Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr1

Orthogroup ID

OG0009078

Physical Location & Seq

Genomic Coordinates Forward (+)

68332041 .. 68335228

Gene Structure 3188 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000005530

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2256 bp

ATGGAGTTTGGCAGCGGAGCAGGCGGTGGCTCCGGTGGAGACCACGATGCCTCAGACTCTCAAAGAAGGAAGAAGCGCTACCATCGTCACACTGCTAACCAGATTCAGAGGCTTGAAGGGATGTTCAAGGACTGCCCTCACCCGGATGAAAAGCAAAGGTTGCAGTTGAGCAGAGAACTGGGCTTGGCTCCTCGCCAGATCAAGTTTTGGTTTCAAAACCGGAGAACCCAGATGAAGGCCCAGCATGAAAGAGCTGATAACTCTGCGCTTCGATCAGAGAATGACAAGATCCGATGTGAGAACATTGCCATCCGAGAGGCACTTAAAAATGTGATTTGCCCATCTTGCGGTGTCCCCCCCATTAATGAAGATAATTATTTCGATGAACACAAATTGCGAATGGAGAACGCCCAACTGAAAGAAGAGGTAACAATCACCTACTTAAATTGGCATATACAAGGTCAATTCGATTGTGTGAAGCTGTATAGCTTGATAAGAATTTTGTTATTCATTTTGGGTTGTTGGTGTGATGTTTTGCAGCTAGATAGAGTCTCTAGTATTGCTGCCAAGTACATTGGGAGGCCCATTTCTCAGCTCCCACCAGTTCAGCCTATTCATATATCTCCTTTGGATTTATCAATGGCGAGTTTTGGGGGGCATGGAATGGGTGGTCCTTCTCTTGATCTTGATCTTCTTACAGGGAGTACTTCATCTACCATGCCCAGTTTGCCGTACCAGCCTATGGGCATTTCAGACATGGACAAGTCCCTCATGACAGATATCGCTGCAAATGCAATGGAAGAGTTGCTTAGGCTTTTGCAGACCAATGATCCTCTGTGGATGAGGTCATCCACTGATGGCAGGGATGTTCTTAATCTTGAAAGCTATGAGAGGATTTTCCCCAGGGCTACTACTCATTTGAAATATCCCAATCTTAGAATTGAAGCATCTAGAGCTTCTGGTGTGGTAATCATGAATGGTTTAGCATTAGTCGACATGATTATGGACTCGAACAAATTTGGGGAGCTATTTCCGACAATTGTCTCAATGGCTAGAACAATTGAAGTGATATCGTCTGGAATGTTAGGTAGTCACAGCGGCTCTCTGCAGCTGATGTACAAAGAGTTGCAGGTGCTTTCACCATTAGTACCAACTCGAGAGTTCTACTTCCTTCGTTATTGTCACCAAATTGAGCAAGGCCATTGGGCCATTGTTGATGTTTCTTATGATTTTCCACGAGATAATCAGTTTACAAATCAATGTCGGTCTCATAGGCTTCCTTCTGGATGCTTGATTCAAGACATGCCTAATGGATATTCCAAGGTTACTTGGGTGGAACACGTTGAAATAGAAGAGAAAGCCCCAATTCATCGACTTTATAGAGATCTTATTCACAGTGGACAAGCATTTGGAGCTGAACGATGGCTTGTTGTTCTTCAGAGAATGTGTGAAAGATTTGCATGCCTAATGGTGTCAGGCACTTCTACTAGAGATCTTGAAGGAGTGATCCCATCACCTGAAGGCAAGAGAAGCATGATGAAACTTGCCCAAAGGATGGTCAACAACTTCTGTGCAAGCATTAGCACATCTAATGGCCATCGGTGGACCACAATTTCTGGTATGCACGAAGTTGGAGTGCGAGTGACCATCCATAAGAGCACGGATCCTGGTAAGCCCAATGGTGTGGTTCTTAGTGCAGCTACTACCATTTGGCTCCCACTATCTCCGCAAACTGTCTTCAATTTCTTCAAGGATGAAAGAACTCGACCTCAGTGGGATGTCCTTTCCAATGGCAATGCAGTGCAAGAGGTCGCCCATATAGCAAATGGTTCGCATCCAGGGAACTGCATATCTGTTCTTCGAGCTTTCAACACTAGCCAGAACAACATGTTAATACTCCAAGAGAGCTGTATAGACTCCTCGGGGTCAGTAGTTGTGTACTGCCCCGTTGATCTTCCAGCCATTAACATTGCAATGAGCGGCGAGGATCCTTCATACATTCCTCTGCTGCCATCAGGTTTCACCATTTCACCTGATGGGCCGCAAGACCAAGGGGACACATCTGCATCGACAAGTAGTTGTTCTAACGTAAACCACATAGGAGGTGGTGGATCACTGATTACAGTGGCATTTCAAATTCTAGTGAGCAGCTTGCCCTCGGCAAAGTTGAACATGGAGTCGGTGAATACAGTTAATAACCTTATTGGCACCACTGTGCAGCAAATAAAGTCCGCCTTAAATTGTAGTGGTTCCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000902 GO:0000904 GO:0000976 GO:0001067 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007275 GO:0008150 GO:0009653 GO:0009664 GO:0009791 GO:0009827 GO:0009828 GO:0009888 GO:0009889 GO:0009908 GO:0009987 GO:0010026 GO:0010090 GO:0010091 GO:0010468 GO:0010556 GO:0016043 GO:0019219 GO:0019222 GO:0022414 GO:0030154 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0032989 GO:0042545 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044212 GO:0044424 GO:0044464 GO:0045229 GO:0045595 GO:0045596 GO:0048367 GO:0048437 GO:0048468 GO:0048497 GO:0048519 GO:0048523 GO:0048608 GO:0048731 GO:0048856 GO:0048869 GO:0050789 GO:0050793 GO:0050794 GO:0051093 GO:0051171 GO:0051252 GO:0060255 GO:0061458 GO:0065007 GO:0071554 GO:0071555 GO:0071669 GO:0071840 GO:0080090 GO:0090558 GO:0090567 GO:0090626 GO:0090700 GO:0097159 GO:0099402 GO:0140110 GO:1901363 GO:1903506 GO:1990837 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Homeobox START

Protein Analysis

752

Amino Acids

83.33

Weight (kDa)

6.45

Isoelectric Point (pI)

50.37

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Homeodomain	PF00046	24 - 79	1.7e-18	Homeodomain
START	PF01852	261 - 485	8.9e-45	START domain
PDF2_C	PF25797	505 - 748	1.1e-108	PDF2-like, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009078)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G17920 AT1G17920 AT1G73360
fragaria_vesca	FvH4_5g18090 FvH4_5g18090
malus_domestica	MD06G1236400.v1.1 MD14G1243300.v1.1
prunus_persica	Prupe.5G240900_v2.0.a1
pyrus_communis	pycom06g21200 pycom06g21210 pycom14g20460 pycom15g33770
rosa_chinensis	RchiOBHm_Chr7g0177521
rosa_laevigata	RLG00000005530
rosa_multiflora	Rmu_ssc0000330.1_g000002
rosa_roxburghii	Rroxscaffold_3G00275800
rosa_rugosa	Rorug06G0407000
rosa_samantha	Rh7AG006300 Rh7BG006200 Rh7CG006700 Rh7DG006300
rosa_wichuraiana	Rw7G000520

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1120
Acc36I	ACCTGC	1 cut(s)	1120
AccB1I	GGYRCC	1 cut(s)	2207
AccB7I	CCANNNNNTGG	2 cut(s)	742, 1555
AccBSI	CCGCTC	1 cut(s)	1980
AccI	GTMKAC	1 cut(s)	993
AciI	CCGC	8 cut(s)	15, 24, 348, 1098, 1727, 1980, 2042, 2232
AclWI	GGATC	8 cut(s)	283, 824, 1501, 1658, 1671, 1982, 1995, 2119
AcoI	YGGCCR	1 cut(s)	1594
AcsI	RAATTY	3 cut(s)	498, 1016, 2136
AcuI	CTGAAG	2 cut(s)	1421, 1539
AfaI	GTAC	6 cut(s)	572, 706, 734, 1118, 1149, 1940
AfeI	AGCGCT	1 cut(s)	77
AfiI	CCNNNNNNNGG	5 cut(s)	142, 235, 347, 742, 1555
AflIII	ACRYGT	2 cut(s)	1339, 1887
AjnI	CCWGG	3 cut(s)	902, 1666, 1837
AleI	CACNNNNGTG	1 cut(s)	2213
Alw21I	GWGCWC	1 cut(s)	1661
Alw26I	GTCTC	4 cut(s)	33, 556, 1048, 1272
AlwI	GGATC	8 cut(s)	283, 824, 1501, 1658, 1671, 1982, 1995, 2119
Ama87I	CYCGRG	2 cut(s)	1155, 1921
Aor51HI	AGCGCT	1 cut(s)	77
AoxI	GGCC	6 cut(s)	237, 581, 1198, 1206, 1594, 2039
ApeKI	GCWGC	9 cut(s)	12, 538, 563, 785, 1108, 1697, 2008, 2148, 2218
ApoI	RAATTY	3 cut(s)	498, 1016, 2136
AseI	ATTAAT	1 cut(s)	363
AspLEI	GCGC	2 cut(s)	78, 268
AspS9I	GGNCC	6 cut(s)	238, 582, 671, 1206, 1605, 2039
AsuC2I	CCSGG	1 cut(s)	143
AsuHPI	GGTGA	8 cut(s)	131, 427, 1131, 1175, 1506, 2014, 2022, 2194
AvaI	CYCGRG	2 cut(s)	1155, 1921
AvaII	GGWCC	2 cut(s)	671, 1605
BalI	TGGCCA	1 cut(s)	1596
BamHI	GGATCC	2 cut(s)	1663, 1987
BanI	GGYRCC	1 cut(s)	2207
BarI	GAAGNNNNNNTAC	2 cut(s)	62, 94
BauI	CACGAG	1 cut(s)	1236
BbsI	GAAGAC	1 cut(s)	1729
Bbv12I	GWGCWC	1 cut(s)	1661
BbvI	GCAGC	9 cut(s)	24, 550, 550, 772, 1120, 1709, 1995, 2160, 2230
BceAI	ACGGC	1 cut(s)	715
BcgI	CGANNNNNNTGC	2 cut(s)	1812, 1846
BciT130I	CCWGG	3 cut(s)	904, 1668, 1839
BcnI	CCSGG	1 cut(s)	143
BcoDI	GTCTC	4 cut(s)	33, 556, 1048, 1272
BfaI	CTAG	7 cut(s)	542, 555, 951, 1053, 1488, 1875, 2141
BfmI	CTRYAG	1 cut(s)	1106
BfoI	RGCGCY	1 cut(s)	79
BfuAI	ACCTGC	1 cut(s)	1120
BglII	AGATCT	2 cut(s)	1384, 1492
BmcAI	AGTACT	1 cut(s)	706
Bme1390I	CCNGG	4 cut(s)	143, 904, 1668, 1839
Bme18I	GGWCC	2 cut(s)	671, 1605
BmeT110I	CYCGRG	2 cut(s)	1155, 1921
BmgT120I	GGNCC	6 cut(s)	238, 582, 671, 1206, 1605, 2039
BmiI	GGNNCC	7 cut(s)	31, 189, 1665, 1715, 1989, 2209, 2251
BmrFI	CCNGG	4 cut(s)	143, 904, 1668, 1839
BmrI	ACTGGG	2 cut(s)	188, 717
BmsI	GCATC	5 cut(s)	37, 956, 1277, 1843, 2075
BmuI	ACTGGG	2 cut(s)	188, 717
BoxI	GACNNNNGTC	1 cut(s)	1040
BpiI	GAAGAC	1 cut(s)	1729
Bpu10I	CCTNAGC	1 cut(s)	809
BpuMI	CCSGG	1 cut(s)	143
BsaBI	GATNNNNATC	1 cut(s)	687
BsaI	GGTCTC	2 cut(s)	33, 1272
BsaJI	CCNNGG	7 cut(s)	902, 903, 1320, 1838, 1920, 2050, 2157
BsaWI	WCCGGW	2 cut(s)	32, 219
BsaXI	ACNNNNNCTCC	2 cut(s)	1626, 1656
Bsc4I	CCNNNNNNNGG	5 cut(s)	142, 235, 347, 742, 1555
Bse1I	ACTGG	3 cut(s)	183, 602, 723
Bse3DI	GCAATG	5 cut(s)	303, 801, 1801, 1968, 1980
Bse8I	GATNNNNATC	1 cut(s)	687
BseBI	CCWGG	3 cut(s)	904, 1668, 1839
BseDI	CCNNGG	7 cut(s)	902, 903, 1320, 1838, 1920, 2050, 2157
BseJI	GATNNNNATC	1 cut(s)	687
BseLI	CCNNNNNNNGG	5 cut(s)	142, 235, 347, 742, 1555
BseMI	GCAATG	5 cut(s)	303, 801, 1801, 1968, 1980
BseMII	CTCAG	3 cut(s)	66, 605, 1784
BseNI	ACTGG	3 cut(s)	183, 602, 723
BseRI	GAGGAG	2 cut(s)	180, 1909
BseXI	GCAGC	9 cut(s)	24, 550, 550, 772, 1120, 1709, 1995, 2160, 2230
BseYI	CCCAGC	1 cut(s)	240
BsgI	GTGCAG	2 cut(s)	1716, 2237
BshFI	GGCC	6 cut(s)	239, 583, 1200, 1208, 1596, 2041
BshNI	GGYRCC	1 cut(s)	2207
BsiHKAI	GWGCWC	1 cut(s)	1661
BsiHKCI	CYCGRG	2 cut(s)	1155, 1921
BsiSI	CCGG	3 cut(s)	33, 143, 220
BslFI	GGGAC	3 cut(s)	338, 751, 2069
BslI	CCNNNNNNNGG	5 cut(s)	142, 235, 347, 742, 1555
BsmAI	GTCTC	4 cut(s)	33, 556, 1048, 1272
BsmFI	GGGAC	3 cut(s)	338, 751, 2069
BsnI	GGCC	6 cut(s)	239, 583, 1200, 1208, 1596, 2041
Bso31I	GGTCTC	2 cut(s)	33, 1272
BsoBI	CYCGRG	2 cut(s)	1155, 1921
Bsp1286I	GDGCHC	1 cut(s)	1661
Bsp1407I	TGTACA	1 cut(s)	1116
BspACI	CCGC	8 cut(s)	15, 24, 348, 1098, 1727, 1980, 2042, 2232
BspANI	GGCC	6 cut(s)	239, 583, 1200, 1208, 1596, 2041
BspCNI	CTCAG	3 cut(s)	65, 604, 1783
BspHI	TCATGA	2 cut(s)	771, 972
BspLI	GGNNCC	7 cut(s)	31, 189, 1665, 1715, 1989, 2209, 2251
BspMAI	CTGCAG	1 cut(s)	1110
BspMI	ACCTGC	1 cut(s)	1120
BspPI	GGATC	8 cut(s)	283, 824, 1501, 1658, 1671, 1982, 1995, 2119
BspT107I	GGYRCC	1 cut(s)	2207
BspTNI	GGTCTC	2 cut(s)	33, 1272
BsrBI	CCGCTC	1 cut(s)	1980
BsrDI	GCAATG	5 cut(s)	303, 801, 1801, 1968, 1980
BsrGI	TGTACA	1 cut(s)	1116
BsrI	ACTGG	3 cut(s)	183, 602, 723
BssECI	CCNNGG	7 cut(s)	902, 903, 1320, 1838, 1920, 2050, 2157
BssSI	CACGAG	1 cut(s)	1236
BssT1I	CCWWGG	2 cut(s)	1320, 2050
Bst2BI	CACGAG	1 cut(s)	1236
Bst2UI	CCWGG	3 cut(s)	904, 1668, 1839
Bst4CI	ACNGT	5 cut(s)	1397, 1735, 2125, 2191, 2215
Bst6I	CTCTTC	3 cut(s)	417, 795, 1347
BstAPI	GCANNNNNTGC	1 cut(s)	160
BstAUI	TGTACA	1 cut(s)	1116
BstC8I	GCNNGC	4 cut(s)	22, 1462, 1576, 2153
BstDEI	CTNAG	6 cut(s)	52, 591, 809, 935, 1691, 1770
BstH2I	RGCGCY	1 cut(s)	79
BstHHI	GCGC	2 cut(s)	78, 268
BstMAI	GTCTC	4 cut(s)	33, 556, 1048, 1272
BstNI	CCWGG	3 cut(s)	904, 1668, 1839
BstNSI	RCATGY	3 cut(s)	1306, 1464, 1891
BstPAI	GACNNNNGTC	1 cut(s)	1040
BstSCI	CCNGG	4 cut(s)	141, 902, 1666, 1837
BstSFI	CTRYAG	1 cut(s)	1106
BstV1I	GCAGC	9 cut(s)	24, 550, 550, 772, 1120, 1709, 1995, 2160, 2230
BstV2I	GAAGAC	1 cut(s)	1729
BstX2I	RGATCY	5 cut(s)	288, 1384, 1492, 1663, 1987
BstXI	CCANNNNNNTGG	1 cut(s)	1684
BstYI	RGATCY	5 cut(s)	288, 1384, 1492, 1663, 1987
BsuRI	GGCC	6 cut(s)	239, 583, 1200, 1208, 1596, 2041
BtsI	GCAGTG	2 cut(s)	90, 1806
BtsIMutI	CAGTG	8 cut(s)	90, 852, 1402, 1778, 1806, 2114, 2130, 2211
BveI	ACCTGC	1 cut(s)	1120
Cac8I	GCNNGC	4 cut(s)	22, 1462, 1576, 2153
CciI	TCATGA	2 cut(s)	771, 972
CfoI	GCGC	2 cut(s)	78, 268
Cfr13I	GGNCC	6 cut(s)	238, 582, 671, 1206, 1605, 2039
Csp6I	GTAC	6 cut(s)	571, 705, 733, 1117, 1148, 1939
CviQI	GTAC	6 cut(s)	571, 705, 733, 1117, 1148, 1939
DdeI	CTNAG	6 cut(s)	52, 591, 809, 935, 1691, 1770
EaeI	YGGCCR	1 cut(s)	1594
Eam1104I	CTCTTC	3 cut(s)	417, 795, 1347
EarI	CTCTTC	3 cut(s)	417, 795, 1347
EciI	GGCGGA	1 cut(s)	2221
Eco130I	CCWWGG	2 cut(s)	1320, 2050
Eco31I	GGTCTC	2 cut(s)	33, 1272
Eco32I	GATATC	2 cut(s)	781, 1071
Eco47I	GGWCC	2 cut(s)	671, 1605
Eco47III	AGCGCT	1 cut(s)	77
Eco57I	CTGAAG	2 cut(s)	1421, 1539
Eco88I	CYCGRG	2 cut(s)	1155, 1921
EcoRII	CCWGG	3 cut(s)	902, 1666, 1837
EcoRV	GATATC	2 cut(s)	781, 1071
EcoT14I	CCWWGG	2 cut(s)	1320, 2050
ErhI	CCWWGG	2 cut(s)	1320, 2050
FalI	AAGNNNNNCTT	4 cut(s)	792, 824, 2219, 2251
FaqI	GGGAC	3 cut(s)	338, 751, 2069
FblI	GTMKAC	1 cut(s)	993
FspBI	CTAG	7 cut(s)	542, 555, 951, 1053, 1488, 1875, 2141
GlaI	GCGC	2 cut(s)	77, 267
GsaI	CCCAGC	1 cut(s)	244
HaeII	RGCGCY	1 cut(s)	79
HaeIII	GGCC	6 cut(s)	239, 583, 1200, 1208, 1596, 2041
HapII	CCGG	3 cut(s)	33, 143, 220
HhaI	GCGC	2 cut(s)	78, 268
Hin6I	GCGC	2 cut(s)	76, 266
HinP1I	GCGC	2 cut(s)	76, 266
HincII	GTYRAC	2 cut(s)	994, 1561
HindII	GTYRAC	2 cut(s)	994, 1561
HinfI	GANTC	7 cut(s)	56, 103, 549, 1007, 1294, 1916, 2177
HpaII	CCGG	3 cut(s)	33, 143, 220
HphI	GGTGA	8 cut(s)	131, 427, 1131, 1175, 1506, 2014, 2022, 2194
Hpy166II	GTNNAC	7 cut(s)	994, 1251, 1400, 1561, 1605, 1939, 2092
Hpy188I	TCNGA	8 cut(s)	55, 108, 277, 293, 314, 754, 1035, 1440
Hpy8I	GTNNAC	7 cut(s)	994, 1251, 1400, 1561, 1605, 1939, 2092
HpyAV	CCTTC	9 cut(s)	60, 110, 229, 684, 1181, 1290, 1493, 1514, 2001
HpyCH4III	ACNGT	5 cut(s)	1397, 1735, 2125, 2191, 2215
HpyCH4IV	ACGT	2 cut(s)	1341, 2088
HpyF3I	CTNAG	6 cut(s)	52, 591, 809, 935, 1691, 1770
HpySE526I	ACGT	2 cut(s)	1341, 2088
HspAI	GCGC	2 cut(s)	76, 266
LmnI	GCTCC	7 cut(s)	17, 35, 193, 600, 1024, 1412, 1719
Lsp1109I	GCAGC	9 cut(s)	24, 550, 550, 772, 1120, 1709, 1995, 2160, 2230
LweI	GCATC	5 cut(s)	37, 956, 1277, 1843, 2075
MaeI	CTAG	7 cut(s)	542, 555, 951, 1053, 1488, 1875, 2141
MaeII	ACGT	2 cut(s)	1341, 2088
MaeIII	GTNAC	6 cut(s)	86, 427, 1091, 1181, 1324, 1642
MbiI	CCGCTC	1 cut(s)	1980
MfeI	CAATTG	2 cut(s)	1038, 1059
MflI	RGATCY	5 cut(s)	288, 1384, 1492, 1663, 1987
MhlI	GDGCHC	1 cut(s)	1661
MlsI	TGGCCA	1 cut(s)	1596
MluNI	TGGCCA	1 cut(s)	1596
MlyI	GAGTC	5 cut(s)	50, 558, 1001, 1910, 2186
MmeI	TCCRAC	2 cut(s)	1058, 1612
Mox20I	TGGCCA	1 cut(s)	1596
MscI	TGGCCA	1 cut(s)	1596
MseI	TTAA	8 cut(s)	324, 363, 443, 873, 1892, 1965, 2193, 2237
MslI	CAYNNNNRTG	4 cut(s)	144, 1001, 1973, 2213
Msp20I	TGGCCA	1 cut(s)	1596
MspA1I	CMGCKG	3 cut(s)	15, 1098, 1111
MspI	CCGG	3 cut(s)	33, 143, 220
MspR9I	CCNGG	4 cut(s)	143, 904, 1668, 1839
MunI	CAATTG	2 cut(s)	1038, 1059
MvaI	CCWGG	3 cut(s)	904, 1668, 1839
NciI	CCSGG	1 cut(s)	143
NlaIV	GGNNCC	7 cut(s)	31, 189, 1665, 1715, 1989, 2209, 2251
NmeAIII	GCCGAG	1 cut(s)	2138
NmuCI	GTSAC	4 cut(s)	86, 1091, 1181, 1642
NspI	RCATGY	3 cut(s)	1306, 1464, 1891
OliI	CACNNNNGTG	1 cut(s)	2213
PaeI	GCATGC	1 cut(s)	1464
PaeR7I	CTCGAG	1 cut(s)	1155
PagI	TCATGA	2 cut(s)	771, 972
PaqCI	CACCTGC	1 cut(s)	1120
PasI	CCCWGGG	1 cut(s)	903
PciI	ACATGT	1 cut(s)	1887
PfeI	GAWTC	2 cut(s)	103, 1294
PflMI	CCANNNNNTGG	2 cut(s)	742, 1555
PleI	GAGTC	5 cut(s)	50, 557, 1001, 1910, 2185
PpsI	GAGTC	5 cut(s)	50, 557, 1001, 1910, 2185
PscI	ACATGT	1 cut(s)	1887
PshAI	GACNNNNGTC	1 cut(s)	1040
PshBI	ATTAAT	1 cut(s)	363
Psp6I	CCWGG	3 cut(s)	902, 1666, 1837
PspFI	CCCAGC	1 cut(s)	240
PspGI	CCWGG	3 cut(s)	902, 1666, 1837
PspN4I	GGNNCC	7 cut(s)	31, 189, 1665, 1715, 1989, 2209, 2251
PspPI	GGNCC	6 cut(s)	238, 582, 671, 1206, 1605, 2039
PstI	CTGCAG	1 cut(s)	1110
PsuI	RGATCY	5 cut(s)	288, 1384, 1492, 1663, 1987
PvuII	CAGCTG	1 cut(s)	1111
RsaI	GTAC	6 cut(s)	572, 706, 734, 1118, 1149, 1940
RsaNI	GTAC	6 cut(s)	571, 705, 733, 1117, 1148, 1939
RseI	CAYNNNNRTG	4 cut(s)	144, 1001, 1973, 2213
SalI	GTCGAC	1 cut(s)	992
SaqAI	TTAA	8 cut(s)	324, 363, 443, 873, 1892, 1965, 2193, 2237
Sau96I	GGNCC	6 cut(s)	238, 582, 671, 1206, 1605, 2039
ScaI	AGTACT	1 cut(s)	706
SchI	GAGTC	5 cut(s)	50, 558, 1001, 1910, 2186
ScrFI	CCNGG	4 cut(s)	143, 904, 1668, 1839
SduI	GDGCHC	1 cut(s)	1661
SfaNI	GCATC	5 cut(s)	37, 956, 1277, 1843, 2075
SfcI	CTRYAG	1 cut(s)	1106
Sfr274I	CTCGAG	1 cut(s)	1155
SinI	GGWCC	2 cut(s)	671, 1605
SlaI	CTCGAG	1 cut(s)	1155
SmiMI	CAYNNNNRTG	4 cut(s)	144, 1001, 1973, 2213
SmlI	CTYRAG	1 cut(s)	1155
SmoI	CTYRAG	1 cut(s)	1155
SphI	GCATGC	1 cut(s)	1464
SsiI	CCGC	8 cut(s)	15, 24, 348, 1098, 1727, 1980, 2042, 2232
SspMI	CTAG	7 cut(s)	542, 555, 951, 1053, 1488, 1875, 2141
StyD4I	CCNGG	4 cut(s)	141, 902, 1666, 1837
StyI	CCWWGG	2 cut(s)	1320, 2050
TaaI	ACNGT	5 cut(s)	1397, 1735, 2125, 2191, 2215
TaiI	ACGT	2 cut(s)	1344, 2091
TaqII	GACCGA	1 cut(s)	1254
TatI	WGTACW	4 cut(s)	570, 704, 1116, 1938
TauI	GCSGC	3 cut(s)	1101, 1983, 2044
TfiI	GAWTC	2 cut(s)	103, 1294
Tru1I	TTAA	8 cut(s)	324, 363, 443, 873, 1892, 1965, 2193, 2237
Tru9I	TTAA	8 cut(s)	324, 363, 443, 873, 1892, 1965, 2193, 2237
TscAI	CASTG	8 cut(s)	97, 859, 1402, 1778, 1806, 2121, 2130, 2218
TseFI	GTSAC	4 cut(s)	86, 1091, 1181, 1642
TseI	GCWGC	9 cut(s)	12, 538, 563, 785, 1108, 1697, 2008, 2148, 2218
Tsp45I	GTSAC	4 cut(s)	86, 1091, 1181, 1642
TspGWI	ACGGA	1 cut(s)	1676
TspRI	CASTG	8 cut(s)	97, 859, 1402, 1778, 1806, 2121, 2130, 2218
Van91I	CCANNNNNTGG	2 cut(s)	742, 1555
VpaK11BI	GGWCC	2 cut(s)	671, 1605
VspI	ATTAAT	1 cut(s)	363
XapI	RAATTY	3 cut(s)	498, 1016, 2136
XbaI	TCTAGA	1 cut(s)	950
XceI	RCATGY	3 cut(s)	1306, 1464, 1891
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1823, 2102
XhoI	CTCGAG	1 cut(s)	1155
XmiI	GTMKAC	1 cut(s)	993
XspI	CTAG	7 cut(s)	542, 555, 951, 1053, 1488, 1875, 2141
ZrmI	AGTACT	1 cut(s)	706

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.