FvH4_6g36241

ATPase 10, plasma

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
OG0014890
Physical Location & Seq
Reverse (-)
28477495 .. 28484400
6906 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g36241.t1

Sequence Viewer

Length: 2862 bp
ATGGCTGAAGATCTGGACAAGCCATTGTTGGATCCTGAGAATTTCAATAGAGATGGCATTGATTTGGAACGCTTGCCCCTGGAAGAAGTTTTTGAACAACTGAGAACATCAGCTAGAGGACTTTCTTCTGATGATGCTGAAGCCAGATTGCACATTTTCGGCTACAATAAGCTTGAAGAGAAGACAGAGAACAAATTTTTGAAGTTCCTTAGTTTTATGTGGAACCCCTTGTCATGGGTTATGGAAGCTGCAGCAGTTATGGCACTCGTCCTTGCTAATGGGGGAGGTGAGGGTCCTGACTGGCAAGACTTTGTTGGGATTATTGTCCTATTAATAATCAATTCAACAATTAGTTTTATCGAGGAGAACAATGCCGGAAATGCTGCATCAGCTCTTATGGCTCGTTTAGCTCCAAAGACAAGGGTTCTCAGAGATGGGCAGTGGCAAGAGCAAGATGCAGGTATTTTAGTGCCAGGAGACATAATTAGCATAAAGCTCGGGGATATAGTTCCAGCTGATGCTCGTCTACTTGAAGGAGACCCTCTGAAAATTGACCAGTCGGCTCTTACAGGAGAGTCTCTACCTGTCACCAAGCGGACAGGTGATGAAGTGTTTTCTGGTTCAACATGTAAGCATGGAGAAATTGATGCTGTAGTGATAGCAACCGGAGTTCACTCCTTTTTTGGAAAAGCAGCACATTTAGTTGACTCCACTGAAGTTACGGGACATTTCCAGCAGGTCCTTACTGCCATTGGGAATTTCTGCATTTGCTCTATAGCCGTGGGAATGGTTCTTGAAATCATTGTCATGTTCCCCATACAGCAACGTTCTTACAGGGATGGAATCAACAACCTTCTTGTGCTCCTAATTGGAGGAATTCCAATTGCTATGCCAACAGTGTTATCTGTGACACTTGCAATTGGTTCTCATCGACTATCTCAACAGGGTGCCATTACAAAAAGGATGACAGCAATCGAAGAAATGGCGGGAATGGATGTCCTTTGTAGTGACAAAACTGGAACTCTTACCCTGAATCGCCTCACTGTTGATAAAAACCTGGTTGAGGTTTTTAACAGTAATATAGACAGAGACCAAGTGATCTTATTTGCAGCCAGAGCAGCAAGAATGGAGAATCAAGACGCAATTGATGCAGCTATCACCAATATGCTTGCTGATCCAAAGGAGGCACGAGCAAATATTACAGAAGTGCATTTTCTGCCCTTCAATCCAGTGGACAAGCGTACTGCCATTACATACATCGACTCTGATGGTAATTGGTATAGGGCCAGCAAAGGAGCTCCGGAACAGATTCTAGATCTTTGCCCTGAGAAAAATGAGATTGCTGGAAGAGTACATAGCACCATTGACAAATTTGCTGAAAGAGGATTGCGGTCTCTTGGAGTAGCTTATCAGGAAGTTCCAGAAAAAACTAAAGAAAGTCCTGGGGGTCCTTGGACGTTTTGTGGGTTGTTGCCCTTGTTTGATCCTCCAAGGCATGACAGTGCTGAGACCATTCGTAGAGCGCTCAACCTTGGAGTCGCTGTGAAGATGATTACAGGCGACCAGTTGGCAATTGCGAAGGAGACAGGGAGACGACTTGGTATGGGAACAAACATGTATCCTTCCTCTTCATTATTGGGCCGCCACAAAGAAGAAGAACACGAAGCCCTGCCAGTGCACGAGCTGATTGAGAAGGCAGATGGCTTTGCTGGTGTCTTCCCCGAACATAAGTATGAAATTGTAAAGATCTTACAAGAAAAAAAGCATGTCGTTGGAATGACTGGAGATGGTGTTAACGACGCACCTGCTTTAAAGAAAGCAGACATTGGTATAGCAGTGGCAGATTCCACAGATGCTGCAAGAAGTGCTTCTGATATAGTCTTAACTGAACCTGGCTTAAGTGTCATTGTCAGTGCTGTTCTGACCAGTCGAGCTATATTCCAGAGAATGAAGAATTATACAATATATGCTGTTTCCATTACCATAAGGATTGTGCTTGGTTTCGTGCTTCTTGCGTTGATATGGGAGTATGACTTCCCACCTTTCATGGTTCTAATTGTAGCAATACTGAATGATGGGACCATCATGACAATTTCCCAAGATCGGGTAAAGCCCTCTCCACATCCTGACAGTTGGAAGTTGAATGAGATATTTGCAACTGGGATTGTCATTGGTACATATCAAGCTTTGGTTACTGTGTTCTTCTACTGGATTGTAATTGAGACCACCTTCTTTGAGGACACCTTCGGCTTAAAGTCTATATCCGACAACAGTGAGGAAGTTTCATCTGCTGTATATCTGCAAGTTAGTATCATAAGTCAAGCTCTCATCTTTGTTACACGAAGTCAAGGATGGTCATTTCTTGAGAGACCTGGAACTCTCTTGATGATTGCATTTGTTGTGGCACAACTGGTGGCTACTGTGATTGCCGTCTATGCAGAAATCAGCTTTGCCTACATTAGCGGCATTGGATGGGGATGGGCTGGAGTCATATGGTTGTATAGTTTGATTTTCTACTTTCCCTTGGACATCATCAAATTCGCAGTTCGCTATGGCTTGAGTGGAGATGCCTGGAATCTATTGTTTGATAGAAAGACAGCTTTTACTTCTAAGAAAGATTATGGGAAGGAAGACAGGGCAGCTAAGTGGGTACTTTCTCAGAGAAGTTTACAAGGATTGCATGACATGGAGTTCAAGGCAAGTACCAGTAGCCCCAGAAACACTACTTGGATAGCTGAACAGGCCAGACGGCGCGCTGAAATAGCCAGGTTGGGAGAGCTACACACTATGAAAGGACATGTAGAATCTGTAATGAGGCTAAAAAATTTGGACCCGAACCTTGTTTCCGCCCATACAGTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000325 GO:0003006 GO:0003674 GO:0003824 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0005911 GO:0006725 GO:0006810 GO:0006811 GO:0006812 GO:0006873 GO:0006885 GO:0006996 GO:0007033 GO:0007035 GO:0007275 GO:0008150 GO:0008152 GO:0008324 GO:0008553 GO:0009058 GO:0009506 GO:0009507 GO:0009536 GO:0009698 GO:0009699 GO:0009705 GO:0009791 GO:0009987 GO:0010023 GO:0010154 GO:0010214 GO:0015075 GO:0015077 GO:0015078 GO:0015318 GO:0015399 GO:0015405 GO:0015662 GO:0015672 GO:0016020 GO:0016043 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0017144 GO:0018130 GO:0018958 GO:0019438 GO:0019725 GO:0019748 GO:0019829 GO:0022414 GO:0022804 GO:0022853 GO:0022857 GO:0022890 GO:0030003 GO:0030004 GO:0030054 GO:0030641 GO:0031090 GO:0032501 GO:0032502 GO:0034220 GO:0036442 GO:0042592 GO:0042623 GO:0042625 GO:0042626 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043492 GO:0044237 GO:0044249 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0044550 GO:0045851 GO:0046189 GO:0046483 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0048878 GO:0050801 GO:0051179 GO:0051234 GO:0051452 GO:0051453 GO:0055044 GO:0055067 GO:0055080 GO:0055082 GO:0055085 GO:0061458 GO:0065007 GO:0065008 GO:0071704 GO:0071840 GO:0090662 GO:0098588 GO:0098655 GO:0098660 GO:0098662 GO:0098771 GO:0098805 GO:0099131 GO:0099132 GO:1901360 GO:1901362 GO:1901576 GO:1901615 GO:1901617 GO:1902600
KEGG Pathways
Metabolic & Signaling
ko00190 map00190
Pfam Domains
Protein Families
Cation_ATPase_N E1-E2_ATPase Hydrolase

Protein Analysis

954

Amino Acids

105.01

Weight (kDa)

5.34

Isoelectric Point (pI)

35.92

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Cation_ATPase_N PF00690 24 - 87 1.2e-14 Cation transporter/ATPase, N-terminus
E1-E2_ATPase PF00122 136 - 235 1.8e-30 P-type ATPase actuator domain
Hydrolase PF00702 331 - 608 3.2e-13 haloacid dehalogenase-like hydrolase
Cation_ATPase PF13246 380 - 499 2.2e-07 P-type ATPase, cytoplasmic domain N
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0014890)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G17260
fragaria_vesca FvH4_6g36241
malus_domestica MD09G1171300.v1.1 MD17G1155800.v1.1
prunus_persica Prupe.3G029800_v2.0.a1 Prupe.3G029800_v2.0.a1
pyrus_communis pycom09g08870 pycom17g14850
rosa_chinensis RchiOBHm_Chr2g0148211
rosa_laevigata RLG00000020327
rosa_multiflora Rmu_sc0002583.1_g000001
rosa_roxburghii Rroxscaffold_2G00098990
rosa_rugosa Rorug02G0404500
rosa_samantha Rh2BG476300 Rh2CG449900
rosa_wichuraiana Rw2G037760

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1813
Acc36I ACCTGC 3 cut(s) 449, 727, 1813
AccB1I GGYRCC 1 cut(s) 947
AccI GTMKAC 1 cut(s) 526
AccII CGCG 1 cut(s) 2754
AccIII TCCGGA 1 cut(s) 1300
AciI CCGC 6 cut(s) 595, 986, 1390, 1642, 2463, 2847
AclI AACGTT 1 cut(s) 826
AclWI GGATC 4 cut(s) 26, 39, 1169, 1478
AcsI RAATTY 7 cut(s) 40, 194, 757, 876, 1370, 2537, 2824
AcuI CTGAAG 3 cut(s) 27, 159, 735
AfaI GTAC 5 cut(s) 1243, 1353, 2176, 2652, 2704
AfeI AGCGCT 1 cut(s) 1524
AfiI CCNNNNNNNGG 4 cut(s) 234, 1063, 2103, 2104
AflII CTTAAG 1 cut(s) 1897
AflIII ACRYGT 3 cut(s) 626, 1614, 2797
AjnI CCWGG 8 cut(s) 78, 472, 1056, 1441, 1891, 2371, 2570, 2765
AjuI GAANNNNNNNTTGG 2 cut(s) 2710, 2742
AloI GAACNNNNNNTCC 2 cut(s) 2828, 2860
Alw21I GWGCWC 3 cut(s) 864, 1300, 1680
Alw44I GTGCAC 1 cut(s) 1676
AlwI GGATC 4 cut(s) 26, 39, 1169, 1478
AlwNI CAGNNNCTG 1 cut(s) 1856
Ama87I CYCGRG 1 cut(s) 497
Aor13HI TCCGGA 1 cut(s) 1300
Aor51HI AGCGCT 1 cut(s) 1524
AoxI GGCC 3 cut(s) 1284, 1639, 2742
ApaLI GTGCAC 1 cut(s) 1676
ApeKI GCWGC 9 cut(s) 248, 251, 383, 692, 1109, 1118, 1151, 1856, 2639
ApoI RAATTY 7 cut(s) 40, 194, 757, 876, 1370, 2537, 2824
AseI ATTAAT 1 cut(s) 332
Asp700I GAANNNNTTC 2 cut(s) 1308, 1867
AspLEI GCGC 3 cut(s) 1525, 2754, 2756
AspS9I GGNCC 7 cut(s) 293, 739, 1284, 1448, 1639, 2079, 2830
AsuHPI GGTGA 4 cut(s) 299, 580, 614, 1150
AvaI CYCGRG 1 cut(s) 497
AvaII GGWCC 5 cut(s) 293, 739, 1448, 2079, 2830
BaeGI GKGCMC 1 cut(s) 1680
BamHI GGATCC 1 cut(s) 31
BanI GGYRCC 1 cut(s) 947
BanII GRGCYC 1 cut(s) 1300
BauI CACGAG 2 cut(s) 1188, 1679
BbsI GAAGAC 3 cut(s) 188, 1708, 2637
Bbv12I GWGCWC 3 cut(s) 864, 1300, 1680
BbvI GCAGC 9 cut(s) 235, 263, 370, 704, 1121, 1130, 1163, 1843, 2651
BceAI ACGGC 3 cut(s) 764, 2414, 2765
BcgI CGANNNNNNTGC 4 cut(s) 478, 512, 1787, 1821
BciT130I CCWGG 8 cut(s) 80, 474, 1058, 1443, 1893, 2373, 2572, 2767
BciVI GTATCC 1 cut(s) 1629
BfaI CTAG 2 cut(s) 114, 1313
BfmI CTRYAG 3 cut(s) 249, 651, 774
BfoI RGCGCY 1 cut(s) 1526
BfrI CTTAAG 1 cut(s) 1897
BfuAI ACCTGC 3 cut(s) 449, 727, 1813
BfuI GTATCC 1 cut(s) 1629
BglII AGATCT 3 cut(s) 10, 1315, 1746
Bme1390I CCNGG 8 cut(s) 80, 474, 1058, 1443, 1893, 2373, 2572, 2767
Bme18I GGWCC 5 cut(s) 293, 739, 1448, 2079, 2830
BmeT110I CYCGRG 1 cut(s) 497
BmgT120I GGNCC 7 cut(s) 293, 739, 1284, 1448, 1639, 2079, 2830
BmiI GGNNCC 7 cut(s) 33, 224, 294, 949, 1449, 2080, 2832
BmrFI CCNGG 8 cut(s) 80, 474, 1058, 1443, 1893, 2373, 2572, 2767
BmrI ACTGGG 1 cut(s) 2169
BmsI GCATC 8 cut(s) 124, 395, 445, 508, 637, 1138, 1843, 2557
BmuI ACTGGG 1 cut(s) 2169
BpiI GAAGAC 3 cut(s) 188, 1708, 2637
BpmI CTGGAG 2 cut(s) 1803, 2505
BpuEI CTTGAG 2 cut(s) 2384, 2578
BsaI GGTCTC 6 cut(s) 531, 1083, 1398, 1502, 2216, 2362
BsaJI CCNNGG 7 cut(s) 78, 780, 1442, 1451, 1490, 1531, 2523
BsaWI WCCGGW 2 cut(s) 665, 1300
BsaXI ACNNNNNCTCC 4 cut(s) 1527, 1557, 1776, 1806
Bsc4I CCNNNNNNNGG 4 cut(s) 234, 1063, 2103, 2104
BseAI TCCGGA 1 cut(s) 1300
BseBI CCWGG 8 cut(s) 80, 474, 1058, 1443, 1893, 2373, 2572, 2767
BseDI CCNNGG 7 cut(s) 78, 780, 1442, 1451, 1490, 1531, 2523
BseGI GGATG 7 cut(s) 844, 969, 1000, 2122, 2357, 2477, 2483
BseLI CCNNNNNNNGG 4 cut(s) 234, 1063, 2103, 2104
BseMII CTCAG 6 cut(s) 27, 92, 442, 1317, 1497, 2672
BsePI GCGCGC 1 cut(s) 2752
BseRI GAGGAG 1 cut(s) 377
BseSI GKGCMC 1 cut(s) 1680
BseXI GCAGC 9 cut(s) 235, 263, 370, 704, 1121, 1130, 1163, 1843, 2651
Bsh1236I CGCG 1 cut(s) 2754
BshFI GGCC 3 cut(s) 1286, 1641, 2744
BshNI GGYRCC 1 cut(s) 947
BsiHKAI GWGCWC 3 cut(s) 864, 1300, 1680
BsiHKCI CYCGRG 1 cut(s) 497
BsiSI CCGG 3 cut(s) 375, 666, 1301
BslFI GGGAC 2 cut(s) 738, 2092
BslI CCNNNNNNNGG 4 cut(s) 234, 1063, 2103, 2104
BsmBI CGTCTC 1 cut(s) 1585
BsmFI GGGAC 2 cut(s) 738, 2092
BsnI GGCC 3 cut(s) 1286, 1641, 2744
Bso31I GGTCTC 6 cut(s) 531, 1083, 1398, 1502, 2216, 2362
BsoBI CYCGRG 1 cut(s) 497
Bsp1286I GDGCHC 3 cut(s) 864, 1300, 1680
Bsp13I TCCGGA 1 cut(s) 1300
Bsp143I GATC 8 cut(s) 10, 31, 1098, 1174, 1315, 1483, 1746, 2101
BspACI CCGC 6 cut(s) 595, 986, 1390, 1642, 2463, 2847
BspANI GGCC 3 cut(s) 1286, 1641, 2744
BspCNI CTCAG 6 cut(s) 28, 93, 441, 1318, 1498, 2671
BspEI TCCGGA 1 cut(s) 1300
BspFNI CGCG 1 cut(s) 2754
BspHI TCATGA 1 cut(s) 2085
BspLI GGNNCC 7 cut(s) 33, 224, 294, 949, 1449, 2080, 2832
BspMAI CTGCAG 1 cut(s) 253
BspMI ACCTGC 3 cut(s) 449, 727, 1813
BspPI GGATC 4 cut(s) 26, 39, 1169, 1478
BspT107I GGYRCC 1 cut(s) 947
BspTI CTTAAG 1 cut(s) 1897
BspTNI GGTCTC 6 cut(s) 531, 1083, 1398, 1502, 2216, 2362
BssECI CCNNGG 7 cut(s) 78, 780, 1442, 1451, 1490, 1531, 2523
BssHII GCGCGC 1 cut(s) 2752
BssMI GATC 8 cut(s) 10, 31, 1098, 1174, 1315, 1483, 1746, 2101
BssSI CACGAG 2 cut(s) 1188, 1679
BssT1I CCWWGG 4 cut(s) 1451, 1490, 1531, 2523
Bst2BI CACGAG 2 cut(s) 1188, 1679
Bst2UI CCWGG 8 cut(s) 80, 474, 1058, 1443, 1893, 2373, 2572, 2767
Bst4CI ACNGT 9 cut(s) 898, 1045, 1076, 1502, 2132, 2197, 2273, 2422, 2857
Bst6I CTCTTC 3 cut(s) 171, 1342, 1633
BstAFI CTTAAG 1 cut(s) 1897
BstAPI GCANNNNNTGC 3 cut(s) 1148, 1216, 1865
BstC8I GCNNGC 4 cut(s) 74, 1170, 1288, 2754
BstDEI CTNAG 9 cut(s) 36, 101, 209, 428, 1326, 1506, 2610, 2643, 2658
BstDSI CCRYGG 1 cut(s) 780
BstENI CCTNNNNNAGG 1 cut(s) 1061
BstF5I GGATG 7 cut(s) 844, 969, 1000, 2122, 2357, 2477, 2483
BstFNI CGCG 1 cut(s) 2754
BstH2I RGCGCY 1 cut(s) 1526
BstHHI GCGC 3 cut(s) 1525, 2754, 2756
BstKTI GATC 8 cut(s) 13, 34, 1101, 1177, 1318, 1486, 1749, 2104
BstMBI GATC 8 cut(s) 10, 31, 1098, 1174, 1315, 1483, 1746, 2101
BstNI CCWGG 8 cut(s) 80, 474, 1058, 1443, 1893, 2373, 2572, 2767
BstNSI RCATGY 4 cut(s) 630, 1618, 1769, 2801
BstSCI CCNGG 8 cut(s) 78, 472, 1056, 1441, 1891, 2371, 2570, 2765
BstSFI CTRYAG 3 cut(s) 249, 651, 774
BstSLI GKGCMC 1 cut(s) 1680
BstUI CGCG 1 cut(s) 2754
BstV1I GCAGC 9 cut(s) 235, 263, 370, 704, 1121, 1130, 1163, 1843, 2651
BstV2I GAAGAC 3 cut(s) 188, 1708, 2637
BstX2I RGATCY 4 cut(s) 10, 31, 1315, 1746
BstYI RGATCY 4 cut(s) 10, 31, 1315, 1746
BsuI GTATCC 1 cut(s) 1629
BsuRI GGCC 3 cut(s) 1286, 1641, 2744
BtgI CCRYGG 1 cut(s) 780
BtsCI GGATG 7 cut(s) 844, 969, 1000, 2122, 2357, 2477, 2483
BtsI GCAGTG 2 cut(s) 446, 1842
BveI ACCTGC 3 cut(s) 449, 727, 1813
Cac8I GCNNGC 4 cut(s) 74, 1170, 1288, 2754
CaiI CAGNNNCTG 1 cut(s) 1856
CciI TCATGA 1 cut(s) 2085
CfoI GCGC 3 cut(s) 1525, 2754, 2756
Cfr13I GGNCC 7 cut(s) 293, 739, 1284, 1448, 1639, 2079, 2830
CseI GACGC 2 cut(s) 1148, 1808
CsiI ACCWGGT 1 cut(s) 1056
Csp6I GTAC 5 cut(s) 1242, 1352, 2175, 2651, 2703
CspCI CAANNNNNGTGG 2 cut(s) 2215, 2250
CviQI GTAC 5 cut(s) 1242, 1352, 2175, 2651, 2703
DdeI CTNAG 9 cut(s) 36, 101, 209, 428, 1326, 1506, 2610, 2643, 2658
DpnI GATC 8 cut(s) 12, 33, 1100, 1176, 1317, 1485, 1748, 2103
DpnII GATC 8 cut(s) 10, 31, 1098, 1174, 1315, 1483, 1746, 2101
DraI TTTAAA 1 cut(s) 1812
Eam1104I CTCTTC 3 cut(s) 171, 1342, 1633
EarI CTCTTC 3 cut(s) 171, 1342, 1633
EciI GGCGGA 1 cut(s) 2836
Ecl136II GAGCTC 1 cut(s) 1298
Eco130I CCWWGG 4 cut(s) 1451, 1490, 1531, 2523
Eco24I GRGCYC 1 cut(s) 1300
Eco31I GGTCTC 6 cut(s) 531, 1083, 1398, 1502, 2216, 2362
Eco47I GGWCC 5 cut(s) 293, 739, 1448, 2079, 2830
Eco47III AGCGCT 1 cut(s) 1524
Eco53kI GAGCTC 1 cut(s) 1298
Eco57I CTGAAG 3 cut(s) 27, 159, 735
Eco88I CYCGRG 1 cut(s) 497
EcoICRI GAGCTC 1 cut(s) 1298
EcoNI CCTNNNNNAGG 1 cut(s) 1061
EcoO109I RGGNCCY 3 cut(s) 293, 739, 1448
EcoRI GAATTC 1 cut(s) 876
EcoRII CCWGG 8 cut(s) 78, 472, 1056, 1441, 1891, 2371, 2570, 2765
EcoT14I CCWWGG 4 cut(s) 1451, 1490, 1531, 2523
EcoT38I GRGCYC 1 cut(s) 1300
ErhI CCWWGG 4 cut(s) 1451, 1490, 1531, 2523
Esp3I CGTCTC 1 cut(s) 1585
FalI AAGNNNNNCTT 2 cut(s) 1852, 1884
FaqI GGGAC 2 cut(s) 738, 2092
FauI CCCGC 1 cut(s) 979
FauNDI CATATG 1 cut(s) 2492
FblI GTMKAC 1 cut(s) 526
FokI GGATG 7 cut(s) 851, 976, 1007, 2109, 2364, 2484, 2490
FriOI GRGCYC 1 cut(s) 1300
FspBI CTAG 2 cut(s) 114, 1313
GlaI GCGC 3 cut(s) 1524, 2753, 2755
GsuI CTGGAG 2 cut(s) 1803, 2505
HaeII RGCGCY 1 cut(s) 1526
HaeIII GGCC 3 cut(s) 1286, 1641, 2744
HapII CCGG 3 cut(s) 375, 666, 1301
HgaI GACGC 2 cut(s) 1148, 1808
HhaI GCGC 3 cut(s) 1525, 2754, 2756
Hin6I GCGC 3 cut(s) 1523, 2752, 2754
HinP1I GCGC 3 cut(s) 1523, 2752, 2754
HincII GTYRAC 2 cut(s) 706, 1795
HindII GTYRAC 2 cut(s) 706, 1795
HindIII AAGCTT 2 cut(s) 170, 2184
HpaI GTTAAC 1 cut(s) 1795
HpaII CCGG 3 cut(s) 375, 666, 1301
HphI GGTGA 4 cut(s) 299, 580, 614, 1150
Hpy166II GTNNAC 7 cut(s) 527, 673, 706, 1234, 1678, 1795, 2669
Hpy188I TCNGA 8 cut(s) 130, 431, 546, 1267, 1873, 1923, 2266, 2661
Hpy8I GTNNAC 7 cut(s) 527, 673, 706, 1234, 1678, 1795, 2669
Hpy99I CGWCG 1 cut(s) 1802
HpyAV CCTTC 9 cut(s) 527, 863, 1231, 1573, 1632, 1687, 2239, 2254, 2620
HpyCH4III ACNGT 9 cut(s) 898, 1045, 1076, 1502, 2132, 2197, 2273, 2422, 2857
HpyCH4IV ACGT 2 cut(s) 826, 1457
HpyF3I CTNAG 9 cut(s) 36, 101, 209, 428, 1326, 1506, 2610, 2643, 2658
HpySE526I ACGT 2 cut(s) 826, 1457
HspAI GCGC 3 cut(s) 1523, 2752, 2754
Kpn2I TCCGGA 1 cut(s) 1300
KspAI GTTAAC 1 cut(s) 1795
Kzo9I GATC 8 cut(s) 10, 31, 1098, 1174, 1315, 1483, 1746, 2101
LmnI GCTCC 4 cut(s) 415, 867, 1295, 1303
Lsp1109I GCAGC 9 cut(s) 235, 263, 370, 704, 1121, 1130, 1163, 1843, 2651
LweI GCATC 8 cut(s) 124, 395, 445, 508, 637, 1138, 1843, 2557
MabI ACCWGGT 1 cut(s) 1056
MaeI CTAG 2 cut(s) 114, 1313
MaeII ACGT 2 cut(s) 826, 1457
MaeIII GTNAC 6 cut(s) 586, 718, 907, 1007, 2191, 2335
MalI GATC 8 cut(s) 12, 33, 1100, 1176, 1317, 1485, 1748, 2103
MboI GATC 8 cut(s) 10, 31, 1098, 1174, 1315, 1483, 1746, 2101
MfeI CAATTG 4 cut(s) 882, 918, 1143, 1572
MflI RGATCY 4 cut(s) 10, 31, 1315, 1746
MhlI GDGCHC 3 cut(s) 864, 1300, 1680
MlyI GAGTC 5 cut(s) 584, 701, 1256, 1545, 2496
MmeI TCCRAC 4 cut(s) 9, 1753, 2114, 2289
MroI TCCGGA 1 cut(s) 1300
MroXI GAANNNNTTC 2 cut(s) 1308, 1867
MseI TTAA 7 cut(s) 332, 1071, 1794, 1811, 1883, 1898, 2252
MslI CAYNNNNRTG 4 cut(s) 806, 1163, 1500, 1731
MspA1I CMGCKG 1 cut(s) 515
MspCI CTTAAG 1 cut(s) 1897
MspI CCGG 3 cut(s) 375, 666, 1301
MspR9I CCNGG 8 cut(s) 80, 474, 1058, 1443, 1893, 2373, 2572, 2767
MunI CAATTG 4 cut(s) 882, 918, 1143, 1572
MvaI CCWGG 8 cut(s) 80, 474, 1058, 1443, 1893, 2373, 2572, 2767
MvnI CGCG 1 cut(s) 2754
NdeI CATATG 1 cut(s) 2492
NdeII GATC 8 cut(s) 10, 31, 1098, 1174, 1315, 1483, 1746, 2101
NlaIV GGNNCC 7 cut(s) 33, 224, 294, 949, 1449, 2080, 2832
NmuCI GTSAC 3 cut(s) 586, 907, 1007
NspI RCATGY 4 cut(s) 630, 1618, 1769, 2801
PagI TCATGA 1 cut(s) 2085
PaqCI CACCTGC 1 cut(s) 1813
PauI GCGCGC 1 cut(s) 2752
PciI ACATGT 3 cut(s) 626, 1614, 2797
PdmI GAANNNNTTC 2 cut(s) 1308, 1867
PfeI GAWTC 7 cut(s) 843, 1033, 1132, 1309, 1844, 2575, 2804
PleI GAGTC 5 cut(s) 583, 701, 1256, 1544, 2495
PpsI GAGTC 5 cut(s) 583, 701, 1256, 1544, 2495
PpuMI RGGWCCY 3 cut(s) 293, 739, 1448
PscI ACATGT 3 cut(s) 626, 1614, 2797
PshBI ATTAAT 1 cut(s) 332
Psp124BI GAGCTC 1 cut(s) 1300
Psp1406I AACGTT 1 cut(s) 826
Psp5II RGGWCCY 3 cut(s) 293, 739, 1448
Psp6I CCWGG 8 cut(s) 78, 472, 1056, 1441, 1891, 2371, 2570, 2765
PspGI CCWGG 8 cut(s) 78, 472, 1056, 1441, 1891, 2371, 2570, 2765
PspN4I GGNNCC 7 cut(s) 33, 224, 294, 949, 1449, 2080, 2832
PspPI GGNCC 7 cut(s) 293, 739, 1284, 1448, 1639, 2079, 2830
PspPPI RGGWCCY 3 cut(s) 293, 739, 1448
PstI CTGCAG 1 cut(s) 253
PstNI CAGNNNCTG 1 cut(s) 1856
PsuI RGATCY 4 cut(s) 10, 31, 1315, 1746
PteI GCGCGC 1 cut(s) 2752
PvuII CAGCTG 1 cut(s) 515
RsaI GTAC 5 cut(s) 1243, 1353, 2176, 2652, 2704
RsaNI GTAC 5 cut(s) 1242, 1352, 2175, 2651, 2703
RseI CAYNNNNRTG 4 cut(s) 806, 1163, 1500, 1731
SacI GAGCTC 1 cut(s) 1300
SaqAI TTAA 7 cut(s) 332, 1071, 1794, 1811, 1883, 1898, 2252
Sau3AI GATC 8 cut(s) 10, 31, 1098, 1174, 1315, 1483, 1746, 2101
Sau96I GGNCC 7 cut(s) 293, 739, 1284, 1448, 1639, 2079, 2830
SchI GAGTC 5 cut(s) 584, 701, 1256, 1545, 2496
ScrFI CCNGG 8 cut(s) 80, 474, 1058, 1443, 1893, 2373, 2572, 2767
SduI GDGCHC 3 cut(s) 864, 1300, 1680
SexAI ACCWGGT 1 cut(s) 1056
SfaNI GCATC 8 cut(s) 124, 395, 445, 508, 637, 1138, 1843, 2557
SfcI CTRYAG 3 cut(s) 249, 651, 774
SinI GGWCC 5 cut(s) 293, 739, 1448, 2079, 2830
SmiMI CAYNNNNRTG 4 cut(s) 806, 1163, 1500, 1731
SmlI CTYRAG 3 cut(s) 1897, 2363, 2557
SmoI CTYRAG 3 cut(s) 1897, 2363, 2557
SsiI CCGC 6 cut(s) 595, 986, 1390, 1642, 2463, 2847
SspI AATATT 1 cut(s) 1198
SspMI CTAG 2 cut(s) 114, 1313
SstI GAGCTC 1 cut(s) 1300
StyD4I CCNGG 8 cut(s) 78, 472, 1056, 1441, 1891, 2371, 2570, 2765
StyI CCWWGG 4 cut(s) 1451, 1490, 1531, 2523
TaaI ACNGT 9 cut(s) 898, 1045, 1076, 1502, 2132, 2197, 2273, 2422, 2857
TaiI ACGT 2 cut(s) 829, 1460
TaqI TCGA 5 cut(s) 360, 931, 975, 1260, 1930
TatI WGTACW 1 cut(s) 1351
TauI GCSGC 2 cut(s) 1644, 2466
TfiI GAWTC 7 cut(s) 843, 1033, 1132, 1309, 1844, 2575, 2804
Tru1I TTAA 7 cut(s) 332, 1071, 1794, 1811, 1883, 1898, 2252
Tru9I TTAA 7 cut(s) 332, 1071, 1794, 1811, 1883, 1898, 2252
TseFI GTSAC 3 cut(s) 586, 907, 1007
TseI GCWGC 9 cut(s) 248, 251, 383, 692, 1109, 1118, 1151, 1856, 2639
Tsp45I GTSAC 3 cut(s) 586, 907, 1007
TspDTI ATGAA 7 cut(s) 621, 1620, 1749, 1964, 2035, 2274, 2804
Vha464I CTTAAG 1 cut(s) 1897
VneI GTGCAC 1 cut(s) 1676
VpaK11BI GGWCC 5 cut(s) 293, 739, 1448, 2079, 2830
VspI ATTAAT 1 cut(s) 332
XagI CCTNNNNNAGG 1 cut(s) 1061
XapI RAATTY 7 cut(s) 40, 194, 757, 876, 1370, 2537, 2824
XbaI TCTAGA 1 cut(s) 1312
XceI RCATGY 4 cut(s) 630, 1618, 1769, 2801
XmiI GTMKAC 1 cut(s) 526
XmnI GAANNNNTTC 2 cut(s) 1308, 1867
XspI CTAG 2 cut(s) 114, 1313
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.