Domain of unknown function (DUF4378)
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G18620 AT1G18620 AT1G18620 AT1G18620 AT1G18620 AT1G74160 AT1G74160 AT1G74160 |
| fragaria_vesca | FvH4_5g13690 FvH4_5g13690 FvH4_5g13690 |
| malus_domestica | MD06G1203000.v1.1 MD14G1213600.v1.1 |
| prunus_persica | Prupe.5G206500_v2.0.a1 |
| pyrus_communis | pycom06g18080 pycom14g17690 |
| rosa_chinensis | RchiOBHm_Chr7g0183251 |
| rosa_laevigata | RLG00000005062 |
| rosa_multiflora | Rmu_co8293079.1_g000001 Rmu_co8448119.1_g000001 Rmu_sc0008744.1_g000012 |
| rosa_roxburghii | Rroxscaffold_3G00270620 |
| rosa_rugosa | Rorug06G0455500 Rorug06G0455600 |
| rosa_samantha | Rh7AG057500 Rh7BG057400 Rh7CG059000 Rh7DG057200 |
| rosa_wichuraiana | Rw7G004710 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 2 cut(s) | 64, 262 |
| AcuI | CTGAAG | 1 cut(s) | 411 |
| AgsI | TTSAA | 4 cut(s) | 176, 292, 302, 331 |
| AluBI | AGCT | 5 cut(s) | 241, 319, 425, 459, 475 |
| AluI | AGCT | 5 cut(s) | 241, 319, 425, 459, 475 |
| Alw26I | GTCTC | 2 cut(s) | 124, 438 |
| AlwI | GGATC | 2 cut(s) | 64, 262 |
| AoxI | GGCC | 2 cut(s) | 430, 487 |
| ApeKI | GCWGC | 1 cut(s) | 565 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 276 |
| AspLEI | GCGC | 1 cut(s) | 142 |
| AspS9I | GGNCC | 1 cut(s) | 83 |
| AsuHPI | GGTGA | 1 cut(s) | 224 |
| AvaII | GGWCC | 1 cut(s) | 83 |
| AxyI | CCTNAGG | 1 cut(s) | 484 |
| BccI | CCATC | 4 cut(s) | 151, 486, 498, 504 |
| BcoDI | GTCTC | 2 cut(s) | 124, 438 |
| BfaI | CTAG | 1 cut(s) | 96 |
| BfmI | CTRYAG | 2 cut(s) | 75, 231 |
| BisI | GCNGC | 1 cut(s) | 566 |
| BlsI | GCNGC | 1 cut(s) | 567 |
| Bme18I | GGWCC | 1 cut(s) | 83 |
| BmgT120I | GGNCC | 1 cut(s) | 83 |
| BmiI | GGNNCC | 1 cut(s) | 454 |
| BmsI | GCATC | 4 cut(s) | 127, 150, 184, 377 |
| BpmI | CTGGAG | 1 cut(s) | 439 |
| BsaI | GGTCTC | 1 cut(s) | 438 |
| BsaJI | CCNNGG | 3 cut(s) | 38, 448, 532 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 437, 467 |
| Bse21I | CCTNAGG | 1 cut(s) | 484 |
| Bse3DI | GCAATG | 1 cut(s) | 187 |
| BseDI | CCNNGG | 3 cut(s) | 38, 448, 532 |
| BseGI | GGATG | 3 cut(s) | 91, 478, 490 |
| BseMI | GCAATG | 1 cut(s) | 187 |
| BseMII | CTCAG | 2 cut(s) | 402, 498 |
| BsgI | GTGCAG | 1 cut(s) | 207 |
| BshFI | GGCC | 2 cut(s) | 432, 489 |
| BsmAI | GTCTC | 2 cut(s) | 124, 438 |
| BsmI | GAATGC | 1 cut(s) | 567 |
| BsnI | GGCC | 2 cut(s) | 432, 489 |
| Bso31I | GGTCTC | 1 cut(s) | 438 |
| Bsp143I | GATC | 3 cut(s) | 56, 217, 254 |
| BspANI | GGCC | 2 cut(s) | 432, 489 |
| BspCNI | CTCAG | 2 cut(s) | 403, 497 |
| BspLI | GGNNCC | 1 cut(s) | 454 |
| BspMAI | CTGCAG | 1 cut(s) | 235 |
| BspPI | GGATC | 2 cut(s) | 64, 262 |
| BspTNI | GGTCTC | 1 cut(s) | 438 |
| BsrDI | GCAATG | 1 cut(s) | 187 |
| BssECI | CCNNGG | 3 cut(s) | 38, 448, 532 |
| BssMI | GATC | 3 cut(s) | 56, 217, 254 |
| BssT1I | CCWWGG | 2 cut(s) | 38, 532 |
| Bst4CI | ACNGT | 1 cut(s) | 79 |
| Bst6I | CTCTTC | 1 cut(s) | 42 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 194 |
| BstC8I | GCNNGC | 2 cut(s) | 539, 550 |
| BstDEI | CTNAG | 4 cut(s) | 307, 320, 411, 484 |
| BstF5I | GGATG | 3 cut(s) | 91, 478, 490 |
| BstHHI | GCGC | 1 cut(s) | 142 |
| BstKTI | GATC | 3 cut(s) | 59, 220, 257 |
| BstMAI | GTCTC | 2 cut(s) | 124, 438 |
| BstMBI | GATC | 3 cut(s) | 56, 217, 254 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 71, 194 |
| BstSFI | CTRYAG | 2 cut(s) | 75, 231 |
| BstX2I | RGATCY | 2 cut(s) | 56, 254 |
| BstYI | RGATCY | 2 cut(s) | 56, 254 |
| Bsu36I | CCTNAGG | 1 cut(s) | 484 |
| BsuRI | GGCC | 2 cut(s) | 432, 489 |
| BtgZI | GCGATG | 1 cut(s) | 354 |
| BtsCI | GGATG | 3 cut(s) | 91, 478, 490 |
| Cac8I | GCNNGC | 2 cut(s) | 539, 550 |
| CfoI | GCGC | 1 cut(s) | 142 |
| Cfr13I | GGNCC | 1 cut(s) | 83 |
| DdeI | CTNAG | 4 cut(s) | 307, 320, 411, 484 |
| DpnI | GATC | 3 cut(s) | 58, 219, 256 |
| DpnII | GATC | 3 cut(s) | 56, 217, 254 |
| Eam1104I | CTCTTC | 1 cut(s) | 42 |
| EarI | CTCTTC | 1 cut(s) | 42 |
| Eco130I | CCWWGG | 2 cut(s) | 38, 532 |
| Eco147I | AGGCCT | 1 cut(s) | 432 |
| Eco31I | GGTCTC | 1 cut(s) | 438 |
| Eco47I | GGWCC | 1 cut(s) | 83 |
| Eco57I | CTGAAG | 1 cut(s) | 411 |
| Eco81I | CCTNAGG | 1 cut(s) | 484 |
| EcoT14I | CCWWGG | 2 cut(s) | 38, 532 |
| ErhI | CCWWGG | 2 cut(s) | 38, 532 |
| FaiI | YATR | 7 cut(s) | 54, 127, 129, 284, 336, 363, 517 |
| Fnu4HI | GCNGC | 1 cut(s) | 566 |
| FokI | GGATG | 3 cut(s) | 78, 465, 477 |
| Fsp4HI | GCNGC | 1 cut(s) | 566 |
| FspBI | CTAG | 1 cut(s) | 96 |
| GlaI | GCGC | 1 cut(s) | 141 |
| GluI | GCNGC | 1 cut(s) | 566 |
| GsuI | CTGGAG | 1 cut(s) | 439 |
| HaeIII | GGCC | 2 cut(s) | 432, 489 |
| HhaI | GCGC | 1 cut(s) | 142 |
| Hin6I | GCGC | 1 cut(s) | 140 |
| HinP1I | GCGC | 1 cut(s) | 140 |
| HindIII | AAGCTT | 2 cut(s) | 239, 317 |
| HinfI | GANTC | 1 cut(s) | 226 |
| HphI | GGTGA | 1 cut(s) | 224 |
| Hpy188I | TCNGA | 6 cut(s) | 27, 102, 271, 315, 412, 443 |
| Hpy188III | TCNNGA | 4 cut(s) | 86, 113, 341, 392 |
| HpyAV | CCTTC | 2 cut(s) | 182, 203 |
| HpyCH4III | ACNGT | 1 cut(s) | 79 |
| HpyCH4V | TGCA | 6 cut(s) | 4, 188, 233, 368, 552, 565 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 71, 194 |
| HpyF3I | CTNAG | 4 cut(s) | 307, 320, 411, 484 |
| HspAI | GCGC | 1 cut(s) | 140 |
| Kzo9I | GATC | 3 cut(s) | 56, 217, 254 |
| LmnI | GCTCC | 3 cut(s) | 458, 480, 524 |
| LpnPI | CCDG | 9 cut(s) | 99, 243, 243, 342, 405, 414, 469, 471, 517 |
| LweI | GCATC | 4 cut(s) | 127, 150, 184, 377 |
| MaeI | CTAG | 1 cut(s) | 96 |
| MaeIII | GTNAC | 1 cut(s) | 16 |
| MalI | GATC | 3 cut(s) | 58, 219, 256 |
| MboI | GATC | 3 cut(s) | 56, 217, 254 |
| MboII | GAAGA | 5 cut(s) | 59, 203, 227, 304, 570 |
| MflI | RGATCY | 2 cut(s) | 56, 254 |
| MluCI | AATT | 1 cut(s) | 287 |
| MmeI | TCCRAC | 1 cut(s) | 24 |
| MnlI | CCTC | 3 cut(s) | 443, 458, 493 |
| MroXI | GAANNNNTTC | 1 cut(s) | 276 |
| MslI | CAYNNNNRTG | 1 cut(s) | 281 |
| Mva1269I | GAATGC | 1 cut(s) | 567 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 71, 194 |
| NdeII | GATC | 3 cut(s) | 56, 217, 254 |
| NlaIV | GGNNCC | 1 cut(s) | 454 |
| NmeAIII | GCCGAG | 2 cut(s) | 101, 429 |
| PceI | AGGCCT | 1 cut(s) | 432 |
| PctI | GAATGC | 1 cut(s) | 567 |
| PdmI | GAANNNNTTC | 1 cut(s) | 276 |
| PfeI | GAWTC | 1 cut(s) | 226 |
| PkrI | GCNGC | 1 cut(s) | 567 |
| PspN4I | GGNNCC | 1 cut(s) | 454 |
| PspPI | GGNCC | 1 cut(s) | 83 |
| PstI | CTGCAG | 1 cut(s) | 235 |
| PsuI | RGATCY | 2 cut(s) | 56, 254 |
| RseI | CAYNNNNRTG | 1 cut(s) | 281 |
| SatI | GCNGC | 1 cut(s) | 566 |
| Sau3AI | GATC | 3 cut(s) | 56, 217, 254 |
| Sau96I | GGNCC | 1 cut(s) | 83 |
| SetI | ASST | 8 cut(s) | 44, 214, 243, 321, 427, 450, 461, 477 |
| SfaNI | GCATC | 4 cut(s) | 127, 150, 184, 377 |
| SfcI | CTRYAG | 2 cut(s) | 75, 231 |
| SinI | GGWCC | 1 cut(s) | 83 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 281 |
| Sse9I | AATT | 1 cut(s) | 287 |
| SseBI | AGGCCT | 1 cut(s) | 432 |
| SspMI | CTAG | 1 cut(s) | 96 |
| StuI | AGGCCT | 1 cut(s) | 432 |
| StyI | CCWWGG | 2 cut(s) | 38, 532 |
| TaaI | ACNGT | 1 cut(s) | 79 |
| TasI | AATT | 1 cut(s) | 287 |
| TfiI | GAWTC | 1 cut(s) | 226 |
| TseI | GCWGC | 1 cut(s) | 565 |
| TspDTI | ATGAA | 2 cut(s) | 299, 360 |
| VpaK11BI | GGWCC | 1 cut(s) | 83 |
| XmnI | GAANNNNTTC | 1 cut(s) | 276 |
| XspI | CTAG | 1 cut(s) | 96 |