RH2CG449900

ATPase 10, plasma

Design Primers CRISPR Design

Basic Information

Type: Sequence Only
Biological Identity
rosa_samantha
Unknown
OG0014890
Physical Location & Seq
Reverse (-)
0 .. 0
1 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2CG449900.1

Sequence Viewer

Length: 2862 bp
ATGGCTGAAGATCTGGACAAACCGTTGTTGGATCCTGAGAATTTCAATAGAGATGGCATCGATTTGGAACGCTTACCCCTGGAAGAAGTTTTTGAACAACTGAGAACATCAGCGAGAGGACTTTCATCCGATGATGCTGAAGCCAGATTGCACATTTTTGGCTACAACAAACTTGAAGAGAAGACAGAGAACAAAATTTTGAAGTTTCTTAGCTTTATGTGGAACCCCTTGTCATGGGTTATGGAAGCTGCAGCAGTTATGGCACTTGTCCTTGCTAATGGGGGAGGTGAGGGTCCTGACTGGCAAGACTTTGTTGGGATTATTGTCCTATTAATAATCAATTCAACAATTAGTTTCATAGAGGAGAATAATGCGGGAAATGCTGCATCAGCTCTTATGGAACGTTTATCTCCAAAGACAAGGGTTCTCAGAGATGGGCAGTGGCAAGAGCAAGATGCAGGTATTTTAGTGCCAGGAGACATAATTAGCATAAAGCTCGGGGATATAATTCCAGCTGATGCTCGTCTACTTGAAGGAGACCCTCTGAAAGTTGATCAGTCGGCTCTTACAGGAGAGTCTCTGGCTGTCACCAAGAGGACAGGTGATGAAGTATTTTCTGGTTCAACATGTAAGCATGGAGAAATTGAAGCTGTAGTGATAGCAACCGGAGTTCACTCATTTTTTGGAAAAGCAGCACATTTAGTTGACACCACTGAAGTTGTGGGACATTTCCAGCAGGTCCTTACTGCCATTGGGAATTTCTGCATTTGCTCTATAGCTGTGGGAATGGTTCTTGAAATCATTGTCATGTTCCCCATACAGCAACGTTCTTACAGGGATGGAATCAACAACCTTCTTGTTCTCTTAATTGGAGGAATTCCAATTGCTATGCCAACAGTGTTATCTGTGACACTTGCAATTGGTTCTCATCGACTATCTCAACAGGGTGCTATTACAAAAAGGATGACAGCAATTGAAGAAATGGCGGGAATGGATGTCCTTTGTAGTGACAAAACTGGAACTCTTACCCTGAACCGCCTCACTGTTGATAAAAACCTGGTTGAGGTTTTTAACAATAATATAGACAGAGACACAGTTATCTTATTTGCAGCCAGAGCAGCAAGACTGGAGAATCAAGACGCAATTGATGCAGCCATTACCAATATGCTTGGTGATCCAAAGGAGGCACGTGCAAATATCACCGAAGTGCATTTTCTGCCCTTCAATCCAGTGGACAAGCGAACTGCCATTACATACATTGATTCTGATGGTAATTGGTATAGGGCCAGCAAAGGAGCTCCAGAACAGATTCTAGATCTTTGCCCTGAGAAAAATGAGATTGCTGGGAGAGTACATAGCACCATTGACAAATTTGCTGAAAGAGGCTTGCGGTCTCTTGGAGTTGCTTATCAGGAAGTTCCAGAAAAAACTAAAGAAAGCCCTGGCGGTCCTTGGACCTTTTGTGGGTTGTTGCCCTTGTTTGATCCTCCGAGGCATGACAGTGCTGAGACCATTCGTAGAGCACTTAACCTTGGAGTCGCTGTGAAGATGATTACAGGTGACCAGTTGGCAATTGCAAAGGAGACAGGGAGACGGCTTGGTATGGGAACAAACATGTATCCTTCCTCTTCATTATTGGGCCGCAAAAAAGAAGAAGACCACGAAGCCGTGCCAGTGGACGAGCTGATTGAGAAGGCAGATGGCTTTGCTGGTGTCTTCCCTGAACACAAGTATGAAATTGTAAAAATCTTACAAGAAAAGAAGCATGTCGTTGGAATGACTGGAGATGGTGTTAACGATGCACCTGCTTTAAAGAAAGCAGACATTGGTATAGCAGTGGCAGATTCCACAGATGCTGCGAGAAGTGCTTCTGATATAGTCTTAACGGAACCTGGCTTAAGTGTCATTGTCAGTGCTGTCCTGACCAGTCGAGCTATATTCCAGAGAATGAAGAATTATACTATATATGCTGTTTCCATTACCATTAGGATTGTGCTTGGTTTCGTGCTTCTTGCATTGATATGGGAGTATGATTTCCCACCTTTCATGGTTCTGATTATAGCAATACTGAATGATGGGACCATCATGACAATTTCCCAAGATCGGGTAAAGCCCTCTCCAAAGCCTGACAGTTGGAAGTTGAATGAGATATTTGCAACTGGCATTGTCATTGGTACATATCTAGCTTTGGTTACTGTGTTATTTTACTGGACTGTCATTGAGACCACCTTCTTTGAGGACACCTTTGGCTTAATGTCTATATCCGACAACAGTGAGGAAGTTTCATCTGCTGTATATCTGCAAGTTAGCATCATAAGTCAAGCTCTCATATTTGTTACCCGAAGTCAAGGATGGTCATTTCTTGAGAGACCTGGAGCTCTGTTGATGATTGCATTTGTTGTGGCTCAACTGGTGGCTACTCTGATTGCCGTCTATGCGGAAATCAGCTTTGCTTACATTAGCGGCATTGGATGGGGATGGGCTGGAGTCATATGGTTGTATAGTTTGATTTTCTACTTCCCCTTGGACATTATCAAGTTCGCAATTCGCTATGCCTTGAGTGGAGATGCCTGGAATTTATTGTTTGATAGAAAGACAGCTTTTACTGCTAAGAAAGATTATGGGAAGGAAGACAGGGCAGCTAAATGGGTACTTTCTCAGAGAACTTTACAGGGGTTGCATGACATGGAGTTCAAGGCAGGTAGAACTAGCCCCAAAAATGCTGGTTGGATTGCCGAACAGGCCAGACGGCGCGCTGAAATAGCCAGGTTGGGAGAGCTACACACTATGAGAGGACATGTAGAATCTGTAATGAGGCTCAAAAATTTGGACCCGAACGTTATTTCCGCCCACACAGTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000325 GO:0003006 GO:0003674 GO:0003824 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0005911 GO:0006725 GO:0006810 GO:0006811 GO:0006812 GO:0006873 GO:0006885 GO:0006996 GO:0007033 GO:0007035 GO:0007275 GO:0008150 GO:0008152 GO:0008324 GO:0008553 GO:0009058 GO:0009506 GO:0009507 GO:0009536 GO:0009698 GO:0009699 GO:0009705 GO:0009791 GO:0009987 GO:0010023 GO:0010154 GO:0010214 GO:0015075 GO:0015077 GO:0015078 GO:0015318 GO:0015399 GO:0015405 GO:0015662 GO:0015672 GO:0016020 GO:0016043 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0017144 GO:0018130 GO:0018958 GO:0019438 GO:0019725 GO:0019748 GO:0019829 GO:0022414 GO:0022804 GO:0022853 GO:0022857 GO:0022890 GO:0030003 GO:0030004 GO:0030054 GO:0030641 GO:0031090 GO:0032501 GO:0032502 GO:0034220 GO:0036442 GO:0042592 GO:0042623 GO:0042625 GO:0042626 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043492 GO:0044237 GO:0044249 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0044550 GO:0045851 GO:0046189 GO:0046483 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0048878 GO:0050801 GO:0051179 GO:0051234 GO:0051452 GO:0051453 GO:0055044 GO:0055067 GO:0055080 GO:0055082 GO:0055085 GO:0061458 GO:0065007 GO:0065008 GO:0071704 GO:0071840 GO:0090662 GO:0098588 GO:0098655 GO:0098660 GO:0098662 GO:0098771 GO:0098805 GO:0099131 GO:0099132 GO:1901360 GO:1901362 GO:1901576 GO:1901615 GO:1901617 GO:1902600
KEGG Pathways
Metabolic & Signaling
ko00190 map00190
Pfam Domains
Protein Families
Cation_ATPase_N E1-E2_ATPase Hydrolase

Protein Analysis

953

Amino Acids

104.88

Weight (kDa)

5.26

Isoelectric Point (pI)

35.43

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Cation_ATPase_N PF00690 24 - 87 1.3e-14 Cation transporter/ATPase, N-terminus
E1-E2_ATPase PF00122 136 - 235 2.6e-30 P-type ATPase actuator domain
Hydrolase PF00702 331 - 608 2.9e-13 haloacid dehalogenase-like hydrolase
Cation_ATPase PF13246 381 - 499 3.4e-07 P-type ATPase, cytoplasmic domain N
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0014890)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G17260
fragaria_vesca FvH4_6g36241
malus_domestica MD09G1171300.v1.1 MD17G1155800.v1.1
prunus_persica Prupe.3G029800_v2.0.a1 Prupe.3G029800_v2.0.a1
pyrus_communis pycom09g08870 pycom17g14850
rosa_chinensis RchiOBHm_Chr2g0148211
rosa_laevigata RLG00000020327
rosa_multiflora Rmu_sc0002583.1_g000001
rosa_roxburghii Rroxscaffold_2G00098990
rosa_rugosa Rorug02G0404500
rosa_samantha Rh2BG476300 Rh2CG449900
rosa_wichuraiana Rw2G037760

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1813
Acc36I ACCTGC 4 cut(s) 449, 727, 1813, 2690
AccI GTMKAC 1 cut(s) 526
AccII CGCG 1 cut(s) 2754
AciI CCGC 9 cut(s) 374, 986, 1036, 1390, 1446, 1642, 2438, 2463, 2847
AclI AACGTT 3 cut(s) 403, 826, 2838
AclWI GGATC 4 cut(s) 26, 39, 1169, 1478
AcsI RAATTY 7 cut(s) 40, 195, 757, 876, 1370, 2575, 2824
AcuI CTGAAG 3 cut(s) 27, 159, 735
AcvI CACGTG 1 cut(s) 1190
AfaI GTAC 3 cut(s) 1353, 2176, 2652
AfiI CCNNNNNNNGG 5 cut(s) 234, 1063, 1464, 2103, 2104
AflII CTTAAG 1 cut(s) 1897
AflIII ACRYGT 3 cut(s) 626, 1614, 2797
AjnI CCWGG 8 cut(s) 78, 472, 1056, 1441, 1891, 2371, 2570, 2765
AleI CACNNNNGTG 1 cut(s) 1205
AloI GAACNNNNNNTCC 2 cut(s) 2828, 2860
Alw21I GWGCWC 3 cut(s) 1300, 1525, 2380
AlwI GGATC 4 cut(s) 26, 39, 1169, 1478
AlwNI CAGNNNCTG 1 cut(s) 1856
Ama87I CYCGRG 1 cut(s) 497
AoxI GGCC 3 cut(s) 1284, 1639, 2742
ApeKI GCWGC 9 cut(s) 248, 251, 383, 692, 1109, 1118, 1151, 1856, 2639
ApoI RAATTY 7 cut(s) 40, 195, 757, 876, 1370, 2575, 2824
AseI ATTAAT 1 cut(s) 332
Asp700I GAANNNNTTC 2 cut(s) 1308, 1867
AspLEI GCGC 2 cut(s) 2754, 2756
AspS9I GGNCC 8 cut(s) 293, 739, 1284, 1448, 1455, 1639, 2079, 2830
AsuHPI GGTGA 6 cut(s) 299, 580, 614, 1184, 1192, 1571
AvaI CYCGRG 1 cut(s) 497
AvaII GGWCC 6 cut(s) 293, 739, 1448, 1455, 2079, 2830
BamHI GGATCC 1 cut(s) 31
BanII GRGCYC 2 cut(s) 1300, 2380
BbrPI CACGTG 1 cut(s) 1190
BbsI GAAGAC 4 cut(s) 188, 1662, 1708, 2637
Bbv12I GWGCWC 3 cut(s) 1300, 1525, 2380
BbvI GCAGC 9 cut(s) 235, 263, 370, 704, 1121, 1130, 1163, 1843, 2651
BceAI ACGGC 4 cut(s) 1610, 1652, 2414, 2765
BcgI CGANNNNNNTGC 4 cut(s) 478, 512, 1787, 1821
BciT130I CCWGG 8 cut(s) 80, 474, 1058, 1443, 1893, 2373, 2572, 2767
BciVI GTATCC 1 cut(s) 1629
BclI TGATCA 1 cut(s) 553
BfaI CTAG 3 cut(s) 1313, 2183, 2709
BfmI CTRYAG 3 cut(s) 249, 651, 774
BfrI CTTAAG 1 cut(s) 1897
BfuAI ACCTGC 4 cut(s) 449, 727, 1813, 2690
BfuI GTATCC 1 cut(s) 1629
BglI GCCNNNNNGGC 1 cut(s) 2741
BglII AGATCT 2 cut(s) 10, 1315
Bme1390I CCNGG 8 cut(s) 80, 474, 1058, 1443, 1893, 2373, 2572, 2767
Bme18I GGWCC 6 cut(s) 293, 739, 1448, 1455, 2079, 2830
BmeT110I CYCGRG 1 cut(s) 497
BmgT120I GGNCC 8 cut(s) 293, 739, 1284, 1448, 1455, 1639, 2079, 2830
BmiI GGNNCC 6 cut(s) 33, 224, 294, 1890, 2080, 2832
BmrFI CCNGG 8 cut(s) 80, 474, 1058, 1443, 1893, 2373, 2572, 2767
BpiI GAAGAC 4 cut(s) 188, 1662, 1708, 2637
BpmI CTGGAG 5 cut(s) 1148, 1284, 1803, 2394, 2505
BpuEI CTTGAG 2 cut(s) 2384, 2578
Bsa29I ATCGAT 1 cut(s) 60
BsaAI YACGTR 1 cut(s) 1190
BsaI GGTCTC 5 cut(s) 531, 1398, 1502, 2216, 2362
BsaJI CCNNGG 6 cut(s) 78, 1441, 1451, 1490, 1531, 2523
BsaWI WCCGGW 1 cut(s) 665
BsaXI ACNNNNNCTCC 4 cut(s) 1527, 1557, 1776, 1806
Bsc4I CCNNNNNNNGG 5 cut(s) 234, 1063, 1464, 2103, 2104
BseBI CCWGG 8 cut(s) 80, 474, 1058, 1443, 1893, 2373, 2572, 2767
BseCI ATCGAT 1 cut(s) 60
BseDI CCNNGG 6 cut(s) 78, 1441, 1451, 1490, 1531, 2523
BseGI GGATG 7 cut(s) 125, 844, 969, 1000, 2357, 2477, 2483
BseLI CCNNNNNNNGG 5 cut(s) 234, 1063, 1464, 2103, 2104
BseMII CTCAG 6 cut(s) 27, 92, 442, 1317, 1497, 2672
BsePI GCGCGC 1 cut(s) 2752
BseRI GAGGAG 1 cut(s) 377
BseXI GCAGC 9 cut(s) 235, 263, 370, 704, 1121, 1130, 1163, 1843, 2651
BseYI CCCAGC 1 cut(s) 1343
Bsh1236I CGCG 1 cut(s) 2754
BshFI GGCC 3 cut(s) 1286, 1641, 2744
BshVI ATCGAT 1 cut(s) 60
BsiHKAI GWGCWC 3 cut(s) 1300, 1525, 2380
BsiHKCI CYCGRG 1 cut(s) 497
BsiSI CCGG 1 cut(s) 666
BslFI GGGAC 2 cut(s) 738, 2092
BslI CCNNNNNNNGG 5 cut(s) 234, 1063, 1464, 2103, 2104
BsmBI CGTCTC 1 cut(s) 1585
BsmFI GGGAC 2 cut(s) 738, 2092
BsnI GGCC 3 cut(s) 1286, 1641, 2744
Bso31I GGTCTC 5 cut(s) 531, 1398, 1502, 2216, 2362
BsoBI CYCGRG 1 cut(s) 497
Bsp1286I GDGCHC 3 cut(s) 1300, 1525, 2380
Bsp143I GATC 7 cut(s) 10, 31, 553, 1174, 1315, 1483, 2101
BspACI CCGC 9 cut(s) 374, 986, 1036, 1390, 1446, 1642, 2438, 2463, 2847
BspANI GGCC 3 cut(s) 1286, 1641, 2744
BspCNI CTCAG 6 cut(s) 28, 93, 441, 1318, 1498, 2671
BspDI ATCGAT 1 cut(s) 60
BspFNI CGCG 1 cut(s) 2754
BspHI TCATGA 1 cut(s) 2085
BspLI GGNNCC 6 cut(s) 33, 224, 294, 1890, 2080, 2832
BspMAI CTGCAG 1 cut(s) 253
BspMI ACCTGC 4 cut(s) 449, 727, 1813, 2690
BspPI GGATC 4 cut(s) 26, 39, 1169, 1478
BspTI CTTAAG 1 cut(s) 1897
BspTNI GGTCTC 5 cut(s) 531, 1398, 1502, 2216, 2362
BssECI CCNNGG 6 cut(s) 78, 1441, 1451, 1490, 1531, 2523
BssHII GCGCGC 1 cut(s) 2752
BssMI GATC 7 cut(s) 10, 31, 553, 1174, 1315, 1483, 2101
BssT1I CCWWGG 3 cut(s) 1451, 1531, 2523
Bst2UI CCWGG 8 cut(s) 80, 474, 1058, 1443, 1893, 2373, 2572, 2767
Bst6I CTCTTC 2 cut(s) 171, 1633
BstAFI CTTAAG 1 cut(s) 1897
BstAPI GCANNNNNTGC 2 cut(s) 1148, 1216
BstBAI YACGTR 1 cut(s) 1190
BstC8I GCNNGC 3 cut(s) 1288, 1388, 2754
BstDEI CTNAG 8 cut(s) 36, 101, 209, 428, 1326, 1506, 2610, 2658
BstEII GGTNACC 1 cut(s) 1559
BstENI CCTNNNNNAGG 1 cut(s) 1061
BstF5I GGATG 7 cut(s) 125, 844, 969, 1000, 2357, 2477, 2483
BstFNI CGCG 1 cut(s) 2754
BstHHI GCGC 2 cut(s) 2754, 2756
BstKTI GATC 7 cut(s) 13, 34, 556, 1177, 1318, 1486, 2104
BstMBI GATC 7 cut(s) 10, 31, 553, 1174, 1315, 1483, 2101
BstNI CCWGG 8 cut(s) 80, 474, 1058, 1443, 1893, 2373, 2572, 2767
BstNSI RCATGY 4 cut(s) 630, 1618, 1769, 2801
BstPI GGTNACC 1 cut(s) 1559
BstSCI CCNGG 8 cut(s) 78, 472, 1056, 1441, 1891, 2371, 2570, 2765
BstSFI CTRYAG 3 cut(s) 249, 651, 774
BstUI CGCG 1 cut(s) 2754
BstV1I GCAGC 9 cut(s) 235, 263, 370, 704, 1121, 1130, 1163, 1843, 2651
BstV2I GAAGAC 4 cut(s) 188, 1662, 1708, 2637
BstX2I RGATCY 3 cut(s) 10, 31, 1315
BstYI RGATCY 3 cut(s) 10, 31, 1315
Bsu15I ATCGAT 1 cut(s) 60
BsuI GTATCC 1 cut(s) 1629
BsuRI GGCC 3 cut(s) 1286, 1641, 2744
BsuTUI ATCGAT 1 cut(s) 60
BtsCI GGATG 7 cut(s) 125, 844, 969, 1000, 2357, 2477, 2483
BtsI GCAGTG 2 cut(s) 446, 1842
BveI ACCTGC 4 cut(s) 449, 727, 1813, 2690
Cac8I GCNNGC 3 cut(s) 1288, 1388, 2754
CaiI CAGNNNCTG 1 cut(s) 1856
CciI TCATGA 1 cut(s) 2085
CfoI GCGC 2 cut(s) 2754, 2756
Cfr13I GGNCC 8 cut(s) 293, 739, 1284, 1448, 1455, 1639, 2079, 2830
ClaI ATCGAT 1 cut(s) 60
CseI GACGC 1 cut(s) 1148
CsiI ACCWGGT 1 cut(s) 1056
Csp6I GTAC 3 cut(s) 1352, 2175, 2651
CspCI CAANNNNNGTGG 4 cut(s) 700, 735, 2215, 2250
CviQI GTAC 3 cut(s) 1352, 2175, 2651
DdeI CTNAG 8 cut(s) 36, 101, 209, 428, 1326, 1506, 2610, 2658
DpnI GATC 7 cut(s) 12, 33, 555, 1176, 1317, 1485, 2103
DpnII GATC 7 cut(s) 10, 31, 553, 1174, 1315, 1483, 2101
DraI TTTAAA 1 cut(s) 1812
Eam1104I CTCTTC 2 cut(s) 171, 1633
EarI CTCTTC 2 cut(s) 171, 1633
EciI GGCGGA 1 cut(s) 2836
Ecl136II GAGCTC 2 cut(s) 1298, 2378
Eco130I CCWWGG 3 cut(s) 1451, 1531, 2523
Eco24I GRGCYC 2 cut(s) 1300, 2380
Eco31I GGTCTC 5 cut(s) 531, 1398, 1502, 2216, 2362
Eco47I GGWCC 6 cut(s) 293, 739, 1448, 1455, 2079, 2830
Eco53kI GAGCTC 2 cut(s) 1298, 2378
Eco57I CTGAAG 3 cut(s) 27, 159, 735
Eco72I CACGTG 1 cut(s) 1190
Eco88I CYCGRG 1 cut(s) 497
Eco91I GGTNACC 1 cut(s) 1559
EcoICRI GAGCTC 2 cut(s) 1298, 2378
EcoNI CCTNNNNNAGG 1 cut(s) 1061
EcoO109I RGGNCCY 2 cut(s) 293, 739
EcoO65I GGTNACC 1 cut(s) 1559
EcoRI GAATTC 1 cut(s) 876
EcoRII CCWGG 8 cut(s) 78, 472, 1056, 1441, 1891, 2371, 2570, 2765
EcoT14I CCWWGG 3 cut(s) 1451, 1531, 2523
EcoT38I GRGCYC 2 cut(s) 1300, 2380
ErhI CCWWGG 3 cut(s) 1451, 1531, 2523
Esp3I CGTCTC 1 cut(s) 1585
FaqI GGGAC 2 cut(s) 738, 2092
FauI CCCGC 2 cut(s) 367, 979
FauNDI CATATG 1 cut(s) 2492
FbaI TGATCA 1 cut(s) 553
FblI GTMKAC 1 cut(s) 526
FokI GGATG 7 cut(s) 112, 851, 976, 1007, 2364, 2484, 2490
FriOI GRGCYC 2 cut(s) 1300, 2380
FspBI CTAG 3 cut(s) 1313, 2183, 2709
GlaI GCGC 2 cut(s) 2753, 2755
GsaI CCCAGC 1 cut(s) 1347
GsuI CTGGAG 5 cut(s) 1148, 1284, 1803, 2394, 2505
HaeIII GGCC 3 cut(s) 1286, 1641, 2744
HapII CCGG 1 cut(s) 666
HgaI GACGC 1 cut(s) 1148
HhaI GCGC 2 cut(s) 2754, 2756
Hin6I GCGC 2 cut(s) 2752, 2754
HinP1I GCGC 2 cut(s) 2752, 2754
HincII GTYRAC 2 cut(s) 706, 1795
HindII GTYRAC 2 cut(s) 706, 1795
HinfI GANTC 9 cut(s) 575, 843, 1132, 1262, 1309, 1536, 1844, 2487, 2804
HpaI GTTAAC 1 cut(s) 1795
HpaII CCGG 1 cut(s) 666
HphI GGTGA 6 cut(s) 299, 580, 614, 1184, 1192, 1571
Hpy166II GTNNAC 6 cut(s) 527, 673, 706, 1234, 1678, 1795
Hpy8I GTNNAC 6 cut(s) 527, 673, 706, 1234, 1678, 1795
HpyAV CCTTC 7 cut(s) 527, 863, 1231, 1632, 1687, 2239, 2620
HpyCH4IV ACGT 4 cut(s) 403, 826, 1189, 2838
HpyF3I CTNAG 8 cut(s) 36, 101, 209, 428, 1326, 1506, 2610, 2658
HpySE526I ACGT 4 cut(s) 403, 826, 1189, 2838
HspAI GCGC 2 cut(s) 2752, 2754
Ksp22I TGATCA 1 cut(s) 553
KspAI GTTAAC 1 cut(s) 1795
Kzo9I GATC 7 cut(s) 10, 31, 553, 1174, 1315, 1483, 2101
LmnI GCTCC 3 cut(s) 1295, 1303, 2375
Lsp1109I GCAGC 9 cut(s) 235, 263, 370, 704, 1121, 1130, 1163, 1843, 2651
MabI ACCWGGT 1 cut(s) 1056
MaeI CTAG 3 cut(s) 1313, 2183, 2709
MaeII ACGT 4 cut(s) 403, 826, 1189, 2838
MaeIII GTNAC 6 cut(s) 586, 907, 1007, 1559, 2191, 2335
MalI GATC 7 cut(s) 12, 33, 555, 1176, 1317, 1485, 2103
MboI GATC 7 cut(s) 10, 31, 553, 1174, 1315, 1483, 2101
MfeI CAATTG 5 cut(s) 882, 918, 972, 1143, 1572
MflI RGATCY 3 cut(s) 10, 31, 1315
MhlI GDGCHC 3 cut(s) 1300, 1525, 2380
MlyI GAGTC 3 cut(s) 584, 1545, 2496
MmeI TCCRAC 5 cut(s) 9, 1753, 2114, 2289, 2708
MroXI GAANNNNTTC 2 cut(s) 1308, 1867
MseI TTAA 9 cut(s) 332, 866, 1071, 1527, 1794, 1811, 1883, 1898, 2252
MslI CAYNNNNRTG 5 cut(s) 806, 1205, 1500, 1731, 2020
MspA1I CMGCKG 1 cut(s) 515
MspCI CTTAAG 1 cut(s) 1897
MspI CCGG 1 cut(s) 666
MspR9I CCNGG 8 cut(s) 80, 474, 1058, 1443, 1893, 2373, 2572, 2767
MunI CAATTG 5 cut(s) 882, 918, 972, 1143, 1572
MvaI CCWGG 8 cut(s) 80, 474, 1058, 1443, 1893, 2373, 2572, 2767
MvnI CGCG 1 cut(s) 2754
NdeI CATATG 1 cut(s) 2492
NdeII GATC 7 cut(s) 10, 31, 553, 1174, 1315, 1483, 2101
NlaIV GGNNCC 6 cut(s) 33, 224, 294, 1890, 2080, 2832
NmuCI GTSAC 4 cut(s) 586, 907, 1007, 1559
NspI RCATGY 4 cut(s) 630, 1618, 1769, 2801
OliI CACNNNNGTG 1 cut(s) 1205
PagI TCATGA 1 cut(s) 2085
PaqCI CACCTGC 1 cut(s) 1813
PauI GCGCGC 1 cut(s) 2752
PciI ACATGT 3 cut(s) 626, 1614, 2797
PdmI GAANNNNTTC 2 cut(s) 1308, 1867
PfeI GAWTC 6 cut(s) 843, 1132, 1262, 1309, 1844, 2804
PleI GAGTC 3 cut(s) 583, 1544, 2495
PmaCI CACGTG 1 cut(s) 1190
PmlI CACGTG 1 cut(s) 1190
PpsI GAGTC 3 cut(s) 583, 1544, 2495
Ppu21I YACGTR 1 cut(s) 1190
PpuMI RGGWCCY 2 cut(s) 293, 739
PscI ACATGT 3 cut(s) 626, 1614, 2797
PshBI ATTAAT 1 cut(s) 332
Psp124BI GAGCTC 2 cut(s) 1300, 2380
Psp1406I AACGTT 3 cut(s) 403, 826, 2838
Psp5II RGGWCCY 2 cut(s) 293, 739
Psp6I CCWGG 8 cut(s) 78, 472, 1056, 1441, 1891, 2371, 2570, 2765
PspCI CACGTG 1 cut(s) 1190
PspEI GGTNACC 1 cut(s) 1559
PspFI CCCAGC 1 cut(s) 1343
PspGI CCWGG 8 cut(s) 78, 472, 1056, 1441, 1891, 2371, 2570, 2765
PspN4I GGNNCC 6 cut(s) 33, 224, 294, 1890, 2080, 2832
PspPI GGNCC 8 cut(s) 293, 739, 1284, 1448, 1455, 1639, 2079, 2830
PspPPI RGGWCCY 2 cut(s) 293, 739
PsrI GAACNNNNNNTAC 2 cut(s) 1234, 1266
PstI CTGCAG 1 cut(s) 253
PstNI CAGNNNCTG 1 cut(s) 1856
PsuI RGATCY 3 cut(s) 10, 31, 1315
PteI GCGCGC 1 cut(s) 2752
PvuII CAGCTG 1 cut(s) 515
RsaI GTAC 3 cut(s) 1353, 2176, 2652
RsaNI GTAC 3 cut(s) 1352, 2175, 2651
RseI CAYNNNNRTG 5 cut(s) 806, 1205, 1500, 1731, 2020
SacI GAGCTC 2 cut(s) 1300, 2380
SaqAI TTAA 9 cut(s) 332, 866, 1071, 1527, 1794, 1811, 1883, 1898, 2252
Sau3AI GATC 7 cut(s) 10, 31, 553, 1174, 1315, 1483, 2101
Sau96I GGNCC 8 cut(s) 293, 739, 1284, 1448, 1455, 1639, 2079, 2830
SchI GAGTC 3 cut(s) 584, 1545, 2496
ScrFI CCNGG 8 cut(s) 80, 474, 1058, 1443, 1893, 2373, 2572, 2767
SduI GDGCHC 3 cut(s) 1300, 1525, 2380
SexAI ACCWGGT 1 cut(s) 1056
SfcI CTRYAG 3 cut(s) 249, 651, 774
SinI GGWCC 6 cut(s) 293, 739, 1448, 1455, 2079, 2830
SmiMI CAYNNNNRTG 5 cut(s) 806, 1205, 1500, 1731, 2020
SmlI CTYRAG 3 cut(s) 1897, 2363, 2557
SmoI CTYRAG 3 cut(s) 1897, 2363, 2557
SsiI CCGC 9 cut(s) 374, 986, 1036, 1390, 1446, 1642, 2438, 2463, 2847
SspMI CTAG 3 cut(s) 1313, 2183, 2709
SstI GAGCTC 2 cut(s) 1300, 2380
StyD4I CCNGG 8 cut(s) 78, 472, 1056, 1441, 1891, 2371, 2570, 2765
StyI CCWWGG 3 cut(s) 1451, 1531, 2523
TaiI ACGT 4 cut(s) 406, 829, 1192, 2841
TaqI TCGA 3 cut(s) 60, 931, 1930
TatI WGTACW 1 cut(s) 1351
TauI GCSGC 2 cut(s) 1644, 2466
TfiI GAWTC 6 cut(s) 843, 1132, 1262, 1309, 1844, 2804
Tru1I TTAA 9 cut(s) 332, 866, 1071, 1527, 1794, 1811, 1883, 1898, 2252
Tru9I TTAA 9 cut(s) 332, 866, 1071, 1527, 1794, 1811, 1883, 1898, 2252
TseFI GTSAC 4 cut(s) 586, 907, 1007, 1559
TseI GCWGC 9 cut(s) 248, 251, 383, 692, 1109, 1118, 1151, 1856, 2639
Tsp45I GTSAC 4 cut(s) 586, 907, 1007, 1559
TspDTI ATGAA 8 cut(s) 114, 346, 621, 1620, 1749, 1964, 2035, 2274
TspGWI ACGGA 1 cut(s) 1901
Vha464I CTTAAG 1 cut(s) 1897
VpaK11BI GGWCC 6 cut(s) 293, 739, 1448, 1455, 2079, 2830
VspI ATTAAT 1 cut(s) 332
XagI CCTNNNNNAGG 1 cut(s) 1061
XapI RAATTY 7 cut(s) 40, 195, 757, 876, 1370, 2575, 2824
XbaI TCTAGA 1 cut(s) 1312
XceI RCATGY 4 cut(s) 630, 1618, 1769, 2801
XcmI CCANNNNNNNNNTGG 1 cut(s) 718
XmiI GTMKAC 1 cut(s) 526
XmnI GAANNNNTTC 2 cut(s) 1308, 1867
XspI CTAG 3 cut(s) 1313, 2183, 2709
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.