Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7A

Orthogroup ID

OG0009078

Physical Location & Seq

Genomic Coordinates Reverse (-)

433061 .. 437562

Gene Structure 4502 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7AG006300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1572 bp

ATGTGCATTCTTGAATGTTGTATTGAACACGTACGGCAGGCCCAGCATGAAAGAGCTGATAACTCTGCGCTTCGATCAGAGAATGACAAGATCCGATGTGAGAACATTGCCATCCGAGAGGCACTTAAAAATGTGATTTGCCCATCTTGCGGTGTCCCCCCCATTAATGAAGATAACTATTTCGATGAACACAAATTGCGAATGGAGAACGCCCAACTGAAAGAAGAGCTAGATAGAGTCTCTAGTATTGCTGCCAAATACATCGGGAGGCCCATTTCTCAGCTCCCACCAGTTCAGCCTATTCATATATCTCCTTTGGATTTATCAATGGCGAGTTTTGGGGGGCATGCAATGGGTGGTCCTTCTCTTGATCTTGATCTTCTTACAGGGAGTACTTCATCTACCATACCCAGTTTGCCGTACCAGCCTATGGGCATTTCAGACATGGACAAGTCCCTCATGACAGATATCGCTGCAAATGCAATGGAAGAGTTGCTTAGGCTTTTGCAGACCAATGATCCTCTGTGGATGAAGTCATCCACTGATGGCAGGGATGTTCTTAATCTTGAAAGCTATGAGAGGATTTTCCCCAGGGCTACTACTCATTTGAAAAATCCCAATCTTAGAATTGAAGCATCTAGAGCTTCTGGTGTGGTAATCATGAATGGCTTAGCATTAGTCGACATGATTATGGACTCGAACAAATTTGGGGAGCTATTTCCGACAATTGTCTCAATGGCTAGAACAATTGAAGTGATATCGTCTGGAATGTTAGGTAGTCACAGCGGCTCTCTGCAGCTGATGTACAAAGAGTTGCAGGTGCTTTCACCATTAGTACCAACTCGAGAGTTCTACTTCCTTCGTTATTGTCACCAAATTGAGCAAGGCCATTGGGCCATTGTTGATGTTTCTTATGATTTTCCACGAGATAATCAATTTACAAATCAATGTCGATCTCATAGGCTTCCTTCTGGATGCTTGATTCAAGACATGCCTAATGGATATTCCAAGGTTACTTGGGTGGAACACGTTGAAATAGAAGAGAAAGCCCCAATTCATCGACTTTATAGAGATCTTATTCACAGTGGACAAGCATTTGGAGCTGAAAGATGGCTCGTTGTTCTTCAGAGAATGTGTGAAAGATTTGCATGCCTAATGGTGTCAGGCACTTCTACTAGAGATCTTGAAGGAGTGATCCCATCACCTGAAGGCAAGAGAAGCATGATGAAACTTGCCCAAAGGATGGTCAACAACTTCTGTGCAAGCATTAGCACATCTAATGGCCATCGGTGGACCACAATTTCTGGTATGAACGAAGTTGGAGTGCGAGTGACCATCCATAAGAGCACGGATCCTGGTAAGCCCAATGGTGTGGTTCTTAGTGCAGCTACTACCATTTGGCTCCCACTATCTCCACAAACTGTCTTCAATTTCTTCAAGGATGAAAGAACTCGACCTCAGTGGGATGTCCTTTCCAATGGCAATGCAGTGCAAGAGGTCGCCCATATAGCAAATGGTTCACATCCAGGGAACTGCATATCTGTTCTTCGAGTAAGATCATATATGAACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000902 GO:0000904 GO:0000976 GO:0001067 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007275 GO:0008150 GO:0009653 GO:0009664 GO:0009791 GO:0009827 GO:0009828 GO:0009888 GO:0009889 GO:0009908 GO:0009987 GO:0010026 GO:0010090 GO:0010091 GO:0010468 GO:0010556 GO:0016043 GO:0019219 GO:0019222 GO:0022414 GO:0030154 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0032989 GO:0042545 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044212 GO:0044424 GO:0044464 GO:0045229 GO:0045595 GO:0045596 GO:0048367 GO:0048437 GO:0048468 GO:0048497 GO:0048519 GO:0048523 GO:0048608 GO:0048731 GO:0048856 GO:0048869 GO:0050789 GO:0050793 GO:0050794 GO:0051093 GO:0051171 GO:0051252 GO:0060255 GO:0061458 GO:0065007 GO:0071554 GO:0071555 GO:0071669 GO:0071840 GO:0080090 GO:0090558 GO:0090567 GO:0090626 GO:0090700 GO:0097159 GO:0099402 GO:0140110 GO:1901363 GO:1903506 GO:1990837 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Homeobox START

Protein Analysis

523

Amino Acids

58.54

Weight (kDa)

6.29

Isoelectric Point (pI)

47.94

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
START	PF01852	157 - 381	1.9e-45	START domain
PDF2_C	PF25797	401 - 518	9.6e-52	PDF2-like, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0009078)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G17920 AT1G17920 AT1G73360
fragaria_vesca	FvH4_5g18090 FvH4_5g18090
malus_domestica	MD06G1236400.v1.1 MD14G1243300.v1.1
prunus_persica	Prupe.5G240900_v2.0.a1
pyrus_communis	pycom06g21200 pycom06g21210 pycom14g20460 pycom15g33770
rosa_chinensis	RchiOBHm_Chr7g0177521
rosa_laevigata	RLG00000005530
rosa_multiflora	Rmu_ssc0000330.1_g000002
rosa_roxburghii	Rroxscaffold_3G00275800
rosa_rugosa	Rorug06G0407000
rosa_samantha	Rh7AG006300 Rh7BG006200 Rh7CG006700 Rh7DG006300
rosa_wichuraiana	Rw7G000520

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	808
Acc36I	ACCTGC	1 cut(s)	808
AccB7I	CCANNNNNTGG	2 cut(s)	430, 1243
AccI	GTMKAC	1 cut(s)	681
AciI	CCGC	2 cut(s)	150, 786
AclWI	GGATC	5 cut(s)	85, 512, 1189, 1346, 1359
AcoI	YGGCCR	1 cut(s)	1282
AcsI	RAATTY	1 cut(s)	704
AcuI	CTGAAG	2 cut(s)	1109, 1227
AfaI	GTAC	5 cut(s)	33, 394, 422, 806, 837
AfiI	CCNNNNNNNGG	3 cut(s)	149, 430, 1243
AflIII	ACRYGT	2 cut(s)	28, 1027
AjnI	CCWGG	3 cut(s)	590, 1354, 1525
AluBI	AGCT	9 cut(s)	56, 229, 283, 573, 644, 715, 799, 1103, 1388
AluI	AGCT	9 cut(s)	56, 229, 283, 573, 644, 715, 799, 1103, 1388
Alw21I	GWGCWC	1 cut(s)	1349
Alw26I	GTCTC	2 cut(s)	244, 736
AlwI	GGATC	5 cut(s)	85, 512, 1189, 1346, 1359
Ama87I	CYCGRG	1 cut(s)	843
AoxI	GGCC	5 cut(s)	39, 269, 886, 894, 1282
ApeKI	GCWGC	4 cut(s)	251, 473, 796, 1385
ApoI	RAATTY	1 cut(s)	704
AseI	ATTAAT	1 cut(s)	165
AspLEI	GCGC	1 cut(s)	70
AspS9I	GGNCC	5 cut(s)	40, 270, 359, 894, 1293
AsuHPI	GGTGA	3 cut(s)	819, 863, 1194
AvaI	CYCGRG	1 cut(s)	843
AvaII	GGWCC	2 cut(s)	359, 1293
BalI	TGGCCA	1 cut(s)	1284
BamHI	GGATCC	1 cut(s)	1351
BauI	CACGAG	1 cut(s)	924
BbsI	GAAGAC	1 cut(s)	1417
Bbv12I	GWGCWC	1 cut(s)	1349
BbvI	GCAGC	4 cut(s)	238, 460, 808, 1397
BccI	CCATC	8 cut(s)	119, 151, 539, 1104, 1207, 1237, 1293, 1343
BceAI	ACGGC	2 cut(s)	50, 403
BciT130I	CCWGG	3 cut(s)	592, 1356, 1527
BcoDI	GTCTC	2 cut(s)	244, 736
BfaI	CTAG	5 cut(s)	230, 243, 639, 741, 1176
BfmI	CTRYAG	1 cut(s)	794
BfuAI	ACCTGC	1 cut(s)	808
BglII	AGATCT	2 cut(s)	1072, 1180
BisI	GCNGC	5 cut(s)	252, 474, 787, 797, 1386
BlpI	GCTNAGC	1 cut(s)	670
BlsI	GCNGC	5 cut(s)	253, 475, 788, 798, 1387
BmcAI	AGTACT	1 cut(s)	394
Bme1390I	CCNGG	3 cut(s)	592, 1356, 1527
Bme18I	GGWCC	2 cut(s)	359, 1293
BmeT110I	CYCGRG	1 cut(s)	843
BmgT120I	GGNCC	5 cut(s)	40, 270, 359, 894, 1293
BmiI	GGNNCC	2 cut(s)	1353, 1403
BmrFI	CCNGG	3 cut(s)	592, 1356, 1527
BmrI	ACTGGG	1 cut(s)	405
BmsI	GCATC	2 cut(s)	644, 965
BmuI	ACTGGG	1 cut(s)	405
BoxI	GACNNNNGTC	1 cut(s)	728
BpiI	GAAGAC	1 cut(s)	1417
Bpu10I	CCTNAGC	1 cut(s)	497
Bpu1102I	GCTNAGC	1 cut(s)	670
BsaAI	YACGTR	1 cut(s)	31
BsaBI	GATNNNNATC	1 cut(s)	375
BsaJI	CCNNGG	4 cut(s)	590, 591, 1008, 1526
BsaXI	ACNNNNNCTCC	2 cut(s)	1314, 1344
Bsc4I	CCNNNNNNNGG	3 cut(s)	149, 430, 1243
Bse1I	ACTGG	2 cut(s)	290, 411
Bse3DI	GCAATG	4 cut(s)	105, 357, 489, 1489
Bse8I	GATNNNNATC	1 cut(s)	375
BseBI	CCWGG	3 cut(s)	592, 1356, 1527
BseDI	CCNNGG	4 cut(s)	590, 591, 1008, 1526
BseJI	GATNNNNATC	1 cut(s)	375
BseLI	CCNNNNNNNGG	3 cut(s)	149, 430, 1243
BseMI	GCAATG	4 cut(s)	105, 357, 489, 1489
BseMII	CTCAG	2 cut(s)	293, 1472
BseNI	ACTGG	2 cut(s)	290, 411
BseXI	GCAGC	4 cut(s)	238, 460, 808, 1397
BseYI	CCCAGC	1 cut(s)	42
BsgI	GTGCAG	1 cut(s)	1404
BshFI	GGCC	5 cut(s)	41, 271, 888, 896, 1284
BsiHKAI	GWGCWC	1 cut(s)	1349
BsiHKCI	CYCGRG	1 cut(s)	843
BsiWI	CGTACG	1 cut(s)	31
BslFI	GGGAC	2 cut(s)	140, 439
BslI	CCNNNNNNNGG	3 cut(s)	149, 430, 1243
BsmAI	GTCTC	2 cut(s)	244, 736
BsmFI	GGGAC	2 cut(s)	140, 439
BsmI	GAATGC	1 cut(s)	6
BsnI	GGCC	5 cut(s)	41, 271, 888, 896, 1284
BsoBI	CYCGRG	1 cut(s)	843
Bsp1286I	GDGCHC	1 cut(s)	1349
Bsp1407I	TGTACA	1 cut(s)	804
Bsp1720I	GCTNAGC	1 cut(s)	670
BspACI	CCGC	2 cut(s)	150, 786
BspANI	GGCC	5 cut(s)	41, 271, 888, 896, 1284
BspCNI	CTCAG	2 cut(s)	292, 1471
BspHI	TCATGA	2 cut(s)	459, 660
BspLI	GGNNCC	2 cut(s)	1353, 1403
BspMAI	CTGCAG	1 cut(s)	798
BspMI	ACCTGC	1 cut(s)	808
BspPI	GGATC	5 cut(s)	85, 512, 1189, 1346, 1359
BspQI	GCTCTTC	1 cut(s)	219
BsrDI	GCAATG	4 cut(s)	105, 357, 489, 1489
BsrGI	TGTACA	1 cut(s)	804
BsrI	ACTGG	2 cut(s)	290, 411
BssECI	CCNNGG	4 cut(s)	590, 591, 1008, 1526
BssSI	CACGAG	1 cut(s)	924
BssT1I	CCWWGG	1 cut(s)	1008
Bst2BI	CACGAG	1 cut(s)	924
Bst2UI	CCWGG	3 cut(s)	592, 1356, 1527
Bst4CI	ACNGT	2 cut(s)	1085, 1423
Bst6I	CTCTTC	3 cut(s)	219, 483, 1035
BstAUI	TGTACA	1 cut(s)	804
BstBAI	YACGTR	1 cut(s)	31
BstC8I	GCNNGC	4 cut(s)	39, 348, 1150, 1264
BstDEI	CTNAG	6 cut(s)	279, 497, 623, 670, 1379, 1458
BstHHI	GCGC	1 cut(s)	70
BstMAI	GTCTC	2 cut(s)	244, 736
BstMWI	GCNNNNNNNGC	8 cut(s)	43, 147, 424, 479, 641, 1100, 1218, 1508
BstNI	CCWGG	3 cut(s)	592, 1356, 1527
BstNSI	RCATGY	3 cut(s)	350, 994, 1152
BstPAI	GACNNNNGTC	1 cut(s)	728
BstSCI	CCNGG	3 cut(s)	590, 1354, 1525
BstSFI	CTRYAG	1 cut(s)	794
BstV1I	GCAGC	4 cut(s)	238, 460, 808, 1397
BstV2I	GAAGAC	1 cut(s)	1417
BstX2I	RGATCY	4 cut(s)	90, 1072, 1180, 1351
BstXI	CCANNNNNNTGG	1 cut(s)	1372
BstYI	RGATCY	4 cut(s)	90, 1072, 1180, 1351
BsuRI	GGCC	5 cut(s)	41, 271, 888, 896, 1284
BtsI	GCAGTG	1 cut(s)	1494
BtsIMutI	CAGTG	4 cut(s)	540, 1090, 1466, 1494
BveI	ACCTGC	1 cut(s)	808
Cac8I	GCNNGC	4 cut(s)	39, 348, 1150, 1264
CciI	TCATGA	2 cut(s)	459, 660
CfoI	GCGC	1 cut(s)	70
Cfr13I	GGNCC	5 cut(s)	40, 270, 359, 894, 1293
Csp6I	GTAC	5 cut(s)	32, 393, 421, 805, 836
CviAII	CATG	9 cut(s)	47, 347, 445, 460, 661, 685, 991, 1149, 1222
CviQI	GTAC	5 cut(s)	32, 393, 421, 805, 836
DdeI	CTNAG	6 cut(s)	279, 497, 623, 670, 1379, 1458
EaeI	YGGCCR	1 cut(s)	1282
Eam1104I	CTCTTC	3 cut(s)	219, 483, 1035
EarI	CTCTTC	3 cut(s)	219, 483, 1035
Eco130I	CCWWGG	1 cut(s)	1008
Eco32I	GATATC	2 cut(s)	469, 759
Eco47I	GGWCC	2 cut(s)	359, 1293
Eco57I	CTGAAG	2 cut(s)	1109, 1227
Eco88I	CYCGRG	1 cut(s)	843
EcoRII	CCWGG	3 cut(s)	590, 1354, 1525
EcoRV	GATATC	2 cut(s)	469, 759
EcoT14I	CCWWGG	1 cut(s)	1008
ErhI	CCWWGG	1 cut(s)	1008
FaeI	CATG	9 cut(s)	50, 350, 448, 463, 664, 688, 994, 1152, 1225
FalI	AAGNNNNNCTT	2 cut(s)	480, 512
FaqI	GGGAC	2 cut(s)	140, 439
FatI	CATG	9 cut(s)	46, 346, 444, 459, 660, 684, 990, 1148, 1221
FblI	GTMKAC	1 cut(s)	681
Fnu4HI	GCNGC	5 cut(s)	252, 474, 787, 797, 1386
Fsp4HI	GCNGC	5 cut(s)	252, 474, 787, 797, 1386
FspBI	CTAG	5 cut(s)	230, 243, 639, 741, 1176
GlaI	GCGC	1 cut(s)	69
GluI	GCNGC	5 cut(s)	252, 474, 787, 797, 1386
GsaI	CCCAGC	1 cut(s)	46
HaeIII	GGCC	5 cut(s)	41, 271, 888, 896, 1284
HhaI	GCGC	1 cut(s)	70
Hin1II	CATG	9 cut(s)	50, 350, 448, 463, 664, 688, 994, 1152, 1225
Hin6I	GCGC	1 cut(s)	68
HinP1I	GCGC	1 cut(s)	68
HincII	GTYRAC	2 cut(s)	682, 1249
HindII	GTYRAC	2 cut(s)	682, 1249
HinfI	GANTC	3 cut(s)	237, 695, 982
HphI	GGTGA	3 cut(s)	819, 863, 1194
Hpy166II	GTNNAC	5 cut(s)	682, 1088, 1249, 1293, 1520
Hpy188I	TCNGA	6 cut(s)	79, 95, 116, 442, 723, 1128
Hpy8I	GTNNAC	5 cut(s)	682, 1088, 1249, 1293, 1520
HpyAV	CCTTC	5 cut(s)	372, 869, 978, 1181, 1202
HpyCH4III	ACNGT	2 cut(s)	1085, 1423
HpyCH4IV	ACGT	2 cut(s)	30, 1029
HpyF10VI	GCNNNNNNNGC	8 cut(s)	43, 147, 424, 479, 641, 1100, 1218, 1508
HpyF3I	CTNAG	6 cut(s)	279, 497, 623, 670, 1379, 1458
HpySE526I	ACGT	2 cut(s)	30, 1029
Hsp92II	CATG	9 cut(s)	50, 350, 448, 463, 664, 688, 994, 1152, 1225
HspAI	GCGC	1 cut(s)	68
LguI	GCTCTTC	1 cut(s)	219
LmnI	GCTCC	4 cut(s)	288, 712, 1100, 1407
Lsp1109I	GCAGC	4 cut(s)	238, 460, 808, 1397
LweI	GCATC	2 cut(s)	644, 965
MaeI	CTAG	5 cut(s)	230, 243, 639, 741, 1176
MaeII	ACGT	2 cut(s)	30, 1029
MaeIII	GTNAC	4 cut(s)	779, 869, 1012, 1330
MboII	GAAGA	9 cut(s)	182, 236, 371, 500, 1052, 1115, 1417, 1426, 1538
MfeI	CAATTG	2 cut(s)	726, 747
MflI	RGATCY	4 cut(s)	90, 1072, 1180, 1351
MhlI	GDGCHC	1 cut(s)	1349
MlsI	TGGCCA	1 cut(s)	1284
MluNI	TGGCCA	1 cut(s)	1284
MlyI	GAGTC	2 cut(s)	246, 689
MmeI	TCCRAC	2 cut(s)	746, 1300
MnlI	CCTC	7 cut(s)	112, 261, 467, 531, 573, 1467, 1489
Mox20I	TGGCCA	1 cut(s)	1284
MscI	TGGCCA	1 cut(s)	1284
MseI	TTAA	3 cut(s)	126, 165, 561
MslI	CAYNNNNRTG	1 cut(s)	689
Msp20I	TGGCCA	1 cut(s)	1284
MspA1I	CMGCKG	2 cut(s)	786, 799
MspR9I	CCNGG	3 cut(s)	592, 1356, 1527
MunI	CAATTG	2 cut(s)	726, 747
Mva1269I	GAATGC	1 cut(s)	6
MvaI	CCWGG	3 cut(s)	592, 1356, 1527
MwoI	GCNNNNNNNGC	8 cut(s)	43, 147, 424, 479, 641, 1100, 1218, 1508
NlaIII	CATG	9 cut(s)	50, 350, 448, 463, 664, 688, 994, 1152, 1225
NlaIV	GGNNCC	2 cut(s)	1353, 1403
NmuCI	GTSAC	3 cut(s)	779, 869, 1330
NspI	RCATGY	3 cut(s)	350, 994, 1152
PaeI	GCATGC	2 cut(s)	350, 1152
PaeR7I	CTCGAG	1 cut(s)	843
PagI	TCATGA	2 cut(s)	459, 660
PaqCI	CACCTGC	1 cut(s)	808
PasI	CCCWGGG	1 cut(s)	591
PciSI	GCTCTTC	1 cut(s)	219
PctI	GAATGC	1 cut(s)	6
PfeI	GAWTC	1 cut(s)	982
Pfl23II	CGTACG	1 cut(s)	31
PflMI	CCANNNNNTGG	2 cut(s)	430, 1243
PkrI	GCNGC	5 cut(s)	253, 475, 788, 798, 1387
PleI	GAGTC	2 cut(s)	245, 689
PpsI	GAGTC	2 cut(s)	245, 689
Ppu21I	YACGTR	1 cut(s)	31
PshAI	GACNNNNGTC	1 cut(s)	728
PshBI	ATTAAT	1 cut(s)	165
Psp6I	CCWGG	3 cut(s)	590, 1354, 1525
PspFI	CCCAGC	1 cut(s)	42
PspGI	CCWGG	3 cut(s)	590, 1354, 1525
PspLI	CGTACG	1 cut(s)	31
PspN4I	GGNNCC	2 cut(s)	1353, 1403
PspPI	GGNCC	5 cut(s)	40, 270, 359, 894, 1293
PstI	CTGCAG	1 cut(s)	798
PsuI	RGATCY	4 cut(s)	90, 1072, 1180, 1351
PvuII	CAGCTG	1 cut(s)	799
RsaI	GTAC	5 cut(s)	33, 394, 422, 806, 837
RsaNI	GTAC	5 cut(s)	32, 393, 421, 805, 836
RseI	CAYNNNNRTG	1 cut(s)	689
SalI	GTCGAC	1 cut(s)	680
SapI	GCTCTTC	1 cut(s)	219
SaqAI	TTAA	3 cut(s)	126, 165, 561
SatI	GCNGC	5 cut(s)	252, 474, 787, 797, 1386
Sau96I	GGNCC	5 cut(s)	40, 270, 359, 894, 1293
ScaI	AGTACT	1 cut(s)	394
SchI	GAGTC	2 cut(s)	246, 689
ScrFI	CCNGG	3 cut(s)	592, 1356, 1527
SduI	GDGCHC	1 cut(s)	1349
SfaNI	GCATC	2 cut(s)	644, 965
SfcI	CTRYAG	1 cut(s)	794
Sfr274I	CTCGAG	1 cut(s)	843
SinI	GGWCC	2 cut(s)	359, 1293
SlaI	CTCGAG	1 cut(s)	843
SmiMI	CAYNNNNRTG	1 cut(s)	689
SmlI	CTYRAG	1 cut(s)	843
SmoI	CTYRAG	1 cut(s)	843
SphI	GCATGC	2 cut(s)	350, 1152
SsiI	CCGC	2 cut(s)	150, 786
SspMI	CTAG	5 cut(s)	230, 243, 639, 741, 1176
StyD4I	CCNGG	3 cut(s)	590, 1354, 1525
StyI	CCWWGG	1 cut(s)	1008
TaaI	ACNGT	2 cut(s)	1085, 1423
TaiI	ACGT	2 cut(s)	33, 1032
TaqI	TCGA	9 cut(s)	73, 183, 681, 698, 844, 952, 1060, 1453, 1549
TatI	WGTACW	2 cut(s)	392, 804
TauI	GCSGC	1 cut(s)	789
TfiI	GAWTC	1 cut(s)	982
Tru1I	TTAA	3 cut(s)	126, 165, 561
Tru9I	TTAA	3 cut(s)	126, 165, 561
TscAI	CASTG	4 cut(s)	547, 1090, 1466, 1494
TseFI	GTSAC	3 cut(s)	779, 869, 1330
TseI	GCWGC	4 cut(s)	251, 473, 796, 1385
Tsp45I	GTSAC	3 cut(s)	779, 869, 1330
TspGWI	ACGGA	1 cut(s)	1364
TspRI	CASTG	4 cut(s)	547, 1090, 1466, 1494
Van91I	CCANNNNNTGG	2 cut(s)	430, 1243
VpaK11BI	GGWCC	2 cut(s)	359, 1293
VspI	ATTAAT	1 cut(s)	165
XapI	RAATTY	1 cut(s)	704
XbaI	TCTAGA	1 cut(s)	638
XceI	RCATGY	3 cut(s)	350, 994, 1152
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1511
XhoI	CTCGAG	1 cut(s)	843
XmiI	GTMKAC	1 cut(s)	681
XspI	CTAG	5 cut(s)	230, 243, 639, 741, 1176
ZrmI	AGTACT	1 cut(s)	394

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.