Rh2BG476300

ATPase 10, plasma

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2B
OG0014890
Physical Location & Seq
Reverse (-)
67131992 .. 67140033
8042 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2BG476300.1

Sequence Viewer

Length: 2244 bp
ATGGCTGAAGATCTGGACAAACCGTTGTTGGATCCTGAGAATTTCAATAGAGATGGCATCGATTTGGAACGCTTACCCCTGGAAGAAGTTTTTGAACAACTGAGAACATCAGCGAGAGGACTTTCATCCGATGATGCTGAAGCCAGATTGCACATTTTTGGCTACAACAAACTTGAAGAGAAGACAGAGAACAAAATTTTGAAGTTTCTTAGCTTTATGTGGAACCCCTTGTCATGGGTTATGGAAGCTGCAGCAGTTATGGCACTTGTCCTTGCTAATGGGGGAGGTGAGGGTCCTGACTGGCAAGACTTTGTTGGGATTATTGTCCTATTAATAATCAATTCAACAATTAGTTTCATAGAGGAGAATAATGCGGGAAATGCTGCATCAGCTCTTATGGAACGTTTATCTCCAAAGACAAGGGTTCTCAGAGATGGGCAGTGGCAAGAGCAAGATGCAGGTATTTTAGTGCCAGGAGACATAATTAGCATAAAGCTCGGGGATATAATTCCAGCTGATGCTCGTCTACTTGAAGGAGACCCTCTGAAAGTTGATCAGTCGGCTCTTACAGGAGAGTCTCTGGCTGTCACCAAGAGGACAGGTGATGAAGTATTTTCTGGTTCAACATGTAAGCATGGAGAAATTGAAGCTGTAGTGATAGCAACCGGAGTTCACTCATTTTTTGGAAAAGCAGCACATTTAGTCGACACCACTGAAGTTGTGGGACATTTCCAGCAGGTCCTTACTGCCATTGGGAATTTCTGCATTTGCTCTATAGCTGTGGGAATGGTTCTTGAAATCATTGTCATGTTCCCCATACAGCAACGTTCTTACAGGGATGGAATCAACAACCTTCTTGTTCTCTTAATTGGAGGAATTCCAATTGCTATGCCAACAGTGTTATCTGTGACACTTGCAATTGGTTCTCATCGACTATCTCAACAGGGTGCTATTACAAAAAGGATGACAGCAATTGAAGAAATGGCGGGAATGGATGTCCTTTGTAGTGACAAAACTGGAACTCTTACCCTGAACCGCCTCACTGTTGATAAAAACCTGGTTGAGGTTTTTAACAATAATATAGACAGAGACACAGTTATCTTATTTGCAGCCAGAGCAGCAAGACTGGAGAATCAAGACGCAATTGATGCAGCCATTACCAATATGCTTGGTGATCCAAAGGAGGCACGTGCAAATATTACCGAAGTGCATTTTCTGCCCTTCAATCCAGTGGACAAGCGTACTGCCATTACATACATCGACTCTGATGGTAATTGGTATAGGGCCAGCAAAGGAGCTCCAGAACAGATTCTAGATCTTTGCCCTGAGAAAAATGAGATTGCTGGAAGAGTACATAGCACCATTGACAAATTTGCTGAAAGAGGCTTGCGGTCTCTTGGAGTTGCTTATCAGGAAGTTCCAGAAAAAACTAAAGAAAGCCCTGGCGGTCCTTGGACCTTTTGTGGGTTGTTGCCCTTGTTTGATCCTCCAAGGCATGACAGTGCTGAGACCATTCGTAGAGCACTTAACCTTGGAGTCGCTGTGAAGATGATTACAGGTGACCAGTTGGCAATTGCGAAGGAGACAGGGAGACGGCTTGGTATGGGAACAAACATGTATCCTTCCTCTTCATTATTGGGCCGCAAAAAAGAAGAAGATCACGAAGCCGTGCCAGTGGACGAGCTGATTGAGAAAGCAGATGGCTTTGCTGGTGTCTTCCCTGAACACAAGTATGAAATTGTAAAAATCTTACAAGAAAAGAAGCATGTCGTTGGAATGACTGGAGATGGTGTTAACGATGCACCTGCTTTAAAGAAAGCAGACATTGGTATAGCAGTGGCAGATTCCACAGATGCTGCGAGAAGTGCTTCTGATATAGTCTTAACGGAACCTGGCTTAAGTGTCATTGTCAGTGCTGTCCTGACCAGTCGAGCTATATTCCAGAGAATGAAGAATTATACTATATATGCTGTTTCCATTACCATTAGGATTGTGCTTGGTTTCGTGCTTCTTGCATTGATATGGGAGTATGATTTCCCACCTTTCATGGTTCTGATTATAGCAATACTGAATGATGGGACCATCATGACAATTTCCCAAGATCGGGTAAAGCCCTCTCCAAGGCCTGACAGTTGGAAGTTGAATGAGATATTTGCAACTGGCATTGTCATTGGTACATATCTAGCTTTGGTTACTGTGTTATTTTACTGGACTGTCATCGAGACCACCTTCTTTGAGGTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000325 GO:0003006 GO:0003674 GO:0003824 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0005911 GO:0006725 GO:0006810 GO:0006811 GO:0006812 GO:0006873 GO:0006885 GO:0006996 GO:0007033 GO:0007035 GO:0007275 GO:0008150 GO:0008152 GO:0008324 GO:0008553 GO:0009058 GO:0009506 GO:0009507 GO:0009536 GO:0009698 GO:0009699 GO:0009705 GO:0009791 GO:0009987 GO:0010023 GO:0010154 GO:0010214 GO:0015075 GO:0015077 GO:0015078 GO:0015318 GO:0015399 GO:0015405 GO:0015662 GO:0015672 GO:0016020 GO:0016043 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0017144 GO:0018130 GO:0018958 GO:0019438 GO:0019725 GO:0019748 GO:0019829 GO:0022414 GO:0022804 GO:0022853 GO:0022857 GO:0022890 GO:0030003 GO:0030004 GO:0030054 GO:0030641 GO:0031090 GO:0032501 GO:0032502 GO:0034220 GO:0036442 GO:0042592 GO:0042623 GO:0042625 GO:0042626 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043492 GO:0044237 GO:0044249 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0044550 GO:0045851 GO:0046189 GO:0046483 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0048878 GO:0050801 GO:0051179 GO:0051234 GO:0051452 GO:0051453 GO:0055044 GO:0055067 GO:0055080 GO:0055082 GO:0055085 GO:0061458 GO:0065007 GO:0065008 GO:0071704 GO:0071840 GO:0090662 GO:0098588 GO:0098655 GO:0098660 GO:0098662 GO:0098771 GO:0098805 GO:0099131 GO:0099132 GO:1901360 GO:1901362 GO:1901576 GO:1901615 GO:1901617 GO:1902600
KEGG Pathways
Metabolic & Signaling
ko00190 map00190
Pfam Domains
Protein Families
Cation_ATPase_N E1-E2_ATPase Hydrolase

Protein Analysis

747

Amino Acids

81.79

Weight (kDa)

4.97

Isoelectric Point (pI)

35.34

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Cation_ATPase_N PF00690 24 - 87 9.2e-15 Cation transporter/ATPase, N-terminus
E1-E2_ATPase PF00122 136 - 235 1.9e-30 P-type ATPase actuator domain
Hydrolase PF00702 331 - 608 1.8e-13 haloacid dehalogenase-like hydrolase
Cation_ATPase PF13246 381 - 499 2.3e-07 P-type ATPase, cytoplasmic domain N
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0014890)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G17260
fragaria_vesca FvH4_6g36241
malus_domestica MD09G1171300.v1.1 MD17G1155800.v1.1
prunus_persica Prupe.3G029800_v2.0.a1 Prupe.3G029800_v2.0.a1
pyrus_communis pycom09g08870 pycom17g14850
rosa_chinensis RchiOBHm_Chr2g0148211
rosa_laevigata RLG00000020327
rosa_multiflora Rmu_sc0002583.1_g000001
rosa_roxburghii Rroxscaffold_2G00098990
rosa_rugosa Rorug02G0404500
rosa_samantha Rh2BG476300 Rh2CG449900
rosa_wichuraiana Rw2G037760

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1813
Acc36I ACCTGC 3 cut(s) 449, 727, 1813
AccI GTMKAC 2 cut(s) 526, 705
AciI CCGC 6 cut(s) 374, 986, 1036, 1390, 1446, 1642
AclI AACGTT 2 cut(s) 403, 826
AclWI GGATC 4 cut(s) 26, 39, 1169, 1478
AcsI RAATTY 5 cut(s) 40, 195, 757, 876, 1370
AcuI CTGAAG 3 cut(s) 27, 159, 735
AcvI CACGTG 1 cut(s) 1190
AfaI GTAC 3 cut(s) 1243, 1353, 2176
AfiI CCNNNNNNNGG 6 cut(s) 234, 1063, 1464, 2103, 2104, 2121
AflII CTTAAG 1 cut(s) 1897
AflIII ACRYGT 2 cut(s) 626, 1614
AjnI CCWGG 5 cut(s) 78, 472, 1056, 1441, 1891
Alw21I GWGCWC 2 cut(s) 1300, 1525
Alw26I GTCTC 9 cut(s) 471, 531, 582, 1083, 1398, 1502, 1577, 1585, 2216
AlwI GGATC 4 cut(s) 26, 39, 1169, 1478
AlwNI CAGNNNCTG 1 cut(s) 1856
Ama87I CYCGRG 1 cut(s) 497
AoxI GGCC 3 cut(s) 1284, 1639, 2123
ApeKI GCWGC 8 cut(s) 248, 251, 383, 692, 1109, 1118, 1151, 1856
ApoI RAATTY 5 cut(s) 40, 195, 757, 876, 1370
AseI ATTAAT 1 cut(s) 332
Asp700I GAANNNNTTC 2 cut(s) 1308, 1867
AspS9I GGNCC 7 cut(s) 293, 739, 1284, 1448, 1455, 1639, 2079
AsuHPI GGTGA 5 cut(s) 299, 580, 614, 1184, 1571
AvaI CYCGRG 1 cut(s) 497
AvaII GGWCC 5 cut(s) 293, 739, 1448, 1455, 2079
BamHI GGATCC 1 cut(s) 31
BanII GRGCYC 1 cut(s) 1300
BbrPI CACGTG 1 cut(s) 1190
BbsI GAAGAC 2 cut(s) 188, 1708
Bbv12I GWGCWC 2 cut(s) 1300, 1525
BbvI GCAGC 8 cut(s) 235, 263, 370, 704, 1121, 1130, 1163, 1843
BccI CCATC 8 cut(s) 47, 428, 833, 1262, 1694, 1781, 2069, 2090
BceAI ACGGC 2 cut(s) 1610, 1652
BcgI CGANNNNNNTGC 4 cut(s) 478, 512, 1787, 1821
BciT130I CCWGG 5 cut(s) 80, 474, 1058, 1443, 1893
BciVI GTATCC 1 cut(s) 1629
BclI TGATCA 1 cut(s) 553
BcoDI GTCTC 9 cut(s) 471, 531, 582, 1083, 1398, 1502, 1577, 1585, 2216
BfaI CTAG 2 cut(s) 1313, 2183
BfmI CTRYAG 3 cut(s) 249, 651, 774
BfrI CTTAAG 1 cut(s) 1897
BfuAI ACCTGC 3 cut(s) 449, 727, 1813
BfuI GTATCC 1 cut(s) 1629
BglII AGATCT 2 cut(s) 10, 1315
BisI GCNGC 9 cut(s) 249, 252, 384, 693, 1110, 1119, 1152, 1642, 1857
BlsI GCNGC 9 cut(s) 250, 253, 385, 694, 1111, 1120, 1153, 1643, 1858
Bme1390I CCNGG 5 cut(s) 80, 474, 1058, 1443, 1893
Bme18I GGWCC 5 cut(s) 293, 739, 1448, 1455, 2079
BmeT110I CYCGRG 1 cut(s) 497
BmgT120I GGNCC 7 cut(s) 293, 739, 1284, 1448, 1455, 1639, 2079
BmiI GGNNCC 5 cut(s) 33, 224, 294, 1890, 2080
BmrFI CCNGG 5 cut(s) 80, 474, 1058, 1443, 1893
BmsI GCATC 8 cut(s) 66, 124, 395, 445, 508, 1138, 1789, 1843
BpiI GAAGAC 2 cut(s) 188, 1708
BpmI CTGGAG 3 cut(s) 1148, 1284, 1803
Bsa29I ATCGAT 1 cut(s) 60
BsaAI YACGTR 1 cut(s) 1190
BsaI GGTCTC 4 cut(s) 531, 1398, 1502, 2216
BsaJI CCNNGG 6 cut(s) 78, 1441, 1451, 1490, 1531, 2120
BsaWI WCCGGW 1 cut(s) 665
BsaXI ACNNNNNCTCC 4 cut(s) 1527, 1557, 1776, 1806
Bsc4I CCNNNNNNNGG 6 cut(s) 234, 1063, 1464, 2103, 2104, 2121
BseBI CCWGG 5 cut(s) 80, 474, 1058, 1443, 1893
BseCI ATCGAT 1 cut(s) 60
BseDI CCNNGG 6 cut(s) 78, 1441, 1451, 1490, 1531, 2120
BseGI GGATG 4 cut(s) 125, 844, 969, 1000
BseLI CCNNNNNNNGG 6 cut(s) 234, 1063, 1464, 2103, 2104, 2121
BseMII CTCAG 5 cut(s) 27, 92, 442, 1317, 1497
BseRI GAGGAG 1 cut(s) 377
BseXI GCAGC 8 cut(s) 235, 263, 370, 704, 1121, 1130, 1163, 1843
BshFI GGCC 3 cut(s) 1286, 1641, 2125
BshVI ATCGAT 1 cut(s) 60
BsiHKAI GWGCWC 2 cut(s) 1300, 1525
BsiHKCI CYCGRG 1 cut(s) 497
BsiSI CCGG 1 cut(s) 666
BslFI GGGAC 2 cut(s) 738, 2092
BslI CCNNNNNNNGG 6 cut(s) 234, 1063, 1464, 2103, 2104, 2121
BsmAI GTCTC 9 cut(s) 471, 531, 582, 1083, 1398, 1502, 1577, 1585, 2216
BsmBI CGTCTC 1 cut(s) 1585
BsmFI GGGAC 2 cut(s) 738, 2092
BsnI GGCC 3 cut(s) 1286, 1641, 2125
Bso31I GGTCTC 4 cut(s) 531, 1398, 1502, 2216
BsoBI CYCGRG 1 cut(s) 497
Bsp1286I GDGCHC 2 cut(s) 1300, 1525
Bsp143I GATC 8 cut(s) 10, 31, 553, 1174, 1315, 1483, 1657, 2101
BspACI CCGC 6 cut(s) 374, 986, 1036, 1390, 1446, 1642
BspANI GGCC 3 cut(s) 1286, 1641, 2125
BspCNI CTCAG 5 cut(s) 28, 93, 441, 1318, 1498
BspDI ATCGAT 1 cut(s) 60
BspHI TCATGA 1 cut(s) 2085
BspLI GGNNCC 5 cut(s) 33, 224, 294, 1890, 2080
BspMAI CTGCAG 1 cut(s) 253
BspMI ACCTGC 3 cut(s) 449, 727, 1813
BspPI GGATC 4 cut(s) 26, 39, 1169, 1478
BspTI CTTAAG 1 cut(s) 1897
BspTNI GGTCTC 4 cut(s) 531, 1398, 1502, 2216
BssECI CCNNGG 6 cut(s) 78, 1441, 1451, 1490, 1531, 2120
BssMI GATC 8 cut(s) 10, 31, 553, 1174, 1315, 1483, 1657, 2101
BssT1I CCWWGG 4 cut(s) 1451, 1490, 1531, 2120
Bst2UI CCWGG 5 cut(s) 80, 474, 1058, 1443, 1893
Bst4CI ACNGT 8 cut(s) 24, 898, 1045, 1096, 1502, 2132, 2197, 2215
Bst6I CTCTTC 3 cut(s) 171, 1342, 1633
BstAFI CTTAAG 1 cut(s) 1897
BstAPI GCANNNNNTGC 2 cut(s) 1148, 1216
BstBAI YACGTR 1 cut(s) 1190
BstC8I GCNNGC 2 cut(s) 1288, 1388
BstDEI CTNAG 6 cut(s) 36, 101, 209, 428, 1326, 1506
BstEII GGTNACC 1 cut(s) 1559
BstENI CCTNNNNNAGG 2 cut(s) 1061, 2119
BstF5I GGATG 4 cut(s) 125, 844, 969, 1000
BstKTI GATC 8 cut(s) 13, 34, 556, 1177, 1318, 1486, 1660, 2104
BstMAI GTCTC 9 cut(s) 471, 531, 582, 1083, 1398, 1502, 1577, 1585, 2216
BstMBI GATC 8 cut(s) 10, 31, 553, 1174, 1315, 1483, 1657, 2101
BstMWI GCNNNNNNNGC 8 cut(s) 260, 380, 389, 1115, 1118, 1148, 1216, 1865
BstNI CCWGG 5 cut(s) 80, 474, 1058, 1443, 1893
BstNSI RCATGY 3 cut(s) 630, 1618, 1769
BstPI GGTNACC 1 cut(s) 1559
BstSCI CCNGG 5 cut(s) 78, 472, 1056, 1441, 1891
BstSFI CTRYAG 3 cut(s) 249, 651, 774
BstV1I GCAGC 8 cut(s) 235, 263, 370, 704, 1121, 1130, 1163, 1843
BstV2I GAAGAC 2 cut(s) 188, 1708
BstX2I RGATCY 3 cut(s) 10, 31, 1315
BstYI RGATCY 3 cut(s) 10, 31, 1315
Bsu15I ATCGAT 1 cut(s) 60
BsuI GTATCC 1 cut(s) 1629
BsuRI GGCC 3 cut(s) 1286, 1641, 2125
BsuTUI ATCGAT 1 cut(s) 60
BtsCI GGATG 4 cut(s) 125, 844, 969, 1000
BtsI GCAGTG 2 cut(s) 446, 1842
BtsIMutI CAGTG 9 cut(s) 446, 711, 903, 1041, 1236, 1507, 1680, 1842, 1918
BveI ACCTGC 3 cut(s) 449, 727, 1813
Cac8I GCNNGC 2 cut(s) 1288, 1388
CaiI CAGNNNCTG 1 cut(s) 1856
CciI TCATGA 1 cut(s) 2085
Cfr13I GGNCC 7 cut(s) 293, 739, 1284, 1448, 1455, 1639, 2079
ClaI ATCGAT 1 cut(s) 60
CseI GACGC 1 cut(s) 1148
CsiI ACCWGGT 1 cut(s) 1056
Csp6I GTAC 3 cut(s) 1242, 1352, 2175
CspCI CAANNNNNGTGG 3 cut(s) 700, 735, 2215
CviAII CATG 9 cut(s) 234, 627, 635, 808, 1496, 1615, 1766, 2047, 2086
CviQI GTAC 3 cut(s) 1242, 1352, 2175
DdeI CTNAG 6 cut(s) 36, 101, 209, 428, 1326, 1506
DpnI GATC 8 cut(s) 12, 33, 555, 1176, 1317, 1485, 1659, 2103
DpnII GATC 8 cut(s) 10, 31, 553, 1174, 1315, 1483, 1657, 2101
DraI TTTAAA 1 cut(s) 1812
Eam1104I CTCTTC 3 cut(s) 171, 1342, 1633
EarI CTCTTC 3 cut(s) 171, 1342, 1633
Ecl136II GAGCTC 1 cut(s) 1298
Eco130I CCWWGG 4 cut(s) 1451, 1490, 1531, 2120
Eco147I AGGCCT 1 cut(s) 2125
Eco24I GRGCYC 1 cut(s) 1300
Eco31I GGTCTC 4 cut(s) 531, 1398, 1502, 2216
Eco47I GGWCC 5 cut(s) 293, 739, 1448, 1455, 2079
Eco53kI GAGCTC 1 cut(s) 1298
Eco57I CTGAAG 3 cut(s) 27, 159, 735
Eco72I CACGTG 1 cut(s) 1190
Eco88I CYCGRG 1 cut(s) 497
Eco91I GGTNACC 1 cut(s) 1559
EcoICRI GAGCTC 1 cut(s) 1298
EcoNI CCTNNNNNAGG 2 cut(s) 1061, 2119
EcoO109I RGGNCCY 2 cut(s) 293, 739
EcoO65I GGTNACC 1 cut(s) 1559
EcoRI GAATTC 1 cut(s) 876
EcoRII CCWGG 5 cut(s) 78, 472, 1056, 1441, 1891
EcoT14I CCWWGG 4 cut(s) 1451, 1490, 1531, 2120
EcoT38I GRGCYC 1 cut(s) 1300
ErhI CCWWGG 4 cut(s) 1451, 1490, 1531, 2120
Esp3I CGTCTC 1 cut(s) 1585
FaeI CATG 9 cut(s) 237, 630, 638, 811, 1499, 1618, 1769, 2050, 2089
FaqI GGGAC 2 cut(s) 738, 2092
FatI CATG 9 cut(s) 233, 626, 634, 807, 1495, 1614, 1765, 2046, 2085
FauI CCCGC 2 cut(s) 367, 979
FbaI TGATCA 1 cut(s) 553
FblI GTMKAC 2 cut(s) 526, 705
Fnu4HI GCNGC 9 cut(s) 249, 252, 384, 693, 1110, 1119, 1152, 1642, 1857
FokI GGATG 4 cut(s) 112, 851, 976, 1007
FriOI GRGCYC 1 cut(s) 1300
Fsp4HI GCNGC 9 cut(s) 249, 252, 384, 693, 1110, 1119, 1152, 1642, 1857
FspBI CTAG 2 cut(s) 1313, 2183
GluI GCNGC 9 cut(s) 249, 252, 384, 693, 1110, 1119, 1152, 1642, 1857
GsuI CTGGAG 3 cut(s) 1148, 1284, 1803
HaeIII GGCC 3 cut(s) 1286, 1641, 2125
HapII CCGG 1 cut(s) 666
HgaI GACGC 1 cut(s) 1148
Hin1II CATG 9 cut(s) 237, 630, 638, 811, 1499, 1618, 1769, 2050, 2089
HincII GTYRAC 2 cut(s) 706, 1795
HindII GTYRAC 2 cut(s) 706, 1795
HinfI GANTC 7 cut(s) 575, 843, 1132, 1262, 1309, 1536, 1844
HpaI GTTAAC 1 cut(s) 1795
HpaII CCGG 1 cut(s) 666
HphI GGTGA 5 cut(s) 299, 580, 614, 1184, 1571
Hpy166II GTNNAC 6 cut(s) 527, 673, 706, 1234, 1678, 1795
Hpy188I TCNGA 6 cut(s) 130, 431, 546, 1267, 1873, 2055
Hpy8I GTNNAC 6 cut(s) 527, 673, 706, 1234, 1678, 1795
HpyAV CCTTC 6 cut(s) 527, 863, 1231, 1573, 1632, 2239
HpyCH4III ACNGT 8 cut(s) 24, 898, 1045, 1096, 1502, 2132, 2197, 2215
HpyCH4IV ACGT 3 cut(s) 403, 826, 1189
HpyF10VI GCNNNNNNNGC 8 cut(s) 260, 380, 389, 1115, 1118, 1148, 1216, 1865
HpyF3I CTNAG 6 cut(s) 36, 101, 209, 428, 1326, 1506
HpySE526I ACGT 3 cut(s) 403, 826, 1189
Hsp92II CATG 9 cut(s) 237, 630, 638, 811, 1499, 1618, 1769, 2050, 2089
Ksp22I TGATCA 1 cut(s) 553
KspAI GTTAAC 1 cut(s) 1795
Kzo9I GATC 8 cut(s) 10, 31, 553, 1174, 1315, 1483, 1657, 2101
LmnI GCTCC 2 cut(s) 1295, 1303
Lsp1109I GCAGC 8 cut(s) 235, 263, 370, 704, 1121, 1130, 1163, 1843
LweI GCATC 8 cut(s) 66, 124, 395, 445, 508, 1138, 1789, 1843
MabI ACCWGGT 1 cut(s) 1056
MaeI CTAG 2 cut(s) 1313, 2183
MaeII ACGT 3 cut(s) 403, 826, 1189
MaeIII GTNAC 5 cut(s) 586, 907, 1007, 1559, 2191
MalI GATC 8 cut(s) 12, 33, 555, 1176, 1317, 1485, 1659, 2103
MboI GATC 8 cut(s) 10, 31, 553, 1174, 1315, 1483, 1657, 2101
MfeI CAATTG 5 cut(s) 882, 918, 972, 1143, 1572
MflI RGATCY 3 cut(s) 10, 31, 1315
MhlI GDGCHC 2 cut(s) 1300, 1525
MlyI GAGTC 3 cut(s) 584, 1256, 1545
MmeI TCCRAC 3 cut(s) 9, 1753, 2114
MroXI GAANNNNTTC 2 cut(s) 1308, 1867
MseI TTAA 8 cut(s) 332, 866, 1071, 1527, 1794, 1811, 1883, 1898
MslI CAYNNNNRTG 4 cut(s) 806, 1500, 1731, 2020
MspA1I CMGCKG 1 cut(s) 515
MspCI CTTAAG 1 cut(s) 1897
MspI CCGG 1 cut(s) 666
MspR9I CCNGG 5 cut(s) 80, 474, 1058, 1443, 1893
MunI CAATTG 5 cut(s) 882, 918, 972, 1143, 1572
MvaI CCWGG 5 cut(s) 80, 474, 1058, 1443, 1893
MwoI GCNNNNNNNGC 8 cut(s) 260, 380, 389, 1115, 1118, 1148, 1216, 1865
NdeII GATC 8 cut(s) 10, 31, 553, 1174, 1315, 1483, 1657, 2101
NlaIII CATG 9 cut(s) 237, 630, 638, 811, 1499, 1618, 1769, 2050, 2089
NlaIV GGNNCC 5 cut(s) 33, 224, 294, 1890, 2080
NmuCI GTSAC 4 cut(s) 586, 907, 1007, 1559
NspI RCATGY 3 cut(s) 630, 1618, 1769
PagI TCATGA 1 cut(s) 2085
PaqCI CACCTGC 1 cut(s) 1813
PceI AGGCCT 1 cut(s) 2125
PciI ACATGT 2 cut(s) 626, 1614
PdmI GAANNNNTTC 2 cut(s) 1308, 1867
PfeI GAWTC 4 cut(s) 843, 1132, 1309, 1844
PkrI GCNGC 9 cut(s) 250, 253, 385, 694, 1111, 1120, 1153, 1643, 1858
PleI GAGTC 3 cut(s) 583, 1256, 1544
PmaCI CACGTG 1 cut(s) 1190
PmlI CACGTG 1 cut(s) 1190
PpsI GAGTC 3 cut(s) 583, 1256, 1544
Ppu21I YACGTR 1 cut(s) 1190
PpuMI RGGWCCY 2 cut(s) 293, 739
PscI ACATGT 2 cut(s) 626, 1614
PshBI ATTAAT 1 cut(s) 332
Psp124BI GAGCTC 1 cut(s) 1300
Psp1406I AACGTT 2 cut(s) 403, 826
Psp5II RGGWCCY 2 cut(s) 293, 739
Psp6I CCWGG 5 cut(s) 78, 472, 1056, 1441, 1891
PspCI CACGTG 1 cut(s) 1190
PspEI GGTNACC 1 cut(s) 1559
PspGI CCWGG 5 cut(s) 78, 472, 1056, 1441, 1891
PspN4I GGNNCC 5 cut(s) 33, 224, 294, 1890, 2080
PspPI GGNCC 7 cut(s) 293, 739, 1284, 1448, 1455, 1639, 2079
PspPPI RGGWCCY 2 cut(s) 293, 739
PstI CTGCAG 1 cut(s) 253
PstNI CAGNNNCTG 1 cut(s) 1856
PsuI RGATCY 3 cut(s) 10, 31, 1315
PvuII CAGCTG 1 cut(s) 515
RsaI GTAC 3 cut(s) 1243, 1353, 2176
RsaNI GTAC 3 cut(s) 1242, 1352, 2175
RseI CAYNNNNRTG 4 cut(s) 806, 1500, 1731, 2020
SacI GAGCTC 1 cut(s) 1300
SalI GTCGAC 1 cut(s) 704
SaqAI TTAA 8 cut(s) 332, 866, 1071, 1527, 1794, 1811, 1883, 1898
SatI GCNGC 9 cut(s) 249, 252, 384, 693, 1110, 1119, 1152, 1642, 1857
Sau3AI GATC 8 cut(s) 10, 31, 553, 1174, 1315, 1483, 1657, 2101
Sau96I GGNCC 7 cut(s) 293, 739, 1284, 1448, 1455, 1639, 2079
SchI GAGTC 3 cut(s) 584, 1256, 1545
ScrFI CCNGG 5 cut(s) 80, 474, 1058, 1443, 1893
SduI GDGCHC 2 cut(s) 1300, 1525
SexAI ACCWGGT 1 cut(s) 1056
SfaNI GCATC 8 cut(s) 66, 124, 395, 445, 508, 1138, 1789, 1843
SfcI CTRYAG 3 cut(s) 249, 651, 774
SinI GGWCC 5 cut(s) 293, 739, 1448, 1455, 2079
SmiMI CAYNNNNRTG 4 cut(s) 806, 1500, 1731, 2020
SmlI CTYRAG 1 cut(s) 1897
SmoI CTYRAG 1 cut(s) 1897
SseBI AGGCCT 1 cut(s) 2125
SsiI CCGC 6 cut(s) 374, 986, 1036, 1390, 1446, 1642
SspI AATATT 1 cut(s) 1198
SspMI CTAG 2 cut(s) 1313, 2183
SstI GAGCTC 1 cut(s) 1300
StuI AGGCCT 1 cut(s) 2125
StyD4I CCNGG 5 cut(s) 78, 472, 1056, 1441, 1891
StyI CCWWGG 4 cut(s) 1451, 1490, 1531, 2120
TaaI ACNGT 8 cut(s) 24, 898, 1045, 1096, 1502, 2132, 2197, 2215
TaiI ACGT 3 cut(s) 406, 829, 1192
TaqI TCGA 6 cut(s) 60, 705, 931, 1260, 1930, 2220
TatI WGTACW 1 cut(s) 1351
TauI GCSGC 1 cut(s) 1644
TfiI GAWTC 4 cut(s) 843, 1132, 1309, 1844
Tru1I TTAA 8 cut(s) 332, 866, 1071, 1527, 1794, 1811, 1883, 1898
Tru9I TTAA 8 cut(s) 332, 866, 1071, 1527, 1794, 1811, 1883, 1898
TscAI CASTG 9 cut(s) 446, 718, 903, 1048, 1236, 1507, 1680, 1842, 1918
TseFI GTSAC 4 cut(s) 586, 907, 1007, 1559
TseI GCWGC 8 cut(s) 248, 251, 383, 692, 1109, 1118, 1151, 1856
Tsp45I GTSAC 4 cut(s) 586, 907, 1007, 1559
TspDTI ATGAA 7 cut(s) 114, 346, 621, 1620, 1749, 1964, 2035
TspGWI ACGGA 1 cut(s) 1901
TspRI CASTG 9 cut(s) 446, 718, 903, 1048, 1236, 1507, 1680, 1842, 1918
Vha464I CTTAAG 1 cut(s) 1897
VpaK11BI GGWCC 5 cut(s) 293, 739, 1448, 1455, 2079
VspI ATTAAT 1 cut(s) 332
XagI CCTNNNNNAGG 2 cut(s) 1061, 2119
XapI RAATTY 5 cut(s) 40, 195, 757, 876, 1370
XbaI TCTAGA 1 cut(s) 1312
XceI RCATGY 3 cut(s) 630, 1618, 1769
XcmI CCANNNNNNNNNTGG 1 cut(s) 718
XmiI GTMKAC 2 cut(s) 526, 705
XmnI GAANNNNTTC 2 cut(s) 1308, 1867
XspI CTAG 2 cut(s) 1313, 2183
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.