Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr06

Orthogroup ID

OG0009078

Physical Location & Seq

Genomic Coordinates Forward (+)

36780228 .. 36784227

Gene Structure 4000 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD06G1236400.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2133 bp

ATGGAGTACGGCAGCGGAGGCGGTGGCTCTGGTAGCGGAGACCACCACGACGAGGCCTCCGGCTCTCAGAGAAGGAAGAAGCGCTACCACCGCCACACTACTCACCAGATTCAGAGACTTGAAGGAATGTATAAGGAGTGCCCTCACCCAGATGAAAAGCAGAGGATGCAGTTGAGCAGAGAGTTGGGTTTGGCTCCTCGCCAGATCAAATTTTGGTTTCAAAACCGCAGGACCCAGATGAAGGCGCAAAACGAAAGAGCGGATAACTGCGCGCTTCGAGGAGAGAACGACAAGATCCGATGCGAAAACATTGCAATCAGAGAGGCCCTCAAGAATGTGATTTGCCCCTCTTGCGGTGTCCCTCCACTCAACGAAGATTCCTACTTTGACGAACATAAATTGCGAATGGAGAATGCCCAATTGAAAGAAGAGTTAGATAGAGTGTCTAGTATTGCTGCAAAATACATTGGGAGGCCAATTTCCCAGCTCCCACCAGTTCAGCCTATTCATATTTCGTCTTTGGACTTATCAATAGCAAGTTTTGGGGGCCATGGGATGGCCGGACCTTCGCTTGATCTTGATCTTCTACCTGGGAGTGCTGCATCTTCCATGCCCAATTTACCTTACCAGCCTAATGGGTTTTCGGACATGGATAAGTCCCTCATGACTGACATTGCTGCAAATGCCATGGAAGAGTTGCTTGGGCTTTTGCGGACCAATGAACCCTTGTGGATGAAGTCTTCTACTGATGGGAGGGATGTTCTTAATCTCGAAACCTACGAGAGGATTTTTCCGAGGGCTAATAGTCATTTGAAAACCCCCAATGTTAGAATTGAAGCATCAAGAGATTCTGGTGTGGTTATCATGAACGGTTTAGCATTAGTAGACATGTTTATGGACCCGAACAAATTTGGAGAGCTATTTCCAACAATTGTCTCAATGGCAAGAACAATCGAAGTAATATCATCTGGAATGTTGGGAAGTCATAGTGGCCCTTTGCAGTTGATGTACAACGAGTTGCAAGTGCTTTCGCCATTGGTACCAACTCGGGAGTTCTACTTCCTTCGTTATTGTCAGCAAATCGAGCAAGGCCTGTGGATAATTGTTGATGTTTCTTACGATTTTCCACAAGATAACCAGTTTACAAACCAGTGTCGATCTCGTAGGCTTCCTTCCGGGTGCTTGATTCAAGACATGCCTAATGGATATTCCAAGGTTACGTGGGTGGAACATGTGGAAATAGAAGACAAAGTTCCAACTCATCGGATTTATAGAGATCTTATTCACAGCGGATTAGCATTTGGAGCTGAACGATGGCTTGCTGCTCTGCAGAGAATGTGTGAAAGATTTGCTTGTCTAATGGTTTCAGGAACTTCTACTAGAGATCTTGAAGGAGTGATTCCATCCCCTGAAGGAAAGAGGAGCATGATGAAACTAGCTCAAAGGATGGTGAACAACTTCTGCGCAAGCATTAGCGCATCCAACGGACATAGATGGACCACCCTTTCTGGGACGAACGAGATTGGAGTGCGAGTCACTATCCATAAGATCACTGATCCTGGCCAGCCCAATGGTGTGGTTCTTAGTGCAGCTACTACTATTTGGCTCCCCTTATCACCGCAGAATGTCTTCAATTTTTTCAAGGATGAAAGAACTCGACCTCAGTGGGATGTGCTTTCAAATGGCAATGCAGTGCAAGATGTTGCCCATATAGCAAATGGCTCACATCCAGGGAACTGCATATCTGTTCTTCGAGCATTCAACACTAGCCAGAACAACATGTTGATACTCCAACAGAGCTGCATAGACTCATCAGGCTCACTTGTTGTGTACTCCCCTGTTGACCTACCATCCATAAACATCGCAATGAGCGGCGAGGATCCTTCTTACATTCCTCTGCTGCCCTCAGGGTTCTCCATTTCTCCCGACGGGCAGGCAGATCAAGGGGACTGCGCCTCATCAAGTTCTTGCAATGCAACTGGAAGCGGATCACTAATCACAGTGGCATTTCAAATTCTGGTGAGCAGCTTGCCGTCCACTAAACTGAACTTGGAGTCGGTAAATACCGTTAATACCCTAATCGGAAACACTGTGCAGCAAATTAAGACAGCCTTGAATTGCAATAGTTCCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000902 GO:0000904 GO:0000976 GO:0001067 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007275 GO:0008150 GO:0009653 GO:0009664 GO:0009791 GO:0009827 GO:0009828 GO:0009888 GO:0009889 GO:0009908 GO:0009987 GO:0010026 GO:0010090 GO:0010091 GO:0010468 GO:0010556 GO:0016043 GO:0019219 GO:0019222 GO:0022414 GO:0030154 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0032989 GO:0042545 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044212 GO:0044424 GO:0044464 GO:0045229 GO:0045595 GO:0045596 GO:0048367 GO:0048437 GO:0048468 GO:0048497 GO:0048519 GO:0048523 GO:0048608 GO:0048731 GO:0048856 GO:0048869 GO:0050789 GO:0050793 GO:0050794 GO:0051093 GO:0051171 GO:0051252 GO:0060255 GO:0061458 GO:0065007 GO:0071554 GO:0071555 GO:0071669 GO:0071840 GO:0080090 GO:0090558 GO:0090567 GO:0090626 GO:0090700 GO:0097159 GO:0099402 GO:0140110 GO:1901363 GO:1903506 GO:1990837 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Homeobox START

Protein Analysis

711

Amino Acids

78.43

Weight (kDa)

6.16

Isoelectric Point (pI)

48.96

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Homeodomain	PF00046	26 - 81	1.3e-18	Homeodomain
START	PF01852	225 - 449	1.2e-44	START domain
PDF2_C	PF25797	469 - 707	5.5e-109	PDF2-like, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009078)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G17920 AT1G17920 AT1G73360
fragaria_vesca	FvH4_5g18090 FvH4_5g18090
malus_domestica	MD06G1236400.v1.1 MD14G1243300.v1.1
prunus_persica	Prupe.5G240900_v2.0.a1
pyrus_communis	pycom06g21200 pycom06g21210 pycom14g20460 pycom15g33770
rosa_chinensis	RchiOBHm_Chr7g0177521
rosa_laevigata	RLG00000005530
rosa_multiflora	Rmu_ssc0000330.1_g000002
rosa_roxburghii	Rroxscaffold_3G00275800
rosa_rugosa	Rorug06G0407000
rosa_samantha	Rh7AG006300 Rh7BG006200 Rh7CG006700 Rh7DG006300
rosa_wichuraiana	Rw7G000520

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	1465
Acc65I	GGTACC	1 cut(s)	1039
AccB1I	GGYRCC	1 cut(s)	1039
AccB7I	CCANNNNNTGG	1 cut(s)	556
AccBSI	CCGCTC	2 cut(s)	260, 1872
AccI	GTMKAC	1 cut(s)	885
AccII	CGCG	1 cut(s)	272
AclWI	GGATC	5 cut(s)	289, 1550, 1874, 1887, 1996
AcoI	YGGCCR	2 cut(s)	558, 1561
AcsI	RAATTY	3 cut(s)	209, 908, 2013
AcuI	CTGAAG	1 cut(s)	1431
AfaI	GTAC	4 cut(s)	8, 1010, 1041, 1832
AfeI	AGCGCT	1 cut(s)	83
AfiI	CCNNNNNNNGG	6 cut(s)	52, 241, 353, 556, 783, 1509
AflIII	ACRYGT	3 cut(s)	888, 1231, 1779
AjnI	CCWGG	3 cut(s)	589, 1558, 1729
AjuI	GAANNNNNNNTTGG	2 cut(s)	684, 716
AluBI	AGCT	7 cut(s)	487, 919, 1307, 1439, 1592, 1800, 2028
AluI	AGCT	7 cut(s)	487, 919, 1307, 1439, 1592, 1800, 2028
Alw26I	GTCTC	3 cut(s)	33, 109, 940
AlwI	GGATC	5 cut(s)	289, 1550, 1874, 1887, 1996
Ama87I	CYCGRG	1 cut(s)	1047
Aor51HI	AGCGCT	1 cut(s)	83
AoxI	GGCC	8 cut(s)	54, 324, 473, 547, 558, 991, 1090, 1561
ApoI	RAATTY	3 cut(s)	209, 908, 2013
Asp700I	GAANNNNTTC	2 cut(s)	1457, 1628
Asp718I	GGTACC	1 cut(s)	1039
AspLEI	GCGC	7 cut(s)	84, 247, 272, 274, 1466, 1478, 1955
AspS9I	GGNCC	8 cut(s)	231, 325, 547, 563, 714, 898, 992, 1497
AsuC2I	CCSGG	1 cut(s)	1177
AsuHPI	GGTGA	5 cut(s)	95, 137, 1462, 1608, 2032
AvaI	CYCGRG	1 cut(s)	1047
AvaII	GGWCC	5 cut(s)	231, 563, 714, 898, 1497
AxyI	CCTNAGG	1 cut(s)	1906
BaeGI	GKGCMC	1 cut(s)	143
BalI	TGGCCA	1 cut(s)	1563
BamHI	GGATCC	1 cut(s)	1879
BanI	GGYRCC	1 cut(s)	1039
BarI	GAAGNNNNNNTAC	4 cut(s)	68, 100, 1156, 1188
BbsI	GAAGAC	3 cut(s)	732, 1251, 1621
BccI	CCATC	7 cut(s)	550, 743, 1308, 1411, 1441, 1488, 1858
BceAI	ACGGC	2 cut(s)	25, 2017
BcgI	CGANNNNNNTGC	2 cut(s)	293, 327
BciT130I	CCWGG	3 cut(s)	591, 1560, 1731
BcnI	CCSGG	1 cut(s)	1177
BcoDI	GTCTC	3 cut(s)	33, 109, 940
BfaI	CTAG	4 cut(s)	447, 1380, 1436, 1767
BfmI	CTRYAG	1 cut(s)	1328
BfoI	RGCGCY	1 cut(s)	85
BglII	AGATCT	2 cut(s)	1276, 1384
Bme1390I	CCNGG	4 cut(s)	591, 1177, 1560, 1731
Bme18I	GGWCC	5 cut(s)	231, 563, 714, 898, 1497
BmeT110I	CYCGRG	1 cut(s)	1047
BmgT120I	GGNCC	8 cut(s)	231, 325, 547, 563, 714, 898, 992, 1497
BmiI	GGNNCC	7 cut(s)	195, 233, 548, 900, 1041, 1607, 1881
BmrFI	CCNGG	4 cut(s)	591, 1177, 1560, 1731
BmsI	GCATC	5 cut(s)	156, 290, 611, 848, 1487
BpiI	GAAGAC	3 cut(s)	732, 1251, 1621
BplI	GAGNNNNNCTC	2 cut(s)	312, 344
BpuEI	CTTGAG	1 cut(s)	314
BpuMI	CCSGG	1 cut(s)	1177
BsaAI	YACGTR	1 cut(s)	1221
BsaBI	GATNNNNATC	1 cut(s)	579
BsaI	GGTCTC	1 cut(s)	33
BsaJI	CCNNGG	6 cut(s)	550, 590, 687, 794, 1212, 1730
BsaXI	ACNNNNNCTCC	4 cut(s)	41, 71, 1518, 1548
Bsc4I	CCNNNNNNNGG	6 cut(s)	52, 241, 353, 556, 783, 1509
Bse1I	ACTGG	4 cut(s)	494, 1138, 1150, 1984
Bse21I	CCTNAGG	1 cut(s)	1906
Bse3DI	GCAATG	5 cut(s)	309, 672, 1693, 1872, 1978
Bse8I	GATNNNNATC	1 cut(s)	579
BseBI	CCWGG	3 cut(s)	591, 1560, 1731
BseDI	CCNNGG	6 cut(s)	550, 590, 687, 794, 1212, 1730
BseJI	GATNNNNATC	1 cut(s)	579
BseLI	CCNNNNNNNGG	6 cut(s)	52, 241, 353, 556, 783, 1509
BseMI	GCAATG	5 cut(s)	309, 672, 1693, 1872, 1978
BseMII	CTCAG	3 cut(s)	80, 1676, 1920
BseNI	ACTGG	4 cut(s)	494, 1138, 1150, 1984
BsePI	GCGCGC	1 cut(s)	270
BseRI	GAGGAG	3 cut(s)	186, 294, 1435
BseSI	GKGCMC	1 cut(s)	143
BseYI	CCCAGC	1 cut(s)	483
BsgI	GTGCAG	2 cut(s)	1608, 2114
Bsh1236I	CGCG	1 cut(s)	272
BshFI	GGCC	8 cut(s)	56, 326, 475, 549, 560, 993, 1092, 1563
BshNI	GGYRCC	1 cut(s)	1039
BsiHKCI	CYCGRG	1 cut(s)	1047
BsiSI	CCGG	3 cut(s)	60, 561, 1176
BslFI	GGGAC	4 cut(s)	344, 643, 1525, 1961
BslI	CCNNNNNNNGG	6 cut(s)	52, 241, 353, 556, 783, 1509
BsmAI	GTCTC	3 cut(s)	33, 109, 940
BsmFI	GGGAC	4 cut(s)	344, 643, 1525, 1961
BsmI	GAATGC	2 cut(s)	418, 1757
BsnI	GGCC	8 cut(s)	56, 326, 475, 549, 560, 993, 1092, 1563
Bso31I	GGTCTC	1 cut(s)	33
BsoBI	CYCGRG	1 cut(s)	1047
Bsp1286I	GDGCHC	1 cut(s)	143
Bsp1407I	TGTACA	1 cut(s)	1008
Bsp19I	CCATGG	2 cut(s)	550, 687
BspANI	GGCC	8 cut(s)	56, 326, 475, 549, 560, 993, 1092, 1563
BspCNI	CTCAG	3 cut(s)	79, 1675, 1919
BspFNI	CGCG	1 cut(s)	272
BspHI	TCATGA	2 cut(s)	663, 864
BspLI	GGNNCC	7 cut(s)	195, 233, 548, 900, 1041, 1607, 1881
BspMAI	CTGCAG	1 cut(s)	1332
BspPI	GGATC	5 cut(s)	289, 1550, 1874, 1887, 1996
BspT107I	GGYRCC	1 cut(s)	1039
BspTNI	GGTCTC	1 cut(s)	33
BsrBI	CCGCTC	2 cut(s)	260, 1872
BsrDI	GCAATG	5 cut(s)	309, 672, 1693, 1872, 1978
BsrGI	TGTACA	1 cut(s)	1008
BsrI	ACTGG	4 cut(s)	494, 1138, 1150, 1984
BssECI	CCNNGG	6 cut(s)	550, 590, 687, 794, 1212, 1730
BssHII	GCGCGC	1 cut(s)	270
BssT1I	CCWWGG	3 cut(s)	550, 687, 1212
Bst2UI	CCWGG	3 cut(s)	591, 1560, 1731
Bst4CI	ACNGT	4 cut(s)	872, 2002, 2068, 2092
Bst6I	CTCTTC	2 cut(s)	423, 687
BstAPI	GCANNNNNTGC	1 cut(s)	166
BstAUI	TGTACA	1 cut(s)	1008
BstBAI	YACGTR	1 cut(s)	1221
BstC8I	GCNNGC	6 cut(s)	272, 1320, 1468, 1565, 1935, 2030
BstDEI	CTNAG	4 cut(s)	66, 1583, 1662, 1906
BstDSI	CCRYGG	2 cut(s)	550, 687
BstENI	CCTNNNNNAGG	1 cut(s)	781
BstFNI	CGCG	1 cut(s)	272
BstH2I	RGCGCY	1 cut(s)	85
BstHHI	GCGC	7 cut(s)	84, 247, 272, 274, 1466, 1478, 1955
BstMAI	GTCTC	3 cut(s)	33, 109, 940
BstMWI	GCNNNNNNNGC	9 cut(s)	18, 33, 90, 166, 351, 683, 1084, 1304, 1712
BstNI	CCWGG	3 cut(s)	591, 1560, 1731
BstNSI	RCATGY	4 cut(s)	892, 1198, 1235, 1783
BstSCI	CCNGG	4 cut(s)	589, 1175, 1558, 1729
BstSFI	CTRYAG	1 cut(s)	1328
BstSLI	GKGCMC	1 cut(s)	143
BstUI	CGCG	1 cut(s)	272
BstV2I	GAAGAC	3 cut(s)	732, 1251, 1621
BstX2I	RGATCY	4 cut(s)	294, 1276, 1384, 1879
BstXI	CCANNNNNNTGG	3 cut(s)	635, 1571, 1576
BstYI	RGATCY	4 cut(s)	294, 1276, 1384, 1879
Bsu36I	CCTNAGG	1 cut(s)	1906
BsuRI	GGCC	8 cut(s)	56, 326, 475, 549, 560, 993, 1092, 1563
BtgI	CCRYGG	2 cut(s)	550, 687
BtgZI	GCGATG	1 cut(s)	1846
BtsI	GCAGTG	1 cut(s)	1698
BtsIMutI	CAGTG	6 cut(s)	1157, 1551, 1670, 1698, 2007, 2088
Cac8I	GCNNGC	6 cut(s)	272, 1320, 1468, 1565, 1935, 2030
CciI	TCATGA	2 cut(s)	663, 864
CfoI	GCGC	7 cut(s)	84, 247, 272, 274, 1466, 1478, 1955
Cfr13I	GGNCC	8 cut(s)	231, 325, 547, 563, 714, 898, 992, 1497
Csp6I	GTAC	4 cut(s)	7, 1009, 1040, 1831
CspCI	CAANNNNNGTGG	2 cut(s)	1076, 1111
CviQI	GTAC	4 cut(s)	7, 1009, 1040, 1831
DdeI	CTNAG	4 cut(s)	66, 1583, 1662, 1906
EaeI	YGGCCR	2 cut(s)	558, 1561
Eam1104I	CTCTTC	2 cut(s)	423, 687
EarI	CTCTTC	2 cut(s)	423, 687
Eco130I	CCWWGG	3 cut(s)	550, 687, 1212
Eco147I	AGGCCT	2 cut(s)	56, 1092
Eco31I	GGTCTC	1 cut(s)	33
Eco47I	GGWCC	5 cut(s)	231, 563, 714, 898, 1497
Eco47III	AGCGCT	1 cut(s)	83
Eco57I	CTGAAG	1 cut(s)	1431
Eco81I	CCTNAGG	1 cut(s)	1906
Eco88I	CYCGRG	1 cut(s)	1047
EcoNI	CCTNNNNNAGG	1 cut(s)	781
EcoO109I	RGGNCCY	2 cut(s)	231, 325
EcoRII	CCWGG	3 cut(s)	589, 1558, 1729
EcoT14I	CCWWGG	3 cut(s)	550, 687, 1212
ErhI	CCWWGG	3 cut(s)	550, 687, 1212
FalI	AAGNNNNNCTT	6 cut(s)	684, 716, 1336, 1368, 2096, 2128
FaqI	GGGAC	4 cut(s)	344, 643, 1525, 1961
FblI	GTMKAC	1 cut(s)	885
FspBI	CTAG	4 cut(s)	447, 1380, 1436, 1767
FspI	TGCGCA	1 cut(s)	1465
GlaI	GCGC	7 cut(s)	83, 246, 271, 273, 1465, 1477, 1954
GsaI	CCCAGC	1 cut(s)	487
HaeII	RGCGCY	1 cut(s)	85
HaeIII	GGCC	8 cut(s)	56, 326, 475, 549, 560, 993, 1092, 1563
HapII	CCGG	3 cut(s)	60, 561, 1176
HhaI	GCGC	7 cut(s)	84, 247, 272, 274, 1466, 1478, 1955
Hin6I	GCGC	7 cut(s)	82, 245, 270, 272, 1464, 1476, 1953
HinP1I	GCGC	7 cut(s)	82, 245, 270, 272, 1464, 1476, 1953
HincII	GTYRAC	1 cut(s)	1843
HindII	GTYRAC	1 cut(s)	1843
HinfI	GANTC	8 cut(s)	109, 377, 848, 1186, 1399, 1533, 1808, 2054
HpaII	CCGG	3 cut(s)	60, 561, 1176
HphI	GGTGA	5 cut(s)	95, 137, 1462, 1608, 2032
Hpy166II	GTNNAC	6 cut(s)	886, 1143, 1453, 1831, 1843, 2037
Hpy188I	TCNGA	8 cut(s)	69, 114, 299, 320, 646, 795, 1266, 2084
Hpy8I	GTNNAC	6 cut(s)	886, 1143, 1453, 1831, 1843, 2037
Hpy99I	CGWCG	2 cut(s)	53, 1931
HpyAV	CCTTC	9 cut(s)	66, 116, 235, 576, 1073, 1182, 1385, 1406, 1893
HpyCH4III	ACNGT	4 cut(s)	872, 2002, 2068, 2092
HpyCH4IV	ACGT	1 cut(s)	1220
HpyF10VI	GCNNNNNNNGC	9 cut(s)	18, 33, 90, 166, 351, 683, 1084, 1304, 1712
HpyF3I	CTNAG	4 cut(s)	66, 1583, 1662, 1906
HpySE526I	ACGT	1 cut(s)	1220
HspAI	GCGC	7 cut(s)	82, 245, 270, 272, 1464, 1476, 1953
KpnI	GGTACC	1 cut(s)	1043
LmnI	GCTCC	5 cut(s)	199, 492, 1304, 1422, 1611
LweI	GCATC	5 cut(s)	156, 290, 611, 848, 1487
MaeI	CTAG	4 cut(s)	447, 1380, 1436, 1767
MaeII	ACGT	1 cut(s)	1220
MaeIII	GTNAC	2 cut(s)	1216, 1534
MbiI	CCGCTC	2 cut(s)	260, 1872
MfeI	CAATTG	2 cut(s)	419, 930
MflI	RGATCY	4 cut(s)	294, 1276, 1384, 1879
MhlI	GDGCHC	1 cut(s)	143
MlsI	TGGCCA	1 cut(s)	1563
MluNI	TGGCCA	1 cut(s)	1563
MlyI	GAGTC	3 cut(s)	1542, 1802, 2063
MmeI	TCCRAC	4 cut(s)	950, 1280, 1506, 1816
Mox20I	TGGCCA	1 cut(s)	1563
MroXI	GAANNNNTTC	2 cut(s)	1457, 1628
MscI	TGGCCA	1 cut(s)	1563
MseI	TTAA	3 cut(s)	765, 2070, 2103
MslI	CAYNNNNRTG	3 cut(s)	150, 893, 1865
Msp20I	TGGCCA	1 cut(s)	1563
MspA1I	CMGCKG	2 cut(s)	15, 1290
MspI	CCGG	3 cut(s)	60, 561, 1176
MspR9I	CCNGG	4 cut(s)	591, 1177, 1560, 1731
MunI	CAATTG	2 cut(s)	419, 930
Mva1269I	GAATGC	2 cut(s)	418, 1757
MvaI	CCWGG	3 cut(s)	591, 1560, 1731
MvnI	CGCG	1 cut(s)	272
MwoI	GCNNNNNNNGC	9 cut(s)	18, 33, 90, 166, 351, 683, 1084, 1304, 1712
NciI	CCSGG	1 cut(s)	1177
NcoI	CCATGG	2 cut(s)	550, 687
NlaIV	GGNNCC	7 cut(s)	195, 233, 548, 900, 1041, 1607, 1881
NmuCI	GTSAC	1 cut(s)	1534
NsbI	TGCGCA	1 cut(s)	1465
NspI	RCATGY	4 cut(s)	892, 1198, 1235, 1783
PagI	TCATGA	2 cut(s)	663, 864
PauI	GCGCGC	1 cut(s)	270
PceI	AGGCCT	2 cut(s)	56, 1092
PciI	ACATGT	3 cut(s)	888, 1231, 1779
PcsI	WCGNNNNNNNCGW	1 cut(s)	777
PctI	GAATGC	2 cut(s)	418, 1757
PdmI	GAANNNNTTC	2 cut(s)	1457, 1628
PfeI	GAWTC	5 cut(s)	109, 377, 848, 1186, 1399
PflMI	CCANNNNNTGG	1 cut(s)	556
PleI	GAGTC	3 cut(s)	1541, 1802, 2062
PpsI	GAGTC	3 cut(s)	1541, 1802, 2062
Ppu21I	YACGTR	1 cut(s)	1221
PpuMI	RGGWCCY	1 cut(s)	231
PscI	ACATGT	3 cut(s)	888, 1231, 1779
Psp5II	RGGWCCY	1 cut(s)	231
Psp6I	CCWGG	3 cut(s)	589, 1558, 1729
PspFI	CCCAGC	1 cut(s)	483
PspGI	CCWGG	3 cut(s)	589, 1558, 1729
PspN4I	GGNNCC	7 cut(s)	195, 233, 548, 900, 1041, 1607, 1881
PspPI	GGNCC	8 cut(s)	231, 325, 547, 563, 714, 898, 992, 1497
PspPPI	RGGWCCY	1 cut(s)	231
PstI	CTGCAG	1 cut(s)	1332
PsuI	RGATCY	4 cut(s)	294, 1276, 1384, 1879
PteI	GCGCGC	1 cut(s)	270
RsaI	GTAC	4 cut(s)	8, 1010, 1041, 1832
RsaNI	GTAC	4 cut(s)	7, 1009, 1040, 1831
RseI	CAYNNNNRTG	3 cut(s)	150, 893, 1865
SaqAI	TTAA	3 cut(s)	765, 2070, 2103
Sau96I	GGNCC	8 cut(s)	231, 325, 547, 563, 714, 898, 992, 1497
SchI	GAGTC	3 cut(s)	1542, 1802, 2063
ScrFI	CCNGG	4 cut(s)	591, 1177, 1560, 1731
SduI	GDGCHC	1 cut(s)	143
SfaNI	GCATC	5 cut(s)	156, 290, 611, 848, 1487
SfcI	CTRYAG	1 cut(s)	1328
SinI	GGWCC	5 cut(s)	231, 563, 714, 898, 1497
SmiMI	CAYNNNNRTG	3 cut(s)	150, 893, 1865
SmlI	CTYRAG	1 cut(s)	329
SmoI	CTYRAG	1 cut(s)	329
SseBI	AGGCCT	2 cut(s)	56, 1092
SspMI	CTAG	4 cut(s)	447, 1380, 1436, 1767
StuI	AGGCCT	2 cut(s)	56, 1092
StyD4I	CCNGG	4 cut(s)	589, 1175, 1558, 1729
StyI	CCWWGG	3 cut(s)	550, 687, 1212
TaaI	ACNGT	4 cut(s)	872, 2002, 2068, 2092
TaiI	ACGT	1 cut(s)	1223
TaqI	TCGA	7 cut(s)	277, 771, 954, 1083, 1156, 1657, 1753
TatI	WGTACW	2 cut(s)	1008, 1830
TauI	GCSGC	1 cut(s)	1875
TfiI	GAWTC	5 cut(s)	109, 377, 848, 1186, 1399
Tru1I	TTAA	3 cut(s)	765, 2070, 2103
Tru9I	TTAA	3 cut(s)	765, 2070, 2103
TscAI	CASTG	6 cut(s)	1157, 1558, 1670, 1698, 2007, 2095
TseFI	GTSAC	1 cut(s)	1534
Tsp45I	GTSAC	1 cut(s)	1534
TspDTI	ATGAA	8 cut(s)	168, 254, 497, 735, 749, 881, 1445, 1662
TspGWI	ACGGA	1 cut(s)	1500
TspRI	CASTG	6 cut(s)	1157, 1558, 1670, 1698, 2007, 2095
Van91I	CCANNNNNTGG	1 cut(s)	556
VpaK11BI	GGWCC	5 cut(s)	231, 563, 714, 898, 1497
XagI	CCTNNNNNAGG	1 cut(s)	781
XapI	RAATTY	3 cut(s)	209, 908, 2013
XceI	RCATGY	4 cut(s)	892, 1198, 1235, 1783
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1715
XmiI	GTMKAC	1 cut(s)	885
XmnI	GAANNNNTTC	2 cut(s)	1457, 1628
XspI	CTAG	4 cut(s)	447, 1380, 1436, 1767

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.