Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000006

Orthogroup ID

OG0005458

Physical Location & Seq

Genomic Coordinates Reverse (-)

58335449 .. 58338797

Gene Structure 3349 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug06G0455500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1413 bp

ATGGAACAACACTCCAAAAACACCTTTACATTTTGTAATTATTATTTCCACAAAACAACAATAGTACTTCTTTTAGTTTCCATTATAACGCTAACGCTAACACAAACCCAACTCTTCTGCTCTCCAATGAGCACAATGACCCACGCTCTCATCATCCATCTTCCTCTGCAGCACTCCACTCTATCATCACCATCCACCACCCTCCTCCCGCACGTGCGACCTCCCCTGGCCCACACGTGGGCACGCTCCCCGCCAAAAATATTCCCCTATAAATACCGGTCCCTGTCTCAGTCTCAGTCGACCGGACCCAGATCAAACACTGACACCCTAGTAACCCAAATGGCCGAGGAAGCTGTAGACGCCCAGAAGCTTCGTTCCGAGTTTTACAGAGTCTTGAATAGCAGGCGATGTGGCGAAGTTCCGTTAACGGTGGAGCCGGCGAAACCGGTGACCAATCCTTTGTTTCAGGAGGCTAACCCTCCAAGCTTCAGCGAGGCAATGAACGCTTGCCCCAAGGCTAACATTACCAACTTTAAGGAGAAGCTACAAGAGGAAAATCTTTACCTAATTACTGAGGCAGGAGAGCAGGGGAGGTTACCTGTGTTGATTTTGAGCATGAAGGAAGAAAAAAGTAGCCAGAAAAAGCCTGCTGTTGTTTTTCTGCATAGTACTAACAAGAACAAAGAGTGGTTGAGACCATTGCTTGAGGCCTATGCTTCAAGGGGATATGTAGCGATTGCGATTGATTCTCGCTACCATGGTGAACGTGCCACTAATATAACCACTTACCGAGATGCTCTCATATCAGCATGGAAAAGAGGAAATACAATGCCATTCTTATTTGATACGGTCTGGGACTTGATAAAATTGGCAGATTATCTAACACAGAGGGAGGATGTTGATCCTGCTAGGCTAGGAATCACTGGTGAATCACTGGGAGGTATGCATGCATGGTTGGCTGCTGCTGCTGACACCCGCTATGCAGTGGTTGTCCCTATAATTGGTGTTCAGGGGTTTCGATGGGCGATAGACAATGATAAGTGGCAGGCTCGAGTGGACAGTATAAAACCTGTTTTCGAAGAAGCACGAATTGATCTAAACAAGAGTGCGATTGACAAAGAAGTAGTGGAGAAGGTGTGGGATAGGATTGCTCCAGGTCTGGCCTCTCAGTTTGATTCTCCTTATACAGTGCCAGCTATTGCACCGCGTCCTCTATTGATTTTAAATGGTGCAGAAGATCCTCGATGTCCACTCGCTGGTCTGGTTGTTCCCAAAGCGAGAGCACTCAAGGCTTATGAAGATGCACAGCGTGTAGATAAATTTAAGTTAATAGCAGAGCCCGGCATCGGCCACCAAATGACCGCTCTTATGGTAAAAGAGGCAAGCCACTGGTTTGATAAATTTCTCCAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF4378 VARLMGL

Protein Analysis

470

Amino Acids

52.87

Weight (kDa)

8.75

Isoelectric Point (pI)

46.54

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AXE1	PF05448	166 - 333	5e-07	Acetyl xylan esterase (AXE1)
Abhydrolase_6	PF12697	218 - 453	2.7e-08	Alpha/beta hydrolase family
Peptidase_S9	PF00326	238 - 454	4.6e-10	Prolyl oligopeptidase family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005458)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G18620 AT1G18620 AT1G18620 AT1G18620 AT1G18620 AT1G74160 AT1G74160 AT1G74160
fragaria_vesca	FvH4_5g13690 FvH4_5g13690 FvH4_5g13690
malus_domestica	MD06G1203000.v1.1 MD14G1213600.v1.1
prunus_persica	Prupe.5G206500_v2.0.a1
pyrus_communis	pycom06g18080 pycom14g17690
rosa_chinensis	RchiOBHm_Chr7g0183251
rosa_laevigata	RLG00000005062
rosa_multiflora	Rmu_co8293079.1_g000001 Rmu_co8448119.1_g000001 Rmu_sc0008744.1_g000012
rosa_roxburghii	Rroxscaffold_3G00270620
rosa_rugosa	Rorug06G0455500 Rorug06G0455600
rosa_samantha	Rh7AG057500 Rh7BG057400 Rh7CG059000 Rh7DG057200
rosa_wichuraiana	Rw7G004710

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	86
AccB7I	CCANNNNNTGG	1 cut(s)	1256
AccBSI	CCGCTC	1 cut(s)	1364
AccI	GTMKAC	2 cut(s)	299, 357
AccII	CGCG	1 cut(s)	1207
AciI	CCGC	5 cut(s)	209, 251, 976, 1205, 1362
AclWI	GGATC	2 cut(s)	896, 1232
AcoI	YGGCCR	2 cut(s)	342, 1348
AcsI	RAATTY	2 cut(s)	1319, 1400
AcuI	CTGAAG	1 cut(s)	472
AcvI	CACGTG	2 cut(s)	214, 237
AcyI	GRCGYC	1 cut(s)	360
AdeI	CACNNNGTG	1 cut(s)	1310
AfaI	GTAC	2 cut(s)	66, 670
AfiI	CCNNNNNNNGG	5 cut(s)	237, 238, 1001, 1256, 1346
AflIII	ACRYGT	1 cut(s)	234
AgeI	ACCGGT	2 cut(s)	276, 445
AgsI	TTSAA	2 cut(s)	397, 720
AjnI	CCWGG	2 cut(s)	225, 1153
AluBI	AGCT	5 cut(s)	353, 370, 486, 544, 1196
AluI	AGCT	5 cut(s)	353, 370, 486, 544, 1196
Alw21I	GWGCWC	2 cut(s)	134, 1285
Alw26I	GTCTC	3 cut(s)	291, 297, 688
AlwI	GGATC	2 cut(s)	896, 1232
Ama87I	CYCGRG	1 cut(s)	1050
AoxI	GGCC	5 cut(s)	228, 342, 708, 1161, 1348
ApeKI	GCWGC	4 cut(s)	169, 959, 962, 965
ApoI	RAATTY	2 cut(s)	1319, 1400
ArsI	GACNNNNNNTTYG	2 cut(s)	442, 474
AsiGI	ACCGGT	2 cut(s)	276, 445
AspS9I	GGNCC	3 cut(s)	229, 279, 305
AsuC2I	CCSGG	1 cut(s)	1341
AsuHPI	GGTGA	4 cut(s)	180, 460, 773, 938
AsuII	TTCGAA	1 cut(s)	1077
AvaI	CYCGRG	1 cut(s)	1050
AvaII	GGWCC	2 cut(s)	279, 305
BaeGI	GKGCMC	1 cut(s)	244
BanII	GRGCYC	1 cut(s)	1341
BbrPI	CACGTG	2 cut(s)	214, 237
Bbv12I	GWGCWC	2 cut(s)	134, 1285
BbvI	GCAGC	4 cut(s)	181, 946, 949, 952
BccI	CCATC	3 cut(s)	165, 199, 1014
BciT130I	CCWGG	2 cut(s)	227, 1155
BcnI	CCSGG	1 cut(s)	1341
BcoDI	GTCTC	3 cut(s)	291, 297, 688
BfaI	CTAG	3 cut(s)	329, 909, 914
BfmI	CTRYAG	2 cut(s)	167, 354
BisI	GCNGC	4 cut(s)	170, 960, 963, 966
BlsI	GCNGC	4 cut(s)	171, 961, 964, 967
BmcAI	AGTACT	2 cut(s)	66, 670
Bme1390I	CCNGG	3 cut(s)	227, 1155, 1341
Bme18I	GGWCC	2 cut(s)	279, 305
BmeT110I	CYCGRG	1 cut(s)	1050
BmgT120I	GGNCC	3 cut(s)	229, 279, 305
BmiI	GGNNCC	3 cut(s)	281, 307, 435
BmrFI	CCNGG	3 cut(s)	227, 1155, 1341
BmrI	ACTGGG	1 cut(s)	944
BmsI	GCATC	3 cut(s)	784, 1291, 1353
BmuI	ACTGGG	1 cut(s)	944
BplI	GAGNNNNNCTC	2 cut(s)	783, 815
BpmI	CTGGAG	2 cut(s)	1137, 1391
Bpu14I	TTCGAA	1 cut(s)	1077
BpuEI	CTTGAG	2 cut(s)	725, 1271
BpuMI	CCSGG	1 cut(s)	1341
BsaAI	YACGTR	2 cut(s)	214, 237
BsaBI	GATNNNNATC	1 cut(s)	900
BsaHI	GRCGYC	1 cut(s)	360
BsaI	GGTCTC	1 cut(s)	688
BsaJI	CCNNGG	4 cut(s)	225, 345, 513, 757
BsaWI	WCCGGW	3 cut(s)	276, 302, 445
BsaXI	ACNNNNNCTCC	2 cut(s)	1121, 1151
Bsc4I	CCNNNNNNNGG	5 cut(s)	237, 238, 1001, 1256, 1346
Bse118I	RCCGGY	3 cut(s)	276, 436, 445
Bse1I	ACTGG	4 cut(s)	928, 939, 1394, 1408
Bse3DI	GCAATG	2 cut(s)	504, 698
Bse8I	GATNNNNATC	1 cut(s)	900
BseBI	CCWGG	2 cut(s)	227, 1155
BseDI	CCNNGG	4 cut(s)	225, 345, 513, 757
BseGI	GGATG	3 cut(s)	153, 191, 901
BseJI	GATNNNNATC	1 cut(s)	900
BseLI	CCNNNNNNNGG	5 cut(s)	237, 238, 1001, 1256, 1346
BseMI	GCAATG	2 cut(s)	504, 698
BseMII	CTCAG	4 cut(s)	302, 308, 564, 1181
BseNI	ACTGG	4 cut(s)	928, 939, 1394, 1408
BseRI	GAGGAG	1 cut(s)	194
BseSI	GKGCMC	1 cut(s)	244
BseXI	GCAGC	4 cut(s)	181, 946, 949, 952
BsgI	GTGCAG	1 cut(s)	1251
Bsh1236I	CGCG	1 cut(s)	1207
Bsh1285I	CGRYCG	1 cut(s)	303
BshFI	GGCC	5 cut(s)	230, 344, 710, 1163, 1350
BshTI	ACCGGT	2 cut(s)	276, 445
BsiEI	CGRYCG	1 cut(s)	303
BsiHKAI	GWGCWC	2 cut(s)	134, 1285
BsiHKCI	CYCGRG	1 cut(s)	1050
BsiSI	CCGG	5 cut(s)	277, 303, 437, 446, 1341
BslFI	GGGAC	3 cut(s)	265, 869, 977
BslI	CCNNNNNNNGG	5 cut(s)	237, 238, 1001, 1256, 1346
BsmAI	GTCTC	3 cut(s)	291, 297, 688
BsmFI	GGGAC	3 cut(s)	265, 869, 977
BsnI	GGCC	5 cut(s)	230, 344, 710, 1163, 1350
Bso31I	GGTCTC	1 cut(s)	688
BsoBI	CYCGRG	1 cut(s)	1050
Bsp119I	TTCGAA	1 cut(s)	1077
Bsp1286I	GDGCHC	4 cut(s)	134, 244, 1285, 1341
Bsp143I	GATC	4 cut(s)	311, 901, 1093, 1237
Bsp19I	CCATGG	1 cut(s)	757
BspACI	CCGC	5 cut(s)	209, 251, 976, 1205, 1362
BspANI	GGCC	5 cut(s)	230, 344, 710, 1163, 1350
BspCNI	CTCAG	4 cut(s)	301, 307, 565, 1180
BspFNI	CGCG	1 cut(s)	1207
BspLI	GGNNCC	3 cut(s)	281, 307, 435
BspMAI	CTGCAG	1 cut(s)	171
BspPI	GGATC	2 cut(s)	896, 1232
BspT104I	TTCGAA	1 cut(s)	1077
BspTNI	GGTCTC	1 cut(s)	688
BsrBI	CCGCTC	1 cut(s)	1364
BsrDI	GCAATG	2 cut(s)	504, 698
BsrFI	RCCGGY	3 cut(s)	276, 436, 445
BsrI	ACTGG	4 cut(s)	928, 939, 1394, 1408
BssAI	RCCGGY	3 cut(s)	276, 436, 445
BssECI	CCNNGG	4 cut(s)	225, 345, 513, 757
BssMI	GATC	4 cut(s)	311, 901, 1093, 1237
BssNI	GRCGYC	1 cut(s)	360
BssT1I	CCWWGG	2 cut(s)	513, 757
Bst2UI	CCWGG	2 cut(s)	227, 1155
Bst4CI	ACNGT	4 cut(s)	430, 850, 1061, 1189
Bst6I	CTCTTC	1 cut(s)	119
BstACI	GRCGYC	1 cut(s)	360
BstBAI	YACGTR	2 cut(s)	214, 237
BstBI	TTCGAA	1 cut(s)	1077
BstC8I	GCNNGC	9 cut(s)	244, 404, 438, 508, 648, 948, 1047, 1194, 1384
BstDEI	CTNAG	4 cut(s)	288, 294, 573, 1167
BstDSI	CCRYGG	1 cut(s)	757
BstEII	GGTNACC	2 cut(s)	448, 594
BstF5I	GGATG	3 cut(s)	153, 191, 901
BstFNI	CGCG	1 cut(s)	1207
BstKTI	GATC	4 cut(s)	314, 904, 1096, 1240
BstMAI	GTCTC	3 cut(s)	291, 297, 688
BstMBI	GATC	4 cut(s)	311, 901, 1093, 1237
BstMCI	CGRYCG	1 cut(s)	303
BstMWI	GCNNNNNNNGC	6 cut(s)	350, 359, 503, 956, 965, 1289
BstNI	CCWGG	2 cut(s)	227, 1155
BstNSI	RCATGY	1 cut(s)	950
BstPI	GGTNACC	2 cut(s)	448, 594
BstSCI	CCNGG	3 cut(s)	225, 1153, 1339
BstSFI	CTRYAG	2 cut(s)	167, 354
BstSLI	GKGCMC	1 cut(s)	244
BstUI	CGCG	1 cut(s)	1207
BstV1I	GCAGC	4 cut(s)	181, 946, 949, 952
BstX2I	RGATCY	1 cut(s)	1237
BstYI	RGATCY	1 cut(s)	1237
BsuRI	GGCC	5 cut(s)	230, 344, 710, 1163, 1350
BtgI	CCRYGG	1 cut(s)	757
BtgZI	GCGATG	1 cut(s)	421
BtsCI	GGATG	3 cut(s)	153, 191, 901
BtsI	GCAGTG	1 cut(s)	990
BtsIMutI	CAGTG	6 cut(s)	318, 921, 932, 990, 1194, 1387
Cac8I	GCNNGC	9 cut(s)	244, 404, 438, 508, 648, 948, 1047, 1194, 1384
Cfr10I	RCCGGY	3 cut(s)	276, 436, 445
Cfr13I	GGNCC	3 cut(s)	229, 279, 305
CseI	GACGC	2 cut(s)	368, 1196
Csp6I	GTAC	2 cut(s)	65, 669
CspAI	ACCGGT	2 cut(s)	276, 445
CviAII	CATG	5 cut(s)	616, 758, 810, 947, 951
CviQI	GTAC	2 cut(s)	65, 669
DdeI	CTNAG	4 cut(s)	288, 294, 573, 1167
DpnI	GATC	4 cut(s)	313, 903, 1095, 1239
DpnII	GATC	4 cut(s)	311, 901, 1093, 1237
DraI	TTTAAA	1 cut(s)	1224
DraIII	CACNNNGTG	1 cut(s)	1310
EaeI	YGGCCR	2 cut(s)	342, 1348
Eam1104I	CTCTTC	1 cut(s)	119
EarI	CTCTTC	1 cut(s)	119
Eco130I	CCWWGG	2 cut(s)	513, 757
Eco147I	AGGCCT	1 cut(s)	710
Eco24I	GRGCYC	1 cut(s)	1341
Eco31I	GGTCTC	1 cut(s)	688
Eco47I	GGWCC	2 cut(s)	279, 305
Eco57I	CTGAAG	1 cut(s)	472
Eco72I	CACGTG	2 cut(s)	214, 237
Eco88I	CYCGRG	1 cut(s)	1050
Eco91I	GGTNACC	2 cut(s)	448, 594
EcoO65I	GGTNACC	2 cut(s)	448, 594
EcoRII	CCWGG	2 cut(s)	225, 1153
EcoT14I	CCWWGG	2 cut(s)	513, 757
EcoT22I	ATGCAT	2 cut(s)	948, 952
EcoT38I	GRGCYC	1 cut(s)	1341
ErhI	CCWWGG	2 cut(s)	513, 757
FaeI	CATG	5 cut(s)	619, 761, 813, 950, 954
FaqI	GGGAC	3 cut(s)	265, 869, 977
FatI	CATG	5 cut(s)	615, 757, 809, 946, 950
FauI	CCCGC	3 cut(s)	216, 258, 983
FblI	GTMKAC	2 cut(s)	299, 357
Fnu4HI	GCNGC	4 cut(s)	170, 960, 963, 966
FokI	GGATG	3 cut(s)	140, 178, 908
FriOI	GRGCYC	1 cut(s)	1341
Fsp4HI	GCNGC	4 cut(s)	170, 960, 963, 966
FspBI	CTAG	3 cut(s)	329, 909, 914
GluI	GCNGC	4 cut(s)	170, 960, 963, 966
GsuI	CTGGAG	2 cut(s)	1137, 1391
HaeIII	GGCC	5 cut(s)	230, 344, 710, 1163, 1350
HapII	CCGG	5 cut(s)	277, 303, 437, 446, 1341
HgaI	GACGC	2 cut(s)	368, 1196
Hin1I	GRCGYC	1 cut(s)	360
Hin1II	CATG	5 cut(s)	619, 761, 813, 950, 954
HincII	GTYRAC	2 cut(s)	300, 426
HindII	GTYRAC	2 cut(s)	300, 426
HindIII	AAGCTT	2 cut(s)	368, 484
HinfI	GANTC	5 cut(s)	390, 746, 918, 929, 1175
HpaI	GTTAAC	1 cut(s)	426
HpaII	CCGG	5 cut(s)	277, 303, 437, 446, 1341
HphI	GGTGA	4 cut(s)	180, 460, 773, 938
Hpy166II	GTNNAC	6 cut(s)	300, 358, 426, 764, 1057, 1250
Hpy188I	TCNGA	1 cut(s)	379
Hpy188III	TCNNGA	2 cut(s)	394, 467
Hpy8I	GTNNAC	6 cut(s)	300, 358, 426, 764, 1057, 1250
HpyAV	CCTTC	2 cut(s)	613, 1126
HpyCH4III	ACNGT	4 cut(s)	430, 850, 1061, 1189
HpyCH4IV	ACGT	3 cut(s)	213, 236, 766
HpyCH4V	TGCA	8 cut(s)	169, 664, 946, 950, 983, 1202, 1232, 1304
HpyF10VI	GCNNNNNNNGC	6 cut(s)	350, 359, 503, 956, 965, 1289
HpyF3I	CTNAG	4 cut(s)	288, 294, 573, 1167
HpySE526I	ACGT	3 cut(s)	213, 236, 766
Hsp92I	GRCGYC	1 cut(s)	360
Hsp92II	CATG	5 cut(s)	619, 761, 813, 950, 954
KroI	GCCGGC	1 cut(s)	436
KroNI	GCCGGC	1 cut(s)	438
KspAI	GTTAAC	1 cut(s)	426
Kzo9I	GATC	4 cut(s)	311, 901, 1093, 1237
LmnI	GCTCC	3 cut(s)	251, 433, 1156
Lsp1109I	GCAGC	4 cut(s)	181, 946, 949, 952
LweI	GCATC	3 cut(s)	784, 1291, 1353
MaeI	CTAG	3 cut(s)	329, 909, 914
MaeII	ACGT	3 cut(s)	213, 236, 766
MaeIII	GTNAC	3 cut(s)	331, 448, 594
MalI	GATC	4 cut(s)	313, 903, 1095, 1239
MbiI	CCGCTC	1 cut(s)	1364
MboI	GATC	4 cut(s)	311, 901, 1093, 1237
MboII	GAAGA	6 cut(s)	106, 152, 635, 1091, 1247, 1310
MflI	RGATCY	1 cut(s)	1237
MhlI	GDGCHC	4 cut(s)	134, 244, 1285, 1341
MluCI	AATT	7 cut(s)	37, 567, 866, 999, 1089, 1319, 1400
MlyI	GAGTC	1 cut(s)	399
Mph1103I	ATGCAT	2 cut(s)	948, 952
MroNI	GCCGGC	1 cut(s)	436
MseI	TTAA	5 cut(s)	425, 534, 1223, 1323, 1328
MspI	CCGG	5 cut(s)	277, 303, 437, 446, 1341
MspR9I	CCNGG	3 cut(s)	227, 1155, 1341
MvaI	CCWGG	2 cut(s)	227, 1155
MvnI	CGCG	1 cut(s)	1207
MwoI	GCNNNNNNNGC	6 cut(s)	350, 359, 503, 956, 965, 1289
NaeI	GCCGGC	1 cut(s)	438
NciI	CCSGG	1 cut(s)	1341
NcoI	CCATGG	1 cut(s)	757
NdeII	GATC	4 cut(s)	311, 901, 1093, 1237
NgoMIV	GCCGGC	1 cut(s)	436
NlaIII	CATG	5 cut(s)	619, 761, 813, 950, 954
NlaIV	GGNNCC	3 cut(s)	281, 307, 435
NmeAIII	GCCGAG	1 cut(s)	370
NmuCI	GTSAC	1 cut(s)	448
NsiI	ATGCAT	2 cut(s)	948, 952
NspI	RCATGY	1 cut(s)	950
NspV	TTCGAA	1 cut(s)	1077
PaeI	GCATGC	1 cut(s)	950
PaeR7I	CTCGAG	1 cut(s)	1050
PceI	AGGCCT	1 cut(s)	710
PdiI	GCCGGC	1 cut(s)	438
PfeI	GAWTC	4 cut(s)	746, 918, 929, 1175
PflMI	CCANNNNNTGG	1 cut(s)	1256
PinAI	ACCGGT	2 cut(s)	276, 445
PkrI	GCNGC	4 cut(s)	171, 961, 964, 967
PleI	GAGTC	1 cut(s)	398
PmaCI	CACGTG	2 cut(s)	214, 237
PmlI	CACGTG	2 cut(s)	214, 237
PpsI	GAGTC	1 cut(s)	398
Ppu21I	YACGTR	2 cut(s)	214, 237
PsiI	TTATAA	1 cut(s)	86
Psp6I	CCWGG	2 cut(s)	225, 1153
PspCI	CACGTG	2 cut(s)	214, 237
PspEI	GGTNACC	2 cut(s)	448, 594
PspGI	CCWGG	2 cut(s)	225, 1153
PspN4I	GGNNCC	3 cut(s)	281, 307, 435
PspPI	GGNCC	3 cut(s)	229, 279, 305
PspXI	VCTCGAGB	1 cut(s)	1050
PstI	CTGCAG	1 cut(s)	171
PsuI	RGATCY	1 cut(s)	1237
RsaI	GTAC	2 cut(s)	66, 670
RsaNI	GTAC	2 cut(s)	65, 669
SalI	GTCGAC	1 cut(s)	298
SaqAI	TTAA	5 cut(s)	425, 534, 1223, 1323, 1328
SatI	GCNGC	4 cut(s)	170, 960, 963, 966
Sau3AI	GATC	4 cut(s)	311, 901, 1093, 1237
Sau96I	GGNCC	3 cut(s)	229, 279, 305
ScaI	AGTACT	2 cut(s)	66, 670
SchI	GAGTC	1 cut(s)	399
ScrFI	CCNGG	3 cut(s)	227, 1155, 1341
SduI	GDGCHC	4 cut(s)	134, 244, 1285, 1341
SfaNI	GCATC	3 cut(s)	784, 1291, 1353
SfcI	CTRYAG	2 cut(s)	167, 354
Sfr274I	CTCGAG	1 cut(s)	1050
SfuI	TTCGAA	1 cut(s)	1077
SinI	GGWCC	2 cut(s)	279, 305
SlaI	CTCGAG	1 cut(s)	1050
SmlI	CTYRAG	3 cut(s)	704, 1050, 1286
SmoI	CTYRAG	3 cut(s)	704, 1050, 1286
SphI	GCATGC	1 cut(s)	950
Sse9I	AATT	7 cut(s)	37, 567, 866, 999, 1089, 1319, 1400
SseBI	AGGCCT	1 cut(s)	710
SsiI	CCGC	5 cut(s)	209, 251, 976, 1205, 1362
SspI	AATATT	1 cut(s)	261
SspMI	CTAG	3 cut(s)	329, 909, 914
StuI	AGGCCT	1 cut(s)	710
StyD4I	CCNGG	3 cut(s)	225, 1153, 1339
StyI	CCWWGG	2 cut(s)	513, 757
TaaI	ACNGT	4 cut(s)	430, 850, 1061, 1189
TaiI	ACGT	3 cut(s)	216, 239, 769
TaqI	TCGA	5 cut(s)	299, 1018, 1051, 1077, 1243
TasI	AATT	7 cut(s)	37, 567, 866, 999, 1089, 1319, 1400
TatI	WGTACW	2 cut(s)	64, 668
TfiI	GAWTC	4 cut(s)	746, 918, 929, 1175
Tru1I	TTAA	5 cut(s)	425, 534, 1223, 1323, 1328
Tru9I	TTAA	5 cut(s)	425, 534, 1223, 1323, 1328
TscAI	CASTG	6 cut(s)	325, 928, 939, 990, 1194, 1394
TseFI	GTSAC	1 cut(s)	448
TseI	GCWGC	4 cut(s)	169, 959, 962, 965
Tsp45I	GTSAC	1 cut(s)	448
TspDTI	ATGAA	3 cut(s)	515, 632, 1311
TspGWI	ACGGA	1 cut(s)	411
TspRI	CASTG	6 cut(s)	325, 928, 939, 990, 1194, 1394
Van91I	CCANNNNNTGG	1 cut(s)	1256
VpaK11BI	GGWCC	2 cut(s)	279, 305
XapI	RAATTY	2 cut(s)	1319, 1400
XceI	RCATGY	1 cut(s)	950
XhoI	CTCGAG	1 cut(s)	1050
XmiI	GTMKAC	2 cut(s)	299, 357
XspI	CTAG	3 cut(s)	329, 909, 914
ZrmI	AGTACT	2 cut(s)	66, 670
Zsp2I	ATGCAT	2 cut(s)	948, 952

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.