 2702
AspS9I GGNCC 4 cut(s) 161, 293, 1448, 2584
AsuC2I CCSGG 3 cut(s) 1890, 2370, 2371
AsuHPI GGTGA 8 cut(s) 488, 614, 650, 1517, 1571, 1969, 2182, 2449
AvaI CYCGRG 2 cut(s) 2123, 2369
AvaII GGWCC 4 cut(s) 161, 293, 1448, 2584
BalI TGGCCA 1 cut(s) 263
BamHI GGATCC 1 cut(s) 31
BanI GGYRCC 2 cut(s) 469, 947
BanII GRGCYC 1 cut(s) 1525
BbrPI CACGTG 1 cut(s) 1190
BbsI GAAGAC 1 cut(s) 312
Bbv12I GWGCWC 2 cut(s) 1300, 1525
BbvI GCAGC 8 cut(s) 235, 238, 370, 373, 401, 1163, 1840, 2840
BceAI ACGGC 2 cut(s) 61, 2676
BcgI CGANNNNNNTGC 2 cut(s) 651, 685
BciT130I CCWGG 5 cut(s) 474, 1443, 1532, 2725, 2746
BciVI GTATCC 3 cut(s) 870, 1084, 1629
BclI TGATCA 5 cut(s) 336, 553, 1551, 1561, 2790
BcnI CCSGG 3 cut(s) 1890, 2370, 2371
BcoDI GTCTC 4 cut(s) 531, 1398, 1577, 1975
BfaI CTAG 5 cut(s) 290, 1127, 2180, 2522, 2753
BfmI CTRYAG 3 cut(s) 387, 513, 1143
BfrI CTTAAG 1 cut(s) 1894
BfuAI ACCTGC 2 cut(s) 727, 2471
BfuI GTATCC 3 cut(s) 870, 1084, 1629
BglI GCCNNNNNGGC 1 cut(s) 118
BisI GCNGC 9 cut(s) 249, 252, 384, 387, 390, 1152, 1854, 2412, 2829
BlsI GCNGC 9 cut(s) 250, 253, 385, 388, 391, 1153, 1855, 2413, 2830
BmcAI AGTACT 1 cut(s) 1878
Bme1390I CCNGG 8 cut(s) 474, 1443, 1532, 1890, 2370, 2371, 2725, 2746
Bme18I GGWCC 4 cut(s) 161, 293, 1448, 2584
BmeT110I CYCGRG 2 cut(s) 2123, 2369
BmgT120I GGNCC 4 cut(s) 161, 293, 1448, 2584
BmiI GGNNCC 5 cut(s) 33, 471, 949, 1021, 1609
BmrFI CCNGG 8 cut(s) 474, 1443, 1532, 1890, 2370, 2371, 2725, 2746
BmrI ACTGGG 1 cut(s) 310
BmsI GCATC 9 cut(s) 124, 445, 508, 1129, 1138, 1786, 1831, 1840, 2316
BmuI ACTGGG 1 cut(s) 310
BpiI GAAGAC 1 cut(s) 312
BpmI CTGGAG 3 cut(s) 150, 1464, 1728
BpuEI CTTGAG 1 cut(s) 99
BpuMI CCSGG 3 cut(s) 1890, 2370, 2371
Bsa29I ATCGAT 1 cut(s) 749
BsaAI YACGTR 2 cut(s) 1190, 2339
BsaBI GATNNNNATC 1 cut(s) 1053
BsaHI GRCGYC 1 cut(s) 1594
BsaI GGTCTC 2 cut(s) 531, 1398
BsaJI CCNNGG 5 cut(s) 6, 1451, 1490, 1531, 2369
BsaWI WCCGGW 2 cut(s) 569, 1778
BsaXI ACNNNNNCTCC 6 cut(s) 1447, 1477, 1527, 1557, 1773, 1803
Bsc4I CCNNNNNNNGG 2 cut(s) 234, 2130
Bse118I RCCGGY 1 cut(s) 2459
Bse1I ACTGG 8 cut(s) 305, 319, 670, 727, 1021, 1561, 1670, 2210
Bse3DI GCAATG 4 cut(s) 23, 264, 774, 882
Bse8I GATNNNNATC 1 cut(s) 1053
BseBI CCWGG 5 cut(s) 474, 1443, 1532, 2725, 2746
BseCI ATCGAT 1 cut(s) 749
BseDI CCNNGG 5 cut(s) 6, 1451, 1490, 1531, 2369
BseGI GGATG 9 cut(s) 996, 1000, 1144, 1512, 1681, 1950, 2282, 2474, 2823
BseJI GATNNNNATC 1 cut(s) 1053
BseLI CCNNNNNNNGG 2 cut(s) 234, 2130
BseMI GCAATG 4 cut(s) 23, 264, 774, 882
BseMII CTCAG 2 cut(s) 2669, 2695
BseNI ACTGG 8 cut(s) 305, 319, 670, 727, 1021, 1561, 1670, 2210
BseRI GAGGAG 1 cut(s) 98
BseXI GCAGC 8 cut(s) 235, 238, 370, 373, 401, 1163, 1840, 2840
BseYI CCCAGC 2 cut(s) 374, 986
BsgI GTGCAG 1 cut(s) 2754
Bsh1236I CGCG 2 cut(s) 2288, 2700
BshFI GGCC 5 cut(s) 5, 263, 1113, 1641, 2110
BshNI GGYRCC 2 cut(s) 469, 947
BshVI ATCGAT 1 cut(s) 749
BsiHKAI GWGCWC 2 cut(s) 1300, 1525
BsiHKCI CYCGRG 2 cut(s) 2123, 2369
BsiSI CCGG 5 cut(s) 570, 1779, 1890, 2370, 2460
BslFI GGGAC 3 cut(s) 2089, 2352, 2386
BslI CCNNNNNNNGG 2 cut(s) 234, 2130
BsmAI GTCTC 4 cut(s) 531, 1398, 1577, 1975
BsmFI GGGAC 3 cut(s) 2089, 2352, 2386
BsmI GAATGC 1 cut(s) 385
BsnI GGCC 5 cut(s) 5, 263, 1113, 1641, 2110
Bso31I GGTCTC 2 cut(s) 531, 1398
BsoBI CYCGRG 2 cut(s) 2123, 2369
Bsp1286I GDGCHC 2 cut(s) 1300, 1525
Bsp1407I TGTACA 1 cut(s) 817
Bsp19I CCATGG 1 cut(s) 1451
BspACI CCGC 7 cut(s) 969, 1400, 1503, 1942, 2286, 2411, 2670
BspANI GGCC 5 cut(s) 5, 263, 1113, 1641, 2110
BspCNI CTCAG 2 cut(s) 2668, 2694
BspDI ATCGAT 1 cut(s) 749
BspFNI CGCG 2 cut(s) 2288, 2700
BspHI TCATGA 1 cut(s) 2082
BspLI GGNNCC 5 cut(s) 33, 471, 949, 1021, 1609
BspMAI CTGCAG 2 cut(s) 391, 517
BspMI ACCTGC 2 cut(s) 727, 2471
BspT107I GGYRCC 2 cut(s) 469, 947
BspTI CTTAAG 1 cut(s) 1894
BspTNI GGTCTC 2 cut(s) 531, 1398
BsrDI GCAATG 4 cut(s) 23, 264, 774, 882
BsrFI RCCGGY 1 cut(s) 2459
BsrGI TGTACA 1 cut(s) 817
BsrI ACTGG 8 cut(s) 305, 319, 670, 727, 1021, 1561, 1670, 2210
BssAI RCCGGY 1 cut(s) 2459
BssECI CCNNGG 5 cut(s) 6, 1451, 1490, 1531, 2369
BssNI GRCGYC 1 cut(s) 1594
BssT1I CCWWGG 2 cut(s) 1451, 1490
Bst2UI CCWGG 5 cut(s) 474, 1443, 1532, 2725, 2746
Bst6I CTCTTC 2 cut(s) 135, 171
BstACI GRCGYC 1 cut(s) 1594
BstAFI CTTAAG 1 cut(s) 1894
BstAPI GCANNNNNTGC 1 cut(s) 1850
BstAUI TGTACA 1 cut(s) 817
BstBAI YACGTR 2 cut(s) 1190, 2339
BstC8I GCNNGC 9 cut(s) 403, 523, 697, 915, 1107, 1111, 1166, 1170, 2733
BstDEI CTNAG 7 cut(s) 101, 208, 428, 1517, 1526, 2655, 2681
BstDSI CCRYGG 1 cut(s) 1451
BstEII GGTNACC 1 cut(s) 2188
BstF5I GGATG 9 cut(s) 996, 1000, 1144, 1512, 1681, 1950, 2282, 2474, 2823
BstFNI CGCG 2 cut(s) 2288, 2700
BstHHI GCGC 2 cut(s) 1345, 2702
BstMAI GTCTC 4 cut(s) 531, 1398, 1577, 1975
BstNI CCWGG 5 cut(s) 474, 1443, 1532, 2725, 2746
BstNSI RCATGY 3 cut(s) 1168, 1618, 1766
BstPI GGTNACC 1 cut(s) 2188
BstSCI CCNGG 8 cut(s) 472, 1441, 1530, 1888, 2368, 2369, 2723, 2744
BstSFI CTRYAG 3 cut(s) 387, 513, 1143
BstUI CGCG 2 cut(s) 2288, 2700
BstV1I GCAGC 8 cut(s) 235, 238, 370, 373, 401, 1163, 1840, 2840
BstV2I GAAGAC 1 cut(s) 312
BstX2I RGATCY 3 cut(s) 31, 923, 1174
BstXI CCANNNNNNTGG 1 cut(s) 1672
BstYI RGATCY 3 cut(s) 31, 923, 1174
Bsu15I ATCGAT 1 cut(s) 749
BsuI GTATCC 3 cut(s) 870, 1084, 1629
BsuRI GGCC 5 cut(s) 5, 263, 1113, 1641, 2110
BsuTUI ATCGAT 1 cut(s) 749
BtgI CCRYGG 1 cut(s) 1451
BtgZI GCGATG 3 cut(s) 93, 809, 2303
BtsCI GGATG 9 cut(s) 996, 1000, 1144, 1512, 1681, 1950, 2282, 2474, 2823
BtsIMutI CAGTG 9 cut(s) 446, 567, 894, 1475, 1554, 1677, 1915, 2275, 2772
BveI ACCTGC 2 cut(s) 727, 2471
Cac8I GCNNGC 9 cut(s) 403, 523, 697, 915, 1107, 1111, 1166, 1170, 2733
CaiI CAGNNNCTG 1 cut(s) 1853
CciI TCATGA 1 cut(s) 2082
CfoI GCGC 2 cut(s) 1345, 2702
Cfr10I RCCGGY 1 cut(s) 2459
Cfr13I GGNCC 4 cut(s) 161, 293, 1448, 2584
Cfr9I CCCGGG 1 cut(s) 2369
ClaI ATCGAT 1 cut(s) 749
CsiI ACCWGGT 1 cut(s) 472
Csp6I GTAC 8 cut(s) 470, 711, 818, 860, 899, 998, 1242, 1877
CspCI CAANNNNNGTGG 2 cut(s) 664, 699
CviQI GTAC 8 cut(s) 470, 711, 818, 860, 899, 998, 1242, 1877
DdeI CTNAG 7 cut(s) 101, 208, 428, 1517, 1526, 2655, 2681
DraI TTTAAA 1 cut(s) 414
EaeI YGGCCR 2 cut(s) 3, 261
Eam1104I CTCTTC 2 cut(s) 135, 171
EarI CTCTTC 2 cut(s) 135, 171
Ecl136II GAGCTC 1 cut(s) 1523
Eco130I CCWWGG 2 cut(s) 1451, 1490
Eco24I GRGCYC 1 cut(s) 1525
Eco31I GGTCTC 2 cut(s) 531, 1398
Eco32I GATATC 1 cut(s) 505
Eco47I GGWCC 4 cut(s) 161, 293, 1448, 2584
Eco53kI GAGCTC 1 cut(s) 1523
Eco57I CTGAAG 1 cut(s) 159
Eco72I CACGTG 1 cut(s) 1190
Eco88I CYCGRG 2 cut(s) 2123, 2369
Eco91I GGTNACC 1 cut(s) 2188
EcoICRI GAGCTC 1 cut(s) 1523
EcoO109I RGGNCCY 1 cut(s) 293
EcoO65I GGTNACC 1 cut(s) 2188
EcoRII CCWGG 5 cut(s) 472, 1441, 1530, 2723, 2744
EcoRV GATATC 1 cut(s) 505
EcoT14I CCWWGG 2 cut(s) 1451, 1490
EcoT38I GRGCYC 1 cut(s) 1525
ErhI CCWWGG 2 cut(s) 1451, 1490
FalI AAGNNNNNCTT 2 cut(s) 2525, 2557
FaqI GGGAC 3 cut(s) 2089, 2352, 2386
FbaI TGATCA 5 cut(s) 336, 553, 1551, 1561, 2790
Fnu4HI GCNGC 9 cut(s) 249, 252, 384, 387, 390, 1152, 1854, 2412, 2829
FokI GGATG 9 cut(s) 1003, 1007, 1151, 1499, 1688, 1957, 2269, 2481, 2830
FriOI GRGCYC 1 cut(s) 1525
Fsp4HI GCNGC 9 cut(s) 249, 252, 384, 387, 390, 1152, 1854, 2412, 2829
FspBI CTAG 5 cut(s) 290, 1127, 2180, 2522, 2753
FspI TGCGCA 1 cut(s) 1344
GlaI GCGC 2 cut(s) 1344, 2701
GluI GCNGC 9 cut(s) 249, 252, 384, 387, 390, 1152, 1854, 2412, 2829
GsaI CCCAGC 2 cut(s) 378, 990
GsuI CTGGAG 3 cut(s) 150, 1464, 1728
HaeIII GGCC 5 cut(s) 5, 263, 1113, 1641, 2110
HapII CCGG 5 cut(s) 570, 1779, 1890, 2370, 2460
HhaI GCGC 2 cut(s) 1345, 2702
Hin1I GRCGYC 1 cut(s) 1594
Hin6I GCGC 2 cut(s) 1343, 2700
HinP1I GCGC 2 cut(s) 1343, 2700
HincII GTYRAC 1 cut(s) 1075
HindII GTYRAC 1 cut(s) 1075
HindIII AAGCTT 2 cut(s) 494, 2565
HinfI GANTC 7 cut(s) 223, 318, 575, 1262, 2374, 2572, 2783
HpaII CCGG 5 cut(s) 570, 1779, 1890, 2370, 2460
HphI GGTGA 8 cut(s) 488, 614, 650, 1517, 1571, 1969, 2182, 2449
Hpy166II GTNNAC 6 cut(s) 605, 632, 706, 1075, 1234, 2273
Hpy188I TCNGA 6 cut(s) 1267, 1826, 2052, 2505, 2658, 2684
Hpy8I GTNNAC 6 cut(s) 605, 632, 706, 1075, 1234, 2273
HpyAV CCTTC 7 cut(s) 527, 536, 592, 688, 1632, 2236, 2401
HpyCH4IV ACGT 6 cut(s) 1189, 1240, 1253, 1594, 2338, 2365
HpyF3I CTNAG 7 cut(s) 101, 208, 428, 1517, 1526, 2655, 2681
HpySE526I ACGT 6 cut(s) 1189, 1240, 1253, 1594, 2338, 2365
Hsp92I GRCGYC 1 cut(s) 1594
HspAI GCGC 2 cut(s) 1343, 2700
KpnI GGTACC 1 cut(s) 473
Ksp22I TGATCA 5 cut(s) 336, 553, 1551, 1561, 2790
LmnI GCTCC 3 cut(s) 776, 1303, 1804
Lsp1109I GCAGC 8 cut(s) 235, 238, 370, 373, 401, 1163, 1840, 2840
LweI GCATC 9 cut(s) 124, 445, 508, 1129, 1138, 1786, 1831, 1840, 2316
MabI ACCWGGT 1 cut(s) 472
MaeI CTAG 5 cut(s) 290, 1127, 2180, 2522, 2753
MaeII ACGT 6 cut(s) 1189, 1240, 1253, 1594, 2338, 2365
MaeIII GTNAC 6 cut(s) 586, 718, 907, 2188, 2332, 2644
MfeI CAATTG 2 cut(s) 1565, 2256
MflI RGATCY 3 cut(s) 31, 923, 1174
MhlI GDGCHC 2 cut(s) 1300, 1525
MlsI TGGCCA 1 cut(s) 263
MluNI TGGCCA 1 cut(s) 263
MlyI GAGTC 1 cut(s) 2368
MmeI TCCRAC 4 cut(s) 60, 763, 1750, 2111
Mox20I TGGCCA 1 cut(s) 263
MroXI GAANNNNTTC 5 cut(s) 1308, 1665, 2240, 2665, 2692
MscI TGGCCA 1 cut(s) 263
MseI TTAA 5 cut(s) 413, 492, 1545, 1895, 2420
MslI CAYNNNNRTG 6 cut(s) 806, 887, 1647, 1670, 1728, 2244
Msp20I TGGCCA 1 cut(s) 263
MspA1I CMGCKG 1 cut(s) 1942
MspCI CTTAAG 1 cut(s) 1894
MspI CCGG 5 cut(s) 570, 1779, 1890, 2370, 2460
MspR9I CCNGG 8 cut(s) 474, 1443, 1532, 1890, 2370, 2371, 2725, 2746
MunI CAATTG 2 cut(s) 1565, 2256
Mva1269I GAATGC 1 cut(s) 385
MvaI CCWGG 5 cut(s) 474, 1443, 1532, 2725, 2746
MvnI CGCG 2 cut(s) 2288, 2700
NciI CCSGG 3 cut(s) 1890, 2370, 2371
NcoI CCATGG 1 cut(s) 1451
NlaIV GGNNCC 5 cut(s) 33, 471, 949, 1021, 1609
NmeAIII GCCGAG 2 cut(s) 31, 1139
NmuCI GTSAC 2 cut(s) 586, 2188
NsbI TGCGCA 1 cut(s) 1344
NspI RCATGY 3 cut(s) 1168, 1618, 1766
PaeI GCATGC 1 cut(s) 1168
PagI TCATGA 1 cut(s) 2082
PaqCI CACCTGC 1 cut(s) 2471
PciI ACATGT 1 cut(s) 1614
PctI GAATGC 1 cut(s) 385
PdmI GAANNNNTTC 5 cut(s) 1308, 1665, 2240, 2665, 2692
PfeI GAWTC 6 cut(s) 223, 318, 575, 1262, 2572, 2783
PfoI TCCNGGA 1 cut(s) 1441
PkrI GCNGC 9 cut(s) 250, 253, 385, 388, 391, 1153, 1855, 2413, 2830
PleI GAGTC 1 cut(s) 2368
PmaCI CACGTG 1 cut(s) 1190
PmlI CACGTG 1 cut(s) 1190
PpsI GAGTC 1 cut(s) 2368
Ppu21I YACGTR 2 cut(s) 1190, 2339
PpuMI RGGWCCY 1 cut(s) 293
PscI ACATGT 1 cut(s) 1614
PshBI ATTAAT 1 cut(s) 2420
PsiI TTATAA 1 cut(s) 2531
Psp124BI GAGCTC 1 cut(s) 1525
Psp5II RGGWCCY 1 cut(s) 293
Psp6I CCWGG 5 cut(s) 472, 1441, 1530, 2723, 2744
PspCI CACGTG 1 cut(s) 1190
PspEI GGTNACC 1 cut(s) 2188
PspFI CCCAGC 2 cut(s) 374, 986
PspGI CCWGG 5 cut(s) 472, 1441, 1530, 2723, 2744
PspN4I GGNNCC 5 cut(s) 33, 471, 949, 1021, 1609
PspPI GGNCC 4 cut(s) 161, 293, 1448, 2584
PspPPI RGGWCCY 1 cut(s) 293
PstI CTGCAG 2 cut(s) 391, 517
PstNI CAGNNNCTG 1 cut(s) 1853
PsuI RGATCY 3 cut(s) 31, 923, 1174
RsaI GTAC 8 cut(s) 471, 712, 819, 861, 900, 999, 1243, 1878
RsaNI GTAC 8 cut(s) 470, 711, 818, 860, 899, 998, 1242, 1877
RseI CAYNNNNRTG 6 cut(s) 806, 887, 1647, 1670, 1728, 2244
SacI GAGCTC 1 cut(s) 1525
SaqAI TTAA 5 cut(s) 413, 492, 1545, 1895, 2420
SatI GCNGC 9 cut(s) 249, 252, 384, 387, 390, 1152, 1854, 2412, 2829
Sau96I GGNCC 4 cut(s) 161, 293, 1448, 2584
ScaI AGTACT 1 cut(s) 1878
SchI GAGTC 1 cut(s) 2368
ScrFI CCNGG 8 cut(s) 474, 1443, 1532, 1890, 2370, 2371, 2725, 2746
SduI GDGCHC 2 cut(s) 1300, 1525
SexAI ACCWGGT 1 cut(s) 472
SfaNI GCATC 9 cut(s) 124, 445, 508, 1129, 1138, 1786, 1831, 1840, 2316
SfcI CTRYAG 3 cut(s) 387, 513, 1143
SinI GGWCC 4 cut(s) 161, 293, 1448, 2584
SmaI CCCGGG 1 cut(s) 2371
SmiMI CAYNNNNRTG 6 cut(s) 806, 887, 1647, 1670, 1728, 2244
SmlI CTYRAG 2 cut(s) 114, 1894
SmoI CTYRAG 2 cut(s) 114, 1894
SphI GCATGC 1 cut(s) 1168
SsiI CCGC 7 cut(s) 969, 1400, 1503, 1942, 2286, 2411, 2670
SspMI CTAG 5 cut(s) 290, 1127, 2180, 2522, 2753
SstI GAGCTC 1 cut(s) 1525
StyD4I CCNGG 8 cut(s) 472, 1441, 1530, 1888, 2368, 2369, 2723, 2744
StyI CCWWGG 2 cut(s) 1451, 1490
TaiI ACGT 6 cut(s) 1192, 1243, 1256, 1597, 2341, 2368
TaqI TCGA 6 cut(s) 671, 749, 931, 2101, 2232, 2344
TatI WGTACW 6 cut(s) 710, 817, 859, 898, 997, 1876
TauI GCSGC 1 cut(s) 2414
TfiI GAWTC 6 cut(s) 223, 318, 575, 1262, 2572, 2783
Tru1I TTAA 5 cut(s) 413, 492, 1545, 1895, 2420
Tru9I TTAA 5 cut(s) 413, 492, 1545, 1895, 2420
TscAI CASTG 9 cut(s) 446, 567, 901, 1482, 1561, 1677, 1915, 2275, 2772
TseFI GTSAC 2 cut(s) 586, 2188
TseI GCWGC 8 cut(s) 248, 251, 383, 386, 389, 1151, 1853, 2828
Tsp45I GTSAC 2 cut(s) 586, 2188
TspDTI ATGAA 5 cut(s) 1674, 1772, 2032, 2383, 2750
TspGWI ACGGA 1 cut(s) 2813
TspMI CCCGGG 1 cut(s) 2369
TspRI CASTG 9 cut(s) 446, 567, 901, 1482, 1561, 1677, 1915, 2275, 2772
Vha464I CTTAAG 1 cut(s) 1894
VpaK11BI GGWCC 4 cut(s) 161, 293, 1448, 2584
VspI ATTAAT 1 cut(s) 2420
XapI RAATTY 2 cut(s) 203, 1416
XbaI TCTAGA 2 cut(s) 2521, 2752
XceI RCATGY 3 cut(s) 1168, 1618, 1766
XmaI CCCGGG 1 cut(s) 2369
XmnI GAANNNNTTC 5 cut(s) 1308, 1665, 2240, 2665, 2692
XspI CTAG 5 cut(s) 290, 1127, 2180, 2522, 2753
ZraI GACGTC 1 cut(s) 1595
ZrmI AGTACT 1 cut(s) 1878
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.