Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr14

Orthogroup ID

OG0005458

Physical Location & Seq

Genomic Coordinates Reverse (-)

19537627 .. 19541798

Gene Structure 4172 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom14g17690.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3180 bp

ATGGCTGCAAAACTTCTGCATTCCTTAGCTGATGACAATCCAGATTTGCAGAAGCAAATAGGATGTATGAATGGGATTCTTCAGCTTTTTGACCGGCAACATGCTCTCACCGGTAGGCGGGTTGGCCACCACAAGAGGCTTCCTTCAGGGAATTCCCATTTCAGCAATGGTGGCCCGGAAAGAGAGTATAATAATGCATACCATCGTCAGACAGCACCTGAAATGAATTTGAACAAGAGTGAGAATGAGACAAAAAGACTCTCAGCAGAATCGTCAAGAGCCTCTTTCTCATCCGTTTCTTCTTCCTTGTCATCTCTGGACTACAACAAAACAGCTCAACCTGGAACATCTTCCTTTGACAGAAGCATTTTTGCTGAAACTCCACCAAGGGATCTGACAAACCAATCAAGTATGTCCCCCAAACTAGGGATGCAATCCCTTGATCTCCGGGCCATGGTGAAGGATTCTATGCATAGGGAAATTAGGGCACTATCAGTTAAAACTACAACCAAAGAGGAATCTGCAGGTCATGCAGTGAAGCATAGAGACTCTCCAAGACCCTTACAGTTGTCCGAATCAGTGGAAGGATCAATTGAAGTTGGGATCTATGGGAAGCAAAATGTGCCTGCTGACCTCAGGGAGTCTCTTCGAGTTCTTGCTAAACTCCAAGAAGCACCGTGGAGTAATGATGATGCTAGAGATCATCCAAGATCATCATATGAATTGAAAGATAGTTCCTGGAACACACTTACAAAGGACGCTCCACGTTTTTCTTATGATGGGAAAGAGAGAAATCGTTTGTCTTTGGATTCAAGAGATGCCTTCAAAGCAACCCCAAAGCTAAAAGAGTTGCCAAGACTTTCGCTGGACGGTAGAGAAGGTTCAATGCGGAATTCCACATCTGATTCAAAATCATATCAGCGTTCGAAAAGTTTTCAGAATAGTGGAAACTCAAATGACAGATACCATAATCTACCTCAGTTGTCCCGAAGTCATAATCGACCTCCTAGTGTAGTGGCAAAGTTGATGGGTTTGGAAGCCTTGCCAGATTCTGCCTCGACTAGTGATAGTCACTTGATTGAAACCAGCCCGGTTAAAGTTATTGATCCTTTCTCAAAACCACTGAAGCTAAATAATCTGCAGAGGCCTATGCCTATGAGAATTTCTAATACCACAAGAAATTCTCTGAAAGAACCATCATCACCACGGTGGAAAAATCCAGATTTGGTTATGAGGCCTATTTCAAGTTCAAGGTTTCCAATTGAGCCAGCCCCATGGAAAATGCAGGATGGAAGTCGAGGTTCTCAGAAACCATCTTCCAAACCTGTAAAAGTTCAAGCAAGGACTTCAGACTCCTTCCCTTCTGTTTATAGTGAGATTGAGAAGAGGTTGAAAGATCTGGAATTTAAACAATCCGGGAAGGACCTCAGAGCCCTTAAACAGATACTCGAAGCAATGCAAGCAAAAGGTCTTTTAGAGACCAAAAATGAAGAACAAGCTTCAAACTTTGGAACTCAAAAAGACAGTGAATCCAAATGTACAAGTTCCAATCTGAATTCGAAATCAACAAACCAGCGAAACACAAGCAACCATGTTGTTGCTTCCACAAGTACAGGTGCTGCTTTCTCTGGGTCTTTTGAGTCCCCGATTGTGATCATGAAACCTGCAAAACTTGTTGAAAAATCTGGTATTCCCACTTCATCATTAATTTCAGTAGATGGCCTCTCTGATGCCCGTACTCTTCAGAGAAGGAGAAGTACAGATAATAAGACGGGTTCAACTAGCAGTCGGACAGTTAAAGATCAGCATCCTAAAAACAGTTGGAAGGAATCTGCTGTCAGTCCCACTGACAAAAAAACAAGTGGCAGGAATATAAGATCAACACAATCTCTGCCAAAGGATACCGCTGGATCAAGTTCAGTAAAGAGCTCAGGATCTGTGAGTCCAAGACTACAACAGAAGAAACTTGAGTTGGCAAAGTCATCTCGTCCACCTACCCCTCCATCTGATTCAAAAAAATCCAGAAGGCAGTCCAGCAGGCAATTGACAGAGTCAGGTTCGCCGGGTGGAAAACTCAGACCAAAATCTTCCAACTTGCAGCAAAGTGATGACCAGTTGAGTGAGATAAGTAATGAATCTAGAAGTTTGAGTTTTGAAGGAGATGACCTCGATATGGAAGTCAATAGTATTGTACGAGCTACTGAGATAAATGGCAGCCAGAGTCCATGTTTGAGAGCTGCCAAGCCTTTGGCTTCTGGTTCAATGCAGCAAAAATCAAGTCCAAGGTTGGAAGAATATGGATCTGTTGCTGAACTTGCTATAGTTGGTCCAGAACAACCTAGTCCTGTGTCTGTTCTTGATAACTCGGCATACAGAGATGATGCACCATCACCCGTAAAGCAGATGCCGAATGCCCTCCAAGGCAATAGTGCCGAAGATTCCAAGCACGGCGAAGGTGAAGATCAATGGAACCCTGCAGATAAGCTTGACAGCATGGGATCTGGTCTTACATCAGAAATCAATCGCATGAAATTGAAGAACATTGAAAACTTAGTTCAGAAGCTTAGACGATTGAATTCTAATCATGATGAAGCGAGAACAGACTATATTGCATCGCTCTGCGAGAACACAAATCCAGACCACAGATACATTTCTGAGATATTGTTAACTTCAGGCCTCCTACTCAGAGACCTCGGCTCCAGCTTGACAACATTTCAGCTCCATCCCTCAGGCCATCCCATCAACCCCGAGCTATTCTATGTTTTGGAGCAAACCAAGGCAAGCAGTTTGCTTGCAAAAGAGGAATGCATCCCCGAAAAGGTAACCATTGCGGTACAAGAGAGAGAGAAATTTCATCGGAAACTCATATTCGATGCAGTCAGTGAAATTCTTGTTGACAAGTTGAATTTAGTCGGTATCCCTCCCGTGCCATGGTTGAAGCCTGACAAGCTCGCAAAGAAGACCCTCAACGCGCAAAAGCTTCTGAAGGAACTGTCTAGCGATATAGAACAATTGCAAGCCAAGAAACCAGAGTGCAGCTTAGAGGACGAGGGTGATGGTTTGAAAAACATCTTGTGGGAGGATGTGATGCACCGGTCAGAAAGCTGGACAATTTTCCATGGTGACATCTCCGGTGTAGTGTTAGACGTCGAACGGTTGATCTATCAAGGATCTGGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF4378 VARLMGL

Protein Analysis

1060

Amino Acids

117.1

Weight (kDa)

9.23

Isoelectric Point (pI)

61.06

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005458)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G18620 AT1G18620 AT1G18620 AT1G18620 AT1G18620 AT1G74160 AT1G74160 AT1G74160
fragaria_vesca	FvH4_5g13690 FvH4_5g13690 FvH4_5g13690
malus_domestica	MD06G1203000.v1.1 MD14G1213600.v1.1
prunus_persica	Prupe.5G206500_v2.0.a1
pyrus_communis	pycom06g18080 pycom14g17690
rosa_chinensis	RchiOBHm_Chr7g0183251
rosa_laevigata	RLG00000005062
rosa_multiflora	Rmu_co8293079.1_g000001 Rmu_co8448119.1_g000001 Rmu_sc0008744.1_g000012
rosa_roxburghii	Rroxscaffold_3G00270620
rosa_rugosa	Rorug06G0455500 Rorug06G0455600
rosa_samantha	Rh7AG057500 Rh7BG057400 Rh7CG059000 Rh7DG057200
rosa_wichuraiana	Rw7G004710

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	3150
Acc36I	ACCTGC	2 cut(s)	515, 1672
AccII	CGCG	1 cut(s)	2972
AciI	CCGC	4 cut(s)	118, 889, 1905, 2831
AclWI	GGATC	9 cut(s)	399, 595, 611, 1100, 1918, 1942, 2308, 2506, 3178
AcoI	YGGCCR	1 cut(s)	124
AcuI	CTGAAG	7 cut(s)	65, 129, 1145, 1332, 1727, 2655, 3005
AcyI	GRCGYC	1 cut(s)	3147
AfaI	GTAC	6 cut(s)	1540, 1612, 1738, 1759, 2193, 2835
AfiI	CCNNNNNNNGG	7 cut(s)	117, 425, 426, 454, 2173, 2818, 2931
AgeI	ACCGGT	2 cut(s)	110, 3093
AhlI	ACTAGT	1 cut(s)	1061
AjnI	CCWGG	2 cut(s)	340, 737
AjuI	GAANNNNNNNTTGG	2 cut(s)	1955, 1987
AleI	CACNNNNGTG	1 cut(s)	1207
Alw21I	GWGCWC	1 cut(s)	1931
Alw26I	GTCTC	5 cut(s)	242, 540, 648, 1472, 2682
AlwI	GGATC	9 cut(s)	399, 595, 611, 1100, 1918, 1942, 2308, 2506, 3178
AlwNI	CAGNNNCTG	4 cut(s)	218, 1052, 1619, 1937
Ama87I	CYCGRG	1 cut(s)	2747
AoxI	GGCC	8 cut(s)	124, 172, 450, 1145, 1235, 1720, 2674, 2731
ApeKI	GCWGC	7 cut(s)	5, 1619, 2098, 2214, 2237, 2266, 3036
ArsI	GACNNNNNNTTYG	2 cut(s)	2263, 2295
AseI	ATTAAT	1 cut(s)	1706
AsiGI	ACCGGT	2 cut(s)	110, 3093
Asp700I	GAANNNNTTC	1 cut(s)	349
AspLEI	GCGC	1 cut(s)	2974
AspS9I	GGNCC	4 cut(s)	173, 450, 1423, 2327
AsuC2I	CCSGG	5 cut(s)	176, 449, 1091, 1417, 2064
AsuHPI	GGTGA	7 cut(s)	100, 469, 1194, 2382, 2468, 3065, 3134
AsuII	TTCGAA	2 cut(s)	926, 1559
AvaI	CYCGRG	1 cut(s)	2747
AvaII	GGWCC	2 cut(s)	1423, 2327
AxyI	CCTNAGG	2 cut(s)	635, 2728
BaeGI	GKGCMC	1 cut(s)	490
BalI	TGGCCA	1 cut(s)	126
BanII	GRGCYC	2 cut(s)	1435, 1931
BarI	GAAGNNNNNNTAC	4 cut(s)	1681, 1713, 1741, 1773
BbsI	GAAGAC	1 cut(s)	2966
Bbv12I	GWGCWC	1 cut(s)	1931
BbvI	GCAGC	6 cut(s)	1606, 2110, 2224, 2226, 2278, 3048
BceAI	ACGGC	1 cut(s)	2464
BciT130I	CCWGG	2 cut(s)	342, 739
BciVI	GTATCC	2 cut(s)	1894, 2927
BclI	TGATCA	1 cut(s)	1653
BcnI	CCSGG	5 cut(s)	176, 449, 1091, 1417, 2064
BcoDI	GTCTC	5 cut(s)	242, 540, 648, 1472, 2682
BcuI	ACTAGT	1 cut(s)	1061
BfaI	CTAG	8 cut(s)	425, 696, 1008, 1062, 1782, 2139, 2340, 2997
BfmI	CTRYAG	4 cut(s)	522, 1139, 2319, 2475
BfuAI	ACCTGC	2 cut(s)	515, 1672
BfuI	GTATCC	2 cut(s)	1894, 2927
BglII	AGATCT	1 cut(s)	1396
BisI	GCNGC	7 cut(s)	6, 1620, 2099, 2215, 2238, 2267, 3037
BlsI	GCNGC	7 cut(s)	7, 1621, 2100, 2216, 2239, 2268, 3038
Bme1390I	CCNGG	7 cut(s)	176, 342, 449, 739, 1091, 1417, 2064
Bme18I	GGWCC	2 cut(s)	1423, 2327
BmeT110I	CYCGRG	1 cut(s)	2747
BmgT120I	GGNCC	4 cut(s)	173, 450, 1423, 2327
BmiI	GGNNCC	2 cut(s)	2471, 2698
BmrFI	CCNGG	7 cut(s)	176, 342, 449, 739, 1091, 1417, 2064
BpiI	GAAGAC	1 cut(s)	2966
BplI	GAGNNNNNCTC	2 cut(s)	2151, 2183
BpmI	CTGGAG	1 cut(s)	2683
Bpu10I	CCTNAGC	2 cut(s)	25, 1930
Bpu14I	TTCGAA	2 cut(s)	926, 1559
BpuEI	CTTGAG	1 cut(s)	1988
BpuMI	CCSGG	5 cut(s)	176, 449, 1091, 1417, 2064
BsaBI	GATNNNNATC	3 cut(s)	36, 1652, 1806
BsaHI	GRCGYC	1 cut(s)	3147
BsaI	GGTCTC	2 cut(s)	1472, 2682
BsaWI	WCCGGW	3 cut(s)	110, 3093, 3131
BsaXI	ACNNNNNCTCC	2 cut(s)	2681, 2711
Bsc4I	CCNNNNNNNGG	7 cut(s)	117, 425, 426, 454, 2173, 2818, 2931
Bse118I	RCCGGY	3 cut(s)	93, 110, 3093
Bse1I	ACTGG	1 cut(s)	2113
Bse21I	CCTNAGG	2 cut(s)	635, 2728
Bse3DI	GCAATG	3 cut(s)	172, 1461, 2826
Bse8I	GATNNNNATC	3 cut(s)	36, 1652, 1806
BseBI	CCWGG	2 cut(s)	342, 739
BseJI	GATNNNNATC	3 cut(s)	36, 1652, 1806
BseLI	CCNNNNNNNGG	7 cut(s)	117, 425, 426, 454, 2173, 2818, 2931
BseMI	GCAATG	3 cut(s)	172, 1461, 2826
BseNI	ACTGG	1 cut(s)	2113
BseSI	GKGCMC	1 cut(s)	490
BseXI	GCAGC	6 cut(s)	1606, 2110, 2224, 2226, 2278, 3048
BsgI	GTGCAG	1 cut(s)	3055
Bsh1236I	CGCG	1 cut(s)	2972
BshFI	GGCC	8 cut(s)	126, 174, 452, 1147, 1237, 1722, 2676, 2733
BshTI	ACCGGT	2 cut(s)	110, 3093
BsiHKAI	GWGCWC	1 cut(s)	1931
BsiHKCI	CYCGRG	1 cut(s)	2747
BsiSI	CCGG	9 cut(s)	94, 111, 176, 448, 1091, 1416, 2063, 3094, 3132
BslFI	GGGAC	4 cut(s)	400, 970, 1627, 1827
BslI	CCNNNNNNNGG	7 cut(s)	117, 425, 426, 454, 2173, 2818, 2931
BsmAI	GTCTC	5 cut(s)	242, 540, 648, 1472, 2682
BsmFI	GGGAC	4 cut(s)	400, 970, 1627, 1827
BsmI	GAATGC	3 cut(s)	19, 2416, 2810
BsnI	GGCC	8 cut(s)	126, 174, 452, 1147, 1237, 1722, 2676, 2733
Bso31I	GGTCTC	2 cut(s)	1472, 2682
BsoBI	CYCGRG	1 cut(s)	2747
Bsp119I	TTCGAA	2 cut(s)	926, 1559
Bsp1286I	GDGCHC	3 cut(s)	490, 1435, 1931
Bsp1407I	TGTACA	1 cut(s)	1538
Bsp19I	CCATGG	4 cut(s)	453, 1274, 2930, 3118
BspACI	CCGC	4 cut(s)	118, 889, 1905, 2831
BspANI	GGCC	8 cut(s)	126, 174, 452, 1147, 1237, 1722, 2676, 2733
BspFNI	CGCG	1 cut(s)	2972
BspHI	TCATGA	2 cut(s)	1656, 2584
BspLI	GGNNCC	2 cut(s)	2471, 2698
BspMAI	CTGCAG	3 cut(s)	526, 1143, 2479
BspMI	ACCTGC	2 cut(s)	515, 1672
BspPI	GGATC	9 cut(s)	399, 595, 611, 1100, 1918, 1942, 2308, 2506, 3178
BspT104I	TTCGAA	2 cut(s)	926, 1559
BspTNI	GGTCTC	2 cut(s)	1472, 2682
BsrDI	GCAATG	3 cut(s)	172, 1461, 2826
BsrFI	RCCGGY	3 cut(s)	93, 110, 3093
BsrGI	TGTACA	1 cut(s)	1538
BsrI	ACTGG	1 cut(s)	2113
BssAI	RCCGGY	3 cut(s)	93, 110, 3093
BssNI	GRCGYC	1 cut(s)	3147
BssT1I	CCWWGG	8 cut(s)	386, 453, 1274, 2282, 2419, 2775, 2930, 3118
Bst2UI	CCWGG	2 cut(s)	342, 739
Bst4CI	ACNGT	9 cut(s)	567, 678, 872, 1209, 1526, 1795, 1820, 2994, 3156
Bst6I	CTCTTC	3 cut(s)	651, 1379, 1746
BstACI	GRCGYC	1 cut(s)	3147
BstAPI	GCANNNNNTGC	2 cut(s)	530, 622
BstAUI	TGTACA	1 cut(s)	1538
BstBI	TTCGAA	2 cut(s)	926, 1559
BstC8I	GCNNGC	8 cut(s)	627, 1269, 1461, 2039, 2782, 2793, 2952, 3018
BstDSI	CCRYGG	6 cut(s)	453, 677, 1205, 1274, 2930, 3118
BstEII	GGTNACC	1 cut(s)	2821
BstFNI	CGCG	1 cut(s)	2972
BstHHI	GCGC	1 cut(s)	2974
BstMAI	GTCTC	5 cut(s)	242, 540, 648, 1472, 2682
BstMWI	GCNNNNNNNGC	7 cut(s)	171, 530, 622, 827, 1460, 2315, 2947
BstNI	CCWGG	2 cut(s)	342, 739
BstNSI	RCATGY	1 cut(s)	104
BstPI	GGTNACC	1 cut(s)	2821
BstSCI	CCNGG	7 cut(s)	174, 340, 447, 737, 1089, 1415, 2062
BstSFI	CTRYAG	4 cut(s)	522, 1139, 2319, 2475
BstSLI	GKGCMC	1 cut(s)	490
BstUI	CGCG	1 cut(s)	2972
BstV1I	GCAGC	6 cut(s)	1606, 2110, 2224, 2226, 2278, 3048
BstV2I	GAAGAC	1 cut(s)	2966
BstX2I	RGATCY	7 cut(s)	391, 603, 1396, 1934, 2300, 2498, 3170
BstXI	CCANNNNNNTGG	2 cut(s)	1275, 2248
BstYI	RGATCY	7 cut(s)	391, 603, 1396, 1934, 2300, 2498, 3170
Bsu36I	CCTNAGG	2 cut(s)	635, 2728
BsuI	GTATCC	2 cut(s)	1894, 2927
BsuRI	GGCC	8 cut(s)	126, 174, 452, 1147, 1237, 1722, 2676, 2733
BtgI	CCRYGG	6 cut(s)	453, 677, 1205, 1274, 2930, 3118
BtgZI	GCGATG	1 cut(s)	2598
BtsI	GCAGTG	1 cut(s)	540
BtsIMutI	CAGTG	6 cut(s)	540, 585, 1121, 1531, 1845, 2887
BveI	ACCTGC	2 cut(s)	515, 1672
Cac8I	GCNNGC	8 cut(s)	627, 1269, 1461, 2039, 2782, 2793, 2952, 3018
CaiI	CAGNNNCTG	4 cut(s)	218, 1052, 1619, 1937
CciI	TCATGA	2 cut(s)	1656, 2584
CfoI	GCGC	1 cut(s)	2974
Cfr10I	RCCGGY	3 cut(s)	93, 110, 3093
Cfr13I	GGNCC	4 cut(s)	173, 450, 1423, 2327
CseI	GACGC	1 cut(s)	767
Csp6I	GTAC	6 cut(s)	1539, 1611, 1737, 1758, 2192, 2834
CspAI	ACCGGT	2 cut(s)	110, 3093
CviQI	GTAC	6 cut(s)	1539, 1611, 1737, 1758, 2192, 2834
DraI	TTTAAA	1 cut(s)	1408
EaeI	YGGCCR	1 cut(s)	124
Eam1104I	CTCTTC	3 cut(s)	651, 1379, 1746
EarI	CTCTTC	3 cut(s)	651, 1379, 1746
Ecl136II	GAGCTC	1 cut(s)	1929
Eco130I	CCWWGG	8 cut(s)	386, 453, 1274, 2282, 2419, 2775, 2930, 3118
Eco147I	AGGCCT	3 cut(s)	1147, 1237, 2676
Eco24I	GRGCYC	2 cut(s)	1435, 1931
Eco31I	GGTCTC	2 cut(s)	1472, 2682
Eco47I	GGWCC	2 cut(s)	1423, 2327
Eco53kI	GAGCTC	1 cut(s)	1929
Eco57I	CTGAAG	7 cut(s)	65, 129, 1145, 1332, 1727, 2655, 3005
Eco81I	CCTNAGG	2 cut(s)	635, 2728
Eco88I	CYCGRG	1 cut(s)	2747
Eco91I	GGTNACC	1 cut(s)	2821
EcoICRI	GAGCTC	1 cut(s)	1929
EcoO109I	RGGNCCY	1 cut(s)	1423
EcoO65I	GGTNACC	1 cut(s)	2821
EcoRI	GAATTC	4 cut(s)	151, 892, 1555, 2575
EcoRII	CCWGG	2 cut(s)	340, 737
EcoT14I	CCWWGG	8 cut(s)	386, 453, 1274, 2282, 2419, 2775, 2930, 3118
EcoT22I	ATGCAT	3 cut(s)	199, 474, 2810
EcoT38I	GRGCYC	2 cut(s)	1435, 1931
ErhI	CCWWGG	8 cut(s)	386, 453, 1274, 2282, 2419, 2775, 2930, 3118
FalI	AAGNNNNNCTT	2 cut(s)	268, 300
FaqI	GGGAC	4 cut(s)	400, 970, 1627, 1827
FauI	CCCGC	1 cut(s)	111
FauNDI	CATATG	1 cut(s)	718
FbaI	TGATCA	1 cut(s)	1653
Fnu4HI	GCNGC	7 cut(s)	6, 1620, 2099, 2215, 2238, 2267, 3037
FriOI	GRGCYC	2 cut(s)	1435, 1931
Fsp4HI	GCNGC	7 cut(s)	6, 1620, 2099, 2215, 2238, 2267, 3037
FspBI	CTAG	8 cut(s)	425, 696, 1008, 1062, 1782, 2139, 2340, 2997
GlaI	GCGC	1 cut(s)	2973
GluI	GCNGC	7 cut(s)	6, 1620, 2099, 2215, 2238, 2267, 3037
GsuI	CTGGAG	1 cut(s)	2683
HaeIII	GGCC	8 cut(s)	126, 174, 452, 1147, 1237, 1722, 2676, 2733
HapII	CCGG	9 cut(s)	94, 111, 176, 448, 1091, 1416, 2063, 3094, 3132
HgaI	GACGC	1 cut(s)	767
HhaI	GCGC	1 cut(s)	2974
Hin1I	GRCGYC	1 cut(s)	3147
Hin6I	GCGC	1 cut(s)	2972
HinP1I	GCGC	1 cut(s)	2972
HincII	GTYRAC	2 cut(s)	2667, 2896
HindII	GTYRAC	2 cut(s)	2667, 2896
HindIII	AAGCTT	4 cut(s)	1497, 2483, 2561, 2978
HpaI	GTTAAC	1 cut(s)	2667
HpaII	CCGG	9 cut(s)	94, 111, 176, 448, 1091, 1416, 2063, 3094, 3132
HphI	GGTGA	7 cut(s)	100, 469, 1194, 2382, 2468, 3065, 3134
Hpy166II	GTNNAC	3 cut(s)	1991, 2667, 2896
Hpy8I	GTNNAC	3 cut(s)	1991, 2667, 2896
Hpy99I	CGWCG	1 cut(s)	3152
HpyCH4III	ACNGT	9 cut(s)	567, 678, 872, 1209, 1526, 1795, 1820, 2994, 3156
HpyCH4IV	ACGT	2 cut(s)	766, 3147
HpyF10VI	GCNNNNNNNGC	7 cut(s)	171, 530, 622, 827, 1460, 2315, 2947
HpySE526I	ACGT	2 cut(s)	766, 3147
Hsp92I	GRCGYC	1 cut(s)	3147
HspAI	GCGC	1 cut(s)	2972
Ksp22I	TGATCA	1 cut(s)	1653
KspAI	GTTAAC	1 cut(s)	2667
LmnI	GCTCC	4 cut(s)	766, 2702, 2724, 2767
Lsp1109I	GCAGC	6 cut(s)	1606, 2110, 2224, 2226, 2278, 3048
MaeI	CTAG	8 cut(s)	425, 696, 1008, 1062, 1782, 2139, 2340, 2997
MaeII	ACGT	2 cut(s)	766, 3147
MaeIII	GTNAC	3 cut(s)	1070, 2821, 3122
MfeI	CAATTG	4 cut(s)	591, 1260, 2042, 3011
MflI	RGATCY	7 cut(s)	391, 603, 1396, 1934, 2300, 2498, 3170
MhlI	GDGCHC	3 cut(s)	490, 1435, 1931
MlsI	TGGCCA	1 cut(s)	126
MluNI	TGGCCA	1 cut(s)	126
MlyI	GAGTC	8 cut(s)	252, 542, 650, 1346, 1649, 1951, 2060, 2230
MmeI	TCCRAC	4 cut(s)	1769, 1802, 2115, 2268
Mox20I	TGGCCA	1 cut(s)	126
Mph1103I	ATGCAT	3 cut(s)	199, 474, 2810
MroXI	GAANNNNTTC	1 cut(s)	349
MscI	TGGCCA	1 cut(s)	126
MseI	TTAA	8 cut(s)	498, 1095, 1407, 1437, 1706, 1797, 2666, 3178
MslI	CAYNNNNRTG	1 cut(s)	1207
Msp20I	TGGCCA	1 cut(s)	126
MspA1I	CMGCKG	1 cut(s)	1907
MspI	CCGG	9 cut(s)	94, 111, 176, 448, 1091, 1416, 2063, 3094, 3132
MspR9I	CCNGG	7 cut(s)	176, 342, 449, 739, 1091, 1417, 2064
MunI	CAATTG	4 cut(s)	591, 1260, 2042, 3011
Mva1269I	GAATGC	3 cut(s)	19, 2416, 2810
MvaI	CCWGG	2 cut(s)	342, 739
MvnI	CGCG	1 cut(s)	2972
MwoI	GCNNNNNNNGC	7 cut(s)	171, 530, 622, 827, 1460, 2315, 2947
NciI	CCSGG	5 cut(s)	176, 449, 1091, 1417, 2064
NcoI	CCATGG	4 cut(s)	453, 1274, 2930, 3118
NdeI	CATATG	1 cut(s)	718
NlaIV	GGNNCC	2 cut(s)	2471, 2698
NmeAIII	GCCGAG	2 cut(s)	2345, 2673
NmuCI	GTSAC	2 cut(s)	1070, 3122
NsiI	ATGCAT	3 cut(s)	199, 474, 2810
NspI	RCATGY	1 cut(s)	104
NspV	TTCGAA	2 cut(s)	926, 1559
OliI	CACNNNNGTG	1 cut(s)	1207
PagI	TCATGA	2 cut(s)	1656, 2584
PceI	AGGCCT	3 cut(s)	1147, 1237, 2676
PctI	GAATGC	3 cut(s)	19, 2416, 2810
PdmI	GAANNNNTTC	1 cut(s)	349
PflFI	GACNNNGTC	1 cut(s)	2050
PfoI	TCCNGGA	2 cut(s)	737, 1415
PinAI	ACCGGT	2 cut(s)	110, 3093
PkrI	GCNGC	7 cut(s)	7, 1621, 2100, 2216, 2239, 2268, 3038
PleI	GAGTC	8 cut(s)	252, 542, 649, 1346, 1648, 1950, 2059, 2229
PpsI	GAGTC	8 cut(s)	252, 542, 649, 1346, 1648, 1950, 2059, 2229
PpuMI	RGGWCCY	1 cut(s)	1423
PshBI	ATTAAT	1 cut(s)	1706
Psp124BI	GAGCTC	1 cut(s)	1931
Psp5II	RGGWCCY	1 cut(s)	1423
Psp6I	CCWGG	2 cut(s)	340, 737
PspEI	GGTNACC	1 cut(s)	2821
PspGI	CCWGG	2 cut(s)	340, 737
PspN4I	GGNNCC	2 cut(s)	2471, 2698
PspPI	GGNCC	4 cut(s)	173, 450, 1423, 2327
PspPPI	RGGWCCY	1 cut(s)	1423
PsrI	GAACNNNNNNTAC	2 cut(s)	865, 897
PstI	CTGCAG	3 cut(s)	526, 1143, 2479
PstNI	CAGNNNCTG	4 cut(s)	218, 1052, 1619, 1937
PsuI	RGATCY	7 cut(s)	391, 603, 1396, 1934, 2300, 2498, 3170
PsyI	GACNNNGTC	1 cut(s)	2050
RsaI	GTAC	6 cut(s)	1540, 1612, 1738, 1759, 2193, 2835
RsaNI	GTAC	6 cut(s)	1539, 1611, 1737, 1758, 2192, 2834
RseI	CAYNNNNRTG	1 cut(s)	1207
SacI	GAGCTC	1 cut(s)	1931
SaqAI	TTAA	8 cut(s)	498, 1095, 1407, 1437, 1706, 1797, 2666, 3178
SatI	GCNGC	7 cut(s)	6, 1620, 2099, 2215, 2238, 2267, 3037
Sau96I	GGNCC	4 cut(s)	173, 450, 1423, 2327
SchI	GAGTC	8 cut(s)	252, 542, 650, 1346, 1649, 1951, 2060, 2230
ScrFI	CCNGG	7 cut(s)	176, 342, 449, 739, 1091, 1417, 2064
SduI	GDGCHC	3 cut(s)	490, 1435, 1931
SfcI	CTRYAG	4 cut(s)	522, 1139, 2319, 2475
SfuI	TTCGAA	2 cut(s)	926, 1559
SinI	GGWCC	2 cut(s)	1423, 2327
SmiMI	CAYNNNNRTG	1 cut(s)	1207
SmlI	CTYRAG	1 cut(s)	1967
SmoI	CTYRAG	1 cut(s)	1967
SpeI	ACTAGT	1 cut(s)	1061
SseBI	AGGCCT	3 cut(s)	1147, 1237, 2676
SsiI	CCGC	4 cut(s)	118, 889, 1905, 2831
SspMI	CTAG	8 cut(s)	425, 696, 1008, 1062, 1782, 2139, 2340, 2997
SstI	GAGCTC	1 cut(s)	1931
StuI	AGGCCT	3 cut(s)	1147, 1237, 2676
StyD4I	CCNGG	7 cut(s)	174, 340, 447, 737, 1089, 1415, 2062
StyI	CCWWGG	8 cut(s)	386, 453, 1274, 2282, 2419, 2775, 2930, 3118
TaaI	ACNGT	9 cut(s)	567, 678, 872, 1209, 1526, 1795, 1820, 2994, 3156
TaiI	ACGT	2 cut(s)	769, 3150
TatI	WGTACW	3 cut(s)	1538, 1610, 1757
Tru1I	TTAA	8 cut(s)	498, 1095, 1407, 1437, 1706, 1797, 2666, 3178
Tru9I	TTAA	8 cut(s)	498, 1095, 1407, 1437, 1706, 1797, 2666, 3178
TscAI	CASTG	6 cut(s)	540, 585, 1128, 1531, 1852, 2887
TseFI	GTSAC	2 cut(s)	1070, 3122
TseI	GCWGC	7 cut(s)	5, 1619, 2098, 2214, 2237, 2266, 3036
Tsp45I	GTSAC	2 cut(s)	1070, 3122
TspGWI	ACGGA	1 cut(s)	283
TspRI	CASTG	6 cut(s)	540, 585, 1128, 1531, 1852, 2887
Tth111I	GACNNNGTC	1 cut(s)	2050
VpaK11BI	GGWCC	2 cut(s)	1423, 2327
VspI	ATTAAT	1 cut(s)	1706
XbaI	TCTAGA	1 cut(s)	2138
XceI	RCATGY	1 cut(s)	104
XcmI	CCANNNNNNNNNTGG	1 cut(s)	164
XmnI	GAANNNNTTC	1 cut(s)	349
XspI	CTAG	8 cut(s)	425, 696, 1008, 1062, 1782, 2139, 2340, 2997
ZraI	GACGTC	1 cut(s)	3148
Zsp2I	ATGCAT	3 cut(s)	199, 474, 2810

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.