AT1G18620

DUF761-associated sequence motif

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
OG0005458
Physical Location & Seq
Forward (+)
6409655 .. 6414569
4915 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G18620.3

Sequence Viewer

Length: 2937 bp
ATGGCTGCAAAGCTTCTTCATACATTGGCAGATGAAAACTCGGATCTGCAGAAGAAAATTGGATGTATGAATGGGATTTTCCAAATCTTTGATCGACACCATATTCTCACAAGCCGGCGTAAAAGTCTTACTTTAGGTAATGCACATGTCAATAGTATCAACTTTGAAAGAGACTCTGTTGATGCAATTTGTCAGCAAAGATCAGCATTTCAGTGTCAGGACTCAAACCTTGTTAGCAGTAATGGATTGAGCGAGAAACTAACGAGGCTATCAACCGAATGTTCGAGGGTTTCTTTCTCATCATCGTGTTCATCATCTTCCCCGTTGTCTTCCGAGGTCAACAGAGAAGTTCAGCCTGAGATTTCTGCGGATGACCGAGTCATTTTTCCAGAATCTCCTACAAGTGATCCAGTGATGAGCCAAGGAACTGGTGCTCGTGTGGGACTTGACCTTAGAGATGTTGTTAGAGATTCTATGTATAGAGAAGCTAGAGGGCTTTCTGATGTATGTAGGCAAAACAGAAGAGAGGATTCTCCAAGACCCTATGGTTTGAAGCAATCCAGGCCTGTTGATTTCAATGAATCCTGCAGAGCTCTAGCCAAACTTAGAAAAACATCTCATCACTATTACAATGAGGTTGACATGAAAGATACATCCCGTTACTATGTTGATTCTCGCGGAAAGTCGAAATCCGGGAAGAAGCTGAAAGAGTTGCCTAGGCTTTCGTTGGACAGTAGAGACCACGTTGATCTCAAATCAGGTAATAAACTTTCTGAAAGTTTCAGTAGAAGCTCTAGCATGAACAAAGTTTCAGGTAGCCCGAAACGGCCTCCTAGTGTTGTTGCCAAGCTAATGGGCTTGGAAACATTACCGGGTTCTCCTTTGAGCAGAGACAGATTCAACATGTTTGATGATAACAGTGATCCATTCGCAAGATCATTGAGGGAAAATAGCCTGAACCGTTCTCTTCGGTTCTCTCCTAGCTCGCCCAGAAGCTTAGGAAAGGACCCTGCTGCTTCTTCTTCTTCTCCAAGATGGAGAAGCTCTGAGTTTGTTATGAAACCCTTATCAAGTTTGAGATATCCCATTGAACCAGCTCCTTGGAAGCAAACCGAGAGAAACCGGTTTTCTCAAAAGCAAGCCTGCAGGTCTGTGAAATCTCTGTCACAGTCGATGGAGGGAAAATTGAAAGATCTTGAGGTTAAACATTCGGGAAAGGATCTCAGAGCTCTTAAAGATATATTAGAGGCAATGCAATCAAAAGGTCTCTTTGATACTCGAAAGCAACAACAATGCTCAAACTTGGAAGCTCAAAGAGATTACGAACTGGCAGATTCTGCAACTTCTAAGCATGATTCAATAGACCTGAGAAACCCGGTGATTCCATCCAATATGAGAGGTCCAATTGTGATAATGAAACCTGCCAGACTTGTTGAAAAATCTGGTATCCCTTCATCATCTCTGATTCCCATTCACAGTCTATCCGGTCTTAATAAGACCTGCAGAGAAGAACCTGTAAATGTTAGAAGAAGTTCAACAAGTAGAAAGGCAGTAAAAGATCGTAGTCCTGGAAACCAAAGAGCTGAACCATGTATCAGTTCTGACAAGAAATCTAGCAGCAGAAACGTGATGTCTTCTCAGGTTTACAAAGAAAGCACTTCAAAGAATTCAGGGCCTGCAAGTTCAAAGTTGCAGCAGATGAAGCCTGAGCATGACAAGCGTTCTCGACCACCAGCCTCTCCATCTGATTCAAGCAAATTAAGAAAACAAATAAGCCGACAACCCGTGGAATCTACTACTTCTCCTGGTGGGAGGCGTAGTAGACCCAGGGATCAGAGGAGCTTGCAGCAAAATGATGGCCAACTTAGCCAAATGAGCAATAAATCTAGGACTAAAATAGAAGCCACCTTGAGTATCGAAAATGGTGGAAAGAGCCCATCTGTTATAGAGGCAGCCAAAGCTGTAGTCTCTAACTTAATACAGAATAAGTCCAGTCCAACGTTTAGTGAAGATGGATCATCAGAACATCCAAGTCCAGTTTCTGTTCTCAATGCAGAAATCTACCGAGAGATCGAACCATCTCCTGTGAAAATCCAAGCTAGTGAAGGCAGTGTTAATGGCTCTATTAACTCGGGTGTTGAACATTGCGAGGAGGACCAGTGGAATCCAGCTTATAGCTTCTCAAAGACAACAACAAGCTTTTCGCCAGAGATGAACCGAAAGAAGCTTCAGAATGTTGAGCATTTGGTTCAAAAGCTAAAAAGACTAAACTCTAGCCATGACGAAACCAGTCAAGATTACATTGCATCTTTATGCGAGAACAGTGATCCTGACACCGATCACAGATACATTTCCGAGATTCTTTTAGCCTCGGGTCTTCTCCTCAGAGATCTTGGCTCAGGATTAACAACTTTTCAACTGCACCCTTCAGGCCACCCAATTAATCCGGAGCTGTTCCTTGTGATTGAGCAAACTAAAGGATGCAGCAGTAGCAGCAATGAAAAGATCAACCGCAAACTTGTGTTCGATGCTGTTAATGAAATGCTCGGGAAGAAGCTAGCTTTTGTTGAGAGCTATGTAGATCCATGGATGAAGCAAGCTAAAGCGAGAAAGAAGGTCTTAAGTGCACAAAATCTGTTGAAGGAACTATGTTCAGAGATAGAGATACTACAAAAGCAAGCCAAGAAGAGATCAGAAAACTTGTTGTTGTTGGAGGAAGAAGAAGAAGAAGAAGAAGATTTCTTGAAATGTATATTGGATGAAGATATGGCAATCCAATCTGAGAAATGGACAGACTTTGATGATGCAATCCCTGGTTTAGTGCTTGACATGGAGAGGCTTCTCTTCAAAGATCTGGTGAAAGAGATTGTGCACGGTGAGATTGATCGGCTGCAAGGAAACTCAAGGAGACAGAAAACGGTTTTGGCTGACGAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4378 VARLMGL

Protein Analysis

978

Amino Acids

109.43

Weight (kDa)

9.07

Isoelectric Point (pI)

68.36

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF4378 PF14309 780 - 955 4e-36 Domain of unknown function (DUF4378)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 3 cut(s) 1137, 1429, 1508
AccI GTMKAC 1 cut(s) 1822
AccII CGCG 1 cut(s) 678
AccIII TCCGGA 1 cut(s) 2446
AciI CCGC 3 cut(s) 368, 678, 2512
AclI AACGTT 1 cut(s) 2000
AclWI GGATC 8 cut(s) 51, 401, 917, 1227, 1839, 2023, 2321, 2576
AcoI YGGCCR 1 cut(s) 1858
AcsI RAATTY 1 cut(s) 1666
AcuI CTGAAG 2 cut(s) 2213, 2412
AflII CTTAAG 1 cut(s) 2620
AflIII ACRYGT 2 cut(s) 145, 903
AgeI ACCGGT 1 cut(s) 1122
AjnI CCWGG 5 cut(s) 560, 1567, 1804, 1826, 2812
AjuI GAANNNNNNNTTGG 5 cut(s) 2023, 2055, 2738, 2770, 2906
Alw21I GWGCWC 5 cut(s) 436, 595, 1231, 2629, 2874
Alw26I GTCTC 6 cut(s) 165, 732, 885, 1271, 1972, 2902
Alw44I GTGCAC 2 cut(s) 2625, 2870
AlwI GGATC 8 cut(s) 51, 401, 917, 1227, 1839, 2023, 2321, 2576
AlwNI CAGNNNCTG 3 cut(s) 1337, 1676, 2042
Ama87I CYCGRG 3 cut(s) 2131, 2371, 2546
Aor13HI TCCGGA 1 cut(s) 2446
AoxI GGCC 5 cut(s) 563, 827, 1673, 1858, 2431
ApaLI GTGCAC 2 cut(s) 2625, 2870
ApeKI GCWGC 9 cut(s) 5, 1013, 1617, 1693, 1846, 1952, 2484, 2493, 2890
ApoI RAATTY 1 cut(s) 1666
ArsI GACNNNNNNTTYG 2 cut(s) 1950, 1982
AseI ATTAAT 1 cut(s) 2442
AsiGI ACCGGT 1 cut(s) 1122
Asp700I GAANNNNTTC 1 cut(s) 1531
AspA2I CCTAGG 1 cut(s) 716
AspS9I GGNCC 4 cut(s) 1006, 1400, 1673, 2155
AsuC2I CCSGG 3 cut(s) 694, 873, 1376
AsuHPI GGTGA 3 cut(s) 1390, 2869, 2888
AsuNHI GCTAGC 1 cut(s) 2557
AvaI CYCGRG 3 cut(s) 2131, 2371, 2546
AvaII GGWCC 3 cut(s) 1006, 1400, 2155
AvrII CCTAGG 1 cut(s) 716
BaeGI GKGCMC 2 cut(s) 2629, 2874
BalI TGGCCA 1 cut(s) 1860
BanII GRGCYC 3 cut(s) 595, 1231, 1937
BauI CACGAG 1 cut(s) 435
BbsI GAAGAC 3 cut(s) 321, 1626, 2369
Bbv12I GWGCWC 5 cut(s) 436, 595, 1231, 2629, 2874
BbvI GCAGC 8 cut(s) 1000, 1629, 1705, 1858, 1964, 2496, 2505, 2877
BccI CCATC 8 cut(s) 1029, 1168, 1393, 1750, 1850, 1945, 2006, 2086
BceAI ACGGC 1 cut(s) 842
BciT130I CCWGG 5 cut(s) 562, 1569, 1806, 1828, 2814
BciVI GTATCC 1 cut(s) 1457
BcnI CCSGG 3 cut(s) 694, 873, 1376
BcoDI GTCTC 6 cut(s) 165, 732, 885, 1271, 1972, 2902
BfmI CTRYAG 5 cut(s) 47, 586, 1144, 1501, 1962
BfrI CTTAAG 1 cut(s) 2620
BfuAI ACCTGC 3 cut(s) 1137, 1429, 1508
BfuI GTATCC 1 cut(s) 1457
BglII AGATCT 3 cut(s) 1192, 2389, 2851
BisI GCNGC 9 cut(s) 6, 1014, 1618, 1694, 1847, 1953, 2485, 2494, 2891
BlnI CCTAGG 1 cut(s) 716
BlsI GCNGC 9 cut(s) 7, 1015, 1619, 1695, 1848, 1954, 2486, 2495, 2892
Bme1390I CCNGG 8 cut(s) 562, 694, 873, 1376, 1569, 1806, 1828, 2814
Bme18I GGWCC 3 cut(s) 1006, 1400, 2155
BmeT110I CYCGRG 3 cut(s) 2131, 2371, 2546
BmgT120I GGNCC 4 cut(s) 1006, 1400, 1673, 2155
BmiI GGNNCC 1 cut(s) 1008
BmrFI CCNGG 8 cut(s) 562, 694, 873, 1376, 1569, 1806, 1828, 2814
BmsI GCATC 5 cut(s) 172, 2315, 2471, 2518, 2794
BmtI GCTAGC 1 cut(s) 2561
BpiI GAAGAC 3 cut(s) 321, 1626, 2369
Bpu10I CCTNAGC 3 cut(s) 997, 1707, 2398
BpuEI CTTGAG 3 cut(s) 1217, 1930, 2887
BpuMI CCSGG 3 cut(s) 694, 873, 1376
BsaI GGTCTC 2 cut(s) 732, 1271
BsaWI WCCGGW 3 cut(s) 1122, 1484, 2446
BsaXI ACNNNNNCTCC 6 cut(s) 1786, 1804, 1816, 1834, 2144, 2174
Bse118I RCCGGY 2 cut(s) 114, 1122
Bse1I ACTGG 7 cut(s) 410, 433, 1332, 1992, 2036, 2158, 2289
Bse3DI GCAATG 4 cut(s) 1257, 2143, 2301, 2503
BseAI TCCGGA 1 cut(s) 2446
BseBI CCWGG 5 cut(s) 562, 1569, 1806, 1828, 2814
BseGI GGATG 8 cut(s) 68, 376, 653, 1385, 2026, 2486, 2595, 2764
BseMI GCAATG 4 cut(s) 1257, 2143, 2301, 2503
BseMII CTCAG 9 cut(s) 348, 1038, 1237, 1358, 1652, 1698, 2398, 2412, 2772
BseNI ACTGG 7 cut(s) 410, 433, 1332, 1992, 2036, 2158, 2289
BseRI GAGGAG 3 cut(s) 1852, 2165, 2372
BseSI GKGCMC 2 cut(s) 2629, 2874
BseXI GCAGC 8 cut(s) 1000, 1629, 1705, 1858, 1964, 2496, 2505, 2877
BsgI GTGCAG 1 cut(s) 2405
Bsh1236I CGCG 1 cut(s) 678
BshFI GGCC 5 cut(s) 565, 829, 1675, 1860, 2433
BshTI ACCGGT 1 cut(s) 1122
BsiHKAI GWGCWC 5 cut(s) 436, 595, 1231, 2629, 2874
BsiHKCI CYCGRG 3 cut(s) 2131, 2371, 2546
BsiSI CCGG 7 cut(s) 115, 693, 872, 1123, 1376, 1485, 2447
BslFI GGGAC 1 cut(s) 456
BsmAI GTCTC 6 cut(s) 165, 732, 885, 1271, 1972, 2902
BsmFI GGGAC 1 cut(s) 456
BsnI GGCC 5 cut(s) 565, 829, 1675, 1860, 2433
Bso31I GGTCTC 2 cut(s) 732, 1271
BsoBI CYCGRG 3 cut(s) 2131, 2371, 2546
Bsp1286I GDGCHC 6 cut(s) 436, 595, 1231, 1937, 2629, 2874
Bsp13I TCCGGA 1 cut(s) 2446
Bsp19I CCATGG 1 cut(s) 2585
BspACI CCGC 3 cut(s) 368, 678, 2512
BspANI GGCC 5 cut(s) 565, 829, 1675, 1860, 2433
BspCNI CTCAG 9 cut(s) 349, 1039, 1236, 1359, 1651, 1699, 2397, 2411, 2773
BspEI TCCGGA 1 cut(s) 2446
BspFNI CGCG 1 cut(s) 678
BspLI GGNNCC 1 cut(s) 1008
BspMAI CTGCAG 4 cut(s) 51, 590, 1148, 1505
BspMI ACCTGC 3 cut(s) 1137, 1429, 1508
BspOI GCTAGC 1 cut(s) 2561
BspPI GGATC 8 cut(s) 51, 401, 917, 1227, 1839, 2023, 2321, 2576
BspTI CTTAAG 1 cut(s) 2620
BspTNI GGTCTC 2 cut(s) 732, 1271
BsrDI GCAATG 4 cut(s) 1257, 2143, 2301, 2503
BsrFI RCCGGY 2 cut(s) 114, 1122
BsrI ACTGG 7 cut(s) 410, 433, 1332, 1992, 2036, 2158, 2289
BssAI RCCGGY 2 cut(s) 114, 1122
BssSI CACGAG 1 cut(s) 435
BssT1I CCWWGG 4 cut(s) 421, 716, 1100, 2585
Bst2BI CACGAG 1 cut(s) 435
Bst2UI CCWGG 5 cut(s) 562, 1569, 1806, 1828, 2814
Bst4CI ACNGT 8 cut(s) 734, 920, 962, 1170, 1478, 2324, 2876, 2920
Bst6I CTCTTC 4 cut(s) 517, 972, 2681, 2849
BstAFI CTTAAG 1 cut(s) 2620
BstAPI GCANNNNNTGC 1 cut(s) 1337
BstC8I GCNNGC 9 cut(s) 116, 986, 1140, 1144, 1677, 1844, 2559, 2598, 2679
BstDSI CCRYGG 2 cut(s) 1785, 2585
BstF5I GGATG 8 cut(s) 68, 376, 653, 1385, 2026, 2486, 2595, 2764
BstFNI CGCG 1 cut(s) 678
BstMAI GTCTC 6 cut(s) 165, 732, 885, 1271, 1972, 2902
BstMWI GCNNNNNNNGC 9 cut(s) 562, 1337, 1702, 1717, 1866, 1875, 1958, 2490, 2493
BstNI CCWGG 5 cut(s) 562, 1569, 1806, 1828, 2814
BstNSI RCATGY 2 cut(s) 149, 907
BstSCI CCNGG 8 cut(s) 560, 692, 871, 1374, 1567, 1804, 1826, 2812
BstSFI CTRYAG 5 cut(s) 47, 586, 1144, 1501, 1962
BstSLI GKGCMC 2 cut(s) 2629, 2874
BstUI CGCG 1 cut(s) 678
BstV1I GCAGC 8 cut(s) 1000, 1629, 1705, 1858, 1964, 2496, 2505, 2877
BstV2I GAAGAC 3 cut(s) 321, 1626, 2369
BstX2I RGATCY 6 cut(s) 43, 1192, 1219, 2389, 2581, 2851
BstXI CCANNNNNNTGG 3 cut(s) 428, 853, 1101
BstYI RGATCY 6 cut(s) 43, 1192, 1219, 2389, 2581, 2851
BsuI GTATCC 1 cut(s) 1457
BsuRI GGCC 5 cut(s) 565, 829, 1675, 1860, 2433
BtgI CCRYGG 2 cut(s) 1785, 2585
BtsCI GGATG 8 cut(s) 68, 376, 653, 1385, 2026, 2486, 2595, 2764
BtsI GCAGTG 1 cut(s) 2116
BtsIMutI CAGTG 6 cut(s) 218, 417, 925, 2116, 2165, 2329
BveI ACCTGC 3 cut(s) 1137, 1429, 1508
Cac8I GCNNGC 9 cut(s) 116, 986, 1140, 1144, 1677, 1844, 2559, 2598, 2679
CaiI CAGNNNCTG 3 cut(s) 1337, 1676, 2042
Cfr10I RCCGGY 2 cut(s) 114, 1122
Cfr13I GGNCC 4 cut(s) 1006, 1400, 1673, 2155
CspAI ACCGGT 1 cut(s) 1122
EaeI YGGCCR 1 cut(s) 1858
Eam1104I CTCTTC 4 cut(s) 517, 972, 2681, 2849
EarI CTCTTC 4 cut(s) 517, 972, 2681, 2849
Ecl136II GAGCTC 2 cut(s) 593, 1229
Eco130I CCWWGG 4 cut(s) 421, 716, 1100, 2585
Eco147I AGGCCT 1 cut(s) 565
Eco24I GRGCYC 3 cut(s) 595, 1231, 1937
Eco31I GGTCTC 2 cut(s) 732, 1271
Eco32I GATATC 1 cut(s) 1082
Eco47I GGWCC 3 cut(s) 1006, 1400, 2155
Eco53kI GAGCTC 2 cut(s) 593, 1229
Eco57I CTGAAG 2 cut(s) 2213, 2412
Eco88I CYCGRG 3 cut(s) 2131, 2371, 2546
EcoICRI GAGCTC 2 cut(s) 593, 1229
EcoO109I RGGNCCY 2 cut(s) 1006, 1673
EcoRI GAATTC 1 cut(s) 1666
EcoRII CCWGG 5 cut(s) 560, 1567, 1804, 1826, 2812
EcoRV GATATC 1 cut(s) 1082
EcoT14I CCWWGG 4 cut(s) 421, 716, 1100, 2585
EcoT38I GRGCYC 3 cut(s) 595, 1231, 1937
ErhI CCWWGG 4 cut(s) 421, 716, 1100, 2585
FalI AAGNNNNNCTT 4 cut(s) 115, 147, 2603, 2635
FaqI GGGAC 1 cut(s) 456
FblI GTMKAC 1 cut(s) 1822
Fnu4HI GCNGC 9 cut(s) 6, 1014, 1618, 1694, 1847, 1953, 2485, 2494, 2891
FokI GGATG 8 cut(s) 75, 383, 640, 1372, 2013, 2493, 2602, 2771
FriOI GRGCYC 3 cut(s) 595, 1231, 1937
Fsp4HI GCNGC 9 cut(s) 6, 1014, 1618, 1694, 1847, 1953, 2485, 2494, 2891
GluI GCNGC 9 cut(s) 6, 1014, 1618, 1694, 1847, 1953, 2485, 2494, 2891
HaeIII GGCC 5 cut(s) 565, 829, 1675, 1860, 2433
HapII CCGG 7 cut(s) 115, 693, 872, 1123, 1376, 1485, 2447
HincII GTYRAC 2 cut(s) 340, 640
HindII GTYRAC 2 cut(s) 340, 640
HindIII AAGCTT 4 cut(s) 11, 994, 2197, 2225
HpaII CCGG 7 cut(s) 115, 693, 872, 1123, 1376, 1485, 2447
HphI GGTGA 3 cut(s) 1390, 2869, 2888
Hpy166II GTNNAC 6 cut(s) 340, 640, 1645, 1823, 2627, 2872
Hpy8I GTNNAC 6 cut(s) 340, 640, 1645, 1823, 2627, 2872
HpyAV CCTTC 5 cut(s) 1461, 2099, 2436, 2608, 2635
HpyCH4III ACNGT 8 cut(s) 734, 920, 962, 1170, 1478, 2324, 2876, 2920
HpyCH4IV ACGT 3 cut(s) 744, 1626, 2000
HpyF10VI GCNNNNNNNGC 9 cut(s) 562, 1337, 1702, 1717, 1866, 1875, 1958, 2490, 2493
HpySE526I ACGT 3 cut(s) 744, 1626, 2000
Kpn2I TCCGGA 1 cut(s) 2446
KroI GCCGGC 1 cut(s) 114
KroNI GCCGGC 1 cut(s) 116
LmnI GCTCC 3 cut(s) 1102, 1839, 2449
Lsp1109I GCAGC 8 cut(s) 1000, 1629, 1705, 1858, 1964, 2496, 2505, 2877
LweI GCATC 5 cut(s) 172, 2315, 2471, 2518, 2794
MaeII ACGT 3 cut(s) 744, 1626, 2000
MaeIII GTNAC 2 cut(s) 659, 1164
MfeI CAATTG 1 cut(s) 1404
MflI RGATCY 6 cut(s) 43, 1192, 1219, 2389, 2581, 2851
MhlI GDGCHC 6 cut(s) 436, 595, 1231, 1937, 2629, 2874
MlsI TGGCCA 1 cut(s) 1860
MluCI AATT 7 cut(s) 57, 186, 1184, 1404, 1666, 1757, 2439
MluNI TGGCCA 1 cut(s) 1860
MlyI GAGTC 3 cut(s) 167, 215, 387
MmeI TCCRAC 3 cut(s) 708, 2021, 2691
Mox20I TGGCCA 1 cut(s) 1860
MroI TCCGGA 1 cut(s) 2446
MroNI GCCGGC 1 cut(s) 114
MroXI GAANNNNTTC 1 cut(s) 1531
MscI TGGCCA 1 cut(s) 1860
MslI CAYNNNNRTG 3 cut(s) 211, 304, 2311
Msp20I TGGCCA 1 cut(s) 1860
MspCI CTTAAG 1 cut(s) 2620
MspI CCGG 7 cut(s) 115, 693, 872, 1123, 1376, 1485, 2447
MspR9I CCNGG 8 cut(s) 562, 694, 873, 1376, 1569, 1806, 1828, 2814
MunI CAATTG 1 cut(s) 1404
MvaI CCWGG 5 cut(s) 562, 1569, 1806, 1828, 2814
MvnI CGCG 1 cut(s) 678
MwoI GCNNNNNNNGC 9 cut(s) 562, 1337, 1702, 1717, 1866, 1875, 1958, 2490, 2493
NaeI GCCGGC 1 cut(s) 116
NciI CCSGG 3 cut(s) 694, 873, 1376
NcoI CCATGG 1 cut(s) 2585
NgoMIV GCCGGC 1 cut(s) 114
NheI GCTAGC 1 cut(s) 2557
NlaIV GGNNCC 1 cut(s) 1008
NmuCI GTSAC 1 cut(s) 1164
NspI RCATGY 2 cut(s) 149, 907
PasI CCCWGGG 1 cut(s) 1827
PceI AGGCCT 1 cut(s) 565
PciI ACATGT 2 cut(s) 145, 903
PdiI GCCGGC 1 cut(s) 116
PdmI GAANNNNTTC 1 cut(s) 1531
PflFI GACNNNGTC 1 cut(s) 377
PfoI TCCNGGA 2 cut(s) 692, 1567
PinAI ACCGGT 1 cut(s) 1122
PkrI GCNGC 9 cut(s) 7, 1015, 1619, 1695, 1848, 1954, 2486, 2495, 2892
PleI GAGTC 3 cut(s) 167, 215, 386
PpsI GAGTC 3 cut(s) 167, 215, 386
PpuMI RGGWCCY 1 cut(s) 1006
PscI ACATGT 2 cut(s) 145, 903
PshBI ATTAAT 1 cut(s) 2442
Psp124BI GAGCTC 2 cut(s) 595, 1231
Psp1406I AACGTT 1 cut(s) 2000
Psp5II RGGWCCY 1 cut(s) 1006
Psp6I CCWGG 5 cut(s) 560, 1567, 1804, 1826, 2812
PspGI CCWGG 5 cut(s) 560, 1567, 1804, 1826, 2812
PspN4I GGNNCC 1 cut(s) 1008
PspPI GGNCC 4 cut(s) 1006, 1400, 1673, 2155
PspPPI RGGWCCY 1 cut(s) 1006
PstI CTGCAG 4 cut(s) 51, 590, 1148, 1505
PstNI CAGNNNCTG 3 cut(s) 1337, 1676, 2042
PsuI RGATCY 6 cut(s) 43, 1192, 1219, 2389, 2581, 2851
PsyI GACNNNGTC 1 cut(s) 377
RseI CAYNNNNRTG 3 cut(s) 211, 304, 2311
SacI GAGCTC 2 cut(s) 595, 1231
SatI GCNGC 9 cut(s) 6, 1014, 1618, 1694, 1847, 1953, 2485, 2494, 2891
Sau96I GGNCC 4 cut(s) 1006, 1400, 1673, 2155
SbfI CCTGCAGG 1 cut(s) 1148
SchI GAGTC 3 cut(s) 167, 215, 387
ScrFI CCNGG 8 cut(s) 562, 694, 873, 1376, 1569, 1806, 1828, 2814
SdaI CCTGCAGG 1 cut(s) 1148
SduI GDGCHC 6 cut(s) 436, 595, 1231, 1937, 2629, 2874
SfaNI GCATC 5 cut(s) 172, 2315, 2471, 2518, 2794
SfcI CTRYAG 5 cut(s) 47, 586, 1144, 1501, 1962
SinI GGWCC 3 cut(s) 1006, 1400, 2155
SmiMI CAYNNNNRTG 3 cut(s) 211, 304, 2311
SmlI CTYRAG 4 cut(s) 1196, 1909, 2620, 2902
SmoI CTYRAG 4 cut(s) 1196, 1909, 2620, 2902
Sse8387I CCTGCAGG 1 cut(s) 1148
Sse9I AATT 7 cut(s) 57, 186, 1184, 1404, 1666, 1757, 2439
SseBI AGGCCT 1 cut(s) 565
SsiI CCGC 3 cut(s) 368, 678, 2512
SstI GAGCTC 2 cut(s) 595, 1231
StuI AGGCCT 1 cut(s) 565
StyD4I CCNGG 8 cut(s) 560, 692, 871, 1374, 1567, 1804, 1826, 2812
StyI CCWWGG 4 cut(s) 421, 716, 1100, 2585
TaaI ACNGT 8 cut(s) 734, 920, 962, 1170, 1478, 2324, 2876, 2920
TaiI ACGT 3 cut(s) 747, 1629, 2003
TaqI TCGA 9 cut(s) 94, 284, 686, 1172, 1279, 1726, 1917, 2073, 2526
TaqII GACCGA 1 cut(s) 390
TasI AATT 7 cut(s) 57, 186, 1184, 1404, 1666, 1757, 2439
TscAI CASTG 6 cut(s) 218, 417, 925, 2116, 2165, 2329
TseFI GTSAC 1 cut(s) 1164
TseI GCWGC 9 cut(s) 5, 1013, 1617, 1693, 1846, 1952, 2484, 2493, 2890
Tsp45I GTSAC 1 cut(s) 1164
TspRI CASTG 6 cut(s) 218, 417, 925, 2116, 2165, 2329
Tth111I GACNNNGTC 1 cut(s) 377
Vha464I CTTAAG 1 cut(s) 2620
VneI GTGCAC 2 cut(s) 2625, 2870
VpaK11BI GGWCC 3 cut(s) 1006, 1400, 2155
VspI ATTAAT 1 cut(s) 2442
XapI RAATTY 1 cut(s) 1666
XceI RCATGY 2 cut(s) 149, 907
XmaJI CCTAGG 1 cut(s) 716
XmiI GTMKAC 1 cut(s) 1822
XmnI GAANNNNTTC 1 cut(s) 1531
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.