Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0009078

Physical Location & Seq

Genomic Coordinates Reverse (-)

6161870 .. 6165820

Gene Structure 3951 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G17920.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2064 bp

ATGGAGTTTCTCGGCGACAGTCAAAATCACGATAGCTCTGAAACAGAGAAGAAGAACAAGAAGAAGAAGCGATTTCACCGTCACACACCTCACCAGATCCAACGGCTTGAATCAACTTTCAATGAGTGTCAACATCCAGATGAGAAACAGAGGAACCAACTTAGTAGAGAGTTGGGTTTAGCTCCAAGACAGATCAAGTTCTGGTTTCAAAACAGAAGAACTCAAAAGAAGGCACAACACGAAAGAGCTGATAATTGTGCATTGAAAGAAGAGAATGATAAGATTCGATGCGAAAACATTGCTATTAGAGAAGCTATTAAACACGCCATTTGCCCCAGCTGTGGTGATTCTCCTGTTAATGAAGACTCTTACTTTGATGAGCAAAAGCTTCGCATCGAAAATGCACAGCTTAGAGATGAGCTCGAAAGGGTTTCGAGTATTGCAGCTAAATTCTTAGGAAGACCAATCTCCCATCTTCCACCATTACTAAATCCGATGCATGTTTCGCCATTAGAGTTATTCCATACCGGACCTTCACTTGATTTTGATCTTCTCCCAGGAAGTTGTTCTTCAATGTCTGTTCCAAGTTTACCATCTCAGCCAAACTTGGTTTTATCAGAGATGGATAAGTCTCTTATGACCAACATTGCTGTGACCGCTATGGAAGAATTGCTTAGGCTTCTTCAAACAAATGAGCCTCTGTGGATCAAAACTGATGGATGCAGAGATGTTCTCAATCTCGAAAACTATGAGAATATGTTTACAAGATCAAGTACTAGTGGTGGAAAGAAGAATAACCTTGGAATGGAAGCATCTAGATCTTCTGGTGTTGTTTTCACTAATGCTATTACACTTGTGGACATGCTTATGAACTCTGTCAAATTAACAGAGCTTTTTCCCTCGATCGTTGCATCATCTAAAACCCTTGCAGTGATTTCATCGGGATTGCGTGGAAACCATGGAGATGCATTGCATTTGATGATTGAAGAGCTTCAAGTGCTTTCACCATTGGTAACAACGCGTGAGTTCTGTGTGCTAAGATATTGTCAGCAAATCGAACATGGAACTTGGGCAATAGTAAATGTCTCATATGAGTTTCCTCAGTTTATATCTCAATCTCGGTCATATAGATTTCCTTCTGGTTGCTTGATCCAAGATATGTCCAATGGCTATTCAAAGGTTACTTGGGTGGAACATGGTGAATTCGAGGAGCAAGAACCGATACATGAGATGTTTAAAGATATAGTTCATAAAGGATTAGCTTTTGGAGCTGAACGTTGGATTGCTACTCTCCAAAGAATGTGTGAGAGATTCACGAATCTATTGGAACCTGCAACATCATCCCTTGATCTTGGAGGAGTGATTCCATCGCCAGAAGGGAAGAGAAGTATAATGAGACTTGCTCACAGAATGGTAAGCAACTTCTGCTTGAGTGTTGGCACATCTAACAACACTCGCTCAACGGTTGTCTCGGGACTGGATGAATTTGGAATCCGTGTGACTTCGCATAAGAGCAGACATGAACCAAATGGAATGGTTCTATGTGCAGCCACAAGTTTCTGGCTCCCTATTTCTCCACAAAACGTCTTCAATTTCCTCAAAGATGAGAGAACTCGGCCTCAGTGGGACGTTCTTTCAAATGGAAACTCTGTTCAAGAAGTTGCTCATATCACAAACGGATCAAATCCTGGAAACTGCATATCTGTTCTTCGTGGATTCAATGCATCATCATCACAAAACAACATGTTGATTCTACAAGAAAGCTGCATAGACTCATCAAGTGCAGCGCTTGTGATCTACACTCCAGTGGATCTACCAGCGTTGAACATAGCAATGAGTGGTCAAGACACATCTTATATTCCGATATTACCCTCAGGTTTTGCCATTTCACCAGACGGAAGCAGCAAAGGAGGAGGATCATTGATAACGGTTGGGTTTCAGATAATGGTGAGTGGTTTGCAACCGGCAAAACTGAACATGGAGTCAATGGAGACAGTAAATAATCTCATCAATACCACTGTCCACCAAATTAAAACGACCTTGAATTGTCCTTCAACTGCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000902 GO:0000904 GO:0000976 GO:0001067 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007275 GO:0008150 GO:0009653 GO:0009664 GO:0009791 GO:0009827 GO:0009828 GO:0009888 GO:0009889 GO:0009908 GO:0009987 GO:0010026 GO:0010090 GO:0010091 GO:0010468 GO:0010556 GO:0016043 GO:0019219 GO:0019222 GO:0022414 GO:0030154 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0032989 GO:0042545 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044212 GO:0044424 GO:0044464 GO:0045229 GO:0045595 GO:0045596 GO:0048367 GO:0048437 GO:0048468 GO:0048497 GO:0048519 GO:0048523 GO:0048608 GO:0048731 GO:0048856 GO:0048869 GO:0050789 GO:0050793 GO:0050794 GO:0051093 GO:0051171 GO:0051252 GO:0060255 GO:0061458 GO:0065007 GO:0071554 GO:0071555 GO:0071669 GO:0071840 GO:0080090 GO:0090558 GO:0090567 GO:0090626 GO:0090700 GO:0097159 GO:0099402 GO:0140110 GO:1901363 GO:1903506 GO:1990837 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Homeobox START

Protein Analysis

687

Amino Acids

76.53

Weight (kDa)

6.25

Isoelectric Point (pI)

51.17

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Homeodomain	PF00046	25 - 77	1.8e-17	Homeodomain
START	PF01852	216 - 437	1.9e-35	START domain
PDF2_C	PF25797	457 - 683	1.3e-92	PDF2-like, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009078)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G17920 AT1G17920 AT1G73360
fragaria_vesca	FvH4_5g18090 FvH4_5g18090
malus_domestica	MD06G1236400.v1.1 MD14G1243300.v1.1
prunus_persica	Prupe.5G240900_v2.0.a1
pyrus_communis	pycom06g21200 pycom06g21210 pycom14g20460 pycom15g33770
rosa_chinensis	RchiOBHm_Chr7g0177521
rosa_laevigata	RLG00000005530
rosa_multiflora	Rmu_ssc0000330.1_g000002
rosa_roxburghii	Rroxscaffold_3G00275800
rosa_rugosa	Rorug06G0407000
rosa_samantha	Rh7AG006300 Rh7BG006200 Rh7CG006700 Rh7DG006300
rosa_wichuraiana	Rw7G000520

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1339
AccII	CGCG	1 cut(s)	1021
AciI	CCGC	1 cut(s)	657
AclI	AACGTT	1 cut(s)	1276
AclWI	GGATC	6 cut(s)	91, 713, 1144, 1687, 1818, 1924
AcsI	RAATTY	3 cut(s)	449, 1202, 1484
AfaI	GTAC	1 cut(s)	775
AfeI	AGCGCT	1 cut(s)	1788
AfiI	CCNNNNNNNGG	2 cut(s)	341, 805
AflIII	ACRYGT	2 cut(s)	1019, 1743
AhlI	ACTAGT	1 cut(s)	776
AjnI	CCWGG	2 cut(s)	556, 1687
AleI	CACNNNNGTG	1 cut(s)	1805
AloI	GAACNNNNNNTCC	2 cut(s)	1635, 1667
Alw21I	GWGCWC	1 cut(s)	423
Alw26I	GTCTC	5 cut(s)	636, 1090, 1390, 1474, 1985
AlwI	GGATC	6 cut(s)	91, 713, 1144, 1687, 1818, 1924
Ama87I	CYCGRG	1 cut(s)	1471
Aor51HI	AGCGCT	1 cut(s)	1788
AoxI	GGCC	1 cut(s)	1616
ApeKI	GCWGC	5 cut(s)	443, 1547, 1764, 1784, 1902
ApoI	RAATTY	3 cut(s)	449, 1202, 1484
ArsI	GACNNNNNNTTYG	2 cut(s)	356, 388
Asp700I	GAANNNNTTC	2 cut(s)	565, 990
AspLEI	GCGC	1 cut(s)	1789
AspS9I	GGNCC	1 cut(s)	530
AsuHPI	GGTGA	7 cut(s)	68, 83, 356, 996, 1211, 1881, 1960
AvaI	CYCGRG	1 cut(s)	1471
AvaII	GGWCC	1 cut(s)	530
AxyI	CCTNAGG	1 cut(s)	1873
BanII	GRGCYC	1 cut(s)	423
BbsI	GAAGAC	3 cut(s)	369, 466, 1579
Bbv12I	GWGCWC	1 cut(s)	423
BbvI	GCAGC	5 cut(s)	455, 1559, 1751, 1796, 1914
BccI	CCATC	5 cut(s)	480, 601, 616, 710, 1375
BceAI	ACGGC	1 cut(s)	119
BcgI	CGANNNNNNTGC	4 cut(s)	281, 315, 371, 405
BciT130I	CCWGG	2 cut(s)	558, 1689
BcoDI	GTCTC	5 cut(s)	636, 1090, 1390, 1474, 1985
BcuI	ACTAGT	1 cut(s)	776
BfaI	CTAG	2 cut(s)	777, 816
BfoI	RGCGCY	1 cut(s)	1790
BfuAI	ACCTGC	1 cut(s)	1339
BglII	AGATCT	1 cut(s)	818
BisI	GCNGC	5 cut(s)	444, 1548, 1765, 1785, 1903
BlsI	GCNGC	5 cut(s)	445, 1549, 1766, 1786, 1904
BmcAI	AGTACT	1 cut(s)	775
Bme1390I	CCNGG	2 cut(s)	558, 1689
Bme18I	GGWCC	1 cut(s)	530
BmeT110I	CYCGRG	1 cut(s)	1471
BmgT120I	GGNCC	1 cut(s)	530
BmiI	GGNNCC	3 cut(s)	155, 1329, 1565
BmrFI	CCNGG	2 cut(s)	558, 1689
BmsI	GCATC	8 cut(s)	278, 402, 486, 710, 821, 920, 955, 1733
BpiI	GAAGAC	3 cut(s)	369, 466, 1579
BplI	GAGNNNNNCTC	6 cut(s)	405, 437, 717, 749, 1387, 1419
BpmI	CTGGAG	1 cut(s)	1788
Bpu10I	CCTNAGC	1 cut(s)	674
BpuEI	CTTGAG	1 cut(s)	1450
BsaBI	GATNNNNATC	1 cut(s)	546
BsaJI	CCNNGG	3 cut(s)	556, 799, 958
BsaWI	WCCGGW	1 cut(s)	527
Bsc4I	CCNNNNNNNGG	2 cut(s)	341, 805
Bse118I	RCCGGY	1 cut(s)	1963
Bse1I	ACTGG	2 cut(s)	1482, 1805
Bse21I	CCTNAGG	1 cut(s)	1873
Bse3DI	GCAATG	4 cut(s)	297, 645, 968, 1839
Bse8I	GATNNNNATC	1 cut(s)	546
BseBI	CCWGG	2 cut(s)	558, 1689
BseDI	CCNNGG	3 cut(s)	556, 799, 958
BseGI	GGATG	4 cut(s)	133, 725, 1340, 1486
BseJI	GATNNNNATC	1 cut(s)	546
BseLI	CCNNNNNNNGG	2 cut(s)	341, 805
BseMI	GCAATG	4 cut(s)	297, 645, 968, 1839
BseMII	CTCAG	4 cut(s)	611, 1115, 1634, 1887
BseNI	ACTGG	2 cut(s)	1482, 1805
BseRI	GAGGAG	3 cut(s)	1223, 1371, 1926
BseXI	GCAGC	5 cut(s)	455, 1559, 1751, 1796, 1914
BseYI	CCCAGC	1 cut(s)	335
BsgI	GTGCAG	2 cut(s)	1566, 1803
Bsh1236I	CGCG	1 cut(s)	1021
Bsh1285I	CGRYCG	1 cut(s)	906
BshFI	GGCC	1 cut(s)	1618
BsiEI	CGRYCG	1 cut(s)	906
BsiHKAI	GWGCWC	1 cut(s)	423
BsiHKCI	CYCGRG	1 cut(s)	1471
BsiSI	CCGG	2 cut(s)	528, 1964
BslFI	GGGAC	2 cut(s)	1488, 1640
BslI	CCNNNNNNNGG	2 cut(s)	341, 805
BsmAI	GTCTC	5 cut(s)	636, 1090, 1390, 1474, 1985
BsmFI	GGGAC	2 cut(s)	1488, 1640
BsnI	GGCC	1 cut(s)	1618
BsoBI	CYCGRG	1 cut(s)	1471
Bsp1286I	GDGCHC	1 cut(s)	423
Bsp19I	CCATGG	1 cut(s)	958
BspACI	CCGC	1 cut(s)	657
BspANI	GGCC	1 cut(s)	1618
BspCNI	CTCAG	4 cut(s)	610, 1114, 1633, 1886
BspFNI	CGCG	1 cut(s)	1021
BspLI	GGNNCC	3 cut(s)	155, 1329, 1565
BspMI	ACCTGC	1 cut(s)	1339
BspPI	GGATC	6 cut(s)	91, 713, 1144, 1687, 1818, 1924
BspQI	GCTCTTC	1 cut(s)	981
BsrDI	GCAATG	4 cut(s)	297, 645, 968, 1839
BsrFI	RCCGGY	1 cut(s)	1963
BsrI	ACTGG	2 cut(s)	1482, 1805
BssAI	RCCGGY	1 cut(s)	1963
BssECI	CCNNGG	3 cut(s)	556, 799, 958
BssT1I	CCWWGG	2 cut(s)	799, 958
Bst2UI	CCWGG	2 cut(s)	558, 1689
Bst4CI	ACNGT	6 cut(s)	20, 80, 1465, 1930, 1996, 2020
Bst6I	CTCTTC	3 cut(s)	264, 981, 1376
BstAPI	GCANNNNNTGC	1 cut(s)	1425
BstDEI	CTNAG	9 cut(s)	161, 410, 454, 597, 674, 1037, 1101, 1620, 1873
BstDSI	CCRYGG	1 cut(s)	958
BstF5I	GGATG	4 cut(s)	133, 725, 1340, 1486
BstFNI	CGCG	1 cut(s)	1021
BstH2I	RGCGCY	1 cut(s)	1790
BstHHI	GCGC	1 cut(s)	1789
BstMAI	GTCTC	5 cut(s)	636, 1090, 1390, 1474, 1985
BstMCI	CGRYCG	1 cut(s)	906
BstMWI	GCNNNNNNNGC	5 cut(s)	505, 656, 997, 1268, 1425
BstNI	CCWGG	2 cut(s)	558, 1689
BstNSI	RCATGY	3 cut(s)	503, 865, 1747
BstSCI	CCNGG	2 cut(s)	556, 1687
BstUI	CGCG	1 cut(s)	1021
BstV1I	GCAGC	5 cut(s)	455, 1559, 1751, 1796, 1914
BstV2I	GAAGAC	3 cut(s)	369, 466, 1579
BstX2I	RGATCY	3 cut(s)	96, 818, 1810
BstYI	RGATCY	3 cut(s)	96, 818, 1810
Bsu36I	CCTNAGG	1 cut(s)	1873
BsuRI	GGCC	1 cut(s)	1618
BtgI	CCRYGG	1 cut(s)	958
BtgZI	GCGATG	1 cut(s)	1353
BtsCI	GGATG	4 cut(s)	133, 725, 1340, 1486
BtsI	GCAGTG	1 cut(s)	936
BtsIMutI	CAGTG	4 cut(s)	936, 1628, 1812, 2016
BveI	ACCTGC	1 cut(s)	1339
CfoI	GCGC	1 cut(s)	1789
Cfr10I	RCCGGY	1 cut(s)	1963
Cfr13I	GGNCC	1 cut(s)	530
Csp6I	GTAC	1 cut(s)	774
CviAII	CATG	9 cut(s)	500, 862, 959, 1061, 1196, 1226, 1520, 1744, 1978
CviQI	GTAC	1 cut(s)	774
DdeI	CTNAG	9 cut(s)	161, 410, 454, 597, 674, 1037, 1101, 1620, 1873
DraI	TTTAAA	1 cut(s)	1237
Eam1104I	CTCTTC	3 cut(s)	264, 981, 1376
EarI	CTCTTC	3 cut(s)	264, 981, 1376
Ecl136II	GAGCTC	1 cut(s)	421
Eco130I	CCWWGG	2 cut(s)	799, 958
Eco24I	GRGCYC	1 cut(s)	423
Eco47I	GGWCC	1 cut(s)	530
Eco47III	AGCGCT	1 cut(s)	1788
Eco53kI	GAGCTC	1 cut(s)	421
Eco81I	CCTNAGG	1 cut(s)	1873
Eco88I	CYCGRG	1 cut(s)	1471
EcoICRI	GAGCTC	1 cut(s)	421
EcoRI	GAATTC	1 cut(s)	1202
EcoRII	CCWGG	2 cut(s)	556, 1687
EcoT14I	CCWWGG	2 cut(s)	799, 958
EcoT22I	ATGCAT	3 cut(s)	501, 970, 1726
EcoT38I	GRGCYC	1 cut(s)	423
ErhI	CCWWGG	2 cut(s)	799, 958
FaeI	CATG	9 cut(s)	503, 865, 962, 1064, 1199, 1229, 1523, 1747, 1981
FalI	AAGNNNNNCTT	4 cut(s)	553, 585, 657, 689
FaqI	GGGAC	2 cut(s)	1488, 1640
FatI	CATG	9 cut(s)	499, 861, 958, 1060, 1195, 1225, 1519, 1743, 1977
FauNDI	CATATG	1 cut(s)	1090
Fnu4HI	GCNGC	5 cut(s)	444, 1548, 1765, 1785, 1903
FokI	GGATG	4 cut(s)	120, 732, 1327, 1493
FriOI	GRGCYC	1 cut(s)	423
Fsp4HI	GCNGC	5 cut(s)	444, 1548, 1765, 1785, 1903
FspBI	CTAG	2 cut(s)	777, 816
GlaI	GCGC	1 cut(s)	1788
GluI	GCNGC	5 cut(s)	444, 1548, 1765, 1785, 1903
GsaI	CCCAGC	1 cut(s)	339
GsuI	CTGGAG	1 cut(s)	1788
HaeII	RGCGCY	1 cut(s)	1790
HaeIII	GGCC	1 cut(s)	1618
HapII	CCGG	2 cut(s)	528, 1964
HhaI	GCGC	1 cut(s)	1789
Hin1II	CATG	9 cut(s)	503, 865, 962, 1064, 1199, 1229, 1523, 1747, 1981
Hin6I	GCGC	1 cut(s)	1787
HinP1I	GCGC	1 cut(s)	1787
HincII	GTYRAC	1 cut(s)	131
HindII	GTYRAC	1 cut(s)	131
HindIII	AAGCTT	1 cut(s)	386
HpaII	CCGG	2 cut(s)	528, 1964
HphI	GGTGA	7 cut(s)	68, 83, 356, 996, 1211, 1881, 1960
Hpy166II	GTNNAC	5 cut(s)	131, 590, 762, 859, 2023
Hpy188I	TCNGA	5 cut(s)	40, 495, 619, 1863, 1941
Hpy188III	TCNNGA	9 cut(s)	29, 137, 740, 816, 942, 1315, 1473, 1655, 1844
Hpy8I	GTNNAC	5 cut(s)	131, 590, 762, 859, 2023
HpyAV	CCTTC	5 cut(s)	223, 543, 1146, 1370, 2061
HpyCH4III	ACNGT	6 cut(s)	20, 80, 1465, 1930, 1996, 2020
HpyCH4IV	ACGT	3 cut(s)	1276, 1584, 1629
HpyF10VI	GCNNNNNNNGC	5 cut(s)	505, 656, 997, 1268, 1425
HpyF3I	CTNAG	9 cut(s)	161, 410, 454, 597, 674, 1037, 1101, 1620, 1873
HpySE526I	ACGT	3 cut(s)	1276, 1584, 1629
Hsp92II	CATG	9 cut(s)	503, 865, 962, 1064, 1199, 1229, 1523, 1747, 1981
HspAI	GCGC	1 cut(s)	1787
LguI	GCTCTTC	1 cut(s)	981
LmnI	GCTCC	4 cut(s)	187, 1210, 1268, 1569
Lsp1109I	GCAGC	5 cut(s)	455, 1559, 1751, 1796, 1914
LweI	GCATC	8 cut(s)	278, 402, 486, 710, 821, 920, 955, 1733
MaeI	CTAG	2 cut(s)	777, 816
MaeII	ACGT	3 cut(s)	1276, 1584, 1629
MaeIII	GTNAC	5 cut(s)	80, 652, 1012, 1180, 1498
MflI	RGATCY	3 cut(s)	96, 818, 1810
MhlI	GDGCHC	1 cut(s)	423
MluCI	AATT	9 cut(s)	253, 449, 668, 881, 1202, 1484, 1591, 2028, 2044
MluI	ACGCGT	1 cut(s)	1019
MlyI	GAGTC	3 cut(s)	359, 1766, 1991
MmeI	TCCRAC	2 cut(s)	124, 1259
Mph1103I	ATGCAT	3 cut(s)	501, 970, 1726
MroXI	GAANNNNTTC	2 cut(s)	565, 990
MseI	TTAA	5 cut(s)	318, 357, 884, 1236, 2031
MslI	CAYNNNNRTG	6 cut(s)	138, 650, 866, 963, 1805, 1832
MspA1I	CMGCKG	1 cut(s)	339
MspI	CCGG	2 cut(s)	528, 1964
MspR9I	CCNGG	2 cut(s)	558, 1689
MvaI	CCWGG	2 cut(s)	558, 1689
MvnI	CGCG	1 cut(s)	1021
MwoI	GCNNNNNNNGC	5 cut(s)	505, 656, 997, 1268, 1425
NcoI	CCATGG	1 cut(s)	958
NdeI	CATATG	1 cut(s)	1090
NlaIII	CATG	9 cut(s)	503, 865, 962, 1064, 1199, 1229, 1523, 1747, 1981
NlaIV	GGNNCC	3 cut(s)	155, 1329, 1565
NmeAIII	GCCGAG	1 cut(s)	1594
NmuCI	GTSAC	3 cut(s)	80, 652, 1498
NsiI	ATGCAT	3 cut(s)	501, 970, 1726
NspI	RCATGY	3 cut(s)	503, 865, 1747
OliI	CACNNNNGTG	1 cut(s)	1805
PciI	ACATGT	1 cut(s)	1743
PciSI	GCTCTTC	1 cut(s)	981
PdmI	GAANNNNTTC	2 cut(s)	565, 990
PfeI	GAWTC	9 cut(s)	110, 283, 347, 1311, 1318, 1363, 1491, 1716, 1750
PfoI	TCCNGGA	1 cut(s)	1687
PkrI	GCNGC	5 cut(s)	445, 1549, 1766, 1786, 1904
Ple19I	CGATCG	1 cut(s)	906
PleI	GAGTC	3 cut(s)	359, 1766, 1990
PpsI	GAGTC	3 cut(s)	359, 1766, 1990
PscI	ACATGT	1 cut(s)	1743
Psp124BI	GAGCTC	1 cut(s)	423
Psp1406I	AACGTT	1 cut(s)	1276
Psp6I	CCWGG	2 cut(s)	556, 1687
PspFI	CCCAGC	1 cut(s)	335
PspGI	CCWGG	2 cut(s)	556, 1687
PspN4I	GGNNCC	3 cut(s)	155, 1329, 1565
PspPI	GGNCC	1 cut(s)	530
PsuI	RGATCY	3 cut(s)	96, 818, 1810
PvuI	CGATCG	1 cut(s)	906
PvuII	CAGCTG	1 cut(s)	339
RsaI	GTAC	1 cut(s)	775
RsaNI	GTAC	1 cut(s)	774
RseI	CAYNNNNRTG	6 cut(s)	138, 650, 866, 963, 1805, 1832
SacI	GAGCTC	1 cut(s)	423
SapI	GCTCTTC	1 cut(s)	981
SaqAI	TTAA	5 cut(s)	318, 357, 884, 1236, 2031
SatI	GCNGC	5 cut(s)	444, 1548, 1765, 1785, 1903
Sau96I	GGNCC	1 cut(s)	530
ScaI	AGTACT	1 cut(s)	775
SchI	GAGTC	3 cut(s)	359, 1766, 1991
ScrFI	CCNGG	2 cut(s)	558, 1689
SduI	GDGCHC	1 cut(s)	423
SfaNI	GCATC	8 cut(s)	278, 402, 486, 710, 821, 920, 955, 1733
SinI	GGWCC	1 cut(s)	530
SmiMI	CAYNNNNRTG	6 cut(s)	138, 650, 866, 963, 1805, 1832
SmlI	CTYRAG	1 cut(s)	1429
SmoI	CTYRAG	1 cut(s)	1429
SpeI	ACTAGT	1 cut(s)	776
Sse9I	AATT	9 cut(s)	253, 449, 668, 881, 1202, 1484, 1591, 2028, 2044
SsiI	CCGC	1 cut(s)	657
SspMI	CTAG	2 cut(s)	777, 816
SstI	GAGCTC	1 cut(s)	423
StyD4I	CCNGG	2 cut(s)	556, 1687
StyI	CCWWGG	2 cut(s)	799, 958
TaaI	ACNGT	6 cut(s)	20, 80, 1465, 1930, 1996, 2020
TaiI	ACGT	3 cut(s)	1279, 1587, 1632
TaqI	TCGA	8 cut(s)	286, 396, 423, 434, 741, 902, 1056, 1206
TaqII	GACCGA	1 cut(s)	1110
TasI	AATT	9 cut(s)	253, 449, 668, 881, 1202, 1484, 1591, 2028, 2044
TatI	WGTACW	1 cut(s)	773
TfiI	GAWTC	9 cut(s)	110, 283, 347, 1311, 1318, 1363, 1491, 1716, 1750
Tru1I	TTAA	5 cut(s)	318, 357, 884, 1236, 2031
Tru9I	TTAA	5 cut(s)	318, 357, 884, 1236, 2031
TscAI	CASTG	4 cut(s)	936, 1628, 1812, 2023
TseFI	GTSAC	3 cut(s)	80, 652, 1498
TseI	GCWGC	5 cut(s)	443, 1547, 1764, 1784, 1902
Tsp45I	GTSAC	3 cut(s)	80, 652, 1498
TspDTI	ATGAA	6 cut(s)	375, 884, 927, 1238, 1497, 1536
TspGWI	ACGGA	3 cut(s)	1484, 1692, 1911
TspRI	CASTG	4 cut(s)	936, 1628, 1812, 2023
VpaK11BI	GGWCC	1 cut(s)	530
XapI	RAATTY	3 cut(s)	449, 1202, 1484
XbaI	TCTAGA	1 cut(s)	815
XceI	RCATGY	3 cut(s)	503, 865, 1747
XmnI	GAANNNNTTC	2 cut(s)	565, 990
XspI	CTAG	2 cut(s)	777, 816
ZrmI	AGTACT	1 cut(s)	775
Zsp2I	ATGCAT	3 cut(s)	501, 970, 1726

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.