Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7C

Orthogroup ID

OG0009078

Physical Location & Seq

Genomic Coordinates Reverse (-)

494820 .. 499364

Gene Structure 4545 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7CG006700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1770 bp

ATGGAGTTTGGCAGCGGAGCAGGCGGTGGCTCCGGTGGAGACCACGATGGCTCAGACTCTCAAAGAAGGAAGAAGCGCTACCATCGTCACACTGCTAACCAGATTCAGAGGCTTGAAGGGATGTTCAAGGACTGCCCTCACCCGGATGAAAAGCAAAGGTTGCAGTTGAGCAGAGAACTGGGCTTGGCTCCTCGCCAGATCAAGTTTTGGTTTCAAAACCGGAGAACCCAGATGAAGGCCCAGCATGAAAGAGCTGATAACTCTGCGCTTCGATCAGAGAATGACAAGATCCGATGTGAGAACATTGCCATCCGAGAGGCACTTAAAAATGTGATTTGCCCATCTTGCGGTGTCCCCCCCATTAATGAAGATAACTATTTCGATGAACACAAATTGCGAATGGAGAACGCCCAACTGAAAGAAGAGCTAGATAGAGTCTCTAGTATTGCTGCCAAGTACATTGGGAGGCCCATTTCTCAGCTCCCACCAGTTCAGCCTATTCATATATCTCCTTTGGATTTATCAATGGCGAGTTTTGGGGGGCATGGAATGGGCGGTCCTTCTCTTGATCTTGATCTTCTTACAGGGAGTACTTCATCTACCATACCCAGTTTGCCGTACCAGCCTATGGGCATTTCAGACATGGACAAGTCCCTCATGACAGATATCGCTGCAAATGCAATGGAAGAGTTGCTTAGGCTTTTGCAGACCAATGATCCTCTGTGGATGAAGTCATCCACTGATGGCAGGGATGTTCTTAATCTTGAAAGCTATGAGAGGATTTTCCCCAGGGCTACTACTCATTTGAAAAATCCCAATCTTAGAATTGAAGCATCTAGAGCTTCTGGTGTGGTAATCATGAATGGCTTAGCATTAGTCGACATGATTATGGACTCGAACAAATTTGGGGAGCTATTTCCGACAATTGTCTCAATGGCTAGAACAATTGAAGTGATATCGTCTGGAATGTTAGGTAGTCACAGCGGCTCTCTGCAGCTGATGTACAAAGAGTTGCAGGTGCTTTCACCATTAGTACCAACTCGAGAGTTCTACTTCCTTCGTTATTGTCACCAAATTGAGCAAGGCCATTGGGCCATTGTTGATGTGTCTTATGATTTTCCACGAGATAATCAATTTACAAATCAATGTCGATCTCATAGGCTTCCTTCTGGATGCTTGATTCAAGACATGCCTAATGGATATTCCAAGGTTACTTGGGTGGAACACGTTGAAATAGAAGAGAAAGCCCCAATTCATCGACTTTATAGAGATCTTATTCACAGTGGACAAGCATTTGGAGCTGAAAGATGGCTTGTTGTTCTTCAGAGAATGTGTGAAAGATTTGCATGCCTAATGGTGTCAGGCACTTCTACTAGAGATCTTGAAGGAGTGATCCCATCACCTGAAGGCAAGAGAAGCATGATGAAACTTGCCCAAAGGATGGTCAACAACTTCTGTGCAAGCATTAGCACATCTAATGGCCATCGGTGGACCACAATTTCTGGTATGAACGAAGTTGGAGTGCGAGTGACCATCCATAAGAGCACGGATCCTGGTAAGCCCAATGGTGTGGTTCTTAGTGCAGCTACTACCATTTGGCTCCCACTATCTCCACAAACTGTCTTCAATTTCTTCAAGGATGAAAGAACTCGACCTCAGTGGGATGTCCTTTCCAATGGCAATGCAGTGCAAGAGGTCGCCCATATAGCAAATGGTTCACATCCAGGGAACTGCATATCTGTTCTTCGAGTAAGATCATATATGAACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000902 GO:0000904 GO:0000976 GO:0001067 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007275 GO:0008150 GO:0009653 GO:0009664 GO:0009791 GO:0009827 GO:0009828 GO:0009888 GO:0009889 GO:0009908 GO:0009987 GO:0010026 GO:0010090 GO:0010091 GO:0010468 GO:0010556 GO:0016043 GO:0019219 GO:0019222 GO:0022414 GO:0030154 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0032989 GO:0042545 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044212 GO:0044424 GO:0044464 GO:0045229 GO:0045595 GO:0045596 GO:0048367 GO:0048437 GO:0048468 GO:0048497 GO:0048519 GO:0048523 GO:0048608 GO:0048731 GO:0048856 GO:0048869 GO:0050789 GO:0050793 GO:0050794 GO:0051093 GO:0051171 GO:0051252 GO:0060255 GO:0061458 GO:0065007 GO:0071554 GO:0071555 GO:0071669 GO:0071840 GO:0080090 GO:0090558 GO:0090567 GO:0090626 GO:0090700 GO:0097159 GO:0099402 GO:0140110 GO:1901363 GO:1903506 GO:1990837 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Homeobox START

Protein Analysis

589

Amino Acids

66.13

Weight (kDa)

7.98

Isoelectric Point (pI)

46.71

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Homeodomain	PF00046	24 - 79	1.3e-18	Homeodomain
START	PF01852	223 - 447	2.5e-45	START domain
PDF2_C	PF25797	467 - 584	1.2e-51	PDF2-like, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009078)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G17920 AT1G17920 AT1G73360
fragaria_vesca	FvH4_5g18090 FvH4_5g18090
malus_domestica	MD06G1236400.v1.1 MD14G1243300.v1.1
prunus_persica	Prupe.5G240900_v2.0.a1
pyrus_communis	pycom06g21200 pycom06g21210 pycom14g20460 pycom15g33770
rosa_chinensis	RchiOBHm_Chr7g0177521
rosa_laevigata	RLG00000005530
rosa_multiflora	Rmu_ssc0000330.1_g000002
rosa_roxburghii	Rroxscaffold_3G00275800
rosa_rugosa	Rorug06G0407000
rosa_samantha	Rh7AG006300 Rh7BG006200 Rh7CG006700 Rh7DG006300
rosa_wichuraiana	Rw7G000520

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1006
Acc36I	ACCTGC	1 cut(s)	1006
AccB7I	CCANNNNNTGG	2 cut(s)	628, 1441
AccI	GTMKAC	1 cut(s)	879
AciI	CCGC	5 cut(s)	15, 24, 348, 555, 984
AclWI	GGATC	5 cut(s)	283, 710, 1387, 1544, 1557
AcoI	YGGCCR	1 cut(s)	1480
AcsI	RAATTY	1 cut(s)	902
AcuI	CTGAAG	2 cut(s)	1307, 1425
AfaI	GTAC	5 cut(s)	458, 592, 620, 1004, 1035
AfeI	AGCGCT	1 cut(s)	77
AfiI	CCNNNNNNNGG	5 cut(s)	142, 235, 347, 628, 1441
AflIII	ACRYGT	1 cut(s)	1225
AjnI	CCWGG	3 cut(s)	788, 1552, 1723
AluBI	AGCT	9 cut(s)	254, 427, 481, 771, 842, 913, 997, 1301, 1586
AluI	AGCT	9 cut(s)	254, 427, 481, 771, 842, 913, 997, 1301, 1586
Alw21I	GWGCWC	1 cut(s)	1547
Alw26I	GTCTC	3 cut(s)	33, 442, 934
AlwI	GGATC	5 cut(s)	283, 710, 1387, 1544, 1557
Ama87I	CYCGRG	1 cut(s)	1041
Aor51HI	AGCGCT	1 cut(s)	77
AoxI	GGCC	5 cut(s)	237, 467, 1084, 1092, 1480
ApeKI	GCWGC	5 cut(s)	12, 449, 671, 994, 1583
ApoI	RAATTY	1 cut(s)	902
AseI	ATTAAT	1 cut(s)	363
AspLEI	GCGC	2 cut(s)	78, 268
AspS9I	GGNCC	5 cut(s)	238, 468, 557, 1092, 1491
AsuC2I	CCSGG	1 cut(s)	143
AsuHPI	GGTGA	4 cut(s)	131, 1017, 1061, 1392
AvaI	CYCGRG	1 cut(s)	1041
AvaII	GGWCC	2 cut(s)	557, 1491
BalI	TGGCCA	1 cut(s)	1482
BamHI	GGATCC	1 cut(s)	1549
BarI	GAAGNNNNNNTAC	2 cut(s)	62, 94
BauI	CACGAG	1 cut(s)	1122
BbsI	GAAGAC	1 cut(s)	1615
Bbv12I	GWGCWC	1 cut(s)	1547
BbvI	GCAGC	5 cut(s)	24, 436, 658, 1006, 1595
BceAI	ACGGC	1 cut(s)	601
BciT130I	CCWGG	3 cut(s)	790, 1554, 1725
BcnI	CCSGG	1 cut(s)	143
BcoDI	GTCTC	3 cut(s)	33, 442, 934
BfaI	CTAG	5 cut(s)	428, 441, 837, 939, 1374
BfmI	CTRYAG	1 cut(s)	992
BfoI	RGCGCY	1 cut(s)	79
BfuAI	ACCTGC	1 cut(s)	1006
BglII	AGATCT	2 cut(s)	1270, 1378
BisI	GCNGC	6 cut(s)	13, 450, 672, 985, 995, 1584
BlpI	GCTNAGC	1 cut(s)	868
BlsI	GCNGC	6 cut(s)	14, 451, 673, 986, 996, 1585
BmcAI	AGTACT	1 cut(s)	592
Bme1390I	CCNGG	4 cut(s)	143, 790, 1554, 1725
Bme18I	GGWCC	2 cut(s)	557, 1491
BmeT110I	CYCGRG	1 cut(s)	1041
BmgT120I	GGNCC	5 cut(s)	238, 468, 557, 1092, 1491
BmiI	GGNNCC	4 cut(s)	31, 189, 1551, 1601
BmrFI	CCNGG	4 cut(s)	143, 790, 1554, 1725
BmrI	ACTGGG	2 cut(s)	188, 603
BmsI	GCATC	2 cut(s)	842, 1163
BmuI	ACTGGG	2 cut(s)	188, 603
BoxI	GACNNNNGTC	1 cut(s)	926
BpiI	GAAGAC	1 cut(s)	1615
Bpu10I	CCTNAGC	1 cut(s)	695
Bpu1102I	GCTNAGC	1 cut(s)	868
BpuMI	CCSGG	1 cut(s)	143
BsaBI	GATNNNNATC	1 cut(s)	573
BsaI	GGTCTC	1 cut(s)	33
BsaJI	CCNNGG	4 cut(s)	788, 789, 1206, 1724
BsaWI	WCCGGW	2 cut(s)	32, 219
BsaXI	ACNNNNNCTCC	2 cut(s)	1512, 1542
Bsc4I	CCNNNNNNNGG	5 cut(s)	142, 235, 347, 628, 1441
Bse1I	ACTGG	3 cut(s)	183, 488, 609
Bse3DI	GCAATG	3 cut(s)	303, 687, 1687
Bse8I	GATNNNNATC	1 cut(s)	573
BseBI	CCWGG	3 cut(s)	790, 1554, 1725
BseDI	CCNNGG	4 cut(s)	788, 789, 1206, 1724
BseJI	GATNNNNATC	1 cut(s)	573
BseLI	CCNNNNNNNGG	5 cut(s)	142, 235, 347, 628, 1441
BseMI	GCAATG	3 cut(s)	303, 687, 1687
BseMII	CTCAG	3 cut(s)	66, 491, 1670
BseNI	ACTGG	3 cut(s)	183, 488, 609
BseRI	GAGGAG	1 cut(s)	180
BseXI	GCAGC	5 cut(s)	24, 436, 658, 1006, 1595
BseYI	CCCAGC	1 cut(s)	240
BsgI	GTGCAG	1 cut(s)	1602
BshFI	GGCC	5 cut(s)	239, 469, 1086, 1094, 1482
BsiHKAI	GWGCWC	1 cut(s)	1547
BsiHKCI	CYCGRG	1 cut(s)	1041
BsiSI	CCGG	3 cut(s)	33, 143, 220
BslFI	GGGAC	2 cut(s)	338, 637
BslI	CCNNNNNNNGG	5 cut(s)	142, 235, 347, 628, 1441
BsmAI	GTCTC	3 cut(s)	33, 442, 934
BsmFI	GGGAC	2 cut(s)	338, 637
BsnI	GGCC	5 cut(s)	239, 469, 1086, 1094, 1482
Bso31I	GGTCTC	1 cut(s)	33
BsoBI	CYCGRG	1 cut(s)	1041
Bsp1286I	GDGCHC	1 cut(s)	1547
Bsp1407I	TGTACA	1 cut(s)	1002
Bsp1720I	GCTNAGC	1 cut(s)	868
BspACI	CCGC	5 cut(s)	15, 24, 348, 555, 984
BspANI	GGCC	5 cut(s)	239, 469, 1086, 1094, 1482
BspCNI	CTCAG	3 cut(s)	65, 490, 1669
BspHI	TCATGA	2 cut(s)	657, 858
BspLI	GGNNCC	4 cut(s)	31, 189, 1551, 1601
BspMAI	CTGCAG	1 cut(s)	996
BspMI	ACCTGC	1 cut(s)	1006
BspPI	GGATC	5 cut(s)	283, 710, 1387, 1544, 1557
BspQI	GCTCTTC	1 cut(s)	417
BspTNI	GGTCTC	1 cut(s)	33
BsrDI	GCAATG	3 cut(s)	303, 687, 1687
BsrGI	TGTACA	1 cut(s)	1002
BsrI	ACTGG	3 cut(s)	183, 488, 609
BssECI	CCNNGG	4 cut(s)	788, 789, 1206, 1724
BssSI	CACGAG	1 cut(s)	1122
BssT1I	CCWWGG	1 cut(s)	1206
Bst2BI	CACGAG	1 cut(s)	1122
Bst2UI	CCWGG	3 cut(s)	790, 1554, 1725
Bst4CI	ACNGT	2 cut(s)	1283, 1621
Bst6I	CTCTTC	3 cut(s)	417, 681, 1233
BstAPI	GCANNNNNTGC	1 cut(s)	160
BstAUI	TGTACA	1 cut(s)	1002
BstC8I	GCNNGC	3 cut(s)	22, 1348, 1462
BstDEI	CTNAG	7 cut(s)	52, 477, 695, 821, 868, 1577, 1656
BstH2I	RGCGCY	1 cut(s)	79
BstHHI	GCGC	2 cut(s)	78, 268
BstMAI	GTCTC	3 cut(s)	33, 442, 934
BstMWI	GCNNNNNNNGC	9 cut(s)	21, 160, 345, 622, 677, 839, 1298, 1416, 1706
BstNI	CCWGG	3 cut(s)	790, 1554, 1725
BstNSI	RCATGY	2 cut(s)	1192, 1350
BstPAI	GACNNNNGTC	1 cut(s)	926
BstSCI	CCNGG	4 cut(s)	141, 788, 1552, 1723
BstSFI	CTRYAG	1 cut(s)	992
BstV1I	GCAGC	5 cut(s)	24, 436, 658, 1006, 1595
BstV2I	GAAGAC	1 cut(s)	1615
BstX2I	RGATCY	4 cut(s)	288, 1270, 1378, 1549
BstXI	CCANNNNNNTGG	1 cut(s)	1570
BstYI	RGATCY	4 cut(s)	288, 1270, 1378, 1549
BsuRI	GGCC	5 cut(s)	239, 469, 1086, 1094, 1482
BtsI	GCAGTG	2 cut(s)	90, 1692
BtsIMutI	CAGTG	5 cut(s)	90, 738, 1288, 1664, 1692
BveI	ACCTGC	1 cut(s)	1006
Cac8I	GCNNGC	3 cut(s)	22, 1348, 1462
CciI	TCATGA	2 cut(s)	657, 858
CfoI	GCGC	2 cut(s)	78, 268
Cfr13I	GGNCC	5 cut(s)	238, 468, 557, 1092, 1491
Csp6I	GTAC	5 cut(s)	457, 591, 619, 1003, 1034
CviAII	CATG	9 cut(s)	245, 545, 643, 658, 859, 883, 1189, 1347, 1420
CviQI	GTAC	5 cut(s)	457, 591, 619, 1003, 1034
DdeI	CTNAG	7 cut(s)	52, 477, 695, 821, 868, 1577, 1656
EaeI	YGGCCR	1 cut(s)	1480
Eam1104I	CTCTTC	3 cut(s)	417, 681, 1233
EarI	CTCTTC	3 cut(s)	417, 681, 1233
Eco130I	CCWWGG	1 cut(s)	1206
Eco31I	GGTCTC	1 cut(s)	33
Eco32I	GATATC	2 cut(s)	667, 957
Eco47I	GGWCC	2 cut(s)	557, 1491
Eco47III	AGCGCT	1 cut(s)	77
Eco57I	CTGAAG	2 cut(s)	1307, 1425
Eco88I	CYCGRG	1 cut(s)	1041
EcoRII	CCWGG	3 cut(s)	788, 1552, 1723
EcoRV	GATATC	2 cut(s)	667, 957
EcoT14I	CCWWGG	1 cut(s)	1206
ErhI	CCWWGG	1 cut(s)	1206
FaeI	CATG	9 cut(s)	248, 548, 646, 661, 862, 886, 1192, 1350, 1423
FalI	AAGNNNNNCTT	2 cut(s)	678, 710
FaqI	GGGAC	2 cut(s)	338, 637
FatI	CATG	9 cut(s)	244, 544, 642, 657, 858, 882, 1188, 1346, 1419
FblI	GTMKAC	1 cut(s)	879
Fnu4HI	GCNGC	6 cut(s)	13, 450, 672, 985, 995, 1584
Fsp4HI	GCNGC	6 cut(s)	13, 450, 672, 985, 995, 1584
FspBI	CTAG	5 cut(s)	428, 441, 837, 939, 1374
GlaI	GCGC	2 cut(s)	77, 267
GluI	GCNGC	6 cut(s)	13, 450, 672, 985, 995, 1584
GsaI	CCCAGC	1 cut(s)	244
HaeII	RGCGCY	1 cut(s)	79
HaeIII	GGCC	5 cut(s)	239, 469, 1086, 1094, 1482
HapII	CCGG	3 cut(s)	33, 143, 220
HhaI	GCGC	2 cut(s)	78, 268
Hin1II	CATG	9 cut(s)	248, 548, 646, 661, 862, 886, 1192, 1350, 1423
Hin6I	GCGC	2 cut(s)	76, 266
HinP1I	GCGC	2 cut(s)	76, 266
HincII	GTYRAC	2 cut(s)	880, 1447
HindII	GTYRAC	2 cut(s)	880, 1447
HinfI	GANTC	5 cut(s)	56, 103, 435, 893, 1180
HpaII	CCGG	3 cut(s)	33, 143, 220
HphI	GGTGA	4 cut(s)	131, 1017, 1061, 1392
Hpy166II	GTNNAC	5 cut(s)	880, 1286, 1447, 1491, 1718
Hpy188I	TCNGA	8 cut(s)	55, 108, 277, 293, 314, 640, 921, 1326
Hpy8I	GTNNAC	5 cut(s)	880, 1286, 1447, 1491, 1718
HpyAV	CCTTC	8 cut(s)	60, 110, 229, 570, 1067, 1176, 1379, 1400
HpyCH4III	ACNGT	2 cut(s)	1283, 1621
HpyCH4IV	ACGT	1 cut(s)	1227
HpyF10VI	GCNNNNNNNGC	9 cut(s)	21, 160, 345, 622, 677, 839, 1298, 1416, 1706
HpyF3I	CTNAG	7 cut(s)	52, 477, 695, 821, 868, 1577, 1656
HpySE526I	ACGT	1 cut(s)	1227
Hsp92II	CATG	9 cut(s)	248, 548, 646, 661, 862, 886, 1192, 1350, 1423
HspAI	GCGC	2 cut(s)	76, 266
LguI	GCTCTTC	1 cut(s)	417
LmnI	GCTCC	7 cut(s)	17, 35, 193, 486, 910, 1298, 1605
Lsp1109I	GCAGC	5 cut(s)	24, 436, 658, 1006, 1595
LweI	GCATC	2 cut(s)	842, 1163
MaeI	CTAG	5 cut(s)	428, 441, 837, 939, 1374
MaeII	ACGT	1 cut(s)	1227
MaeIII	GTNAC	5 cut(s)	86, 977, 1067, 1210, 1528
MfeI	CAATTG	2 cut(s)	924, 945
MflI	RGATCY	4 cut(s)	288, 1270, 1378, 1549
MhlI	GDGCHC	1 cut(s)	1547
MlsI	TGGCCA	1 cut(s)	1482
MluNI	TGGCCA	1 cut(s)	1482
MlyI	GAGTC	3 cut(s)	50, 444, 887
MmeI	TCCRAC	2 cut(s)	944, 1498
Mox20I	TGGCCA	1 cut(s)	1482
MscI	TGGCCA	1 cut(s)	1482
MseI	TTAA	3 cut(s)	324, 363, 759
MslI	CAYNNNNRTG	2 cut(s)	144, 887
Msp20I	TGGCCA	1 cut(s)	1482
MspA1I	CMGCKG	3 cut(s)	15, 984, 997
MspI	CCGG	3 cut(s)	33, 143, 220
MspR9I	CCNGG	4 cut(s)	143, 790, 1554, 1725
MunI	CAATTG	2 cut(s)	924, 945
MvaI	CCWGG	3 cut(s)	790, 1554, 1725
MwoI	GCNNNNNNNGC	9 cut(s)	21, 160, 345, 622, 677, 839, 1298, 1416, 1706
NciI	CCSGG	1 cut(s)	143
NlaIII	CATG	9 cut(s)	248, 548, 646, 661, 862, 886, 1192, 1350, 1423
NlaIV	GGNNCC	4 cut(s)	31, 189, 1551, 1601
NmuCI	GTSAC	4 cut(s)	86, 977, 1067, 1528
NspI	RCATGY	2 cut(s)	1192, 1350
PaeI	GCATGC	1 cut(s)	1350
PaeR7I	CTCGAG	1 cut(s)	1041
PagI	TCATGA	2 cut(s)	657, 858
PaqCI	CACCTGC	1 cut(s)	1006
PasI	CCCWGGG	1 cut(s)	789
PciSI	GCTCTTC	1 cut(s)	417
PfeI	GAWTC	2 cut(s)	103, 1180
PflMI	CCANNNNNTGG	2 cut(s)	628, 1441
PkrI	GCNGC	6 cut(s)	14, 451, 673, 986, 996, 1585
PleI	GAGTC	3 cut(s)	50, 443, 887
PpsI	GAGTC	3 cut(s)	50, 443, 887
PshAI	GACNNNNGTC	1 cut(s)	926
PshBI	ATTAAT	1 cut(s)	363
Psp6I	CCWGG	3 cut(s)	788, 1552, 1723
PspFI	CCCAGC	1 cut(s)	240
PspGI	CCWGG	3 cut(s)	788, 1552, 1723
PspN4I	GGNNCC	4 cut(s)	31, 189, 1551, 1601
PspPI	GGNCC	5 cut(s)	238, 468, 557, 1092, 1491
PstI	CTGCAG	1 cut(s)	996
PsuI	RGATCY	4 cut(s)	288, 1270, 1378, 1549
PvuII	CAGCTG	1 cut(s)	997
RsaI	GTAC	5 cut(s)	458, 592, 620, 1004, 1035
RsaNI	GTAC	5 cut(s)	457, 591, 619, 1003, 1034
RseI	CAYNNNNRTG	2 cut(s)	144, 887
SalI	GTCGAC	1 cut(s)	878
SapI	GCTCTTC	1 cut(s)	417
SaqAI	TTAA	3 cut(s)	324, 363, 759
SatI	GCNGC	6 cut(s)	13, 450, 672, 985, 995, 1584
Sau96I	GGNCC	5 cut(s)	238, 468, 557, 1092, 1491
ScaI	AGTACT	1 cut(s)	592
SchI	GAGTC	3 cut(s)	50, 444, 887
ScrFI	CCNGG	4 cut(s)	143, 790, 1554, 1725
SduI	GDGCHC	1 cut(s)	1547
SfaNI	GCATC	2 cut(s)	842, 1163
SfcI	CTRYAG	1 cut(s)	992
Sfr274I	CTCGAG	1 cut(s)	1041
SinI	GGWCC	2 cut(s)	557, 1491
SlaI	CTCGAG	1 cut(s)	1041
SmiMI	CAYNNNNRTG	2 cut(s)	144, 887
SmlI	CTYRAG	1 cut(s)	1041
SmoI	CTYRAG	1 cut(s)	1041
SphI	GCATGC	1 cut(s)	1350
SsiI	CCGC	5 cut(s)	15, 24, 348, 555, 984
SspMI	CTAG	5 cut(s)	428, 441, 837, 939, 1374
StyD4I	CCNGG	4 cut(s)	141, 788, 1552, 1723
StyI	CCWWGG	1 cut(s)	1206
TaaI	ACNGT	2 cut(s)	1283, 1621
TaiI	ACGT	1 cut(s)	1230
TaqI	TCGA	9 cut(s)	271, 381, 879, 896, 1042, 1150, 1258, 1651, 1747
TatI	WGTACW	3 cut(s)	456, 590, 1002
TauI	GCSGC	1 cut(s)	987
TfiI	GAWTC	2 cut(s)	103, 1180
Tru1I	TTAA	3 cut(s)	324, 363, 759
Tru9I	TTAA	3 cut(s)	324, 363, 759
TscAI	CASTG	5 cut(s)	97, 745, 1288, 1664, 1692
TseFI	GTSAC	4 cut(s)	86, 977, 1067, 1528
TseI	GCWGC	5 cut(s)	12, 449, 671, 994, 1583
Tsp45I	GTSAC	4 cut(s)	86, 977, 1067, 1528
TspGWI	ACGGA	1 cut(s)	1562
TspRI	CASTG	5 cut(s)	97, 745, 1288, 1664, 1692
Van91I	CCANNNNNTGG	2 cut(s)	628, 1441
VpaK11BI	GGWCC	2 cut(s)	557, 1491
VspI	ATTAAT	1 cut(s)	363
XapI	RAATTY	1 cut(s)	902
XbaI	TCTAGA	1 cut(s)	836
XceI	RCATGY	2 cut(s)	1192, 1350
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1709
XhoI	CTCGAG	1 cut(s)	1041
XmiI	GTMKAC	1 cut(s)	879
XspI	CTAG	5 cut(s)	428, 441, 837, 939, 1374
ZrmI	AGTACT	1 cut(s)	592

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.