pycom09g08870

ATPase 10, plasma

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr9
OG0014890
Physical Location & Seq
Forward (+)
7023210 .. 7027844
4635 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom09g08870.6

Sequence Viewer

Length: 2637 bp
ATGTGGAACCCCTTGTCATGGGTCATGGAAGCTGCAGCTGTAATGGCACTTGTCCTCGCTAATGGTGGAGGTGAGGGTCCTGATTGGCAGGACTTTGTAGGTATTATTATCCTGCTAATCCTCAACTCGACGATTAGTTTCATAGAGGAGAATAATGCAGGGAATGCTGCATCAGCTCTAATGGATCGCTTAGCTCCAAAGACAAGGGTTCTTAGAGATGGGCGCTGGACAGAGCAAGATGCATCTATTTTAGTACCAGGTGACATAATTAGCATTAAGCTCGGGGACATAATTCCGGCTGATGCTCGTCTGCTTGAAGGAGATCCCCTGAAAGTTGACCAGTCAGCTCTTACAGGAGAGTCTCTAGCTGTCACCAAGAAGACAGGTGATGAAGTATTTTCTGGTTCAACGTGTAAGCATGGAGAGATTGAAGCTGTTGTGATCGCGACCGGAGTTAACTCCTTTTTCGGAAGGGCAGCACATTTGGTGGACTCCACTGAAGTTATTGGACATTTCCAGCAGGTACTTACCGCCATTGGGAATTTCTGCATTTGCTCTATTGCTGTGGGAATGATTCTTGAAATCATTGTCATGTTCCCAGTACAGCACCGCTCTTACAGGGATGGAATCAACAACCTTCTTGTTCTCTTAATTGGAGGAATTCCAATCGCTATGCCAACGGTGTTATCTGTCACTCTTGCCATTGGTTCTCATCGACTTTCTCAACAGGGTGCCATTACGAAAAGGATGACAGCAATTGAAGAGATGGCAGGAATGGATGTCCTCTGCAGTGACAAAACCGGAACTCTCACTCTGAATCGCCTCACTGTTGATAGAAACCTAGTCGAGGTTTTCAACAAAGATCTAGATAAAGACGCGGTTATCATGTTTGCAGCCAGAGCAGCTAGACTGGAGAACCAGGACGCTATTGATGCAGCCATCGTCAATATGCTTGCTGATCCAAAGGAGGCACGAGCAGGCATTACCGAAGTGCATTTTCTGCCCTTCAATCCGGTGGACAAGCGTACTGCTATTACATACATTGATATGGAAGGTAAATGGTATCGGGCTAGCAAAGGAGCTCCGGAACAGATTCTAGATCTATGCCCGGAGAAAGACAAGATTGCTGGAAGGATGCATTCGATTATTGACAAATTCGCTGAAAGGGGATTGCGGTCTCTTGGAGTTGCTTATCAGGAAGTTCCCGAAAAAACTAAGGATAGCCCTGGAGGTCCATGGATATTTGCTGGGTTGTTGCCCTTGTTTGATCCTCCAAGGCATGACAGTGCTGAGACCATCCGTAGAGCGCTTAACCTCGGAGTCTGTGTGAAGATGATTACAGGTGATCAGTTGGCAATTGCAAAGGAAACAGGGCGGCGACTTGGTATGGGAACAAACATGTACCCCTCCTCTTCGTTATTAGGCCGTCATGTAGAAGAACATGAAGCTCTTCCGGTGGAAGATTTGATTGAGAAGGCTGATGGCTTTGCTGGTGTCTTCCCTGAACACAAGTACGAAATTGTAAAGATTTTACAAGAAAAGAAGCACGTCGTTGGGATGACTGGAGACGGAGTAAACGATGCTCCTGCTTTAAAGAAAGCAGACATTGGTATAGCAGTGGCAGATTCCACAGATGCTGCAAGAAGTGCTTCTGATATAGTCTTAACTGAGCCTGGATTGAGTGTGATAGTCAGTGCTGTCCTCACCAGTCGCGCTATATTCCAAAGAATGAAGAATTACACGATATATGCTGTCTCCATAACCATTAGGATTGTGCTTGGTTTCGTGCTTCTTGCATTGATCTGGGAATATGACTTCCCACCTTTCATGGTTCTGATAATAGCCATACTGAATGACGGAACCATCATGACAATTTCGCAGGATCGCGTAAAGCCCTCCCCAAAGCCTGATAGTTGGAAGCTGAAAGAGATATTTGCTACTGGCATTGTCATTGGCACATACCTTGCTTTAGTTACGGTATTATTCTACTGGGTTGTTATTGACACTGACTTCTTTGAGAGCACCTTCAATGTAAGAGATTTATCGAGCAGTAGCGAGGAAGTTTCATCTGCTGTATATCTGCAAGTCAGTATCATCAGCCAGGCTCTCATATTTGTGACAAGAAGCCAGGGGTGGTCATTTCTTGAGAGGCCCGGAACTATGTTGATGTGCGCTTTTGTGTTGGCTCAACTGGTGGCAACTCTGATTGCTGTATATGCAAAAATCAGCTTTGCATATATCAGCGGCATTGGATGGGGATGGGCCGGTGTCATCTGGTTGTACAGTCTGATTTTCTACATTCCTTTGGACATCATTAAATTCATAATTCGCTATGCATTGACCGGAGATGCCTGGAATCTGTTATTCGAAAGAAAGACAGCTTTCACTAGTAAGAAAGACTATGGGAAGGAAGATCGGGCAGCTAAATGGATACTTTCTCAGAAAAGCTTACAAGGGTTGCAAGACTTTGAGATCAACAGGTCCGGCAAGCGTTCTTCTTTGATTGCAGAACAGGCCAGGCGGCGCGCTGAAATTGCCAGGCTCGGGGAGATACACACTCTGAAAGGACATGTAGAATCTGTACTGAGGCTCAAGAATTTGGACCTGAGTGTCATGCAATCAGCCCATACAGTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000325 GO:0003006 GO:0003674 GO:0003824 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0005911 GO:0006725 GO:0006810 GO:0006811 GO:0006812 GO:0006873 GO:0006885 GO:0006996 GO:0007033 GO:0007035 GO:0007275 GO:0008150 GO:0008152 GO:0008324 GO:0008553 GO:0009058 GO:0009506 GO:0009507 GO:0009536 GO:0009698 GO:0009699 GO:0009705 GO:0009791 GO:0009987 GO:0010023 GO:0010154 GO:0010214 GO:0015075 GO:0015077 GO:0015078 GO:0015318 GO:0015399 GO:0015405 GO:0015662 GO:0015672 GO:0016020 GO:0016043 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0017144 GO:0018130 GO:0018958 GO:0019438 GO:0019725 GO:0019748 GO:0019829 GO:0022414 GO:0022804 GO:0022853 GO:0022857 GO:0022890 GO:0030003 GO:0030004 GO:0030054 GO:0030641 GO:0031090 GO:0032501 GO:0032502 GO:0034220 GO:0036442 GO:0042592 GO:0042623 GO:0042625 GO:0042626 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043492 GO:0044237 GO:0044249 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0044550 GO:0045851 GO:0046189 GO:0046483 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0048878 GO:0050801 GO:0051179 GO:0051234 GO:0051452 GO:0051453 GO:0055044 GO:0055067 GO:0055080 GO:0055082 GO:0055085 GO:0061458 GO:0065007 GO:0065008 GO:0071704 GO:0071840 GO:0090662 GO:0098588 GO:0098655 GO:0098660 GO:0098662 GO:0098771 GO:0098805 GO:0099131 GO:0099132 GO:1901360 GO:1901362 GO:1901576 GO:1901615 GO:1901617 GO:1902600
KEGG Pathways
Metabolic & Signaling
ko00190 map00190
Pfam Domains
Protein Families
Cation_ATPase_N E1-E2_ATPase Hydrolase

Protein Analysis

879

Amino Acids

96.34

Weight (kDa)

5.8

Isoelectric Point (pI)

37.51

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0014890)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G17260
fragaria_vesca FvH4_6g36241
malus_domestica MD09G1171300.v1.1 MD17G1155800.v1.1
prunus_persica Prupe.3G029800_v2.0.a1 Prupe.3G029800_v2.0.a1
pyrus_communis pycom09g08870 pycom17g14850
rosa_chinensis RchiOBHm_Chr2g0148211
rosa_laevigata RLG00000020327
rosa_multiflora Rmu_sc0002583.1_g000001
rosa_roxburghii Rroxscaffold_2G00098990
rosa_rugosa Rorug02G0404500
rosa_samantha Rh2BG476300 Rh2CG449900
rosa_wichuraiana Rw2G037760

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 2609
Acc36I ACCTGC 1 cut(s) 511
AccB1I GGYRCC 1 cut(s) 731
AccBSI CCGCTC 1 cut(s) 612
AccII CGCG 5 cut(s) 446, 878, 1713, 1887, 2526
AccIII TCCGGA 1 cut(s) 1084
AciI CCGC 7 cut(s) 531, 610, 878, 1174, 1375, 2244, 2521
AclWI GGATC 5 cut(s) 192, 317, 953, 1262, 1890
AcsI RAATTY 5 cut(s) 541, 660, 1154, 2318, 2596
AcuI CTGAAG 1 cut(s) 519
AfaI GTAC 8 cut(s) 255, 525, 603, 1027, 1403, 1514, 2282, 2583
AfeI AGCGCT 1 cut(s) 1308
AfiI CCNNNNNNNGG 4 cut(s) 18, 537, 847, 2544
AflIII ACRYGT 3 cut(s) 410, 1398, 2569
AgsI TTSAA 8 cut(s) 317, 408, 431, 581, 761, 856, 1009, 2029
AhlI ACTAGT 1 cut(s) 2387
AjiI CACGTC 1 cut(s) 1549
AjnI CCWGG 9 cut(s) 256, 918, 1225, 1672, 2100, 2127, 2351, 2516, 2537
Alw21I GWGCWC 2 cut(s) 1084, 2024
Alw26I GTCTC 5 cut(s) 366, 1182, 1286, 1560, 1759
AlwI GGATC 5 cut(s) 192, 317, 953, 1262, 1890
AlwNI CAGNNNCTG 1 cut(s) 1637
Ama87I CYCGRG 2 cut(s) 281, 2543
Aor13HI TCCGGA 1 cut(s) 1084
Aor51HI AGCGCT 1 cut(s) 1308
AoxI GGCC 4 cut(s) 1423, 2150, 2262, 2514
ApeKI GCWGC 9 cut(s) 32, 35, 167, 476, 893, 902, 935, 1637, 2420
ApoI RAATTY 5 cut(s) 541, 660, 1154, 2318, 2596
Asp700I GAANNNNTTC 3 cut(s) 1092, 1449, 1648
AspLEI GCGC 6 cut(s) 225, 1309, 1715, 2174, 2526, 2528
AspS9I GGNCC 6 cut(s) 77, 1232, 2151, 2262, 2481, 2602
AsuC2I CCSGG 2 cut(s) 1109, 2154
AsuHPI GGTGA 6 cut(s) 83, 272, 364, 398, 1355, 1696
AsuII TTCGAA 1 cut(s) 2367
AsuNHI GCTAGC 1 cut(s) 1070
AvaI CYCGRG 2 cut(s) 281, 2543
AvaII GGWCC 4 cut(s) 77, 1232, 2481, 2602
BanI GGYRCC 1 cut(s) 731
BanII GRGCYC 1 cut(s) 1084
BauI CACGAG 1 cut(s) 972
BbsI GAAGAC 2 cut(s) 386, 1489
Bbv12I GWGCWC 2 cut(s) 1084, 2024
BbvI GCAGC 9 cut(s) 19, 47, 154, 488, 905, 914, 947, 1624, 2432
BccI CCATC 9 cut(s) 212, 617, 760, 947, 1304, 1475, 1871, 2247, 2253
BceAI ACGGC 1 cut(s) 1410
BcgI CGANNNNNNTGC 4 cut(s) 262, 296, 1568, 1602
BciT130I CCWGG 9 cut(s) 258, 920, 1227, 1674, 2102, 2129, 2353, 2518, 2539
BciVI GTATCC 1 cut(s) 2424
BclI TGATCA 1 cut(s) 1345
BcnI CCSGG 2 cut(s) 1109, 2154
BcoDI GTCTC 5 cut(s) 366, 1182, 1286, 1560, 1759
BcuI ACTAGT 1 cut(s) 2387
BfaI CTAG 7 cut(s) 365, 842, 866, 906, 1071, 1097, 2388
BfmI CTRYAG 2 cut(s) 33, 787
BfoI RGCGCY 2 cut(s) 226, 1310
BfuAI ACCTGC 1 cut(s) 511
BfuI GTATCC 1 cut(s) 2424
BglII AGATCT 2 cut(s) 862, 1099
BlpI GCTNAGC 1 cut(s) 190
Bme18I GGWCC 4 cut(s) 77, 1232, 2481, 2602
BmeT110I CYCGRG 2 cut(s) 281, 2543
BmgBI CACGTC 1 cut(s) 1549
BmgT120I GGNCC 6 cut(s) 77, 1232, 2151, 2262, 2481, 2602
BmiI GGNNCC 4 cut(s) 8, 78, 733, 1861
BmrI ACTGGG 2 cut(s) 593, 1999
BmsI GCATC 9 cut(s) 179, 229, 251, 292, 922, 1125, 1570, 1624, 2338
BmtI GCTAGC 1 cut(s) 1074
BmuI ACTGGG 2 cut(s) 593, 1999
BpiI GAAGAC 2 cut(s) 386, 1489
BpmI CTGGAG 3 cut(s) 932, 1248, 1584
Bpu1102I GCTNAGC 1 cut(s) 190
Bpu14I TTCGAA 1 cut(s) 2367
BpuEI CTTGAG 2 cut(s) 2165, 2576
BpuMI CCSGG 2 cut(s) 1109, 2154
BsaI GGTCTC 2 cut(s) 1182, 1286
BsaJI CCNNGG 5 cut(s) 1225, 1235, 1274, 1315, 2128
BsaWI WCCGGW 6 cut(s) 449, 800, 1012, 1084, 1453, 2342
BsaXI ACNNNNNCTCC 4 cut(s) 1311, 1341, 1557, 1587
Bsc4I CCNNNNNNNGG 4 cut(s) 18, 537, 847, 2544
Bse118I RCCGGY 1 cut(s) 2264
Bse1I ACTGG 8 cut(s) 340, 599, 915, 1567, 1707, 1945, 1994, 2196
BseAI TCCGGA 1 cut(s) 1084
BseBI CCWGG 9 cut(s) 258, 920, 1227, 1674, 2102, 2129, 2353, 2518, 2539
BseDI CCNNGG 5 cut(s) 1225, 1235, 1274, 1315, 2128
BseGI GGATG 8 cut(s) 628, 753, 784, 1140, 1296, 1563, 2258, 2264
BseLI CCNNNNNNNGG 4 cut(s) 18, 537, 847, 2544
BseMII CTCAG 5 cut(s) 1281, 1659, 2453, 2576, 2597
BseNI ACTGG 8 cut(s) 340, 599, 915, 1567, 1707, 1945, 1994, 2196
BsePI GCGCGC 1 cut(s) 2524
BseRI GAGGAG 2 cut(s) 161, 1399
BseXI GCAGC 9 cut(s) 19, 47, 154, 488, 905, 914, 947, 1624, 2432
BseYI CCCAGC 1 cut(s) 1247
Bsh1236I CGCG 5 cut(s) 446, 878, 1713, 1887, 2526
Bsh1285I CGRYCG 1 cut(s) 450
BshFI GGCC 4 cut(s) 1425, 2152, 2264, 2516
BshNI GGYRCC 1 cut(s) 731
BsiEI CGRYCG 1 cut(s) 450
BsiHKAI GWGCWC 2 cut(s) 1084, 2024
BsiHKCI CYCGRG 2 cut(s) 281, 2543
BslFI GGGAC 1 cut(s) 299
BslI CCNNNNNNNGG 4 cut(s) 18, 537, 847, 2544
BsmAI GTCTC 5 cut(s) 366, 1182, 1286, 1560, 1759
BsmBI CGTCTC 1 cut(s) 1560
BsmFI GGGAC 1 cut(s) 299
BsmI GAATGC 2 cut(s) 169, 1138
BsnI GGCC 4 cut(s) 1425, 2152, 2264, 2516
Bso31I GGTCTC 2 cut(s) 1182, 1286
BsoBI CYCGRG 2 cut(s) 281, 2543
Bsp119I TTCGAA 1 cut(s) 2367
Bsp1286I GDGCHC 2 cut(s) 1084, 2024
Bsp13I TCCGGA 1 cut(s) 1084
Bsp1407I TGTACA 1 cut(s) 2280
Bsp1720I GCTNAGC 1 cut(s) 190
Bsp19I CCATGG 1 cut(s) 1235
Bsp68I TCGCGA 1 cut(s) 446
BspACI CCGC 7 cut(s) 531, 610, 878, 1174, 1375, 2244, 2521
BspANI GGCC 4 cut(s) 1425, 2152, 2264, 2516
BspCNI CTCAG 5 cut(s) 1282, 1660, 2452, 2577, 2598
BspEI TCCGGA 1 cut(s) 1084
BspFNI CGCG 5 cut(s) 446, 878, 1713, 1887, 2526
BspHI TCATGA 1 cut(s) 1866
BspLI GGNNCC 4 cut(s) 8, 78, 733, 1861
BspMAI CTGCAG 2 cut(s) 37, 791
BspMI ACCTGC 1 cut(s) 511
BspOI GCTAGC 1 cut(s) 1074
BspPI GGATC 5 cut(s) 192, 317, 953, 1262, 1890
BspQI GCTCTTC 1 cut(s) 1455
BspT104I TTCGAA 1 cut(s) 2367
BspT107I GGYRCC 1 cut(s) 731
BspTNI GGTCTC 2 cut(s) 1182, 1286
BsrBI CCGCTC 1 cut(s) 612
BsrFI RCCGGY 1 cut(s) 2264
BsrGI TGTACA 1 cut(s) 2280
BsrI ACTGG 8 cut(s) 340, 599, 915, 1567, 1707, 1945, 1994, 2196
BssAI RCCGGY 1 cut(s) 2264
BssECI CCNNGG 5 cut(s) 1225, 1235, 1274, 1315, 2128
BssHII GCGCGC 1 cut(s) 2524
BssSI CACGAG 1 cut(s) 972
BssT1I CCWWGG 2 cut(s) 1235, 1274
Bst2BI CACGAG 1 cut(s) 972
Bst2UI CCWGG 9 cut(s) 258, 920, 1227, 1674, 2102, 2129, 2353, 2518, 2539
Bst4CI ACNGT 6 cut(s) 682, 829, 1286, 1978, 2285, 2632
Bst6I CTCTTC 3 cut(s) 756, 1417, 1455
BstAPI GCANNNNNTGC 3 cut(s) 164, 1000, 1646
BstAUI TGTACA 1 cut(s) 2280
BstBI TTCGAA 1 cut(s) 2367
BstC8I GCNNGC 5 cut(s) 954, 979, 1072, 2489, 2526
BstDEI CTNAG 8 cut(s) 190, 212, 1215, 1290, 1668, 2439, 2585, 2606
BstDSI CCRYGG 1 cut(s) 1235
BstENI CCTNNNNNAGG 1 cut(s) 845
BstF5I GGATG 8 cut(s) 628, 753, 784, 1140, 1296, 1563, 2258, 2264
BstFNI CGCG 5 cut(s) 446, 878, 1713, 1887, 2526
BstH2I RGCGCY 2 cut(s) 226, 1310
BstHHI GCGC 6 cut(s) 225, 1309, 1715, 2174, 2526, 2528
BstMAI GTCTC 5 cut(s) 366, 1182, 1286, 1560, 1759
BstMCI CGRYCG 1 cut(s) 450
BstNI CCWGG 9 cut(s) 258, 920, 1227, 1674, 2102, 2129, 2353, 2518, 2539
BstNSI RCATGY 2 cut(s) 1402, 2573
BstSFI CTRYAG 2 cut(s) 33, 787
BstUI CGCG 5 cut(s) 446, 878, 1713, 1887, 2526
BstV1I GCAGC 9 cut(s) 19, 47, 154, 488, 905, 914, 947, 1624, 2432
BstV2I GAAGAC 2 cut(s) 386, 1489
BstX2I RGATCY 3 cut(s) 322, 862, 1099
BstYI RGATCY 3 cut(s) 322, 862, 1099
BsuI GTATCC 1 cut(s) 2424
BsuRI GGCC 4 cut(s) 1425, 2152, 2264, 2516
BtgI CCRYGG 1 cut(s) 1235
BtrI CACGTC 1 cut(s) 1549
BtsCI GGATG 8 cut(s) 628, 753, 784, 1140, 1296, 1563, 2258, 2264
BtsI GCAGTG 2 cut(s) 796, 1623
BtsIMutI CAGTG 7 cut(s) 495, 796, 825, 1291, 1623, 1699, 2004
BtuMI TCGCGA 1 cut(s) 446
BveI ACCTGC 1 cut(s) 511
Cac8I GCNNGC 5 cut(s) 954, 979, 1072, 2489, 2526
CaiI CAGNNNCTG 1 cut(s) 1637
CciI TCATGA 1 cut(s) 1866
CfoI GCGC 6 cut(s) 225, 1309, 1715, 2174, 2526, 2528
Cfr10I RCCGGY 1 cut(s) 2264
Cfr13I GGNCC 6 cut(s) 77, 1232, 2151, 2262, 2481, 2602
CseI GACGC 2 cut(s) 884, 932
CsiI ACCWGGT 1 cut(s) 256
Csp6I GTAC 8 cut(s) 254, 524, 602, 1026, 1402, 1513, 2281, 2582
CviQI GTAC 8 cut(s) 254, 524, 602, 1026, 1402, 1513, 2281, 2582
DdeI CTNAG 8 cut(s) 190, 212, 1215, 1290, 1668, 2439, 2585, 2606
DraI TTTAAA 1 cut(s) 1593
DrdI GACNNNNNNGTC 1 cut(s) 2609
DseDI GACNNNNNNGTC 1 cut(s) 2609
Eam1104I CTCTTC 3 cut(s) 756, 1417, 1455
EarI CTCTTC 3 cut(s) 756, 1417, 1455
Ecl136II GAGCTC 1 cut(s) 1082
Eco130I CCWWGG 2 cut(s) 1235, 1274
Eco24I GRGCYC 1 cut(s) 1084
Eco31I GGTCTC 2 cut(s) 1182, 1286
Eco47I GGWCC 4 cut(s) 77, 1232, 2481, 2602
Eco47III AGCGCT 1 cut(s) 1308
Eco53kI GAGCTC 1 cut(s) 1082
Eco57I CTGAAG 1 cut(s) 519
Eco88I CYCGRG 2 cut(s) 281, 2543
EcoICRI GAGCTC 1 cut(s) 1082
EcoNI CCTNNNNNAGG 1 cut(s) 845
EcoO109I RGGNCCY 1 cut(s) 77
EcoRI GAATTC 1 cut(s) 660
EcoRII CCWGG 9 cut(s) 256, 918, 1225, 1672, 2100, 2127, 2351, 2516, 2537
EcoT14I CCWWGG 2 cut(s) 1235, 1274
EcoT22I ATGCAT 3 cut(s) 244, 1140, 2338
EcoT38I GRGCYC 1 cut(s) 1084
ErhI CCWWGG 2 cut(s) 1235, 1274
Esp3I CGTCTC 1 cut(s) 1560
FalI AAGNNNNNCTT 2 cut(s) 1633, 1665
FaqI GGGAC 1 cut(s) 299
FbaI TGATCA 1 cut(s) 1345
FokI GGATG 8 cut(s) 635, 760, 791, 1147, 1283, 1570, 2265, 2271
FriOI GRGCYC 1 cut(s) 1084
FspBI CTAG 7 cut(s) 365, 842, 866, 906, 1071, 1097, 2388
GlaI GCGC 6 cut(s) 224, 1308, 1714, 2173, 2525, 2527
GsaI CCCAGC 1 cut(s) 1251
GsuI CTGGAG 3 cut(s) 932, 1248, 1584
HaeII RGCGCY 2 cut(s) 226, 1310
HaeIII GGCC 4 cut(s) 1425, 2152, 2264, 2516
HgaI GACGC 2 cut(s) 884, 932
HhaI GCGC 6 cut(s) 225, 1309, 1715, 2174, 2526, 2528
Hin6I GCGC 6 cut(s) 223, 1307, 1713, 2172, 2524, 2526
HinP1I GCGC 6 cut(s) 223, 1307, 1713, 2172, 2524, 2526
HincII GTYRAC 2 cut(s) 337, 457
HindII GTYRAC 2 cut(s) 337, 457
HindIII AAGCTT 1 cut(s) 2446
HpaI GTTAAC 1 cut(s) 457
HphI GGTGA 6 cut(s) 83, 272, 364, 398, 1355, 1696
Hpy166II GTNNAC 5 cut(s) 337, 457, 490, 1018, 1576
Hpy8I GTNNAC 5 cut(s) 337, 457, 490, 1018, 1576
Hpy99I CGWCG 2 cut(s) 133, 1553
HpyAV CCTTC 9 cut(s) 311, 465, 647, 1015, 1046, 1125, 1468, 2035, 2401
HpyCH4III ACNGT 6 cut(s) 682, 829, 1286, 1978, 2285, 2632
HpyCH4IV ACGT 2 cut(s) 410, 1548
HpyF3I CTNAG 8 cut(s) 190, 212, 1215, 1290, 1668, 2439, 2585, 2606
HpySE526I ACGT 2 cut(s) 410, 1548
HspAI GCGC 6 cut(s) 223, 1307, 1713, 2172, 2524, 2526
Kpn2I TCCGGA 1 cut(s) 1084
Ksp22I TGATCA 1 cut(s) 1345
KspAI GTTAAC 1 cut(s) 457
LguI GCTCTTC 1 cut(s) 1455
LmnI GCTCC 4 cut(s) 199, 1079, 1087, 1588
Lsp1109I GCAGC 9 cut(s) 19, 47, 154, 488, 905, 914, 947, 1624, 2432
LweI GCATC 9 cut(s) 179, 229, 251, 292, 922, 1125, 1570, 1624, 2338
MabI ACCWGGT 1 cut(s) 256
MaeI CTAG 7 cut(s) 365, 842, 866, 906, 1071, 1097, 2388
MaeII ACGT 2 cut(s) 410, 1548
MaeIII GTNAC 6 cut(s) 260, 370, 691, 791, 1972, 2116
MbiI CCGCTC 1 cut(s) 612
MfeI CAATTG 2 cut(s) 756, 1356
MflI RGATCY 3 cut(s) 322, 862, 1099
MhlI GDGCHC 2 cut(s) 1084, 2024
MlyI GAGTC 3 cut(s) 368, 485, 1329
MmeI TCCRAC 1 cut(s) 1895
Mph1103I ATGCAT 3 cut(s) 244, 1140, 2338
MroI TCCGGA 1 cut(s) 1084
MroXI GAANNNNTTC 3 cut(s) 1092, 1449, 1648
MseI TTAA 7 cut(s) 276, 456, 650, 1311, 1592, 1664, 2316
MslI CAYNNNNRTG 4 cut(s) 590, 1046, 1284, 2114
MspA1I CMGCKG 2 cut(s) 38, 2244
MunI CAATTG 2 cut(s) 756, 1356
Mva1269I GAATGC 2 cut(s) 169, 1138
MvaI CCWGG 9 cut(s) 258, 920, 1227, 1674, 2102, 2129, 2353, 2518, 2539
MvnI CGCG 5 cut(s) 446, 878, 1713, 1887, 2526
NciI CCSGG 2 cut(s) 1109, 2154
NcoI CCATGG 1 cut(s) 1235
NheI GCTAGC 1 cut(s) 1070
NlaIV GGNNCC 4 cut(s) 8, 78, 733, 1861
NmuCI GTSAC 5 cut(s) 260, 370, 691, 791, 2116
NruI TCGCGA 1 cut(s) 446
NsiI ATGCAT 3 cut(s) 244, 1140, 2338
NspI RCATGY 2 cut(s) 1402, 2573
NspV TTCGAA 1 cut(s) 2367
PagI TCATGA 1 cut(s) 1866
PauI GCGCGC 1 cut(s) 2524
PciI ACATGT 2 cut(s) 1398, 2569
PciSI GCTCTTC 1 cut(s) 1455
PcsI WCGNNNNNNNCGW 1 cut(s) 1575
PctI GAATGC 2 cut(s) 169, 1138
PdmI GAANNNNTTC 3 cut(s) 1092, 1449, 1648
PfeI GAWTC 7 cut(s) 574, 627, 817, 1093, 1625, 2356, 2576
PleI GAGTC 3 cut(s) 367, 485, 1328
PpsI GAGTC 3 cut(s) 367, 485, 1328
PpuMI RGGWCCY 1 cut(s) 77
PscI ACATGT 2 cut(s) 1398, 2569
Psp124BI GAGCTC 1 cut(s) 1084
Psp5II RGGWCCY 1 cut(s) 77
Psp6I CCWGG 9 cut(s) 256, 918, 1225, 1672, 2100, 2127, 2351, 2516, 2537
PspFI CCCAGC 1 cut(s) 1247
PspGI CCWGG 9 cut(s) 256, 918, 1225, 1672, 2100, 2127, 2351, 2516, 2537
PspN4I GGNNCC 4 cut(s) 8, 78, 733, 1861
PspPI GGNCC 6 cut(s) 77, 1232, 2151, 2262, 2481, 2602
PspPPI RGGWCCY 1 cut(s) 77
PstI CTGCAG 2 cut(s) 37, 791
PstNI CAGNNNCTG 1 cut(s) 1637
PsuI RGATCY 3 cut(s) 322, 862, 1099
PteI GCGCGC 1 cut(s) 2524
PvuII CAGCTG 1 cut(s) 38
RruI TCGCGA 1 cut(s) 446
RsaI GTAC 8 cut(s) 255, 525, 603, 1027, 1403, 1514, 2282, 2583
RsaNI GTAC 8 cut(s) 254, 524, 602, 1026, 1402, 1513, 2281, 2582
RseI CAYNNNNRTG 4 cut(s) 590, 1046, 1284, 2114
SacI GAGCTC 1 cut(s) 1084
SapI GCTCTTC 1 cut(s) 1455
SaqAI TTAA 7 cut(s) 276, 456, 650, 1311, 1592, 1664, 2316
Sau96I GGNCC 6 cut(s) 77, 1232, 2151, 2262, 2481, 2602
SchI GAGTC 3 cut(s) 368, 485, 1329
SduI GDGCHC 2 cut(s) 1084, 2024
SexAI ACCWGGT 1 cut(s) 256
SfaNI GCATC 9 cut(s) 179, 229, 251, 292, 922, 1125, 1570, 1624, 2338
SfcI CTRYAG 2 cut(s) 33, 787
SfuI TTCGAA 1 cut(s) 2367
SinI GGWCC 4 cut(s) 77, 1232, 2481, 2602
SmiMI CAYNNNNRTG 4 cut(s) 590, 1046, 1284, 2114
SmlI CTYRAG 2 cut(s) 2144, 2591
SmoI CTYRAG 2 cut(s) 2144, 2591
SpeI ACTAGT 1 cut(s) 2387
SsiI CCGC 7 cut(s) 531, 610, 878, 1174, 1375, 2244, 2521
SspMI CTAG 7 cut(s) 365, 842, 866, 906, 1071, 1097, 2388
SstI GAGCTC 1 cut(s) 1084
StyI CCWWGG 2 cut(s) 1235, 1274
TaaI ACNGT 6 cut(s) 682, 829, 1286, 1978, 2285, 2632
TaiI ACGT 2 cut(s) 413, 1551
TaqI TCGA 6 cut(s) 128, 715, 846, 1142, 2045, 2367
TatI WGTACW 3 cut(s) 601, 2280, 2581
TauI GCSGC 3 cut(s) 1378, 2247, 2524
TfiI GAWTC 7 cut(s) 574, 627, 817, 1093, 1625, 2356, 2576
Tru1I TTAA 7 cut(s) 276, 456, 650, 1311, 1592, 1664, 2316
Tru9I TTAA 7 cut(s) 276, 456, 650, 1311, 1592, 1664, 2316
TscAI CASTG 7 cut(s) 502, 796, 832, 1291, 1623, 1699, 2011
TseFI GTSAC 5 cut(s) 260, 370, 691, 791, 2116
TseI GCWGC 9 cut(s) 32, 35, 167, 476, 893, 902, 935, 1637, 2420
Tsp45I GTSAC 5 cut(s) 260, 370, 691, 791, 2116
TspDTI ATGAA 7 cut(s) 130, 405, 1458, 1745, 1816, 2055, 2311
TspGWI ACGGA 3 cut(s) 1289, 1584, 1872
TspRI CASTG 7 cut(s) 502, 796, 832, 1291, 1623, 1699, 2011
VpaK11BI GGWCC 4 cut(s) 77, 1232, 2481, 2602
XagI CCTNNNNNAGG 1 cut(s) 845
XapI RAATTY 5 cut(s) 541, 660, 1154, 2318, 2596
XbaI TCTAGA 2 cut(s) 865, 1096
XceI RCATGY 2 cut(s) 1402, 2573
XmnI GAANNNNTTC 3 cut(s) 1092, 1449, 1648
XspI CTAG 7 cut(s) 365, 842, 866, 906, 1071, 1097, 2388
Zsp2I ATGCAT 3 cut(s) 244, 1140, 2338
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.