RLG00000013603

Programmed cell death protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr3
OG0011088
Physical Location & Seq
Reverse (-)
33940487 .. 33943111
2625 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000013603

Sequence Viewer

Length: 2172 bp
ATGAGTGGAATGGAGTTCAGTGATGGTTTTGTCTCAAATGAGCATCGGGAGCTCCACCGTTCTGCCACAGAAAGTGCAGATCCATTATCTGCCTCTCCGCTGCACATTGGTCCAAAGTCTCCAAGGTCCCCAAAGTCCCCAAACTCTCCAAGGTCCCCAAAGGTGCAGGGAAAAACTGGAAAAGTTAGTCCACTCGCGCATGATAGGCATTCACATTCTTTTGTAGATGGGCGTCCTAAAAAGGGTGGTTCTGGGGGAAAAGGCACCTGGGGAGGGTTACTTGATACCAACGACAGTTGCACCGTTGACTCTAGTGACCCTAACTTTGATAGCAGTGAGGAATGTGAACAATCAAATGCAAAATCTGAGACAGTGGATTTTGAGGAATACAAAAAGAAAGCAACAGTAATAGTGGAGGAATTCTTTGCTACCGATGACATTACCTCCACTGCAAATGAACTAAGAGAACTTGATATGCCTAGCTATAGCTTCTACTTTGTAAAGAAACTTGTTTCCAAGGCTATGGATAGGCATGACAAGGAGAAAGAAATGGCTGCTGTTCTTTTATCTGCATTATATGCTGATTTCATTGATCCCCCACAGGTTTACAAAGGGTTCTGTAAATTGGTAGAATCTGCAGATGACTTGATTGTGGATATACCGGATACAGTTGATGTTCTTGCACTTTTCATTGCCCGAGCTGTTGTTGATGACATACTTCCTCCTGCATTTTTGAAAAAACAAATGAATTATTTACCTAAGGACTCAAAAGGGGTTGAAGTTTTGAAGAGAGCTGAGAAGGGCTACTTAGCAGCCCCTCTCCATGCTGAAATCATTGAGCGGCGGTGGGGAGGTAGCAAGAAGAGAACTGTTGAGGATGTTAAGGCTAAGATAAATAATTTGTTGATAGAGTATGTAGTCAGTGGTGACAAGAAAGAGGCTTGCAGATGCATCAAGGATTTGAAAGTTCCTTTTTTCCACCATGAAATAGTTAAGCGAGCTCTTGTAATGGCAATGGAGAGGCGGCAAGCTGAAGGCCGGCTACTAGATTTGCTGAAAGAAGCTGCTGAAGAAGGTTTAATCAACTCAAGCCAAGTATCAAAAGGCTTTGGTAGGATGATCGACTATGTTGATGACTTGTCGCTTGACATACCAAATGCCCGGGGAATATTACAGTCATTGATCTCTAAGGCAGCATCGGAGGGCTGGGTGTGTGCTTCGTCCTTAAAGTCACTCTCATTGGAGCCAGAAAAGCCATCATTAGAAGATAGTGTTGCCAGAGCTTTCAAGATGAAGGCTCAATCTATTATTCAAGAGTACTTCTTGTCTGGGGATATCTCAGAGGTAAGCAGTTGTCTAGAGTCAGAGAACAGTACTTGCTCGTCCGAACTGAATCCTATCTTTGTTAAAAGACTGATAACTCTAGCAATGGATCGGAAGAACAGGGAGAAGGAAATGGCATCCGTGTTGCTGTCTTCTCTATGTTTTCCAGCTGATGATGTTGTAAATGGGTTTGTAATGCTGATAGAATCCGCAGATGACACAGCTCTGGATAATCCTGTTGTTGTTGAAGACCTTGCAATGTTTCTTGCTAGATCAGTGGTGGATGAAGTTCTAGCCCCACAACATTTGGAAGAGATTGGAAGTCAGTGTGTGGCACCTGATTCAATCGGGAGCAAGGTTCTTAAAATGGCAAAGTCACTGCTAAAGGCCCGGCTTTCTGGGGAGCGAATACTAAGGTGTTGGGGTGGTGGAGGAAGCAGCAGGCCTGGATGGGCAGTTGAGGATGTCAAGGACAAGATTGGGAAGTTGCTAGAAGAGTTTGAGTCTGGAGGTGGCGTGAGGGAGGCTTGCCGCTGCATGAAGGAGTTAGGCATGCCATTTTTCAACCATGAGGTTGTCAAAAAAGCTTTGGTCAGCATTATGGAAAAGAAGAATGAAAGACTTTGGATTCTGCTCGAGGAATGTTTTGGCTCTGGACTCATAACAATGAACCAAATGACCAAGGGGTTCGGGAGAGTTGCAGAATCTCTAGATGATTTAGCTTTGGATGTTCCTGATGCCCAGAAACAATTCGCTCATTACATCGAACGAGCAAAGACTGCAGGGTGGTTGGATTCCTCATTTTGTTTCAGCAAATCTGGACATGTTACAGAGAATGGGACCTGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko05205 ko05206 map05205 map05206
Pfam Domains
Protein Families
MA3

Protein Analysis

724

Amino Acids

79.69

Weight (kDa)

5.46

Isoelectric Point (pI)

49.55

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MA3 PF02847 131 - 241 2e-21 MA3 domain
MA3 PF02847 295 - 403 6.3e-28 MA3 domain
MA3 PF02847 429 - 539 2e-18 MA3 domain
MA3 PF02847 597 - 706 2.3e-29 MA3 domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0011088)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G22730
fragaria_vesca FvH4_2g12790
malus_domestica MD05G1036500.v1.1 MD10G1038400.v1.1
prunus_persica Prupe.8G044800_v2.0.a1
pyrus_communis pycom05g02690 pycom10g02640 pycom10g02760
rosa_chinensis RchiOBHm_Chr6g0273671
rosa_laevigata RLG00000013603
rosa_multiflora Rmu_sc0002231.1_g000021
rosa_roxburghii Rroxscaffold_7G00195170
rosa_rugosa Rorug06G0076800 Rorug06G0076900 Rorug06G0077000
rosa_samantha Rh6AG191400 Rh6BG195400 Rh6CG194900 Rh6DG186800
rosa_wichuraiana Rw6G016750

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 263, 1657
AccBSI CCGCTC 1 cut(s) 841
AccII CGCG 1 cut(s) 197
AciI CCGC 6 cut(s) 98, 841, 844, 1024, 1533, 1855
AclWI GGATC 3 cut(s) 74, 587, 1440
AcsI RAATTY 1 cut(s) 419
AcuI CTGAAG 2 cut(s) 1053, 1089
AcyI GRCGYC 1 cut(s) 232
AfaI GTAC 2 cut(s) 1319, 1375
AfiI CCNNNNNNNGG 2 cut(s) 242, 273
AflIII ACRYGT 1 cut(s) 2146
AgsI TTSAA 9 cut(s) 736, 779, 787, 964, 1288, 1313, 1571, 1668, 1888
AjnI CCWGG 2 cut(s) 266, 1768
Alw21I GWGCWC 2 cut(s) 54, 1003
Alw26I GTCTC 3 cut(s) 37, 123, 362
AlwI GGATC 3 cut(s) 74, 587, 1440
Ama87I CYCGRG 3 cut(s) 696, 1161, 1958
AoxI GGCC 3 cut(s) 1036, 1710, 1766
ApeKI GCWGC 7 cut(s) 100, 554, 812, 1064, 1193, 1761, 1857
ApoI RAATTY 1 cut(s) 419
ArsI GACNNNNNNTTYG 2 cut(s) 308, 340
Asp700I GAANNNNTTC 1 cut(s) 2072
AspLEI GCGC 1 cut(s) 199
AspS9I GGNCC 5 cut(s) 110, 126, 153, 1711, 2163
AsuC2I CCSGG 3 cut(s) 1162, 1163, 1714
AsuHPI GGTGA 1 cut(s) 938
AvaI CYCGRG 3 cut(s) 696, 1161, 1958
AvaII GGWCC 4 cut(s) 110, 126, 153, 2163
AxyI CCTNAGG 1 cut(s) 759
BanI GGYRCC 2 cut(s) 263, 1657
BanII GRGCYC 2 cut(s) 54, 1003
BarI GAAGNNNNNNTAC 2 cut(s) 1026, 1058
BbsI GAAGAC 2 cut(s) 1467, 1578
Bbv12I GWGCWC 2 cut(s) 54, 1003
BbvI GCAGC 7 cut(s) 87, 541, 824, 1051, 1205, 1773, 1844
BccI CCATC 4 cut(s) 17, 221, 1264, 1767
BciT130I CCWGG 2 cut(s) 268, 1770
BciVI GTATCC 1 cut(s) 658
BcnI CCSGG 3 cut(s) 1162, 1163, 1714
BcoDI GTCTC 3 cut(s) 37, 123, 362
BfaI CTAG 9 cut(s) 312, 480, 1046, 1358, 1424, 1593, 1616, 1814, 2033
BfmI CTRYAG 3 cut(s) 484, 636, 2103
BfuI GTATCC 1 cut(s) 658
BmcAI AGTACT 2 cut(s) 1319, 1375
Bme1390I CCNGG 5 cut(s) 268, 1162, 1163, 1714, 1770
Bme18I GGWCC 4 cut(s) 110, 126, 153, 2163
BmeT110I CYCGRG 3 cut(s) 696, 1161, 1958
BmgT120I GGNCC 5 cut(s) 110, 126, 153, 1711, 2163
BmiI GGNNCC 6 cut(s) 128, 155, 265, 1245, 1659, 2164
BmrFI CCNGG 5 cut(s) 268, 1162, 1163, 1714, 1770
BmsI GCATC 6 cut(s) 52, 938, 960, 1205, 1469, 2050
BpiI GAAGAC 2 cut(s) 1467, 1578
BpmI CTGGAG 1 cut(s) 1851
BpuEI CTTGAG 1 cut(s) 1072
BpuMI CCSGG 3 cut(s) 1162, 1163, 1714
BsaHI GRCGYC 1 cut(s) 232
BsaJI CCNNGG 7 cut(s) 122, 149, 267, 516, 1161, 1162, 2004
BsaWI WCCGGW 1 cut(s) 661
BsaXI ACNNNNNCTCC 4 cut(s) 428, 458, 1824, 1854
Bsc4I CCNNNNNNNGG 2 cut(s) 242, 273
Bse118I RCCGGY 1 cut(s) 1038
Bse1I ACTGG 1 cut(s) 181
Bse21I CCTNAGG 1 cut(s) 759
Bse3DI GCAATG 4 cut(s) 690, 1020, 1434, 1587
BseBI CCWGG 2 cut(s) 268, 1770
BseDI CCNNGG 7 cut(s) 122, 149, 267, 516, 1161, 1162, 2004
BseGI GGATG 7 cut(s) 883, 1122, 1460, 1612, 1778, 1792, 2056
BseLI CCNNNNNNNGG 2 cut(s) 242, 273
BseMI GCAATG 4 cut(s) 690, 1020, 1434, 1587
BseMII CTCAG 3 cut(s) 357, 786, 1353
BseNI ACTGG 1 cut(s) 181
BseXI GCAGC 7 cut(s) 87, 541, 824, 1051, 1205, 1773, 1844
BseYI CCCAGC 1 cut(s) 1206
BsgI GTGCAG 3 cut(s) 86, 96, 185
Bsh1236I CGCG 1 cut(s) 197
BshFI GGCC 3 cut(s) 1038, 1712, 1768
BshNI GGYRCC 2 cut(s) 263, 1657
BsiHKAI GWGCWC 2 cut(s) 54, 1003
BsiHKCI CYCGRG 3 cut(s) 696, 1161, 1958
BsiSI CCGG 4 cut(s) 662, 1039, 1162, 1714
BslFI GGGAC 3 cut(s) 112, 121, 139
BslI CCNNNNNNNGG 2 cut(s) 242, 273
BsmAI GTCTC 3 cut(s) 37, 123, 362
BsmFI GGGAC 3 cut(s) 112, 121, 139
BsmI GAATGC 1 cut(s) 208
BsnI GGCC 3 cut(s) 1038, 1712, 1768
BsoBI CYCGRG 3 cut(s) 696, 1161, 1958
Bsp1286I GDGCHC 2 cut(s) 54, 1003
Bsp143I GATC 6 cut(s) 79, 592, 1119, 1182, 1432, 1595
BspACI CCGC 6 cut(s) 98, 841, 844, 1024, 1533, 1855
BspANI GGCC 3 cut(s) 1038, 1712, 1768
BspCNI CTCAG 3 cut(s) 358, 787, 1352
BspFNI CGCG 1 cut(s) 197
BspLI GGNNCC 6 cut(s) 128, 155, 265, 1245, 1659, 2164
BspMAI CTGCAG 2 cut(s) 640, 2107
BspPI GGATC 3 cut(s) 74, 587, 1440
BspT107I GGYRCC 2 cut(s) 263, 1657
BsrBI CCGCTC 1 cut(s) 841
BsrDI GCAATG 4 cut(s) 690, 1020, 1434, 1587
BsrFI RCCGGY 1 cut(s) 1038
BsrI ACTGG 1 cut(s) 181
BssAI RCCGGY 1 cut(s) 1038
BssECI CCNNGG 7 cut(s) 122, 149, 267, 516, 1161, 1162, 2004
BssMI GATC 6 cut(s) 79, 592, 1119, 1182, 1432, 1595
BssNI GRCGYC 1 cut(s) 232
BssT1I CCWWGG 4 cut(s) 122, 149, 516, 2004
Bst2UI CCWGG 2 cut(s) 268, 1770
Bst4CI ACNGT 9 cut(s) 59, 296, 304, 373, 406, 670, 871, 1176, 1373
Bst6I CTCTTC 4 cut(s) 782, 857, 1629, 1812
BstACI GRCGYC 1 cut(s) 232
BstAPI GCANNNNNTGC 2 cut(s) 578, 2102
BstC8I GCNNGC 7 cut(s) 943, 999, 1029, 1040, 1766, 1852, 1877
BstDEI CTNAG 9 cut(s) 366, 461, 759, 795, 808, 888, 1188, 1339, 1736
BstF5I GGATG 7 cut(s) 883, 1122, 1460, 1612, 1778, 1792, 2056
BstFNI CGCG 1 cut(s) 197
BstHHI GCGC 1 cut(s) 199
BstKTI GATC 6 cut(s) 82, 595, 1122, 1185, 1435, 1598
BstMAI GTCTC 3 cut(s) 37, 123, 362
BstMBI GATC 6 cut(s) 79, 592, 1119, 1182, 1432, 1595
BstMWI GCNNNNNNNGC 5 cut(s) 49, 205, 578, 1252, 2102
BstNI CCWGG 2 cut(s) 268, 1770
BstNSI RCATGY 2 cut(s) 1879, 2150
BstSCI CCNGG 5 cut(s) 266, 1160, 1161, 1712, 1768
BstSFI CTRYAG 3 cut(s) 484, 636, 2103
BstUI CGCG 1 cut(s) 197
BstV1I GCAGC 7 cut(s) 87, 541, 824, 1051, 1205, 1773, 1844
BstV2I GAAGAC 2 cut(s) 1467, 1578
BstX2I RGATCY 1 cut(s) 79
BstXI CCANNNNNNTGG 1 cut(s) 523
BstYI RGATCY 1 cut(s) 79
Bsu36I CCTNAGG 1 cut(s) 759
BsuI GTATCC 1 cut(s) 658
BsuRI GGCC 3 cut(s) 1038, 1712, 1768
BtsCI GGATG 7 cut(s) 883, 1122, 1460, 1612, 1778, 1792, 2056
BtsI GCAGTG 3 cut(s) 340, 447, 1700
BtsIMutI CAGTG 8 cut(s) 25, 340, 378, 447, 928, 1605, 1655, 1700
Cac8I GCNNGC 7 cut(s) 943, 999, 1029, 1040, 1766, 1852, 1877
CfoI GCGC 1 cut(s) 199
Cfr10I RCCGGY 1 cut(s) 1038
Cfr13I GGNCC 5 cut(s) 110, 126, 153, 1711, 2163
Cfr9I CCCGGG 1 cut(s) 1161
CseI GACGC 1 cut(s) 221
Csp6I GTAC 2 cut(s) 1318, 1374
CspCI CAANNNNNGTGG 2 cut(s) 1611, 1646
CviAII CATG 8 cut(s) 200, 533, 824, 983, 1861, 1876, 1892, 2147
CviQI GTAC 2 cut(s) 1318, 1374
DdeI CTNAG 9 cut(s) 366, 461, 759, 795, 808, 888, 1188, 1339, 1736
DpnI GATC 6 cut(s) 81, 594, 1121, 1184, 1434, 1597
DpnII GATC 6 cut(s) 79, 592, 1119, 1182, 1432, 1595
Eam1104I CTCTTC 4 cut(s) 782, 857, 1629, 1812
EarI CTCTTC 4 cut(s) 782, 857, 1629, 1812
Ecl136II GAGCTC 2 cut(s) 52, 1001
Eco130I CCWWGG 4 cut(s) 122, 149, 516, 2004
Eco147I AGGCCT 1 cut(s) 1768
Eco24I GRGCYC 2 cut(s) 54, 1003
Eco32I GATATC 1 cut(s) 1336
Eco47I GGWCC 4 cut(s) 110, 126, 153, 2163
Eco53kI GAGCTC 2 cut(s) 52, 1001
Eco57I CTGAAG 2 cut(s) 1053, 1089
Eco81I CCTNAGG 1 cut(s) 759
Eco88I CYCGRG 3 cut(s) 696, 1161, 1958
EcoICRI GAGCTC 2 cut(s) 52, 1001
EcoO109I RGGNCCY 3 cut(s) 126, 153, 2163
EcoRI GAATTC 1 cut(s) 419
EcoRII CCWGG 2 cut(s) 266, 1768
EcoRV GATATC 1 cut(s) 1336
EcoT14I CCWWGG 4 cut(s) 122, 149, 516, 2004
EcoT22I ATGCAT 1 cut(s) 953
EcoT38I GRGCYC 2 cut(s) 54, 1003
ErhI CCWWGG 4 cut(s) 122, 149, 516, 2004
FaeI CATG 8 cut(s) 203, 536, 827, 986, 1864, 1879, 1895, 2150
FalI AAGNNNNNCTT 2 cut(s) 791, 823
FaqI GGGAC 3 cut(s) 112, 121, 139
FatI CATG 8 cut(s) 199, 532, 823, 982, 1860, 1875, 1891, 2146
FokI GGATG 7 cut(s) 890, 1129, 1447, 1619, 1785, 1799, 2063
FriOI GRGCYC 2 cut(s) 54, 1003
FspBI CTAG 9 cut(s) 312, 480, 1046, 1358, 1424, 1593, 1616, 1814, 2033
GlaI GCGC 1 cut(s) 198
GsaI CCCAGC 1 cut(s) 1210
GsuI CTGGAG 1 cut(s) 1851
HaeIII GGCC 3 cut(s) 1038, 1712, 1768
HapII CCGG 4 cut(s) 662, 1039, 1162, 1714
HgaI GACGC 1 cut(s) 221
HhaI GCGC 1 cut(s) 199
Hin1I GRCGYC 1 cut(s) 232
Hin1II CATG 8 cut(s) 203, 536, 827, 986, 1864, 1879, 1895, 2150
Hin6I GCGC 1 cut(s) 197
HinP1I GCGC 1 cut(s) 197
HincII GTYRAC 1 cut(s) 307
HindII GTYRAC 1 cut(s) 307
HindIII AAGCTT 1 cut(s) 1908
HpaII CCGG 4 cut(s) 662, 1039, 1162, 1714
HphI GGTGA 1 cut(s) 938
Hpy166II GTNNAC 4 cut(s) 191, 307, 347, 607
Hpy188I TCNGA 6 cut(s) 367, 1201, 1342, 1366, 1387, 1437
Hpy8I GTNNAC 4 cut(s) 191, 307, 347, 607
HpyAV CCTTC 6 cut(s) 793, 1028, 1067, 1288, 1444, 1858
HpyCH4III ACNGT 9 cut(s) 59, 296, 304, 373, 406, 670, 871, 1176, 1373
HpyF10VI GCNNNNNNNGC 5 cut(s) 49, 205, 578, 1252, 2102
HpyF3I CTNAG 9 cut(s) 366, 461, 759, 795, 808, 888, 1188, 1339, 1736
Hsp92I GRCGYC 1 cut(s) 232
Hsp92II CATG 8 cut(s) 203, 536, 827, 986, 1864, 1879, 1895, 2150
HspAI GCGC 1 cut(s) 197
KroI GCCGGC 1 cut(s) 1038
KroNI GCCGGC 1 cut(s) 1040
Kzo9I GATC 6 cut(s) 79, 592, 1119, 1182, 1432, 1595
LmnI GCTCC 5 cut(s) 49, 57, 1243, 1674, 1726
Lsp1109I GCAGC 7 cut(s) 87, 541, 824, 1051, 1205, 1773, 1844
LweI GCATC 6 cut(s) 52, 938, 960, 1205, 1469, 2050
MaeI CTAG 9 cut(s) 312, 480, 1046, 1358, 1424, 1593, 1616, 1814, 2033
MaeIII GTNAC 6 cut(s) 276, 314, 926, 1230, 1698, 2149
MalI GATC 6 cut(s) 81, 594, 1121, 1184, 1434, 1597
MbiI CCGCTC 1 cut(s) 841
MboI GATC 6 cut(s) 79, 592, 1119, 1182, 1432, 1595
MflI RGATCY 1 cut(s) 79
MhlI GDGCHC 2 cut(s) 54, 1003
MluCI AATT 5 cut(s) 419, 623, 748, 898, 2072
MlyI GAGTC 5 cut(s) 302, 758, 1370, 1835, 1974
MmeI TCCRAC 1 cut(s) 2094
Mph1103I ATGCAT 1 cut(s) 953
MroNI GCCGGC 1 cut(s) 1038
MroXI GAANNNNTTC 1 cut(s) 2072
MseI TTAA 7 cut(s) 882, 993, 1079, 1226, 1407, 1686, 2170
MslI CAYNNNNRTG 1 cut(s) 1988
MspA1I CMGCKG 3 cut(s) 100, 1493, 1857
MspI CCGG 4 cut(s) 662, 1039, 1162, 1714
MspR9I CCNGG 5 cut(s) 268, 1162, 1163, 1714, 1770
Mva1269I GAATGC 1 cut(s) 208
MvaI CCWGG 2 cut(s) 268, 1770
MvnI CGCG 1 cut(s) 197
MwoI GCNNNNNNNGC 5 cut(s) 49, 205, 578, 1252, 2102
NaeI GCCGGC 1 cut(s) 1040
NciI CCSGG 3 cut(s) 1162, 1163, 1714
NdeII GATC 6 cut(s) 79, 592, 1119, 1182, 1432, 1595
NgoMIV GCCGGC 1 cut(s) 1038
NlaIII CATG 8 cut(s) 203, 536, 827, 986, 1864, 1879, 1895, 2150
NlaIV GGNNCC 6 cut(s) 128, 155, 265, 1245, 1659, 2164
NmuCI GTSAC 4 cut(s) 314, 926, 1230, 1698
NsiI ATGCAT 1 cut(s) 953
NspI RCATGY 2 cut(s) 1879, 2150
PaeI GCATGC 1 cut(s) 1879
PaeR7I CTCGAG 1 cut(s) 1958
PceI AGGCCT 1 cut(s) 1768
PciI ACATGT 1 cut(s) 2146
PctI GAATGC 1 cut(s) 208
PdiI GCCGGC 1 cut(s) 1040
PdmI GAANNNNTTC 1 cut(s) 2072
PfeI GAWTC 7 cut(s) 632, 1393, 1529, 1664, 1951, 2027, 2117
PleI GAGTC 5 cut(s) 302, 758, 1369, 1834, 1974
PpsI GAGTC 5 cut(s) 302, 758, 1369, 1834, 1974
PpuMI RGGWCCY 3 cut(s) 126, 153, 2163
PscI ACATGT 1 cut(s) 2146
Psp124BI GAGCTC 2 cut(s) 54, 1003
Psp5II RGGWCCY 3 cut(s) 126, 153, 2163
Psp6I CCWGG 2 cut(s) 266, 1768
PspFI CCCAGC 1 cut(s) 1206
PspGI CCWGG 2 cut(s) 266, 1768
PspN4I GGNNCC 6 cut(s) 128, 155, 265, 1245, 1659, 2164
PspPI GGNCC 5 cut(s) 110, 126, 153, 1711, 2163
PspPPI RGGWCCY 3 cut(s) 126, 153, 2163
PspXI VCTCGAGB 1 cut(s) 1958
PstI CTGCAG 2 cut(s) 640, 2107
PsuI RGATCY 1 cut(s) 79
PvuII CAGCTG 1 cut(s) 1493
RsaI GTAC 2 cut(s) 1319, 1375
RsaNI GTAC 2 cut(s) 1318, 1374
RseI CAYNNNNRTG 1 cut(s) 1988
SacI GAGCTC 2 cut(s) 54, 1003
SaqAI TTAA 7 cut(s) 882, 993, 1079, 1226, 1407, 1686, 2170
Sau3AI GATC 6 cut(s) 79, 592, 1119, 1182, 1432, 1595
Sau96I GGNCC 5 cut(s) 110, 126, 153, 1711, 2163
ScaI AGTACT 2 cut(s) 1319, 1375
SchI GAGTC 5 cut(s) 302, 758, 1370, 1835, 1974
ScrFI CCNGG 5 cut(s) 268, 1162, 1163, 1714, 1770
SduI GDGCHC 2 cut(s) 54, 1003
SfaNI GCATC 6 cut(s) 52, 938, 960, 1205, 1469, 2050
SfcI CTRYAG 3 cut(s) 484, 636, 2103
Sfr274I CTCGAG 1 cut(s) 1958
SinI GGWCC 4 cut(s) 110, 126, 153, 2163
SlaI CTCGAG 1 cut(s) 1958
SmaI CCCGGG 1 cut(s) 1163
SmiMI CAYNNNNRTG 1 cut(s) 1988
SmlI CTYRAG 2 cut(s) 1087, 1958
SmoI CTYRAG 2 cut(s) 1087, 1958
SphI GCATGC 1 cut(s) 1879
Sse9I AATT 5 cut(s) 419, 623, 748, 898, 2072
SseBI AGGCCT 1 cut(s) 1768
SsiI CCGC 6 cut(s) 98, 841, 844, 1024, 1533, 1855
SspI AATATT 1 cut(s) 1170
SspMI CTAG 9 cut(s) 312, 480, 1046, 1358, 1424, 1593, 1616, 1814, 2033
SstI GAGCTC 2 cut(s) 54, 1003
StuI AGGCCT 1 cut(s) 1768
StyD4I CCNGG 5 cut(s) 266, 1160, 1161, 1712, 1768
StyI CCWWGG 4 cut(s) 122, 149, 516, 2004
TaaI ACNGT 9 cut(s) 59, 296, 304, 373, 406, 670, 871, 1176, 1373
TaqI TCGA 3 cut(s) 1122, 1959, 2088
TasI AATT 5 cut(s) 419, 623, 748, 898, 2072
TatI WGTACW 2 cut(s) 1317, 1373
TauI GCSGC 3 cut(s) 844, 1027, 1857
TfiI GAWTC 7 cut(s) 632, 1393, 1529, 1664, 1951, 2027, 2117
Tru1I TTAA 7 cut(s) 882, 993, 1079, 1226, 1407, 1686, 2170
Tru9I TTAA 7 cut(s) 882, 993, 1079, 1226, 1407, 1686, 2170
TscAI CASTG 8 cut(s) 25, 340, 378, 454, 928, 1605, 1655, 1707
TseFI GTSAC 4 cut(s) 314, 926, 1230, 1698
TseI GCWGC 7 cut(s) 100, 554, 812, 1064, 1193, 1761, 1857
Tsp45I GTSAC 4 cut(s) 314, 926, 1230, 1698
TspGWI ACGGA 1 cut(s) 1453
TspMI CCCGGG 1 cut(s) 1161
TspRI CASTG 8 cut(s) 25, 340, 378, 454, 928, 1605, 1655, 1707
VpaK11BI GGWCC 4 cut(s) 110, 126, 153, 2163
XapI RAATTY 1 cut(s) 419
XbaI TCTAGA 2 cut(s) 1357, 2032
XceI RCATGY 2 cut(s) 1879, 2150
XhoI CTCGAG 1 cut(s) 1958
XmaI CCCGGG 1 cut(s) 1161
XmnI GAANNNNTTC 1 cut(s) 2072
XspI CTAG 9 cut(s) 312, 480, 1046, 1358, 1424, 1593, 1616, 1814, 2033
ZrmI AGTACT 2 cut(s) 1319, 1375
Zsp2I ATGCAT 1 cut(s) 953
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.