Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000006

Orthogroup ID

OG0005458

Physical Location & Seq

Genomic Coordinates Reverse (-)

58339540 .. 58345382

Gene Structure 5843 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug06G0455600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1842 bp

ATGGAGCAGAGCGAAACGGTTTCCGGTACGGCGCCGAAGAAATTGGCGAGGCAATTGGATTTCACGGCGCCGGTTCAGCCGTCCGTTAACTCTGCGTTGCCGGAGCGGTCTGGACCGGCGGCGGTTCAAGTACAGTCGCAGTCGCAGCCACAGCCGCATCTGCGGGCGCATCCACAGACGCAGCCGTGGTCACAGCCACAGCTACAGCTACAGTCACAGTCACAGTCACAGCCACAGCAGCTGCATAACTCGCCGGCACAGTTGGCGTTACAGTCACAACAGCAGGGGACGGTGGTGCAATCGCCGAAGCCGTATTTGACGCAGGCGGTCTTGCACTTTCAGGCGAGGCCGGTGGGGCCGACGATGCCCGTGAACGGCCGGATTGCGCACTTGCCACCGAAATTGGGAAAACACGAGTCTCCTAAACCACGCGCACGCAGCGAAGCGAAAGAAAGTACTCCAAAGAAACAAAAGCTGTGCAATTGTAAAAATTCACGGTGCCTCAAGTTGTACTGTGAGTGCTTTGCAGCTGGAATTTATTGTAAAGGATGCAACTGCATAAATTGTCATAATAATGTGGACAATGAAGCTGCTAGGCAGGATGCGGTTGGAGCAATTTTAGAGCGTAACCCAAAAGCATTCAGACCAAAGATTGCTAGCAGTCCACATGAATCTCGCGATTCTTGGGAAGATGCTGGGGAGGTTCAAAAGCACCACAAAGGATGTGCTTGCAGGAAGTCTGGGTGTCTCAAGAAGTACTGTGAGTGCTTCCAAGCCAATGTTCTGTGTTCTGAAAACTGTAAATGCATGGACTGCAAGAACTTTGATGGAAGTGAAGAAAGAAGGGCTATCTTTCATGAAGATCACAATACGATAGCCAACATGCAACAGGCAAATGCTGCCATTAGTGGGGCCATTGGATCTTCTGGGTTTGGGCCTCTGGTGTCCAGACAAAGACCGAGCGATGAACTTTTTTCTGGCATTGGAGCCAGAGATCAATCAGTTCACCGGATTACACAGGCTCAGCAGGAAAATCACTTAAGACCTCCTATGGCCTCTTCTTCTCTGTTATCTGTTCCTACTTTTGGTACTCCTAATGCTGCAGTATCAGGATCTTCAAAACCCACATACAGATCTATGTTGGCAAATATCATCCAACCTGAGAACATAAAGGATCTGTGTTCACGTCTGGTTGTAGTTTCAGGAGAAGCTGCAAAGGCACTTGCAGAAAATAGGCAAAAAGAGACGATTGATAAGACTACTACCATCTCAGCCACTCGAGAGGGGAAAGAAAGTAAAAGGGAACAAGATCAAAATTCTGCGCATGGTGACCGTTTGGGAATGAATCAAGCAGATAGAGATGGCAGCAGTGGTTCTGGATCAGATGGAGGCGATGTGCAAAATAGTAGGCCAATGTCCCCTGGAACACTTGCCCTGATGTGTGATGAACAAGATAAGATGTTTATGGCAGCTGAGCTGCCAAATGGGATAACAACGAATAGTCCAAGCACAACTCAGAATCCATCTCAGGAAATAGGTTGCACGGAGGTTTATGAAGAGCAGGAAAGAGTTGTCCTCACAGGATTCAGGGATTTCCTAAACCTGCTTATTACTCGTGGTAGTATAAAAGAAACAATGTGTTCTCCCATAGCCAAAAGGGAGAGGGAAATCCAAAAGGATTCTGTAGAGGGTGGAACCCCAAAGAAACCCAGGTGCGAGAAAGCAACATACAGCAATGACATTGGGAAATCTCCTGCTTCAACAAATGGTAAAGTGCTTCAGTCAGTAGTCACTTATGTCTCTGAAGTTGGATTGCCCTTGAAAAATAATACTGGGCAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF4378 VARLMGL

Protein Analysis

613

Amino Acids

66.7

Weight (kDa)

8.71

Isoelectric Point (pI)

59.63

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TCR	PF03638	158 - 192	2.6e-11	Tesmin/TSO1-like CXC domain, cysteine-rich domain
TCR	PF03638	240 - 274	2.5e-12	Tesmin/TSO1-like CXC domain, cysteine-rich domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005458)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G18620 AT1G18620 AT1G18620 AT1G18620 AT1G18620 AT1G74160 AT1G74160 AT1G74160
fragaria_vesca	FvH4_5g13690 FvH4_5g13690 FvH4_5g13690
malus_domestica	MD06G1203000.v1.1 MD14G1213600.v1.1
prunus_persica	Prupe.5G206500_v2.0.a1
pyrus_communis	pycom06g18080 pycom14g17690
rosa_chinensis	RchiOBHm_Chr7g0183251
rosa_laevigata	RLG00000005062
rosa_multiflora	Rmu_co8293079.1_g000001 Rmu_co8448119.1_g000001 Rmu_sc0008744.1_g000012
rosa_roxburghii	Rroxscaffold_3G00270620
rosa_rugosa	Rorug06G0455500 Rorug06G0455600
rosa_samantha	Rh7AG057500 Rh7BG057400 Rh7CG059000 Rh7DG057200
rosa_wichuraiana	Rw7G004710

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	2 cut(s)	387, 1323
Acc36I	ACCTGC	1 cut(s)	1611
AccB1I	GGYRCC	3 cut(s)	31, 67, 498
AccBSI	CCGCTC	1 cut(s)	106
AccII	CGCG	2 cut(s)	432, 678
AciI	CCGC	7 cut(s)	106, 119, 122, 155, 163, 326, 605
AclWI	GGATC	4 cut(s)	928, 1120, 1182, 1387
AcoI	YGGCCR	1 cut(s)	376
AcsI	RAATTY	3 cut(s)	490, 534, 1315
AcuI	CTGAAG	2 cut(s)	1763, 1824
AcyI	GRCGYC	2 cut(s)	32, 68
AfaI	GTAC	6 cut(s)	28, 132, 457, 512, 758, 1090
AfiI	CCNNNNNNNGG	4 cut(s)	374, 404, 909, 1085
AflII	CTTAAG	1 cut(s)	1039
AgsI	TTSAA	5 cut(s)	128, 707, 1119, 1761, 1822
AjiI	CACGTC	1 cut(s)	1187
AjnI	CCWGG	2 cut(s)	1420, 1709
AjuI	GAANNNNNNNTTGG	2 cut(s)	765, 797
AluBI	AGCT	9 cut(s)	202, 208, 241, 475, 530, 590, 1211, 1472, 1477
AluI	AGCT	9 cut(s)	202, 208, 241, 475, 530, 590, 1211, 1472, 1477
Alw26I	GTCTC	4 cut(s)	423, 752, 1238, 1804
AlwI	GGATC	4 cut(s)	928, 1120, 1182, 1387
AlwNI	CAGNNNCTG	1 cut(s)	241
Ama87I	CYCGRG	1 cut(s)	1278
AoxI	GGCC	7 cut(s)	347, 356, 376, 912, 935, 1053, 1409
ApoI	RAATTY	3 cut(s)	490, 534, 1315
AspLEI	GCGC	6 cut(s)	34, 70, 169, 388, 434, 1324
AspS9I	GGNCC	4 cut(s)	113, 356, 912, 935
AsuHPI	GGTGA	2 cut(s)	998, 1340
AsuNHI	GCTAGC	1 cut(s)	656
AvaI	CYCGRG	1 cut(s)	1278
AvaII	GGWCC	1 cut(s)	113
BanI	GGYRCC	3 cut(s)	31, 67, 498
BauI	CACGAG	2 cut(s)	413, 1614
BccI	CCATC	5 cut(s)	821, 1274, 1355, 1379, 1531
BceAI	ACGGC	6 cut(s)	45, 64, 81, 169, 295, 391
BciT130I	CCWGG	2 cut(s)	1422, 1711
BcoDI	GTCTC	4 cut(s)	423, 752, 1238, 1804
BfaI	CTAG	2 cut(s)	594, 657
BfmI	CTRYAG	4 cut(s)	203, 209, 1101, 1683
BfoI	RGCGCY	2 cut(s)	35, 71
BfrI	CTTAAG	1 cut(s)	1039
BfuAI	ACCTGC	1 cut(s)	1611
BglI	GCCNNNNNGGC	1 cut(s)	355
BglII	AGATCT	1 cut(s)	1133
BlpI	GCTNAGC	2 cut(s)	1023, 1473
BmcAI	AGTACT	2 cut(s)	457, 758
Bme1390I	CCNGG	2 cut(s)	1422, 1711
Bme18I	GGWCC	1 cut(s)	113
BmeT110I	CYCGRG	1 cut(s)	1278
BmgBI	CACGTC	1 cut(s)	1187
BmgT120I	GGNCC	4 cut(s)	113, 356, 912, 935
BmiI	GGNNCC	7 cut(s)	33, 69, 357, 500, 913, 988, 1696
BmrFI	CCNGG	2 cut(s)	1422, 1711
BmrI	ACTGGG	1 cut(s)	1842
BmsI	GCATC	6 cut(s)	166, 178, 354, 539, 592, 682
BmtI	GCTAGC	1 cut(s)	660
BmuI	ACTGGG	1 cut(s)	1842
BplI	GAGNNNNNCTC	2 cut(s)	1560, 1592
Bpu1102I	GCTNAGC	2 cut(s)	1023, 1473
BpuEI	CTTGAG	2 cut(s)	488, 734
BsaHI	GRCGYC	2 cut(s)	32, 68
BsaJI	CCNNGG	3 cut(s)	185, 1420, 1709
BsaWI	WCCGGW	2 cut(s)	23, 1008
BsaXI	ACNNNNNCTCC	2 cut(s)	1380, 1410
Bsc4I	CCNNNNNNNGG	4 cut(s)	374, 404, 909, 1085
Bse118I	RCCGGY	4 cut(s)	70, 115, 253, 349
Bse1I	ACTGG	1 cut(s)	1837
Bse3DI	GCAATG	1 cut(s)	1741
BseBI	CCWGG	2 cut(s)	1422, 1711
BseDI	CCNNGG	3 cut(s)	185, 1420, 1709
BseGI	GGATG	5 cut(s)	169, 554, 607, 728, 1152
BseLI	CCNNNNNNNGG	4 cut(s)	374, 404, 909, 1085
BseMI	GCAATG	1 cut(s)	1741
BseMII	CTCAG	6 cut(s)	1037, 1152, 1284, 1464, 1529, 1541
BseNI	ACTGG	1 cut(s)	1837
BseX3I	CGGCCG	1 cut(s)	376
BseYI	CCCAGC	1 cut(s)	695
Bsh1236I	CGCG	2 cut(s)	432, 678
Bsh1285I	CGRYCG	1 cut(s)	379
BshFI	GGCC	7 cut(s)	349, 358, 378, 914, 937, 1055, 1411
BshNI	GGYRCC	3 cut(s)	31, 67, 498
BsiEI	CGRYCG	1 cut(s)	379
BsiHKCI	CYCGRG	1 cut(s)	1278
BsiSI	CCGG	8 cut(s)	24, 71, 101, 116, 254, 350, 379, 1009
BslFI	GGGAC	2 cut(s)	301, 1402
BslI	CCNNNNNNNGG	4 cut(s)	374, 404, 909, 1085
BsmAI	GTCTC	4 cut(s)	423, 752, 1238, 1804
BsmBI	CGTCTC	1 cut(s)	1238
BsmFI	GGGAC	2 cut(s)	301, 1402
BsmI	GAATGC	1 cut(s)	638
BsnI	GGCC	7 cut(s)	349, 358, 378, 914, 937, 1055, 1411
BsoBI	CYCGRG	1 cut(s)	1278
Bsp143I	GATC	8 cut(s)	862, 920, 994, 1112, 1133, 1174, 1309, 1379
Bsp1720I	GCTNAGC	2 cut(s)	1023, 1473
Bsp68I	TCGCGA	1 cut(s)	678
BspACI	CCGC	7 cut(s)	106, 119, 122, 155, 163, 326, 605
BspANI	GGCC	7 cut(s)	349, 358, 378, 914, 937, 1055, 1411
BspCNI	CTCAG	6 cut(s)	1036, 1153, 1283, 1465, 1528, 1540
BspFNI	CGCG	2 cut(s)	432, 678
BspHI	TCATGA	1 cut(s)	856
BspLI	GGNNCC	7 cut(s)	33, 69, 357, 500, 913, 988, 1696
BspMAI	CTGCAG	1 cut(s)	1105
BspMI	ACCTGC	1 cut(s)	1611
BspOI	GCTAGC	1 cut(s)	660
BspPI	GGATC	4 cut(s)	928, 1120, 1182, 1387
BspQI	GCTCTTC	1 cut(s)	1551
BspT107I	GGYRCC	3 cut(s)	31, 67, 498
BspTI	CTTAAG	1 cut(s)	1039
BsrBI	CCGCTC	1 cut(s)	106
BsrDI	GCAATG	1 cut(s)	1741
BsrFI	RCCGGY	4 cut(s)	70, 115, 253, 349
BsrI	ACTGG	1 cut(s)	1837
BssAI	RCCGGY	4 cut(s)	70, 115, 253, 349
BssECI	CCNNGG	3 cut(s)	185, 1420, 1709
BssMI	GATC	8 cut(s)	862, 920, 994, 1112, 1133, 1174, 1309, 1379
BssNI	GRCGYC	2 cut(s)	32, 68
BssSI	CACGAG	2 cut(s)	413, 1614
Bst2BI	CACGAG	2 cut(s)	413, 1614
Bst2UI	CCWGG	2 cut(s)	1422, 1711
Bst6I	CTCTTC	2 cut(s)	1063, 1551
BstACI	GRCGYC	2 cut(s)	32, 68
BstAFI	CTTAAG	1 cut(s)	1039
BstAPI	GCANNNNNTGC	2 cut(s)	813, 899
BstC8I	GCNNGC	6 cut(s)	165, 255, 324, 436, 658, 730
BstDEI	CTNAG	6 cut(s)	1023, 1161, 1270, 1473, 1515, 1527
BstDSI	CCRYGG	1 cut(s)	185
BstEII	GGTNACC	1 cut(s)	1328
BstF5I	GGATG	5 cut(s)	169, 554, 607, 728, 1152
BstFNI	CGCG	2 cut(s)	432, 678
BstH2I	RGCGCY	2 cut(s)	35, 71
BstHHI	GCGC	6 cut(s)	34, 70, 169, 388, 434, 1324
BstKTI	GATC	8 cut(s)	865, 923, 997, 1115, 1136, 1177, 1312, 1382
BstMAI	GTCTC	4 cut(s)	423, 752, 1238, 1804
BstMBI	GATC	8 cut(s)	862, 920, 994, 1112, 1133, 1174, 1309, 1379
BstMCI	CGRYCG	1 cut(s)	379
BstNI	CCWGG	2 cut(s)	1422, 1711
BstNSI	RCATGY	1 cut(s)	886
BstPI	GGTNACC	1 cut(s)	1328
BstSCI	CCNGG	2 cut(s)	1420, 1709
BstSFI	CTRYAG	4 cut(s)	203, 209, 1101, 1683
BstUI	CGCG	2 cut(s)	432, 678
BstX2I	RGATCY	4 cut(s)	920, 1112, 1133, 1174
BstYI	RGATCY	4 cut(s)	920, 1112, 1133, 1174
BstZI	CGGCCG	1 cut(s)	376
BsuRI	GGCC	7 cut(s)	349, 358, 378, 914, 937, 1055, 1411
BtgI	CCRYGG	1 cut(s)	185
BtgZI	GCGATG	2 cut(s)	978, 1407
BtrI	CACGTC	1 cut(s)	1187
BtsCI	GGATG	5 cut(s)	169, 554, 607, 728, 1152
BtsI	GCAGTG	1 cut(s)	1375
BtsIMutI	CAGTG	1 cut(s)	1375
BtuMI	TCGCGA	1 cut(s)	678
BveI	ACCTGC	1 cut(s)	1611
Cac8I	GCNNGC	6 cut(s)	165, 255, 324, 436, 658, 730
CaiI	CAGNNNCTG	1 cut(s)	241
CciI	TCATGA	1 cut(s)	856
CfoI	GCGC	6 cut(s)	34, 70, 169, 388, 434, 1324
Cfr10I	RCCGGY	4 cut(s)	70, 115, 253, 349
Cfr13I	GGNCC	4 cut(s)	113, 356, 912, 935
CseI	GACGC	2 cut(s)	187, 328
Csp6I	GTAC	6 cut(s)	27, 131, 456, 511, 757, 1089
CspCI	CAANNNNNGTGG	2 cut(s)	384, 419
CviAII	CATG	5 cut(s)	668, 808, 857, 883, 1325
CviQI	GTAC	6 cut(s)	27, 131, 456, 511, 757, 1089
DdeI	CTNAG	6 cut(s)	1023, 1161, 1270, 1473, 1515, 1527
DinI	GGCGCC	2 cut(s)	33, 69
DpnI	GATC	8 cut(s)	864, 922, 996, 1114, 1135, 1176, 1311, 1381
DpnII	GATC	8 cut(s)	862, 920, 994, 1112, 1133, 1174, 1309, 1379
EaeI	YGGCCR	1 cut(s)	376
EagI	CGGCCG	1 cut(s)	376
Eam1104I	CTCTTC	2 cut(s)	1063, 1551
EarI	CTCTTC	2 cut(s)	1063, 1551
EclXI	CGGCCG	1 cut(s)	376
Eco47I	GGWCC	1 cut(s)	113
Eco52I	CGGCCG	1 cut(s)	376
Eco57I	CTGAAG	2 cut(s)	1763, 1824
Eco88I	CYCGRG	1 cut(s)	1278
Eco91I	GGTNACC	1 cut(s)	1328
EcoO65I	GGTNACC	1 cut(s)	1328
EcoRII	CCWGG	2 cut(s)	1420, 1709
EcoT22I	ATGCAT	1 cut(s)	809
EgeI	GGCGCC	2 cut(s)	33, 69
EheI	GGCGCC	2 cut(s)	33, 69
Esp3I	CGTCTC	1 cut(s)	1238
FaeI	CATG	5 cut(s)	671, 811, 860, 886, 1328
FaqI	GGGAC	2 cut(s)	301, 1402
FatI	CATG	5 cut(s)	667, 807, 856, 882, 1324
FauI	CCCGC	1 cut(s)	156
FokI	GGATG	5 cut(s)	156, 561, 614, 735, 1139
FspBI	CTAG	2 cut(s)	594, 657
FspI	TGCGCA	2 cut(s)	387, 1323
GlaI	GCGC	6 cut(s)	33, 69, 168, 387, 433, 1323
GsaI	CCCAGC	1 cut(s)	699
HaeII	RGCGCY	2 cut(s)	35, 71
HaeIII	GGCC	7 cut(s)	349, 358, 378, 914, 937, 1055, 1411
HapII	CCGG	8 cut(s)	24, 71, 101, 116, 254, 350, 379, 1009
HgaI	GACGC	2 cut(s)	187, 328
HhaI	GCGC	6 cut(s)	34, 70, 169, 388, 434, 1324
Hin1I	GRCGYC	2 cut(s)	32, 68
Hin1II	CATG	5 cut(s)	671, 811, 860, 886, 1328
Hin6I	GCGC	6 cut(s)	32, 68, 167, 386, 432, 1322
HinP1I	GCGC	6 cut(s)	32, 68, 167, 386, 432, 1322
HincII	GTYRAC	1 cut(s)	88
HindII	GTYRAC	1 cut(s)	88
HinfI	GANTC	7 cut(s)	416, 671, 680, 1345, 1519, 1584, 1679
HpaI	GTTAAC	1 cut(s)	88
HpaII	CCGG	8 cut(s)	24, 71, 101, 116, 254, 350, 379, 1009
HphI	GGTGA	2 cut(s)	998, 1340
Hpy166II	GTNNAC	6 cut(s)	88, 373, 580, 665, 1006, 1184
Hpy188I	TCNGA	5 cut(s)	644, 793, 1384, 1518, 1804
Hpy8I	GTNNAC	6 cut(s)	88, 373, 580, 665, 1006, 1184
Hpy99I	CGWCG	1 cut(s)	364
HpyAV	CCTTC	1 cut(s)	837
HpyCH4IV	ACGT	1 cut(s)	1186
HpyF3I	CTNAG	6 cut(s)	1023, 1161, 1270, 1473, 1515, 1527
HpySE526I	ACGT	1 cut(s)	1186
Hsp92I	GRCGYC	2 cut(s)	32, 68
Hsp92II	CATG	5 cut(s)	671, 811, 860, 886, 1328
HspAI	GCGC	6 cut(s)	32, 68, 167, 386, 432, 1322
KasI	GGCGCC	2 cut(s)	31, 67
KroI	GCCGGC	1 cut(s)	253
KroNI	GCCGGC	1 cut(s)	255
KspAI	GTTAAC	1 cut(s)	88
Kzo9I	GATC	8 cut(s)	862, 920, 994, 1112, 1133, 1174, 1309, 1379
LguI	GCTCTTC	1 cut(s)	1551
LmnI	GCTCC	4 cut(s)	4, 103, 611, 986
LweI	GCATC	6 cut(s)	166, 178, 354, 539, 592, 682
MaeI	CTAG	2 cut(s)	594, 657
MaeII	ACGT	1 cut(s)	1186
MaeIII	GTNAC	9 cut(s)	189, 213, 219, 225, 267, 273, 626, 1328, 1789
MalI	GATC	8 cut(s)	864, 922, 996, 1114, 1135, 1176, 1311, 1381
MbiI	CCGCTC	1 cut(s)	106
MboI	GATC	8 cut(s)	862, 920, 994, 1112, 1133, 1174, 1309, 1379
MboII	GAAGA	9 cut(s)	49, 701, 848, 872, 915, 1050, 1053, 1107, 1568
MfeI	CAATTG	2 cut(s)	53, 481
MflI	RGATCY	4 cut(s)	920, 1112, 1133, 1174
MluCI	AATT	9 cut(s)	41, 53, 401, 481, 490, 534, 562, 615, 1315
Mly113I	GGCGCC	2 cut(s)	32, 68
MlyI	GAGTC	1 cut(s)	425
MmeI	TCCRAC	3 cut(s)	589, 1180, 1789
Mph1103I	ATGCAT	1 cut(s)	809
MroNI	GCCGGC	1 cut(s)	253
MseI	TTAA	2 cut(s)	87, 1040
MslI	CAYNNNNRTG	1 cut(s)	573
MspA1I	CMGCKG	3 cut(s)	241, 530, 1472
MspCI	CTTAAG	1 cut(s)	1039
MspI	CCGG	8 cut(s)	24, 71, 101, 116, 254, 350, 379, 1009
MspR9I	CCNGG	2 cut(s)	1422, 1711
MunI	CAATTG	2 cut(s)	53, 481
Mva1269I	GAATGC	1 cut(s)	638
MvaI	CCWGG	2 cut(s)	1422, 1711
MvnI	CGCG	2 cut(s)	432, 678
NaeI	GCCGGC	1 cut(s)	255
NarI	GGCGCC	2 cut(s)	32, 68
NdeII	GATC	8 cut(s)	862, 920, 994, 1112, 1133, 1174, 1309, 1379
NgoMIV	GCCGGC	1 cut(s)	253
NheI	GCTAGC	1 cut(s)	656
NlaIII	CATG	5 cut(s)	671, 811, 860, 886, 1328
NlaIV	GGNNCC	7 cut(s)	33, 69, 357, 500, 913, 988, 1696
NmuCI	GTSAC	7 cut(s)	189, 213, 219, 225, 273, 1328, 1789
NruI	TCGCGA	1 cut(s)	678
NsbI	TGCGCA	2 cut(s)	387, 1323
NsiI	ATGCAT	1 cut(s)	809
NspI	RCATGY	1 cut(s)	886
PaeR7I	CTCGAG	1 cut(s)	1278
PagI	TCATGA	1 cut(s)	856
PciSI	GCTCTTC	1 cut(s)	1551
PcsI	WCGNNNNNNNCGW	1 cut(s)	308
PctI	GAATGC	1 cut(s)	638
PdiI	GCCGGC	1 cut(s)	255
PfeI	GAWTC	6 cut(s)	671, 680, 1345, 1519, 1584, 1679
PleI	GAGTC	1 cut(s)	424
PluTI	GGCGCC	2 cut(s)	35, 71
PpsI	GAGTC	1 cut(s)	424
Psp6I	CCWGG	2 cut(s)	1420, 1709
PspEI	GGTNACC	1 cut(s)	1328
PspFI	CCCAGC	1 cut(s)	695
PspGI	CCWGG	2 cut(s)	1420, 1709
PspN4I	GGNNCC	7 cut(s)	33, 69, 357, 500, 913, 988, 1696
PspPI	GGNCC	4 cut(s)	113, 356, 912, 935
PstI	CTGCAG	1 cut(s)	1105
PstNI	CAGNNNCTG	1 cut(s)	241
PsuI	RGATCY	4 cut(s)	920, 1112, 1133, 1174
PvuII	CAGCTG	3 cut(s)	241, 530, 1472
RruI	TCGCGA	1 cut(s)	678
RsaI	GTAC	6 cut(s)	28, 132, 457, 512, 758, 1090
RsaNI	GTAC	6 cut(s)	27, 131, 456, 511, 757, 1089
RseI	CAYNNNNRTG	1 cut(s)	573
SapI	GCTCTTC	1 cut(s)	1551
SaqAI	TTAA	2 cut(s)	87, 1040
Sau3AI	GATC	8 cut(s)	862, 920, 994, 1112, 1133, 1174, 1309, 1379
Sau96I	GGNCC	4 cut(s)	113, 356, 912, 935
ScaI	AGTACT	2 cut(s)	457, 758
SchI	GAGTC	1 cut(s)	425
ScrFI	CCNGG	2 cut(s)	1422, 1711
SfaNI	GCATC	6 cut(s)	166, 178, 354, 539, 592, 682
SfcI	CTRYAG	4 cut(s)	203, 209, 1101, 1683
SfiI	GGCCNNNNNGGCC	1 cut(s)	355
SfoI	GGCGCC	2 cut(s)	33, 69
Sfr274I	CTCGAG	1 cut(s)	1278
SinI	GGWCC	1 cut(s)	113
SlaI	CTCGAG	1 cut(s)	1278
SmiMI	CAYNNNNRTG	1 cut(s)	573
SmlI	CTYRAG	4 cut(s)	503, 749, 1039, 1278
SmoI	CTYRAG	4 cut(s)	503, 749, 1039, 1278
Sse9I	AATT	9 cut(s)	41, 53, 401, 481, 490, 534, 562, 615, 1315
SsiI	CCGC	7 cut(s)	106, 119, 122, 155, 163, 326, 605
SspDI	GGCGCC	2 cut(s)	31, 67
SspMI	CTAG	2 cut(s)	594, 657
StyD4I	CCNGG	2 cut(s)	1420, 1709
TaiI	ACGT	1 cut(s)	1189
TaqI	TCGA	1 cut(s)	1279
TaqII	GACCGA	1 cut(s)	973
TasI	AATT	9 cut(s)	41, 53, 401, 481, 490, 534, 562, 615, 1315
TatI	WGTACW	4 cut(s)	130, 455, 510, 756
TauI	GCSGC	2 cut(s)	122, 157
TfiI	GAWTC	6 cut(s)	671, 680, 1345, 1519, 1584, 1679
Tru1I	TTAA	2 cut(s)	87, 1040
Tru9I	TTAA	2 cut(s)	87, 1040
TscAI	CASTG	1 cut(s)	1375
TseFI	GTSAC	7 cut(s)	189, 213, 219, 225, 273, 1328, 1789
Tsp45I	GTSAC	7 cut(s)	189, 213, 219, 225, 273, 1328, 1789
TspDTI	ATGAA	8 cut(s)	600, 684, 845, 873, 981, 1358, 1461, 1569
TspGWI	ACGGA	2 cut(s)	73, 1559
TspRI	CASTG	1 cut(s)	1375
Vha464I	CTTAAG	1 cut(s)	1039
VpaK11BI	GGWCC	1 cut(s)	113
XapI	RAATTY	3 cut(s)	490, 534, 1315
XceI	RCATGY	1 cut(s)	886
XhoI	CTCGAG	1 cut(s)	1278
XspI	CTAG	2 cut(s)	594, 657
ZrmI	AGTACT	2 cut(s)	457, 758
Zsp2I	ATGCAT	1 cut(s)	809

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.