MA3 domain-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G22730 |
| fragaria_vesca | FvH4_2g12790 |
| malus_domestica | MD05G1036500.v1.1 MD10G1038400.v1.1 |
| prunus_persica | Prupe.8G044800_v2.0.a1 |
| pyrus_communis | pycom05g02690 pycom10g02640 pycom10g02760 |
| rosa_chinensis | RchiOBHm_Chr6g0273671 |
| rosa_laevigata | RLG00000013603 |
| rosa_multiflora | Rmu_sc0002231.1_g000021 |
| rosa_roxburghii | Rroxscaffold_7G00195170 |
| rosa_rugosa | Rorug06G0076800 Rorug06G0076900 Rorug06G0077000 |
| rosa_samantha | Rh6AG191400 Rh6BG195400 Rh6CG194900 Rh6DG186800 |
| rosa_wichuraiana | Rw6G016750 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 471 |
| AccB1I | GGYRCC | 1 cut(s) | 311 |
| AccI | GTMKAC | 1 cut(s) | 127 |
| AccII | CGCG | 1 cut(s) | 1278 |
| AciI | CCGC | 2 cut(s) | 701, 1076 |
| AclWI | GGATC | 9 cut(s) | 29, 42, 230, 470, 1625, 1659, 1672, 1687, 1820 |
| AcsI | RAATTY | 1 cut(s) | 60 |
| AcuI | CTGAAG | 3 cut(s) | 732, 1104, 1206 |
| AcyI | GRCGYC | 1 cut(s) | 468 |
| AfaI | GTAC | 3 cut(s) | 272, 368, 1233 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 1544, 1614 |
| AhlI | ACTAGT | 1 cut(s) | 1879 |
| AjiI | CACGTC | 1 cut(s) | 1601 |
| AleI | CACNNNNGTG | 1 cut(s) | 977 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 834, 866 |
| Alw21I | GWGCWC | 3 cut(s) | 9, 886, 1353 |
| Alw26I | GTCTC | 9 cut(s) | 331, 400, 804, 965, 1029, 1360, 1643, 1722, 1723 |
| AlwI | GGATC | 9 cut(s) | 29, 42, 230, 470, 1625, 1659, 1672, 1687, 1820 |
| Ama87I | CYCGRG | 2 cut(s) | 579, 1538 |
| AoxI | GGCC | 2 cut(s) | 93, 282 |
| ApeKI | GCWGC | 5 cut(s) | 246, 437, 637, 925, 1961 |
| ApoI | RAATTY | 1 cut(s) | 60 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 188, 220, 2006, 2038 |
| AspLEI | GCGC | 3 cut(s) | 1160, 1280, 1394 |
| AsuC2I | CCSGG | 1 cut(s) | 1662 |
| AsuHPI | GGTGA | 5 cut(s) | 126, 991, 1226, 1622, 1772 |
| AvaI | CYCGRG | 2 cut(s) | 579, 1538 |
| AxyI | CCTNAGG | 1 cut(s) | 90 |
| BamHI | GGATCC | 2 cut(s) | 34, 1664 |
| BanI | GGYRCC | 1 cut(s) | 311 |
| BbsI | GAAGAC | 2 cut(s) | 1461, 2058 |
| Bbv12I | GWGCWC | 3 cut(s) | 9, 886, 1353 |
| BbvCI | CCTCAGC | 1 cut(s) | 756 |
| BbvI | GCAGC | 5 cut(s) | 233, 424, 624, 912, 1948 |
| BccI | CCATC | 3 cut(s) | 723, 1083, 1333 |
| BceAI | ACGGC | 3 cut(s) | 1032, 1756, 2074 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 1238, 1272, 1570, 1604 |
| BclI | TGATCA | 1 cut(s) | 888 |
| BcnI | CCSGG | 1 cut(s) | 1662 |
| BcoDI | GTCTC | 9 cut(s) | 331, 400, 804, 965, 1029, 1360, 1643, 1722, 1723 |
| BcuI | ACTAGT | 1 cut(s) | 1879 |
| BfaI | CTAG | 9 cut(s) | 692, 771, 929, 1241, 1307, 1706, 1743, 1763, 1880 |
| BfmI | CTRYAG | 1 cut(s) | 1416 |
| BfoI | RGCGCY | 1 cut(s) | 1161 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 101 |
| BglII | AGATCT | 2 cut(s) | 931, 1936 |
| BisI | GCNGC | 6 cut(s) | 247, 438, 638, 926, 1077, 1962 |
| BlsI | GCNGC | 6 cut(s) | 248, 439, 639, 927, 1078, 1963 |
| Bme1390I | CCNGG | 1 cut(s) | 1662 |
| BmeT110I | CYCGRG | 2 cut(s) | 579, 1538 |
| BmgBI | CACGTC | 1 cut(s) | 1601 |
| BmiI | GGNNCC | 3 cut(s) | 36, 313, 1666 |
| BmrFI | CCNGG | 1 cut(s) | 1662 |
| BmrI | ACTGGG | 1 cut(s) | 1436 |
| BmsI | GCATC | 8 cut(s) | 244, 538, 821, 843, 1117, 1268, 1392, 1948 |
| BmuI | ACTGGG | 1 cut(s) | 1436 |
| BpiI | GAAGAC | 2 cut(s) | 1461, 2058 |
| BplI | GAGNNNNNCTC | 6 cut(s) | 1532, 1564, 1640, 1672, 1703, 1735 |
| BpmI | CTGGAG | 1 cut(s) | 1138 |
| Bpu10I | CCTNAGC | 1 cut(s) | 756 |
| BpuEI | CTTGAG | 3 cut(s) | 602, 900, 1534 |
| BpuMI | CCSGG | 1 cut(s) | 1662 |
| BsaHI | GRCGYC | 1 cut(s) | 468 |
| BsaI | GGTCTC | 2 cut(s) | 965, 1722 |
| BsaJI | CCNNGG | 3 cut(s) | 399, 1505, 1539 |
| BsaWI | WCCGGW | 1 cut(s) | 1607 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 1544, 1614 |
| Bse1I | ACTGG | 2 cut(s) | 513, 1442 |
| Bse21I | CCTNAGG | 1 cut(s) | 90 |
| Bse3DI | GCAATG | 5 cut(s) | 83, 229, 903, 1317, 1586 |
| BseDI | CCNNGG | 3 cut(s) | 399, 1505, 1539 |
| BseGI | GGATG | 4 cut(s) | 766, 1094, 1191, 1954 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 1544, 1614 |
| BseMI | GCAATG | 5 cut(s) | 83, 229, 903, 1317, 1586 |
| BseMII | CTCAG | 7 cut(s) | 104, 354, 669, 747, 989, 1747, 2022 |
| BseNI | ACTGG | 2 cut(s) | 513, 1442 |
| BseRI | GAGGAG | 3 cut(s) | 437, 1650, 1653 |
| BseXI | GCAGC | 5 cut(s) | 233, 424, 624, 912, 1948 |
| BseYI | CCCAGC | 1 cut(s) | 1629 |
| Bsh1236I | CGCG | 1 cut(s) | 1278 |
| BshFI | GGCC | 2 cut(s) | 95, 284 |
| BshNI | GGYRCC | 1 cut(s) | 311 |
| BsiHKAI | GWGCWC | 3 cut(s) | 9, 886, 1353 |
| BsiHKCI | CYCGRG | 2 cut(s) | 579, 1538 |
| BsiSI | CCGG | 2 cut(s) | 1608, 1661 |
| BslFI | GGGAC | 2 cut(s) | 751, 1937 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 1544, 1614 |
| BsmAI | GTCTC | 9 cut(s) | 331, 400, 804, 965, 1029, 1360, 1643, 1722, 1723 |
| BsmBI | CGTCTC | 1 cut(s) | 1360 |
| BsmFI | GGGAC | 2 cut(s) | 751, 1937 |
| BsmI | GAATGC | 3 cut(s) | 1261, 1394, 1773 |
| BsnI | GGCC | 2 cut(s) | 95, 284 |
| Bso31I | GGTCTC | 2 cut(s) | 965, 1722 |
| BsoBI | CYCGRG | 2 cut(s) | 579, 1538 |
| Bsp1286I | GDGCHC | 3 cut(s) | 9, 886, 1353 |
| Bsp19I | CCATGG | 1 cut(s) | 399 |
| BspACI | CCGC | 2 cut(s) | 701, 1076 |
| BspANI | GGCC | 2 cut(s) | 95, 284 |
| BspCNI | CTCAG | 7 cut(s) | 103, 355, 670, 748, 988, 1746, 2023 |
| BspFNI | CGCG | 1 cut(s) | 1278 |
| BspHI | TCATGA | 2 cut(s) | 801, 865 |
| BspLI | GGNNCC | 3 cut(s) | 36, 313, 1666 |
| BspMAI | CTGCAG | 1 cut(s) | 1420 |
| BspPI | GGATC | 9 cut(s) | 29, 42, 230, 470, 1625, 1659, 1672, 1687, 1820 |
| BspQI | GCTCTTC | 1 cut(s) | 677 |
| BspT107I | GGYRCC | 1 cut(s) | 311 |
| BspTNI | GGTCTC | 2 cut(s) | 965, 1722 |
| BsrDI | GCAATG | 5 cut(s) | 83, 229, 903, 1317, 1586 |
| BsrI | ACTGG | 2 cut(s) | 513, 1442 |
| BssECI | CCNNGG | 3 cut(s) | 399, 1505, 1539 |
| BssNI | GRCGYC | 1 cut(s) | 468 |
| BssT1I | CCWWGG | 1 cut(s) | 399 |
| Bst4CI | ACNGT | 5 cut(s) | 289, 371, 1059, 1672, 1842 |
| Bst6I | CTCTTC | 4 cut(s) | 677, 719, 1704, 1815 |
| BstACI | GRCGYC | 1 cut(s) | 468 |
| BstC8I | GCNNGC | 3 cut(s) | 1045, 1546, 1997 |
| BstDEI | CTNAG | 8 cut(s) | 90, 363, 678, 756, 975, 1471, 1733, 2031 |
| BstDSI | CCRYGG | 2 cut(s) | 399, 1505 |
| BstF5I | GGATG | 4 cut(s) | 766, 1094, 1191, 1954 |
| BstFNI | CGCG | 1 cut(s) | 1278 |
| BstH2I | RGCGCY | 1 cut(s) | 1161 |
| BstHHI | GCGC | 3 cut(s) | 1160, 1280, 1394 |
| BstMAI | GTCTC | 9 cut(s) | 331, 400, 804, 965, 1029, 1360, 1643, 1722, 1723 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 101 |
| BstSCI | CCNGG | 1 cut(s) | 1660 |
| BstSFI | CTRYAG | 1 cut(s) | 1416 |
| BstUI | CGCG | 1 cut(s) | 1278 |
| BstV1I | GCAGC | 5 cut(s) | 233, 424, 624, 912, 1948 |
| BstV2I | GAAGAC | 2 cut(s) | 1461, 2058 |
| BstX2I | RGATCY | 7 cut(s) | 34, 235, 931, 1617, 1664, 1692, 1936 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 406 |
| BstYI | RGATCY | 7 cut(s) | 34, 235, 931, 1617, 1664, 1692, 1936 |
| Bsu36I | CCTNAGG | 1 cut(s) | 90 |
| BsuRI | GGCC | 2 cut(s) | 95, 284 |
| BtgI | CCRYGG | 2 cut(s) | 399, 1505 |
| BtrI | CACGTC | 1 cut(s) | 1601 |
| BtsCI | GGATG | 4 cut(s) | 766, 1094, 1191, 1954 |
| BtsI | GCAGTG | 1 cut(s) | 1425 |
| BtsIMutI | CAGTG | 4 cut(s) | 884, 1425, 1449, 1677 |
| Cac8I | GCNNGC | 3 cut(s) | 1045, 1546, 1997 |
| CciI | TCATGA | 2 cut(s) | 801, 865 |
| CfoI | GCGC | 3 cut(s) | 1160, 1280, 1394 |
| CseI | GACGC | 1 cut(s) | 1049 |
| Csp6I | GTAC | 3 cut(s) | 271, 367, 1232 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 1464, 1494, 1499, 1529 |
| CviAII | CATG | 8 cut(s) | 100, 400, 416, 707, 802, 866, 892, 1465 |
| CviQI | GTAC | 3 cut(s) | 271, 367, 1232 |
| DdeI | CTNAG | 8 cut(s) | 90, 363, 678, 756, 975, 1471, 1733, 2031 |
| DraI | TTTAAA | 2 cut(s) | 1171, 1912 |
| Eam1104I | CTCTTC | 4 cut(s) | 677, 719, 1704, 1815 |
| EarI | CTCTTC | 4 cut(s) | 677, 719, 1704, 1815 |
| Eco130I | CCWWGG | 1 cut(s) | 399 |
| Eco31I | GGTCTC | 2 cut(s) | 965, 1722 |
| Eco57I | CTGAAG | 3 cut(s) | 732, 1104, 1206 |
| Eco81I | CCTNAGG | 1 cut(s) | 90 |
| Eco88I | CYCGRG | 2 cut(s) | 579, 1538 |
| EcoT14I | CCWWGG | 1 cut(s) | 399 |
| EcoT22I | ATGCAT | 2 cut(s) | 836, 1261 |
| ErhI | CCWWGG | 1 cut(s) | 399 |
| Esp3I | CGTCTC | 1 cut(s) | 1360 |
| FaeI | CATG | 8 cut(s) | 103, 403, 419, 710, 805, 869, 895, 1468 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1587, 1619 |
| FaqI | GGGAC | 2 cut(s) | 751, 1937 |
| FatI | CATG | 8 cut(s) | 99, 399, 415, 706, 801, 865, 891, 1464 |
| FbaI | TGATCA | 1 cut(s) | 888 |
| FblI | GTMKAC | 1 cut(s) | 127 |
| Fnu4HI | GCNGC | 6 cut(s) | 247, 438, 638, 926, 1077, 1962 |
| FokI | GGATG | 4 cut(s) | 773, 1101, 1178, 1961 |
| Fsp4HI | GCNGC | 6 cut(s) | 247, 438, 638, 926, 1077, 1962 |
| FspBI | CTAG | 9 cut(s) | 692, 771, 929, 1241, 1307, 1706, 1743, 1763, 1880 |
| GlaI | GCGC | 3 cut(s) | 1159, 1279, 1393 |
| GluI | GCNGC | 6 cut(s) | 247, 438, 638, 926, 1077, 1962 |
| GsaI | CCCAGC | 1 cut(s) | 1633 |
| GsuI | CTGGAG | 1 cut(s) | 1138 |
| HaeII | RGCGCY | 1 cut(s) | 1161 |
| HaeIII | GGCC | 2 cut(s) | 95, 284 |
| HapII | CCGG | 2 cut(s) | 1608, 1661 |
| HgaI | GACGC | 1 cut(s) | 1049 |
| HhaI | GCGC | 3 cut(s) | 1160, 1280, 1394 |
| Hin1I | GRCGYC | 1 cut(s) | 468 |
| Hin1II | CATG | 8 cut(s) | 103, 403, 419, 710, 805, 869, 895, 1468 |
| Hin6I | GCGC | 3 cut(s) | 1158, 1278, 1392 |
| HinP1I | GCGC | 3 cut(s) | 1158, 1278, 1392 |
| HincII | GTYRAC | 2 cut(s) | 592, 1489 |
| HindII | GTYRAC | 2 cut(s) | 592, 1489 |
| HindIII | AAGCTT | 2 cut(s) | 822, 1997 |
| HpaII | CCGG | 2 cut(s) | 1608, 1661 |
| HphI | GGTGA | 5 cut(s) | 126, 991, 1226, 1622, 1772 |
| Hpy166II | GTNNAC | 4 cut(s) | 128, 490, 592, 1489 |
| Hpy8I | GTNNAC | 4 cut(s) | 128, 490, 592, 1489 |
| Hpy99I | CGWCG | 1 cut(s) | 470 |
| HpyAV | CCTTC | 7 cut(s) | 143, 274, 1079, 1327, 1669, 1819, 1997 |
| HpyCH4III | ACNGT | 5 cut(s) | 289, 371, 1059, 1672, 1842 |
| HpyCH4IV | ACGT | 3 cut(s) | 468, 1600, 1624 |
| HpyCH4V | TGCA | 6 cut(s) | 45, 551, 834, 1130, 1259, 1418 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 101 |
| HpyF3I | CTNAG | 8 cut(s) | 90, 363, 678, 756, 975, 1471, 1733, 2031 |
| HpySE526I | ACGT | 3 cut(s) | 468, 1600, 1624 |
| Hsp92I | GRCGYC | 1 cut(s) | 468 |
| Hsp92II | CATG | 8 cut(s) | 103, 403, 419, 710, 805, 869, 895, 1468 |
| HspAI | GCGC | 3 cut(s) | 1158, 1278, 1392 |
| Ksp22I | TGATCA | 1 cut(s) | 888 |
| LguI | GCTCTTC | 1 cut(s) | 677 |
| LmnI | GCTCC | 3 cut(s) | 4, 349, 1507 |
| Lsp1109I | GCAGC | 5 cut(s) | 233, 424, 624, 912, 1948 |
| LweI | GCATC | 8 cut(s) | 244, 538, 821, 843, 1117, 1268, 1392, 1948 |
| MaeI | CTAG | 9 cut(s) | 692, 771, 929, 1241, 1307, 1706, 1743, 1763, 1880 |
| MaeII | ACGT | 3 cut(s) | 468, 1600, 1624 |
| MaeIII | GTNAC | 4 cut(s) | 979, 1140, 1214, 1882 |
| MfeI | CAATTG | 2 cut(s) | 53, 585 |
| MflI | RGATCY | 7 cut(s) | 34, 235, 931, 1617, 1664, 1692, 1936 |
| MhlI | GDGCHC | 3 cut(s) | 9, 886, 1353 |
| MluCI | AATT | 8 cut(s) | 53, 60, 585, 632, 745, 774, 1250, 1644 |
| MlyI | GAGTC | 4 cut(s) | 130, 691, 1276, 1528 |
| MmeI | TCCRAC | 1 cut(s) | 263 |
| Mph1103I | ATGCAT | 2 cut(s) | 836, 1261 |
| MseI | TTAA | 7 cut(s) | 113, 263, 336, 777, 1170, 1526, 1911 |
| MslI | CAYNNNNRTG | 3 cut(s) | 404, 896, 977 |
| MspI | CCGG | 2 cut(s) | 1608, 1661 |
| MspR9I | CCNGG | 1 cut(s) | 1662 |
| MunI | CAATTG | 2 cut(s) | 53, 585 |
| Mva1269I | GAATGC | 3 cut(s) | 1261, 1394, 1773 |
| MvnI | CGCG | 1 cut(s) | 1278 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 101 |
| NciI | CCSGG | 1 cut(s) | 1662 |
| NcoI | CCATGG | 1 cut(s) | 399 |
| NlaIII | CATG | 8 cut(s) | 103, 403, 419, 710, 805, 869, 895, 1468 |
| NlaIV | GGNNCC | 3 cut(s) | 36, 313, 1666 |
| NmuCI | GTSAC | 3 cut(s) | 979, 1214, 1882 |
| NsiI | ATGCAT | 2 cut(s) | 836, 1261 |
| OliI | CACNNNNGTG | 1 cut(s) | 977 |
| PagI | TCATGA | 2 cut(s) | 801, 865 |
| PciSI | GCTCTTC | 1 cut(s) | 677 |
| PctI | GAATGC | 3 cut(s) | 1261, 1394, 1773 |
| PkrI | GCNGC | 6 cut(s) | 248, 439, 639, 927, 1078, 1963 |
| PleI | GAGTC | 4 cut(s) | 129, 691, 1275, 1528 |
| PpsI | GAGTC | 4 cut(s) | 129, 691, 1275, 1528 |
| PspFI | CCCAGC | 1 cut(s) | 1629 |
| PspN4I | GGNNCC | 3 cut(s) | 36, 313, 1666 |
| PstI | CTGCAG | 1 cut(s) | 1420 |
| PsuI | RGATCY | 7 cut(s) | 34, 235, 931, 1617, 1664, 1692, 1936 |
| RsaI | GTAC | 3 cut(s) | 272, 368, 1233 |
| RsaNI | GTAC | 3 cut(s) | 271, 367, 1232 |
| RseI | CAYNNNNRTG | 3 cut(s) | 404, 896, 977 |
| SapI | GCTCTTC | 1 cut(s) | 677 |
| SaqAI | TTAA | 7 cut(s) | 113, 263, 336, 777, 1170, 1526, 1911 |
| SatI | GCNGC | 6 cut(s) | 247, 438, 638, 926, 1077, 1962 |
| SchI | GAGTC | 4 cut(s) | 130, 691, 1276, 1528 |
| ScrFI | CCNGG | 1 cut(s) | 1662 |
| SduI | GDGCHC | 3 cut(s) | 9, 886, 1353 |
| SfaNI | GCATC | 8 cut(s) | 244, 538, 821, 843, 1117, 1268, 1392, 1948 |
| SfcI | CTRYAG | 1 cut(s) | 1416 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 404, 896, 977 |
| SmlI | CTYRAG | 3 cut(s) | 617, 915, 1549 |
| SmoI | CTYRAG | 3 cut(s) | 617, 915, 1549 |
| SpeI | ACTAGT | 1 cut(s) | 1879 |
| Sse9I | AATT | 8 cut(s) | 53, 60, 585, 632, 745, 774, 1250, 1644 |
| SsiI | CCGC | 2 cut(s) | 701, 1076 |
| SspMI | CTAG | 9 cut(s) | 692, 771, 929, 1241, 1307, 1706, 1743, 1763, 1880 |
| StyD4I | CCNGG | 1 cut(s) | 1660 |
| StyI | CCWWGG | 1 cut(s) | 399 |
| TaaI | ACNGT | 5 cut(s) | 289, 371, 1059, 1672, 1842 |
| TaiI | ACGT | 3 cut(s) | 471, 1603, 1627 |
| TaqI | TCGA | 7 cut(s) | 26, 78, 252, 1014, 1187, 1265, 1400 |
| TasI | AATT | 8 cut(s) | 53, 60, 585, 632, 745, 774, 1250, 1644 |
| TatI | WGTACW | 1 cut(s) | 270 |
| TauI | GCSGC | 1 cut(s) | 1079 |
| Tru1I | TTAA | 7 cut(s) | 113, 263, 336, 777, 1170, 1526, 1911 |
| Tru9I | TTAA | 7 cut(s) | 113, 263, 336, 777, 1170, 1526, 1911 |
| TscAI | CASTG | 4 cut(s) | 891, 1432, 1449, 1677 |
| TseFI | GTSAC | 3 cut(s) | 979, 1214, 1882 |
| TseI | GCWGC | 5 cut(s) | 246, 437, 637, 925, 1961 |
| Tsp45I | GTSAC | 3 cut(s) | 979, 1214, 1882 |
| TspDTI | ATGAA | 6 cut(s) | 354, 644, 695, 851, 1054, 1938 |
| TspRI | CASTG | 4 cut(s) | 891, 1432, 1449, 1677 |
| XapI | RAATTY | 1 cut(s) | 60 |
| XbaI | TCTAGA | 2 cut(s) | 1240, 1705 |
| XmiI | GTMKAC | 1 cut(s) | 127 |
| XspI | CTAG | 9 cut(s) | 692, 771, 929, 1241, 1307, 1706, 1743, 1763, 1880 |
| ZraI | GACGTC | 1 cut(s) | 469 |
| Zsp2I | ATGCAT | 2 cut(s) | 836, 1261 |