Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb5

Orthogroup ID

OG0009078

Physical Location & Seq

Genomic Coordinates Forward (+)

10399292 .. 10404224

Gene Structure 4933 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_5g18090.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2130 bp

ATGGAGTTTGGCGGTGGCTCCGGTGGAGACCACGATGGCTCAGACTCTCATAGAAGGAAGAAGCGCTACCATCGTCACACTTCTAACCAGATTCAGAGGCTTGAAGCGATGTTCAAAGACTGCCCTCACCCGGATGAAAAGCAAAGGTTGCAGTTGAGCAGAGAACTGGGCTTGGCTCCTCGCCAGATCAAATTTTGGTTCCAAAACCGGAGAACCCAGATGAAGGCCCAACATGAAAGAGCTGATAACTCTGTGCTTCGATCAGAGAACGACAAGATCCGATGTGAGAACATTGCCATCCGAGAGGCACTCAAAAATGTGATTTGCCCATCTTGTGGTGTCCCTCCCATTAATGAAGATAATTATTTTGATGAACACAAATTGAGAATGGAGAACGCTCAGTTGAAAGAAGAGCTAGATAGAGTATCTAGTATTGCTGCCAAGTACATAGGGAGGCCCATTTCTCAGCTCCCACCAGTTCAGCCTATTCATATATCTTCTCTGGATTTATCAATGGCAAGTTTTGGGGGGCATGGCATGGGTGGTCCTTCTCTTGATCTTGATCTTCTTCCGGGGAGTACTTCATCTACAATGCCTAGTTTGCCTTACCAGCCGATTGGCATTTCGGACATGGACAAGTCCCTCATGACAGATATTGCTGCAAATGCAATGGAAGAGTTGCTTAGGCTTTTGCAGACTAATGATCCACTATGGATGAAGTCATCCACCGATGGCAAGGATGTTCTTAATCTTGAAAGCTATGATAGGATTTTCCCCAGGGCTACTACTCATTTGAAAAATCCCAATCTTAGAATTGAAGCATCTAGAGCTTCTGGTGTGGTAATCATGAATGGCTTAGCATTAGTCGACATGATTATGGACCCGAACAAATTTGGGGAACTATTTCCGACAATTGTATCAATGGCTAGAACAATTGAAGTGATATCGTCTGGAATGTTAGGTAGTCACAGTGGCACTCTGCAGCTGATGTACAAAGAGTTGCAGCTGCTTTCTCCATTAGTACCAACTCGAGAGTTCTACTTCCTTCGTTATTGTCATCAAATTGAGCAAGGCCATTGGGCAATTGTTGATGTTTCTTATGATTTTCCACGAGATAACCAGTTTGCAAATCAATCTCGATCTCATAGGCTTCCTTCTGGATGCTTGATTCAAGACATGCCTAATGGATATTCCAAGGTTACTTGGGTGGAACATGTTGAAATAGAAGAGAAAGCCCCAATTCATCGACTTTATAGAGATCTAATTCACAGTGGACAAGCATTTGGAGCTGAACGTTGGCTTGTTGCTCTTCAGAGAATGTGCGAAAGATATGCATGCCTAATGGTTTCAGGCACTTCTACTAGAGATCTTGAAGGAGTGATCCCGTCACCTGAAGGCAAGAGAAGCATGATGAAACTTGCCCAAAGGATGGTCAACAACTTCTGTGCAAGCATTAGCACATCTAATGGCCATCGGTGGACCACAATTTCTGGTATGAACGAGGTTGGAGTGCGAGTAACCATCCATAAGAGCACGGATCCTGGTCAACCCAATGGTGTGGTTCTTAGTGCAGCTACTACCATTTGGCTCCCACTATCTCCACAAACTGTCTTCAATTTCTTCAAGGATGAAAGAACTCGACCTCAGTGGGATGTCCTTTCCAATGGCAATGCAGTGCAAGAAGTTGCCCATATAGCAAATGGTTCTCATCCAGGGAACTGCATATCTGTTCTTCGAGCCTTCAACACTAGCCAGAACAACATGTTGATACTCCAGGAGAGTTGCATAGACTCATCAGGGTCTCTAGTTGTGTACTGCCCCGTTGATCTTCCAGCCATCAACATCGCAATGAGCGGCGAGGATCCTTCATACATTCCTCTGCTGCCATCAGGATTCACCATTACACCTGATGGGCGGCAAGACCAAGGGGACACATCTGCATCGACAAGTAGTTGTTCTAACATAAACCACATAGGAGGCAGTGGCTCACTGATTACAGTGGCATTTCAAATTCTTGTGAGCAGCTTGCCCTCGGCAAAGTTGAACATGGAGTCGGTGAATACAGTGAACAACCTTATTGGCACCACCGTGCAGCAAATAAAGTCTGCCTTGAATTGTAGTAGTTCCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000902 GO:0000904 GO:0000976 GO:0001067 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007275 GO:0008150 GO:0009653 GO:0009664 GO:0009791 GO:0009827 GO:0009828 GO:0009888 GO:0009889 GO:0009908 GO:0009987 GO:0010026 GO:0010090 GO:0010091 GO:0010468 GO:0010556 GO:0016043 GO:0019219 GO:0019222 GO:0022414 GO:0030154 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0032989 GO:0042545 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044212 GO:0044424 GO:0044464 GO:0045229 GO:0045595 GO:0045596 GO:0048367 GO:0048437 GO:0048468 GO:0048497 GO:0048519 GO:0048523 GO:0048608 GO:0048731 GO:0048856 GO:0048869 GO:0050789 GO:0050793 GO:0050794 GO:0051093 GO:0051171 GO:0051252 GO:0060255 GO:0061458 GO:0065007 GO:0071554 GO:0071555 GO:0071669 GO:0071840 GO:0080090 GO:0090558 GO:0090567 GO:0090626 GO:0090700 GO:0097159 GO:0099402 GO:0140110 GO:1901363 GO:1903506 GO:1990837 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Homeobox START

Protein Analysis

710

Amino Acids

78.56

Weight (kDa)

6.43

Isoelectric Point (pI)

51.18

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Homeodomain	PF00046	20 - 75	7.2e-19	Homeodomain
START	PF01852	219 - 443	4.4e-45	START domain
PDF2_C	PF25797	463 - 706	1.5e-109	PDF2-like, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009078)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G17920 AT1G17920 AT1G73360
fragaria_vesca	FvH4_5g18090 FvH4_5g18090
malus_domestica	MD06G1236400.v1.1 MD14G1243300.v1.1
prunus_persica	Prupe.5G240900_v2.0.a1
pyrus_communis	pycom06g21200 pycom06g21210 pycom14g20460 pycom15g33770
rosa_chinensis	RchiOBHm_Chr7g0177521
rosa_laevigata	RLG00000005530
rosa_multiflora	Rmu_ssc0000330.1_g000002
rosa_roxburghii	Rroxscaffold_3G00275800
rosa_rugosa	Rorug06G0407000
rosa_samantha	Rh7AG006300 Rh7BG006200 Rh7CG006700 Rh7DG006300
rosa_wichuraiana	Rw7G000520

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	2081
AccB7I	CCANNNNNTGG	2 cut(s)	335, 1429
AccBSI	CCGCTC	1 cut(s)	1854
AccI	GTMKAC	1 cut(s)	867
AciI	CCGC	3 cut(s)	12, 1854, 1915
AclI	AACGTT	1 cut(s)	1294
AclWI	GGATC	7 cut(s)	271, 698, 1375, 1532, 1545, 1856, 1869
AcoI	YGGCCR	1 cut(s)	1468
AcsI	RAATTY	3 cut(s)	191, 890, 2010
AcuI	CTGAAG	2 cut(s)	1295, 1413
AfaI	GTAC	5 cut(s)	446, 580, 992, 1023, 1814
AfeI	AGCGCT	1 cut(s)	65
AfiI	CCNNNNNNNGG	4 cut(s)	130, 223, 335, 1429
AflIII	ACRYGT	2 cut(s)	1213, 1761
AjnI	CCWGG	4 cut(s)	776, 1540, 1711, 1773
AleI	CACNNNNGTG	1 cut(s)	2087
Alw21I	GWGCWC	1 cut(s)	1535
Alw26I	GTCTC	2 cut(s)	21, 1806
AlwI	GGATC	7 cut(s)	271, 698, 1375, 1532, 1545, 1856, 1869
Ama87I	CYCGRG	1 cut(s)	1029
Aor51HI	AGCGCT	1 cut(s)	65
AoxI	GGCC	4 cut(s)	225, 455, 1072, 1468
ApeKI	GCWGC	9 cut(s)	437, 659, 982, 1003, 1006, 1571, 1882, 2022, 2092
ApoI	RAATTY	3 cut(s)	191, 890, 2010
AseI	ATTAAT	1 cut(s)	351
Asp700I	GAANNNNTTC	1 cut(s)	903
AspLEI	GCGC	1 cut(s)	66
AspS9I	GGNCC	5 cut(s)	226, 456, 545, 880, 1479
AsuC2I	CCSGG	2 cut(s)	131, 573
AsuHPI	GGTGA	4 cut(s)	119, 1380, 1888, 2068
AvaI	CYCGRG	1 cut(s)	1029
AvaII	GGWCC	3 cut(s)	545, 880, 1479
BaeI	ACNNNNGTAYC	2 cut(s)	900, 933
BalI	TGGCCA	1 cut(s)	1470
BamHI	GGATCC	2 cut(s)	1537, 1861
BanI	GGYRCC	1 cut(s)	2081
BarI	GAAGNNNNNNTAC	2 cut(s)	50, 82
BauI	CACGAG	1 cut(s)	1110
BbsI	GAAGAC	1 cut(s)	1603
Bbv12I	GWGCWC	1 cut(s)	1535
BbvI	GCAGC	9 cut(s)	424, 646, 993, 994, 1015, 1583, 1869, 2034, 2104
BcgI	CGANNNNNNTGC	2 cut(s)	1313, 1347
BciT130I	CCWGG	4 cut(s)	778, 1542, 1713, 1775
BcnI	CCSGG	2 cut(s)	131, 573
BcoDI	GTCTC	2 cut(s)	21, 1806
BfaI	CTAG	8 cut(s)	416, 429, 597, 825, 927, 1362, 1749, 1805
BfmI	CTRYAG	1 cut(s)	980
BfoI	RGCGCY	1 cut(s)	67
BglII	AGATCT	2 cut(s)	1258, 1366
BlpI	GCTNAGC	1 cut(s)	856
BmcAI	AGTACT	1 cut(s)	580
Bme1390I	CCNGG	6 cut(s)	131, 573, 778, 1542, 1713, 1775
Bme18I	GGWCC	3 cut(s)	545, 880, 1479
BmeT110I	CYCGRG	1 cut(s)	1029
BmgT120I	GGNCC	5 cut(s)	226, 456, 545, 880, 1479
BmiI	GGNNCC	8 cut(s)	19, 177, 200, 882, 1539, 1589, 1863, 2083
BmrFI	CCNGG	6 cut(s)	131, 573, 778, 1542, 1713, 1775
BmrI	ACTGGG	1 cut(s)	176
BmsI	GCATC	3 cut(s)	830, 1151, 1949
BmuI	ACTGGG	1 cut(s)	176
BpiI	GAAGAC	1 cut(s)	1603
BplI	GAGNNNNNCTC	2 cut(s)	294, 326
BpmI	CTGGAG	1 cut(s)	1757
Bpu10I	CCTNAGC	1 cut(s)	683
Bpu1102I	GCTNAGC	1 cut(s)	856
BpuMI	CCSGG	2 cut(s)	131, 573
BsaBI	GATNNNNATC	1 cut(s)	561
BsaI	GGTCTC	2 cut(s)	21, 1806
BsaJI	CCNNGG	7 cut(s)	572, 776, 777, 1194, 1712, 1924, 2031
BsaWI	WCCGGW	2 cut(s)	20, 207
BsaXI	ACNNNNNCTCC	2 cut(s)	1500, 1530
Bsc4I	CCNNNNNNNGG	4 cut(s)	130, 223, 335, 1429
Bse1I	ACTGG	3 cut(s)	171, 476, 1120
Bse3DI	GCAATG	4 cut(s)	291, 675, 1675, 1854
Bse8I	GATNNNNATC	1 cut(s)	561
BseBI	CCWGG	4 cut(s)	778, 1542, 1713, 1775
BseDI	CCNNGG	7 cut(s)	572, 776, 777, 1194, 1712, 1924, 2031
BseJI	GATNNNNATC	1 cut(s)	561
BseLI	CCNNNNNNNGG	4 cut(s)	130, 223, 335, 1429
BseMI	GCAATG	4 cut(s)	291, 675, 1675, 1854
BseMII	CTCAG	4 cut(s)	54, 413, 479, 1658
BseNI	ACTGG	3 cut(s)	171, 476, 1120
BseRI	GAGGAG	1 cut(s)	168
BseXI	GCAGC	9 cut(s)	424, 646, 993, 994, 1015, 1583, 1869, 2034, 2104
BsgI	GTGCAG	2 cut(s)	1590, 2111
BshFI	GGCC	4 cut(s)	227, 457, 1074, 1470
BshNI	GGYRCC	1 cut(s)	2081
BsiHKAI	GWGCWC	1 cut(s)	1535
BsiHKCI	CYCGRG	1 cut(s)	1029
BsiSI	CCGG	4 cut(s)	21, 131, 208, 572
BslFI	GGGAC	3 cut(s)	326, 625, 1943
BslI	CCNNNNNNNGG	4 cut(s)	130, 223, 335, 1429
BsmAI	GTCTC	2 cut(s)	21, 1806
BsmFI	GGGAC	3 cut(s)	326, 625, 1943
BsnI	GGCC	4 cut(s)	227, 457, 1074, 1470
Bso31I	GGTCTC	2 cut(s)	21, 1806
BsoBI	CYCGRG	1 cut(s)	1029
Bsp1286I	GDGCHC	1 cut(s)	1535
Bsp1407I	TGTACA	1 cut(s)	990
Bsp1720I	GCTNAGC	1 cut(s)	856
BspACI	CCGC	3 cut(s)	12, 1854, 1915
BspANI	GGCC	4 cut(s)	227, 457, 1074, 1470
BspCNI	CTCAG	4 cut(s)	53, 412, 478, 1657
BspHI	TCATGA	2 cut(s)	645, 846
BspLI	GGNNCC	8 cut(s)	19, 177, 200, 882, 1539, 1589, 1863, 2083
BspMAI	CTGCAG	1 cut(s)	984
BspPI	GGATC	7 cut(s)	271, 698, 1375, 1532, 1545, 1856, 1869
BspQI	GCTCTTC	2 cut(s)	405, 1314
BspT107I	GGYRCC	1 cut(s)	2081
BspTNI	GGTCTC	2 cut(s)	21, 1806
BsrBI	CCGCTC	1 cut(s)	1854
BsrDI	GCAATG	4 cut(s)	291, 675, 1675, 1854
BsrGI	TGTACA	1 cut(s)	990
BsrI	ACTGG	3 cut(s)	171, 476, 1120
BssECI	CCNNGG	7 cut(s)	572, 776, 777, 1194, 1712, 1924, 2031
BssSI	CACGAG	1 cut(s)	1110
BssT1I	CCWWGG	2 cut(s)	1194, 1924
Bst2BI	CACGAG	1 cut(s)	1110
Bst2UI	CCWGG	4 cut(s)	778, 1542, 1713, 1775
Bst4CI	ACNGT	6 cut(s)	971, 1271, 1609, 1999, 2065, 2089
Bst6I	CTCTTC	4 cut(s)	405, 669, 1221, 1314
BstAPI	GCANNNNNTGC	1 cut(s)	148
BstAUI	TGTACA	1 cut(s)	990
BstC8I	GCNNGC	3 cut(s)	1336, 1450, 2027
BstDEI	CTNAG	8 cut(s)	40, 399, 465, 683, 809, 856, 1565, 1644
BstH2I	RGCGCY	1 cut(s)	67
BstHHI	GCGC	1 cut(s)	66
BstMAI	GTCTC	2 cut(s)	21, 1806
BstMWI	GCNNNNNNNGC	8 cut(s)	148, 601, 610, 665, 827, 1286, 1404, 1694
BstNI	CCWGG	4 cut(s)	778, 1542, 1713, 1775
BstNSI	RCATGY	4 cut(s)	1180, 1217, 1338, 1765
BstSCI	CCNGG	6 cut(s)	129, 571, 776, 1540, 1711, 1773
BstSFI	CTRYAG	1 cut(s)	980
BstV1I	GCAGC	9 cut(s)	424, 646, 993, 994, 1015, 1583, 1869, 2034, 2104
BstV2I	GAAGAC	1 cut(s)	1603
BstX2I	RGATCY	5 cut(s)	276, 1258, 1366, 1537, 1861
BstXI	CCANNNNNNTGG	2 cut(s)	617, 1558
BstYI	RGATCY	5 cut(s)	276, 1258, 1366, 1537, 1861
BsuRI	GGCC	4 cut(s)	227, 457, 1074, 1470
BtgZI	GCGATG	2 cut(s)	122, 1828
BtsI	GCAGTG	2 cut(s)	1680, 1987
BtsIMutI	CAGTG	8 cut(s)	976, 1276, 1652, 1680, 1987, 1988, 2004, 2070
Cac8I	GCNNGC	3 cut(s)	1336, 1450, 2027
CciI	TCATGA	2 cut(s)	645, 846
CfoI	GCGC	1 cut(s)	66
Cfr13I	GGNCC	5 cut(s)	226, 456, 545, 880, 1479
Csp6I	GTAC	5 cut(s)	445, 579, 991, 1022, 1813
CviQI	GTAC	5 cut(s)	445, 579, 991, 1022, 1813
DdeI	CTNAG	8 cut(s)	40, 399, 465, 683, 809, 856, 1565, 1644
EaeI	YGGCCR	1 cut(s)	1468
Eam1104I	CTCTTC	4 cut(s)	405, 669, 1221, 1314
EarI	CTCTTC	4 cut(s)	405, 669, 1221, 1314
Eco130I	CCWWGG	2 cut(s)	1194, 1924
Eco31I	GGTCTC	2 cut(s)	21, 1806
Eco32I	GATATC	1 cut(s)	945
Eco47I	GGWCC	3 cut(s)	545, 880, 1479
Eco47III	AGCGCT	1 cut(s)	65
Eco57I	CTGAAG	2 cut(s)	1295, 1413
Eco88I	CYCGRG	1 cut(s)	1029
EcoRII	CCWGG	4 cut(s)	776, 1540, 1711, 1773
EcoRV	GATATC	1 cut(s)	945
EcoT14I	CCWWGG	2 cut(s)	1194, 1924
EcoT22I	ATGCAT	1 cut(s)	1336
ErhI	CCWWGG	2 cut(s)	1194, 1924
FalI	AAGNNNNNCTT	4 cut(s)	666, 698, 2093, 2125
FaqI	GGGAC	3 cut(s)	326, 625, 1943
FblI	GTMKAC	1 cut(s)	867
FspBI	CTAG	8 cut(s)	416, 429, 597, 825, 927, 1362, 1749, 1805
GlaI	GCGC	1 cut(s)	65
GsuI	CTGGAG	1 cut(s)	1757
HaeII	RGCGCY	1 cut(s)	67
HaeIII	GGCC	4 cut(s)	227, 457, 1074, 1470
HapII	CCGG	4 cut(s)	21, 131, 208, 572
HhaI	GCGC	1 cut(s)	66
Hin6I	GCGC	1 cut(s)	64
HinP1I	GCGC	1 cut(s)	64
HincII	GTYRAC	3 cut(s)	868, 1435, 1547
HindII	GTYRAC	3 cut(s)	868, 1435, 1547
HinfI	GANTC	6 cut(s)	44, 91, 1168, 1790, 1893, 2051
HpaII	CCGG	4 cut(s)	21, 131, 208, 572
HphI	GGTGA	4 cut(s)	119, 1380, 1888, 2068
Hpy166II	GTNNAC	7 cut(s)	868, 1274, 1435, 1479, 1547, 1813, 2068
Hpy188I	TCNGA	8 cut(s)	43, 96, 265, 281, 302, 628, 909, 1314
Hpy8I	GTNNAC	7 cut(s)	868, 1274, 1435, 1479, 1547, 1813, 2068
HpyAV	CCTTC	9 cut(s)	48, 217, 558, 1055, 1164, 1367, 1388, 1750, 1875
HpyCH4III	ACNGT	6 cut(s)	971, 1271, 1609, 1999, 2065, 2089
HpyCH4IV	ACGT	1 cut(s)	1294
HpyF10VI	GCNNNNNNNGC	8 cut(s)	148, 601, 610, 665, 827, 1286, 1404, 1694
HpyF3I	CTNAG	8 cut(s)	40, 399, 465, 683, 809, 856, 1565, 1644
HpySE526I	ACGT	1 cut(s)	1294
HspAI	GCGC	1 cut(s)	64
LguI	GCTCTTC	2 cut(s)	405, 1314
LmnI	GCTCC	5 cut(s)	23, 181, 474, 1286, 1593
Lsp1109I	GCAGC	9 cut(s)	424, 646, 993, 994, 1015, 1583, 1869, 2034, 2104
LweI	GCATC	3 cut(s)	830, 1151, 1949
MaeI	CTAG	8 cut(s)	416, 429, 597, 825, 927, 1362, 1749, 1805
MaeII	ACGT	1 cut(s)	1294
MaeIII	GTNAC	5 cut(s)	74, 965, 1198, 1386, 1516
MbiI	CCGCTC	1 cut(s)	1854
MfeI	CAATTG	3 cut(s)	912, 933, 1083
MflI	RGATCY	5 cut(s)	276, 1258, 1366, 1537, 1861
MhlI	GDGCHC	1 cut(s)	1535
MlsI	TGGCCA	1 cut(s)	1470
MluNI	TGGCCA	1 cut(s)	1470
MlyI	GAGTC	3 cut(s)	38, 1784, 2060
MmeI	TCCRAC	2 cut(s)	932, 1486
Mox20I	TGGCCA	1 cut(s)	1470
Mph1103I	ATGCAT	1 cut(s)	1336
MroXI	GAANNNNTTC	1 cut(s)	903
MscI	TGGCCA	1 cut(s)	1470
MseI	TTAA	2 cut(s)	351, 747
MslI	CAYNNNNRTG	4 cut(s)	132, 875, 1847, 2087
Msp20I	TGGCCA	1 cut(s)	1470
MspA1I	CMGCKG	2 cut(s)	985, 1006
MspI	CCGG	4 cut(s)	21, 131, 208, 572
MspR9I	CCNGG	6 cut(s)	131, 573, 778, 1542, 1713, 1775
MunI	CAATTG	3 cut(s)	912, 933, 1083
MvaI	CCWGG	4 cut(s)	778, 1542, 1713, 1775
MwoI	GCNNNNNNNGC	8 cut(s)	148, 601, 610, 665, 827, 1286, 1404, 1694
NciI	CCSGG	2 cut(s)	131, 573
NlaIV	GGNNCC	8 cut(s)	19, 177, 200, 882, 1539, 1589, 1863, 2083
NmeAIII	GCCGAG	1 cut(s)	2012
NmuCI	GTSAC	3 cut(s)	74, 965, 1386
NsiI	ATGCAT	1 cut(s)	1336
NspI	RCATGY	4 cut(s)	1180, 1217, 1338, 1765
OliI	CACNNNNGTG	1 cut(s)	2087
PaeI	GCATGC	1 cut(s)	1338
PaeR7I	CTCGAG	1 cut(s)	1029
PagI	TCATGA	2 cut(s)	645, 846
PasI	CCCWGGG	1 cut(s)	777
PciI	ACATGT	2 cut(s)	1213, 1761
PciSI	GCTCTTC	2 cut(s)	405, 1314
PdmI	GAANNNNTTC	1 cut(s)	903
PfeI	GAWTC	3 cut(s)	91, 1168, 1893
PflMI	CCANNNNNTGG	2 cut(s)	335, 1429
PfoI	TCCNGGA	1 cut(s)	1773
PleI	GAGTC	3 cut(s)	38, 1784, 2059
PpsI	GAGTC	3 cut(s)	38, 1784, 2059
PscI	ACATGT	2 cut(s)	1213, 1761
PshBI	ATTAAT	1 cut(s)	351
Psp1406I	AACGTT	1 cut(s)	1294
Psp6I	CCWGG	4 cut(s)	776, 1540, 1711, 1773
PspGI	CCWGG	4 cut(s)	776, 1540, 1711, 1773
PspN4I	GGNNCC	8 cut(s)	19, 177, 200, 882, 1539, 1589, 1863, 2083
PspPI	GGNCC	5 cut(s)	226, 456, 545, 880, 1479
PstI	CTGCAG	1 cut(s)	984
PsuI	RGATCY	5 cut(s)	276, 1258, 1366, 1537, 1861
PvuII	CAGCTG	2 cut(s)	985, 1006
RsaI	GTAC	5 cut(s)	446, 580, 992, 1023, 1814
RsaNI	GTAC	5 cut(s)	445, 579, 991, 1022, 1813
RseI	CAYNNNNRTG	4 cut(s)	132, 875, 1847, 2087
SalI	GTCGAC	1 cut(s)	866
SapI	GCTCTTC	2 cut(s)	405, 1314
SaqAI	TTAA	2 cut(s)	351, 747
Sau96I	GGNCC	5 cut(s)	226, 456, 545, 880, 1479
ScaI	AGTACT	1 cut(s)	580
SchI	GAGTC	3 cut(s)	38, 1784, 2060
ScrFI	CCNGG	6 cut(s)	131, 573, 778, 1542, 1713, 1775
SduI	GDGCHC	1 cut(s)	1535
SfaNI	GCATC	3 cut(s)	830, 1151, 1949
SfcI	CTRYAG	1 cut(s)	980
Sfr274I	CTCGAG	1 cut(s)	1029
SinI	GGWCC	3 cut(s)	545, 880, 1479
SlaI	CTCGAG	1 cut(s)	1029
SmiMI	CAYNNNNRTG	4 cut(s)	132, 875, 1847, 2087
SmlI	CTYRAG	1 cut(s)	1029
SmoI	CTYRAG	1 cut(s)	1029
SphI	GCATGC	1 cut(s)	1338
SsiI	CCGC	3 cut(s)	12, 1854, 1915
SspMI	CTAG	8 cut(s)	416, 429, 597, 825, 927, 1362, 1749, 1805
StyD4I	CCNGG	6 cut(s)	129, 571, 776, 1540, 1711, 1773
StyI	CCWWGG	2 cut(s)	1194, 1924
TaaI	ACNGT	6 cut(s)	971, 1271, 1609, 1999, 2065, 2089
TaiI	ACGT	1 cut(s)	1297
TaqI	TCGA	8 cut(s)	259, 867, 1030, 1138, 1246, 1639, 1735, 1943
TatI	WGTACW	4 cut(s)	444, 578, 990, 1812
TauI	GCSGC	2 cut(s)	1857, 1918
TfiI	GAWTC	3 cut(s)	91, 1168, 1893
Tru1I	TTAA	2 cut(s)	351, 747
Tru9I	TTAA	2 cut(s)	351, 747
TscAI	CASTG	8 cut(s)	976, 1276, 1652, 1680, 1987, 1995, 2004, 2070
TseFI	GTSAC	3 cut(s)	74, 965, 1386
TseI	GCWGC	9 cut(s)	437, 659, 982, 1003, 1006, 1571, 1882, 2022, 2092
Tsp45I	GTSAC	3 cut(s)	74, 965, 1386
TspGWI	ACGGA	1 cut(s)	1550
TspRI	CASTG	8 cut(s)	976, 1276, 1652, 1680, 1987, 1995, 2004, 2070
Van91I	CCANNNNNTGG	2 cut(s)	335, 1429
VpaK11BI	GGWCC	3 cut(s)	545, 880, 1479
VspI	ATTAAT	1 cut(s)	351
XapI	RAATTY	3 cut(s)	191, 890, 2010
XbaI	TCTAGA	1 cut(s)	824
XceI	RCATGY	4 cut(s)	1180, 1217, 1338, 1765
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1697
XhoI	CTCGAG	1 cut(s)	1029
XmiI	GTMKAC	1 cut(s)	867
XmnI	GAANNNNTTC	1 cut(s)	903
XspI	CTAG	8 cut(s)	416, 429, 597, 825, 927, 1362, 1749, 1805
ZrmI	AGTACT	1 cut(s)	580
Zsp2I	ATGCAT	1 cut(s)	1336

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.