Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr14

Orthogroup ID

OG0009078

Physical Location & Seq

Genomic Coordinates Forward (+)

32184593 .. 32188605

Gene Structure 4013 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD14G1243300.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2130 bp

ATGGAGTACGGCAGCGGACGCGGTGGCTCTAGTGGCGGAGACCACCACGACGACTCCTCCGGCTCTCAAAGAAGGAAGAAGCGCTACCACCGTCACACTGCTCACCAGATTCAGAGGCTTGAAGGAATGTATAAGGAGTGCCCTCACCCGGATGAAAAGCAGAGGATGCAGTTGAGCAGAGAGTTGGGTTTGGCTCCTCGCCAGATAAAATTTTGGTTTCAAAACCGCAGGACCCAGATGAAGGCGCAAAACGAAAGATCGGACAACTGCGCACTTCGAGCAGAGAACGACAAGATCCGATGCGAAAACATTGCAATCAGAGAGGCCCTCAAGAATGTCATTTGCCCCTCTTGCGGTGTACCTCCACTCAACGAAGATTCCTACTTTGATGAACAGAAATTGCGAATGGAGAATGCCCAATTGAAACAAGAGCTAGATAGAGTGTCTAGTATTGCTGCAAAATACATTGGGAGGCCAATTTCCCAGCTCCCACCAGTGCAGCCTATTCATATTTCGTCTTTGGACTTATCAATGGCAAGTTTTGGGGGCCATGGATTGGCTGGCCCTTCTCTTGATCTTGATCTACTTCCGGGGAGTGCTTTATCTACCATGCCCAATTTGCCTTACCAGCCTCCTGGGTTTTCGGACATGGATAAGTCCCTCATGACTGACATTGCCGCAAATGCCATGGCAGAGTTGCTTAGGCTTCTGCAGACCAATGATCCTTTGTGGATGAAGTCTTCTACTGATGGGAGGGATGTTCTTAATCTTGAATCCTATGAGAGGATTTTTCCGAGGGCTACTAGTCATTCGAAAAACCCCTATGTCAGAATTGAAGCATCACGAGATTCTGGTGTGGTTATCATGAGTGGTTTAGCATTAGTTGACATGTTTATTGACCTGAACAAATTTGCGGAGCTGTTTCCAACAATTGTCTCAATGGCAAGAACAATCGAAGTAATATCACCTGGAATGTTGGGTGGTCATGGCTCTTTGCAGTTGATGTACAACGAGTTGCAAGTGCTTTCGCCATTGGTACCAACTCGGGAGTTCTACTTCCTTCGTTATTGTCAGCAAATCGAGCAAGGCCTGTGGGCAATTGTCGATGTCTCTTACGATTTTCCACAAGATAATCAGTTTGCAAACCAATGTCGATCTCATAGGCTTCCTTCTGGGTGCTTGATTCAAGACATGCCAAATGGATATTCCAAGGTTACTTGGGTGGAACATGTGGAAATAGAAGACAAAGTTCCAACTCATCGGATTTATAGAGATCTTATTCACAGCGGATTAGCATTTGGAGCTCAACGATGGCTTGCTGCTCTGCAGAGAATGTGTGAAAGATTTGCGTGTCTAATGGTTTCAGGCACTTATACTAGAGATCTTGAAGGAGTGATTCCATCGCCCCAAGGAAAGAGGAGCATGATGAAACTTGCACAAAGGATGGTGAACAACTTCTGCGCAAACATTAGTGCATCCAACGGACATAGATGGACCACCCTTTCTGGGATGGACGAGATTGGAGTCCGAGTCGCTATCCATAAGAGCACCGATCCTGGTCAACCAAACGGTGTGGTTCTTAGTGCAGGTACTACCATTTGGCTCCCATTATCGCCACAGAATGTCTTCAATTTTTTCAAGGATGAAAGAACTCGACCTCAGTGGGATGTGCTTTCAAATGGCAATGCAGTGCAAGATGTTGCCCATATAGCAAATGGTTCACATCCAGGGAACTGTATATCTGTTCTTCGAGCGTTCAACACTAACCAGAACAACATGTTGATACTCCAAGAGAGCTGCATAGACTCATCAGGCTCACTTGTTGTGTACTCTCCTATTGACCTACCGGCCATCAACATTGCAATGAGCGGTGAGGATTCTTCCTACATTCCCCTCCTGCCATCAGGATTCACCATTTCGCCAGATGGGCGAGCAGATCAAGGGGATGGCGCCTCATCAAGTTCTTGCAATGCAAATGGGAGTGGATCACTAGTCACAGTGGCATTACAAATTCTGGTGAGCAGCTTGCCATCCGCTAAGCTGAACTTGGAGTCGGTAAATACCGTTAATAACCTAATCGGAACAACTGTCCAGCAAATTAAGACAGCCTTGAATTGCAATAGTTCCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000902 GO:0000904 GO:0000976 GO:0001067 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007275 GO:0008150 GO:0009653 GO:0009664 GO:0009791 GO:0009827 GO:0009828 GO:0009888 GO:0009889 GO:0009908 GO:0009987 GO:0010026 GO:0010090 GO:0010091 GO:0010468 GO:0010556 GO:0016043 GO:0019219 GO:0019222 GO:0022414 GO:0030154 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0032989 GO:0042545 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044212 GO:0044424 GO:0044464 GO:0045229 GO:0045595 GO:0045596 GO:0048367 GO:0048437 GO:0048468 GO:0048497 GO:0048519 GO:0048523 GO:0048608 GO:0048731 GO:0048856 GO:0048869 GO:0050789 GO:0050793 GO:0050794 GO:0051093 GO:0051171 GO:0051252 GO:0060255 GO:0061458 GO:0065007 GO:0071554 GO:0071555 GO:0071669 GO:0071840 GO:0080090 GO:0090558 GO:0090567 GO:0090626 GO:0090700 GO:0097159 GO:0099402 GO:0140110 GO:1901363 GO:1903506 GO:1990837 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Homeobox START

Protein Analysis

710

Amino Acids

78.36

Weight (kDa)

6.42

Isoelectric Point (pI)

51.89

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Homeodomain	PF00046	26 - 81	1.1e-18	Homeodomain
START	PF01852	225 - 448	5.5e-46	START domain
PDF2_C	PF25797	468 - 706	1.5e-108	PDF2-like, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009078)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G17920 AT1G17920 AT1G73360
fragaria_vesca	FvH4_5g18090 FvH4_5g18090
malus_domestica	MD06G1236400.v1.1 MD14G1243300.v1.1
prunus_persica	Prupe.5G240900_v2.0.a1
pyrus_communis	pycom06g21200 pycom06g21210 pycom14g20460 pycom15g33770
rosa_chinensis	RchiOBHm_Chr7g0177521
rosa_laevigata	RLG00000005530
rosa_multiflora	Rmu_ssc0000330.1_g000002
rosa_roxburghii	Rroxscaffold_3G00275800
rosa_rugosa	Rorug06G0407000
rosa_samantha	Rh7AG006300 Rh7BG006200 Rh7CG006700 Rh7DG006300
rosa_wichuraiana	Rw7G000520

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	2 cut(s)	271, 1462
Acc36I	ACCTGC	1 cut(s)	1577
Acc65I	GGTACC	1 cut(s)	1036
AccB1I	GGYRCC	2 cut(s)	1036, 1949
AccB7I	CCANNNNNTGG	1 cut(s)	556
AccBSI	CCGCTC	1 cut(s)	1869
AccII	CGCG	1 cut(s)	21
AclWI	GGATC	4 cut(s)	289, 716, 1547, 1993
AcoI	YGGCCR	1 cut(s)	1848
AcsI	RAATTY	3 cut(s)	209, 908, 2010
AcyI	GRCGYC	1 cut(s)	1950
AfaI	GTAC	6 cut(s)	8, 360, 1007, 1038, 1591, 1829
AfeI	AGCGCT	1 cut(s)	83
AfiI	CCNNNNNNNGG	6 cut(s)	148, 241, 353, 556, 783, 1506
AflIII	ACRYGT	3 cut(s)	888, 1228, 1776
AhlI	ACTAGT	2 cut(s)	803, 1990
AjnI	CCWGG	4 cut(s)	634, 967, 1555, 1726
AjuI	GAANNNNNNNTTGG	2 cut(s)	1189, 1221
AluBI	AGCT	7 cut(s)	433, 487, 919, 1304, 1797, 2025, 2041
AluI	AGCT	7 cut(s)	433, 487, 919, 1304, 1797, 2025, 2041
Alw21I	GWGCWC	2 cut(s)	1306, 1550
Alw26I	GTCTC	3 cut(s)	33, 940, 1114
AlwI	GGATC	4 cut(s)	289, 716, 1547, 1993
Ama87I	CYCGRG	1 cut(s)	1044
Aor51HI	AGCGCT	1 cut(s)	83
AoxI	GGCC	6 cut(s)	324, 473, 547, 562, 1087, 1848
ApeKI	GCWGC	6 cut(s)	12, 455, 499, 1319, 1797, 2022
ApoI	RAATTY	3 cut(s)	209, 908, 2010
Asp700I	GAANNNNTTC	2 cut(s)	1454, 1625
Asp718I	GGTACC	1 cut(s)	1036
AspLEI	GCGC	5 cut(s)	84, 247, 272, 1463, 1952
AspS9I	GGNCC	5 cut(s)	231, 325, 547, 563, 1494
AsuC2I	CCSGG	2 cut(s)	149, 591
AsuHPI	GGTGA	7 cut(s)	95, 137, 957, 1459, 1883, 1903, 2029
AsuII	TTCGAA	1 cut(s)	812
AvaI	CYCGRG	1 cut(s)	1044
AvaII	GGWCC	2 cut(s)	231, 1494
BaeGI	GKGCMC	1 cut(s)	143
BanI	GGYRCC	2 cut(s)	1036, 1949
BanII	GRGCYC	1 cut(s)	1306
BarI	GAAGNNNNNNTAC	2 cut(s)	68, 100
BauI	CACGAG	1 cut(s)	843
BbsI	GAAGAC	3 cut(s)	732, 1248, 1618
Bbv12I	GWGCWC	2 cut(s)	1306, 1550
BbvI	GCAGC	6 cut(s)	24, 442, 511, 1306, 1784, 2034
BceAI	ACGGC	1 cut(s)	25
BcgI	CGANNNNNNTGC	2 cut(s)	293, 327
BciT130I	CCWGG	4 cut(s)	636, 969, 1557, 1728
BcnI	CCSGG	2 cut(s)	149, 591
BcoDI	GTCTC	3 cut(s)	33, 940, 1114
BcuI	ACTAGT	2 cut(s)	803, 1990
BfaI	CTAG	6 cut(s)	30, 434, 447, 804, 1377, 1991
BfmI	CTRYAG	2 cut(s)	710, 1325
BfoI	RGCGCY	2 cut(s)	85, 1953
BfuAI	ACCTGC	1 cut(s)	1577
BglI	GCCNNNNNGGC	1 cut(s)	1927
BglII	AGATCT	2 cut(s)	1273, 1381
BisI	GCNGC	7 cut(s)	13, 456, 500, 678, 1320, 1798, 2023
BlpI	GCTNAGC	1 cut(s)	2037
BlsI	GCNGC	7 cut(s)	14, 457, 501, 679, 1321, 1799, 2024
Bme1390I	CCNGG	6 cut(s)	149, 591, 636, 969, 1557, 1728
Bme18I	GGWCC	2 cut(s)	231, 1494
BmeT110I	CYCGRG	1 cut(s)	1044
BmgT120I	GGNCC	5 cut(s)	231, 325, 547, 563, 1494
BmiI	GGNNCC	6 cut(s)	195, 233, 548, 1038, 1604, 1951
BmrFI	CCNGG	6 cut(s)	149, 591, 636, 969, 1557, 1728
BmsI	GCATC	4 cut(s)	156, 290, 848, 1484
BpiI	GAAGAC	3 cut(s)	732, 1248, 1618
BplI	GAGNNNNNCTC	2 cut(s)	312, 344
Bpu10I	CCTNAGC	1 cut(s)	701
Bpu1102I	GCTNAGC	1 cut(s)	2037
Bpu14I	TTCGAA	1 cut(s)	812
BpuEI	CTTGAG	1 cut(s)	314
BpuMI	CCSGG	2 cut(s)	149, 591
BsaBI	GATNNNNATC	1 cut(s)	579
BsaHI	GRCGYC	1 cut(s)	1950
BsaI	GGTCTC	1 cut(s)	33
BsaJI	CCNNGG	8 cut(s)	550, 590, 635, 687, 794, 1209, 1408, 1727
BsaXI	ACNNNNNCTCC	6 cut(s)	38, 41, 68, 71, 1515, 1545
Bsc4I	CCNNNNNNNGG	6 cut(s)	148, 241, 353, 556, 783, 1506
Bse118I	RCCGGY	1 cut(s)	1846
Bse1I	ACTGG	1 cut(s)	494
Bse3DI	GCAATG	6 cut(s)	309, 672, 1690, 1857, 1869, 1975
Bse8I	GATNNNNATC	1 cut(s)	579
BseBI	CCWGG	4 cut(s)	636, 969, 1557, 1728
BseDI	CCNNGG	8 cut(s)	550, 590, 635, 687, 794, 1209, 1408, 1727
BseJI	GATNNNNATC	1 cut(s)	579
BseLI	CCNNNNNNNGG	6 cut(s)	148, 241, 353, 556, 783, 1506
BseMI	GCAATG	6 cut(s)	309, 672, 1690, 1857, 1869, 1975
BseMII	CTCAG	1 cut(s)	1673
BseNI	ACTGG	1 cut(s)	494
BseRI	GAGGAG	3 cut(s)	46, 186, 1432
BseSI	GKGCMC	1 cut(s)	143
BseXI	GCAGC	6 cut(s)	24, 442, 511, 1306, 1784, 2034
BseYI	CCCAGC	1 cut(s)	483
BsgI	GTGCAG	2 cut(s)	518, 1605
Bsh1236I	CGCG	1 cut(s)	21
BshFI	GGCC	6 cut(s)	326, 475, 549, 564, 1089, 1850
BshNI	GGYRCC	2 cut(s)	1036, 1949
BsiHKAI	GWGCWC	2 cut(s)	1306, 1550
BsiHKCI	CYCGRG	1 cut(s)	1044
BsiSI	CCGG	4 cut(s)	60, 149, 590, 1847
BslFI	GGGAC	1 cut(s)	643
BslI	CCNNNNNNNGG	6 cut(s)	148, 241, 353, 556, 783, 1506
BsmAI	GTCTC	3 cut(s)	33, 940, 1114
BsmFI	GGGAC	1 cut(s)	643
BsmI	GAATGC	1 cut(s)	418
BsnI	GGCC	6 cut(s)	326, 475, 549, 564, 1089, 1850
Bso31I	GGTCTC	1 cut(s)	33
BsoBI	CYCGRG	1 cut(s)	1044
Bsp119I	TTCGAA	1 cut(s)	812
Bsp1286I	GDGCHC	3 cut(s)	143, 1306, 1550
Bsp1407I	TGTACA	1 cut(s)	1005
Bsp1720I	GCTNAGC	1 cut(s)	2037
Bsp19I	CCATGG	2 cut(s)	550, 687
BspANI	GGCC	6 cut(s)	326, 475, 549, 564, 1089, 1850
BspCNI	CTCAG	1 cut(s)	1672
BspFNI	CGCG	1 cut(s)	21
BspHI	TCATGA	2 cut(s)	663, 864
BspLI	GGNNCC	6 cut(s)	195, 233, 548, 1038, 1604, 1951
BspMAI	CTGCAG	2 cut(s)	714, 1329
BspMI	ACCTGC	1 cut(s)	1577
BspPI	GGATC	4 cut(s)	289, 716, 1547, 1993
BspT104I	TTCGAA	1 cut(s)	812
BspT107I	GGYRCC	2 cut(s)	1036, 1949
BspTNI	GGTCTC	1 cut(s)	33
BsrBI	CCGCTC	1 cut(s)	1869
BsrDI	GCAATG	6 cut(s)	309, 672, 1690, 1857, 1869, 1975
BsrFI	RCCGGY	1 cut(s)	1846
BsrGI	TGTACA	1 cut(s)	1005
BsrI	ACTGG	1 cut(s)	494
BssAI	RCCGGY	1 cut(s)	1846
BssECI	CCNNGG	8 cut(s)	550, 590, 635, 687, 794, 1209, 1408, 1727
BssNI	GRCGYC	1 cut(s)	1950
BssSI	CACGAG	1 cut(s)	843
BssT1I	CCWWGG	4 cut(s)	550, 687, 1209, 1408
Bst2BI	CACGAG	1 cut(s)	843
Bst2UI	CCWGG	4 cut(s)	636, 969, 1557, 1728
Bst4CI	ACNGT	6 cut(s)	92, 1571, 1736, 1999, 2065, 2089
BstACI	GRCGYC	1 cut(s)	1950
BstAPI	GCANNNNNTGC	1 cut(s)	166
BstAUI	TGTACA	1 cut(s)	1005
BstBI	TTCGAA	1 cut(s)	812
BstC8I	GCNNGC	4 cut(s)	562, 1317, 1932, 2027
BstDEI	CTNAG	4 cut(s)	701, 1580, 1659, 2037
BstDSI	CCRYGG	2 cut(s)	550, 687
BstENI	CCTNNNNNAGG	1 cut(s)	781
BstFNI	CGCG	1 cut(s)	21
BstH2I	RGCGCY	2 cut(s)	85, 1953
BstHHI	GCGC	5 cut(s)	84, 247, 272, 1463, 1952
BstMAI	GTCTC	3 cut(s)	33, 940, 1114
BstNI	CCWGG	4 cut(s)	636, 969, 1557, 1728
BstNSI	RCATGY	4 cut(s)	892, 1195, 1232, 1780
BstSCI	CCNGG	6 cut(s)	147, 589, 634, 967, 1555, 1726
BstSFI	CTRYAG	2 cut(s)	710, 1325
BstSLI	GKGCMC	1 cut(s)	143
BstUI	CGCG	1 cut(s)	21
BstV1I	GCAGC	6 cut(s)	24, 442, 511, 1306, 1784, 2034
BstV2I	GAAGAC	3 cut(s)	732, 1248, 1618
BstX2I	RGATCY	3 cut(s)	294, 1273, 1381
BstXI	CCANNNNNNTGG	1 cut(s)	635
BstYI	RGATCY	3 cut(s)	294, 1273, 1381
BsuRI	GGCC	6 cut(s)	326, 475, 549, 564, 1089, 1850
BtgI	CCRYGG	2 cut(s)	550, 687
BtgZI	GCGATG	1 cut(s)	1386
BtsI	GCAGTG	2 cut(s)	96, 1695
BtsIMutI	CAGTG	5 cut(s)	96, 501, 1667, 1695, 2004
BveI	ACCTGC	1 cut(s)	1577
Cac8I	GCNNGC	4 cut(s)	562, 1317, 1932, 2027
CciI	TCATGA	2 cut(s)	663, 864
CfoI	GCGC	5 cut(s)	84, 247, 272, 1463, 1952
Cfr10I	RCCGGY	1 cut(s)	1846
Cfr13I	GGNCC	5 cut(s)	231, 325, 547, 563, 1494
CseI	GACGC	1 cut(s)	27
Csp6I	GTAC	6 cut(s)	7, 359, 1006, 1037, 1590, 1828
CspCI	CAANNNNNGTGG	4 cut(s)	1073, 1108, 1554, 1589
CviQI	GTAC	6 cut(s)	7, 359, 1006, 1037, 1590, 1828
DdeI	CTNAG	4 cut(s)	701, 1580, 1659, 2037
DinI	GGCGCC	1 cut(s)	1951
EaeI	YGGCCR	1 cut(s)	1848
EciI	GGCGGA	1 cut(s)	51
Ecl136II	GAGCTC	1 cut(s)	1304
Eco130I	CCWWGG	4 cut(s)	550, 687, 1209, 1408
Eco147I	AGGCCT	1 cut(s)	1089
Eco24I	GRGCYC	1 cut(s)	1306
Eco31I	GGTCTC	1 cut(s)	33
Eco47I	GGWCC	2 cut(s)	231, 1494
Eco47III	AGCGCT	1 cut(s)	83
Eco53kI	GAGCTC	1 cut(s)	1304
Eco88I	CYCGRG	1 cut(s)	1044
EcoICRI	GAGCTC	1 cut(s)	1304
EcoNI	CCTNNNNNAGG	1 cut(s)	781
EcoO109I	RGGNCCY	2 cut(s)	231, 325
EcoRII	CCWGG	4 cut(s)	634, 967, 1555, 1726
EcoT14I	CCWWGG	4 cut(s)	550, 687, 1209, 1408
EcoT38I	GRGCYC	1 cut(s)	1306
EgeI	GGCGCC	1 cut(s)	1951
EheI	GGCGCC	1 cut(s)	1951
ErhI	CCWWGG	4 cut(s)	550, 687, 1209, 1408
FalI	AAGNNNNNCTT	4 cut(s)	2030, 2062, 2093, 2125
FaqI	GGGAC	1 cut(s)	643
Fnu4HI	GCNGC	7 cut(s)	13, 456, 500, 678, 1320, 1798, 2023
FriOI	GRGCYC	1 cut(s)	1306
Fsp4HI	GCNGC	7 cut(s)	13, 456, 500, 678, 1320, 1798, 2023
FspBI	CTAG	6 cut(s)	30, 434, 447, 804, 1377, 1991
FspI	TGCGCA	2 cut(s)	271, 1462
GlaI	GCGC	5 cut(s)	83, 246, 271, 1462, 1951
GluI	GCNGC	7 cut(s)	13, 456, 500, 678, 1320, 1798, 2023
GsaI	CCCAGC	1 cut(s)	487
HaeII	RGCGCY	2 cut(s)	85, 1953
HaeIII	GGCC	6 cut(s)	326, 475, 549, 564, 1089, 1850
HapII	CCGG	4 cut(s)	60, 149, 590, 1847
HgaI	GACGC	1 cut(s)	27
HhaI	GCGC	5 cut(s)	84, 247, 272, 1463, 1952
Hin1I	GRCGYC	1 cut(s)	1950
Hin6I	GCGC	5 cut(s)	82, 245, 270, 1461, 1950
HinP1I	GCGC	5 cut(s)	82, 245, 270, 1461, 1950
HincII	GTYRAC	2 cut(s)	886, 1562
HindII	GTYRAC	2 cut(s)	886, 1562
HpaII	CCGG	4 cut(s)	60, 149, 590, 1847
HphI	GGTGA	7 cut(s)	95, 137, 957, 1459, 1883, 1903, 2029
Hpy166II	GTNNAC	6 cut(s)	359, 886, 1450, 1562, 1721, 1828
Hpy8I	GTNNAC	6 cut(s)	359, 886, 1450, 1562, 1721, 1828
Hpy99I	CGWCG	1 cut(s)	53
HpyAV	CCTTC	7 cut(s)	66, 116, 235, 576, 1070, 1179, 1382
HpyCH4III	ACNGT	6 cut(s)	92, 1571, 1736, 1999, 2065, 2089
HpyF3I	CTNAG	4 cut(s)	701, 1580, 1659, 2037
Hsp92I	GRCGYC	1 cut(s)	1950
HspAI	GCGC	5 cut(s)	82, 245, 270, 1461, 1950
KasI	GGCGCC	1 cut(s)	1949
KpnI	GGTACC	1 cut(s)	1040
LmnI	GCTCC	6 cut(s)	199, 492, 916, 1301, 1419, 1608
Lsp1109I	GCAGC	6 cut(s)	24, 442, 511, 1306, 1784, 2034
LweI	GCATC	4 cut(s)	156, 290, 848, 1484
MaeI	CTAG	6 cut(s)	30, 434, 447, 804, 1377, 1991
MaeIII	GTNAC	3 cut(s)	92, 1213, 1993
MbiI	CCGCTC	1 cut(s)	1869
MboII	GAAGA	7 cut(s)	88, 386, 732, 1253, 1618, 1739, 1872
MfeI	CAATTG	3 cut(s)	419, 930, 1098
MflI	RGATCY	3 cut(s)	294, 1273, 1381
MhlI	GDGCHC	3 cut(s)	143, 1306, 1550
Mly113I	GGCGCC	1 cut(s)	1950
MlyI	GAGTC	5 cut(s)	47, 1533, 1539, 1799, 2060
MmeI	TCCRAC	3 cut(s)	950, 1277, 1503
MroXI	GAANNNNTTC	2 cut(s)	1454, 1625
MseI	TTAA	3 cut(s)	765, 2067, 2100
MslI	CAYNNNNRTG	2 cut(s)	150, 1862
MspA1I	CMGCKG	2 cut(s)	15, 1287
MspI	CCGG	4 cut(s)	60, 149, 590, 1847
MspR9I	CCNGG	6 cut(s)	149, 591, 636, 969, 1557, 1728
MunI	CAATTG	3 cut(s)	419, 930, 1098
Mva1269I	GAATGC	1 cut(s)	418
MvaI	CCWGG	4 cut(s)	636, 969, 1557, 1728
MvnI	CGCG	1 cut(s)	21
NarI	GGCGCC	1 cut(s)	1950
NciI	CCSGG	2 cut(s)	149, 591
NcoI	CCATGG	2 cut(s)	550, 687
NlaIV	GGNNCC	6 cut(s)	195, 233, 548, 1038, 1604, 1951
NmuCI	GTSAC	2 cut(s)	92, 1993
NsbI	TGCGCA	2 cut(s)	271, 1462
NspI	RCATGY	4 cut(s)	892, 1195, 1232, 1780
NspV	TTCGAA	1 cut(s)	812
PagI	TCATGA	2 cut(s)	663, 864
PceI	AGGCCT	1 cut(s)	1089
PciI	ACATGT	3 cut(s)	888, 1228, 1776
PctI	GAATGC	1 cut(s)	418
PdmI	GAANNNNTTC	2 cut(s)	1454, 1625
PfeI	GAWTC	8 cut(s)	109, 377, 773, 848, 1183, 1396, 1877, 1908
PflMI	CCANNNNNTGG	1 cut(s)	556
PkrI	GCNGC	7 cut(s)	14, 457, 501, 679, 1321, 1799, 2024
PleI	GAGTC	5 cut(s)	47, 1532, 1538, 1799, 2059
PluTI	GGCGCC	1 cut(s)	1953
PpsI	GAGTC	5 cut(s)	47, 1532, 1538, 1799, 2059
PpuMI	RGGWCCY	1 cut(s)	231
PscI	ACATGT	3 cut(s)	888, 1228, 1776
Psp124BI	GAGCTC	1 cut(s)	1306
Psp5II	RGGWCCY	1 cut(s)	231
Psp6I	CCWGG	4 cut(s)	634, 967, 1555, 1726
PspFI	CCCAGC	1 cut(s)	483
PspGI	CCWGG	4 cut(s)	634, 967, 1555, 1726
PspN4I	GGNNCC	6 cut(s)	195, 233, 548, 1038, 1604, 1951
PspPI	GGNCC	5 cut(s)	231, 325, 547, 563, 1494
PspPPI	RGGWCCY	1 cut(s)	231
PstI	CTGCAG	2 cut(s)	714, 1329
PsuI	RGATCY	3 cut(s)	294, 1273, 1381
RsaI	GTAC	6 cut(s)	8, 360, 1007, 1038, 1591, 1829
RsaNI	GTAC	6 cut(s)	7, 359, 1006, 1037, 1590, 1828
RseI	CAYNNNNRTG	2 cut(s)	150, 1862
SacI	GAGCTC	1 cut(s)	1306
SaqAI	TTAA	3 cut(s)	765, 2067, 2100
SatI	GCNGC	7 cut(s)	13, 456, 500, 678, 1320, 1798, 2023
Sau96I	GGNCC	5 cut(s)	231, 325, 547, 563, 1494
SchI	GAGTC	5 cut(s)	47, 1533, 1539, 1799, 2060
ScrFI	CCNGG	6 cut(s)	149, 591, 636, 969, 1557, 1728
SduI	GDGCHC	3 cut(s)	143, 1306, 1550
SfaNI	GCATC	4 cut(s)	156, 290, 848, 1484
SfcI	CTRYAG	2 cut(s)	710, 1325
SfoI	GGCGCC	1 cut(s)	1951
SfuI	TTCGAA	1 cut(s)	812
SinI	GGWCC	2 cut(s)	231, 1494
SmiMI	CAYNNNNRTG	2 cut(s)	150, 1862
SmlI	CTYRAG	1 cut(s)	329
SmoI	CTYRAG	1 cut(s)	329
SpeI	ACTAGT	2 cut(s)	803, 1990
SseBI	AGGCCT	1 cut(s)	1089
SspDI	GGCGCC	1 cut(s)	1949
SspMI	CTAG	6 cut(s)	30, 434, 447, 804, 1377, 1991
SstI	GAGCTC	1 cut(s)	1306
StuI	AGGCCT	1 cut(s)	1089
StyD4I	CCNGG	6 cut(s)	147, 589, 634, 967, 1555, 1726
StyI	CCWWGG	4 cut(s)	550, 687, 1209, 1408
TaaI	ACNGT	6 cut(s)	92, 1571, 1736, 1999, 2065, 2089
TaqI	TCGA	8 cut(s)	277, 812, 954, 1080, 1104, 1153, 1654, 1750
TatI	WGTACW	2 cut(s)	1005, 1827
TauI	GCSGC	1 cut(s)	680
TfiI	GAWTC	8 cut(s)	109, 377, 773, 848, 1183, 1396, 1877, 1908
Tru1I	TTAA	3 cut(s)	765, 2067, 2100
Tru9I	TTAA	3 cut(s)	765, 2067, 2100
TscAI	CASTG	5 cut(s)	103, 501, 1667, 1695, 2004
TseFI	GTSAC	2 cut(s)	92, 1993
TseI	GCWGC	6 cut(s)	12, 455, 499, 1319, 1797, 2022
Tsp45I	GTSAC	2 cut(s)	92, 1993
TspDTI	ATGAA	7 cut(s)	168, 254, 405, 497, 749, 1442, 1659
TspGWI	ACGGA	1 cut(s)	1497
TspRI	CASTG	5 cut(s)	103, 501, 1667, 1695, 2004
Van91I	CCANNNNNTGG	1 cut(s)	556
VpaK11BI	GGWCC	2 cut(s)	231, 1494
XagI	CCTNNNNNAGG	1 cut(s)	781
XapI	RAATTY	3 cut(s)	209, 908, 2010
XceI	RCATGY	4 cut(s)	892, 1195, 1232, 1780
XcmI	CCANNNNNNNNNTGG	2 cut(s)	557, 1712
XmnI	GAANNNNTTC	2 cut(s)	1454, 1625
XspI	CTAG	6 cut(s)	30, 434, 447, 804, 1377, 1991

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.