Basic Information
Type: gene
Biological Identity
arabidopsis_thaliana
Physical Location & Seq
Reverse (-)
7814663 .. 7815722
AT1G22140.3
Length: 219 bp
ATGGGAGCCGGTAATGGAGAAACGCCAAAACCTACACAGATTTCAATTTCTAAAGATCAATTCCTCGCTTGGAAACGCCAAAAGGATGCTGAGTTATTAGCCAAACAAGCTGAAGCAGCAAGGAAACGACAAGAGGACATAGCTTCAGGTCGTGTTCCAATGAATGGTCGTGAGCTTTTCTTGCATGAGCCTTGGGTTTTCGACGATACTCATCATTGA
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Protein Analysis
6.83
Isoelectric Point (pI)
| Domain Name |
Pfam ID |
Position |
E-value |
Description |
| DFRP_C |
PF16543 |
12 - 69 |
1.2e-06 |
DRG Family Regulatory Proteins, Tma46 |
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...
Gene Family Tree
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Publication-ready
Orthologous Genes
(Group: OG0011924)
Restriction Enzyme Sites
| Enzyme |
Recognition Site |
Cut Count |
Positions (bp) |
| AccB7I |
CCANNNNNTGG |
1 cut(s)
|
164 |
| AcuI |
CTGAAG |
2 cut(s)
|
129, 132 |
| AfiI |
CCNNNNNNNGG |
1 cut(s)
|
164 |
| AgsI |
TTSAA |
1 cut(s)
|
45 |
| AluBI |
AGCT |
3 cut(s)
|
110, 143, 175 |
| AluI |
AGCT |
3 cut(s)
|
110, 143, 175 |
| ApeKI |
GCWGC |
1 cut(s)
|
116 |
| BbvI |
GCAGC |
1 cut(s)
|
128 |
| BisI |
GCNGC |
1 cut(s)
|
117 |
| BlsI |
GCNGC |
1 cut(s)
|
118 |
| BmiI |
GGNNCC |
1 cut(s)
|
7 |
| BmsI |
GCATC |
1 cut(s)
|
76 |
| BsaBI |
GATNNNNATC |
1 cut(s)
|
210 |
| BsaJI |
CCNNGG |
1 cut(s)
|
191 |
| Bsc4I |
CCNNNNNNNGG |
1 cut(s)
|
164 |
| Bse118I |
RCCGGY |
1 cut(s)
|
8 |
| Bse8I |
GATNNNNATC |
1 cut(s)
|
210 |
| BseDI |
CCNNGG |
1 cut(s)
|
191 |
| BseGI |
GGATG |
1 cut(s)
|
91 |
| BseJI |
GATNNNNATC |
1 cut(s)
|
210 |
| BseLI |
CCNNNNNNNGG |
1 cut(s)
|
164 |
| BseMII |
CTCAG |
1 cut(s)
|
81 |
| BseXI |
GCAGC |
1 cut(s)
|
128 |
| BsiSI |
CCGG |
1 cut(s)
|
9 |
| BslI |
CCNNNNNNNGG |
1 cut(s)
|
164 |
| Bsp143I |
GATC |
1 cut(s)
|
55 |
| BspCNI |
CTCAG |
1 cut(s)
|
82 |
| BspLI |
GGNNCC |
1 cut(s)
|
7 |
| BsrFI |
RCCGGY |
1 cut(s)
|
8 |
| BssAI |
RCCGGY |
1 cut(s)
|
8 |
| BssECI |
CCNNGG |
1 cut(s)
|
191 |
| BssMI |
GATC |
1 cut(s)
|
55 |
| BssT1I |
CCWWGG |
1 cut(s)
|
191 |
| BstDEI |
CTNAG |
1 cut(s)
|
90 |
| BstF5I |
GGATG |
1 cut(s)
|
91 |
| BstKTI |
GATC |
1 cut(s)
|
58 |
| BstMBI |
GATC |
1 cut(s)
|
55 |
| BstMWI |
GCNNNNNNNGC |
3 cut(s)
|
107, 116, 181 |
| BstV1I |
GCAGC |
1 cut(s)
|
128 |
| BtsCI |
GGATG |
1 cut(s)
|
91 |
| Cfr10I |
RCCGGY |
1 cut(s)
|
8 |
| CviAII |
CATG |
1 cut(s)
|
185 |
| CviJI |
RGCY |
6 cut(s)
|
8, 101, 110, 143, 175, 190 |
| CviKI_1 |
RGCY |
6 cut(s)
|
8, 101, 110, 143, 175, 190 |
| DdeI |
CTNAG |
1 cut(s)
|
90 |
| DpnI |
GATC |
1 cut(s)
|
57 |
| DpnII |
GATC |
1 cut(s)
|
55 |
| Eco130I |
CCWWGG |
1 cut(s)
|
191 |
| Eco57I |
CTGAAG |
2 cut(s)
|
129, 132 |
| EcoT14I |
CCWWGG |
1 cut(s)
|
191 |
| ErhI |
CCWWGG |
1 cut(s)
|
191 |
| FaeI |
CATG |
1 cut(s)
|
188 |
| FaiI |
YATR |
2 cut(s)
|
140, 186 |
| FatI |
CATG |
1 cut(s)
|
184 |
| Fnu4HI |
GCNGC |
1 cut(s)
|
117 |
| FokI |
GGATG |
1 cut(s)
|
98 |
| Fsp4HI |
GCNGC |
1 cut(s)
|
117 |
| GluI |
GCNGC |
1 cut(s)
|
117 |
| HapII |
CCGG |
1 cut(s)
|
9 |
| Hin1II |
CATG |
1 cut(s)
|
188 |
| HpaII |
CCGG |
1 cut(s)
|
9 |
| Hpy188III |
TCNNGA |
1 cut(s)
|
170 |
| Hpy99I |
CGWCG |
1 cut(s)
|
206 |
| HpyCH4V |
TGCA |
1 cut(s)
|
184 |
| HpyF10VI |
GCNNNNNNNGC |
3 cut(s)
|
107, 116, 181 |
| HpyF3I |
CTNAG |
1 cut(s)
|
90 |
| Hsp92II |
CATG |
1 cut(s)
|
188 |
| Kzo9I |
GATC |
1 cut(s)
|
55 |
| LmnI |
GCTCC |
1 cut(s)
|
5 |
| LpnPI |
CCDG |
2 cut(s)
|
22, 132 |
| Lsp1109I |
GCAGC |
1 cut(s)
|
128 |
| LweI |
GCATC |
1 cut(s)
|
76 |
| MalI |
GATC |
1 cut(s)
|
57 |
| MboI |
GATC |
1 cut(s)
|
55 |
| MluCI |
AATT |
2 cut(s)
|
45, 59 |
| MnlI |
CCTC |
2 cut(s)
|
74, 127 |
| MspI |
CCGG |
1 cut(s)
|
9 |
| MwoI |
GCNNNNNNNGC |
3 cut(s)
|
107, 116, 181 |
| NdeII |
GATC |
1 cut(s)
|
55 |
| NlaIII |
CATG |
1 cut(s)
|
188 |
| NlaIV |
GGNNCC |
1 cut(s)
|
7 |
| PflMI |
CCANNNNNTGG |
1 cut(s)
|
164 |
| PkrI |
GCNGC |
1 cut(s)
|
118 |
| PspN4I |
GGNNCC |
1 cut(s)
|
7 |
| SatI |
GCNGC |
1 cut(s)
|
117 |
| Sau3AI |
GATC |
1 cut(s)
|
55 |
| SetI |
ASST |
5 cut(s)
|
34, 112, 145, 151, 177 |
| SfaNI |
GCATC |
1 cut(s)
|
76 |
| Sse9I |
AATT |
2 cut(s)
|
45, 59 |
| StyI |
CCWWGG |
1 cut(s)
|
191 |
| TaqI |
TCGA |
1 cut(s)
|
201 |
| TasI |
AATT |
2 cut(s)
|
45, 59 |
| TseI |
GCWGC |
1 cut(s)
|
116 |
| TspDTI |
ATGAA |
1 cut(s)
|
176 |
| Van91I |
CCANNNNNTGG |
1 cut(s)
|
164 |
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.