Prupe.8G044800_v2.0.a1

Programmed cell death protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
OG0011088
Physical Location & Seq
Reverse (-)
4648380 .. 4652908
4529 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.8G044800.1

Sequence Viewer

Length: 2190 bp
ATGGACTTCAGTGATGGGTTTGTATCAAAAGAGCATCTGGAGCTTCACCGATCTGCTTCAGAAAGTGCAGATCCATTATCTGTGTCTCCACTGCACATTTCTCCAAGGTCTCCAAGGTCTCCAAGGTCTCCAAAGTCCCCAAAAACTCCCAAGTCCCCCAAGTCTCCAAGGTCTCCAAAGATGCAGGGCAAACATGGAAAAGGAAGCCCACTCAAGCAAGATAGGCATTCACATTCTTCAGTAGATGGGCGTCCTAAAAAGGGTGGTTGTGGGGGTAAAGGCACCTGGGGAGGGTTACTTGATACAGATGAAAATGACGTTCTTGACCCAAATGACCCAAACTTCAATAGCAGTGAGGAATGTGAAAATCCAATTGCAAAAAAAGAGAGGGTCGACTTTGAGGAGTACAAAAAGAAAGCTACAATAATAGTGGAGGAATACTTTACTACTGATGACATTACCTCAACTGCAAATGAATTTAGAGAACTTGATAGACCTAACTACAGCTATTATTTTGTAAAGAAGCTTGTCTCTAAGGCTATGGATAGGCATGACAAAGAGAAAGAAATGGCTGCTGTTCTTTTATCTGCACTATATGCTGAATTCATTGATCCCCCACAAGTTTACAAAGGTTTCTGTAAACTGGTAGAATGCGCAGATGACTTGATTGTGGATATCCCAGATACAGTTGATGTTCTTGCACTGTTCATTGCCCGGGCTGTGGTTGATGACATACTTCCTCCTGCATTCCTAAAAAAAGAAATGAATTACTTACCTAAAGATTCAAAGGGTGTTGAAGTCTTGAAAAGAGCTGACAAGGGCTACTTAGCAGCACCACTTCATGCAGAAATCATTGAGCGGCGATGGGGAGGTAGCAAAAAAAGGACCGTTGAGGATGTTAAGGCCAAGATAAACAATTTGTTGATAGAGTACGTAGTGAGTGGTGATAAGAAAGAGGCATGCAGATGCATCAAGGATTTGAAAGTTCCTTTTTTCCATCATGAAATAGTTAAACGAGCTCTTGTAATGGCAATGGAGAGGCGGCAAGCTGAAGGCCGGCTACTAGATCTGCTGAAAGAAGCTGCTGAAGAGGGTTTAATTAACTCGAGCCAAGTATCAAAAGGCTTTGGTAGGATGATTGACTATGTTGATGACTTATCACTGGACATACCAAATGCGCGGGGCATTTTGCAGTCATTGATCTCTAAGGCAGCATCAGAAGGCTGGTTGTGTGCTTCATCTTTGAAGTCACTCTCTTTGGAGCCAGAAAAGCGATCATTAGAAGATAGTGTTGCCAGAATTTTCAAGACAAAGGCTCAATCTATTATTCAAGAGTACTTCTTGTCTGGGGATATCTTAGAGGTAAACAGTTGTCTAGAGTCAGAGAACAGTACTTATTCGTCTGAGCTGAATGCTATCTTTGTTAAAAGATTGATAACTCTAGCAATGGATCGGAAGAATAGGGAGAAGGAAATGGCATCAGTCTTACTGTCATCCCTGTGTTTTCCAGCTGATGATGTTGTGAATGGGTTTGTAATGCTGATAGAATCAGCAGATGACACAGCTCTGGATAATCCAGTTGTGGTTGAGGATCTTGCAATGTTTCTTGCTAGGTCTGTGGTGGATGAAGTCCTAGCCCCACAACACTTGGAAGAGATTGGAAGTCAGTGCGCGGCACCAGAGTCCATTGGGAGCAAGGTTCTTAAAATGGCAAAGTCATTGCTAAAGGCTCGACTTTCTGGGGAGCGGATACTAAGGTGTTGGGGTGGTGGAGGAAGCAGCAGACCTGGATGGGCAGTTGAGGACGTTAAGGACAAGATTGGAAAGTTGCTAGAAGAGTTTGAGTCTGGAGGGGGCGTCAGAGAGGCTTGCCGGTGCATGAAGGAATTAGGCATGCCATTTTTCAATCATGAGGTTGTCAAAAAAGCTTTGGTGGCAATTATGGAAAAGAAGAATGAAAGACTTTGGATTTTGCTTGAGGAATGTTTTGGCTCTGGACTCATAACAATGAACCAAATGACAAAGGGGTTTGGGAGAGTAGCAGAGTCTCTAGAAGACTTGGCTTTGGATGTCCCTGATGTCCAGAAGCAGTTTACCCGTTATGTTGAGCGAGCGAAGAATGCAGGGTGGTTGGATTCCTCATTTAGTTTCAGCAAATCAGGACACATTACAGAGAATGGCACTGGCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko05205 ko05206 map05205 map05206
Pfam Domains
Protein Families
MA3

Protein Analysis

730

Amino Acids

81.03

Weight (kDa)

5.89

Isoelectric Point (pI)

49.11

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0011088)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G22730
fragaria_vesca FvH4_2g12790
malus_domestica MD05G1036500.v1.1 MD10G1038400.v1.1
prunus_persica Prupe.8G044800_v2.0.a1
pyrus_communis pycom05g02690 pycom10g02640 pycom10g02760
rosa_chinensis RchiOBHm_Chr6g0273671
rosa_laevigata RLG00000013603
rosa_multiflora Rmu_sc0002231.1_g000021
rosa_roxburghii Rroxscaffold_7G00195170
rosa_rugosa Rorug06G0076800 Rorug06G0076900 Rorug06G0077000
rosa_samantha Rh6AG191400 Rh6BG195400 Rh6CG194900 Rh6DG186800
rosa_wichuraiana Rw6G016750

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 655
AccB1I GGYRCC 2 cut(s) 281, 1675
AccBSI CCGCTC 2 cut(s) 859, 1747
AccI GTMKAC 1 cut(s) 393
AccII CGCG 2 cut(s) 1180, 1673
AciI CCGC 5 cut(s) 859, 1042, 1180, 1673, 1747
AclWI GGATC 4 cut(s) 65, 605, 1458, 1599
AcsI RAATTY 3 cut(s) 476, 602, 1299
AcuI CTGAAG 4 cut(s) 42, 222, 1071, 1107
AcyI GRCGYC 2 cut(s) 250, 1857
AfaI GTAC 4 cut(s) 407, 932, 1337, 1393
AfiI CCNNNNNNNGG 3 cut(s) 260, 291, 721
AgsI TTSAA 9 cut(s) 346, 786, 797, 805, 982, 1246, 1306, 1331, 1906
AjnI CCWGG 2 cut(s) 284, 1786
Alw21I GWGCWC 1 cut(s) 1021
Alw26I GTCTC 8 cut(s) 90, 114, 123, 132, 168, 177, 535, 2052
AlwI GGATC 4 cut(s) 65, 605, 1458, 1599
Ama87I CYCGRG 2 cut(s) 714, 1105
AoxI GGCC 2 cut(s) 903, 1054
ApeKI GCWGC 5 cut(s) 572, 830, 1082, 1211, 1779
ApoI RAATTY 3 cut(s) 476, 602, 1299
AspLEI GCGC 3 cut(s) 656, 1180, 1673
AspS9I GGNCC 1 cut(s) 885
AsuC2I CCSGG 2 cut(s) 715, 716
AsuHPI GGTGA 2 cut(s) 38, 956
AvaI CYCGRG 2 cut(s) 714, 1105
AvaII GGWCC 1 cut(s) 885
BaeI ACNNNNGTAYC 2 cut(s) 1742, 1775
BanI GGYRCC 2 cut(s) 281, 1675
BanII GRGCYC 1 cut(s) 1021
BarI GAAGNNNNNNTAC 2 cut(s) 1044, 1076
BbsI GAAGAC 1 cut(s) 2061
Bbv12I GWGCWC 1 cut(s) 1021
BbvI GCAGC 5 cut(s) 559, 842, 1069, 1223, 1791
BccI CCATC 5 cut(s) 8, 239, 858, 1005, 1785
BciT130I CCWGG 2 cut(s) 286, 1788
BciVI GTATCC 1 cut(s) 1743
BcnI CCSGG 2 cut(s) 715, 716
BcoDI GTCTC 8 cut(s) 90, 114, 123, 132, 168, 177, 535, 2052
BfaI CTAG 7 cut(s) 1064, 1376, 1442, 1611, 1634, 1832, 2051
BfmI CTRYAG 1 cut(s) 502
BfuI GTATCC 1 cut(s) 1743
BglII AGATCT 1 cut(s) 1066
BisI GCNGC 8 cut(s) 573, 831, 860, 1043, 1083, 1212, 1674, 1780
BlsI GCNGC 8 cut(s) 574, 832, 861, 1044, 1084, 1213, 1675, 1781
BmcAI AGTACT 2 cut(s) 1337, 1393
Bme1390I CCNGG 4 cut(s) 286, 715, 716, 1788
Bme18I GGWCC 1 cut(s) 885
BmeT110I CYCGRG 2 cut(s) 714, 1105
BmgT120I GGNCC 1 cut(s) 885
BmiI GGNNCC 3 cut(s) 283, 1263, 1677
BmrFI CCNGG 4 cut(s) 286, 715, 716, 1788
BmsI GCATC 6 cut(s) 43, 171, 956, 978, 1223, 1487
BpiI GAAGAC 1 cut(s) 2061
BpmI CTGGAG 2 cut(s) 59, 1869
BpuEI CTTGAG 2 cut(s) 197, 1997
BpuMI CCSGG 2 cut(s) 715, 716
BsaAI YACGTR 1 cut(s) 934
BsaHI GRCGYC 2 cut(s) 250, 1857
BsaI GGTCTC 4 cut(s) 114, 123, 132, 177
BsaJI CCNNGG 6 cut(s) 104, 113, 122, 167, 285, 714
BsaXI ACNNNNNCTCC 2 cut(s) 1842, 1872
Bsc4I CCNNNNNNNGG 3 cut(s) 260, 291, 721
Bse118I RCCGGY 2 cut(s) 1056, 1872
Bse1I ACTGG 4 cut(s) 648, 1167, 1577, 2188
Bse3DI GCAATG 5 cut(s) 708, 1038, 1452, 1605, 1718
BseBI CCWGG 2 cut(s) 286, 1788
BseDI CCNNGG 6 cut(s) 104, 113, 122, 167, 285, 714
BseGI GGATG 6 cut(s) 901, 1140, 1493, 1630, 1796, 2074
BseLI CCNNNNNNNGG 3 cut(s) 260, 291, 721
BseMI GCAATG 5 cut(s) 708, 1038, 1452, 1605, 1718
BseMII CTCAG 1 cut(s) 1395
BseNI ACTGG 4 cut(s) 648, 1167, 1577, 2188
BseRI GAGGAG 1 cut(s) 416
BseXI GCAGC 5 cut(s) 559, 842, 1069, 1223, 1791
BsgI GTGCAG 3 cut(s) 77, 87, 573
Bsh1236I CGCG 2 cut(s) 1180, 1673
BshFI GGCC 2 cut(s) 905, 1056
BshNI GGYRCC 2 cut(s) 281, 1675
BsiHKAI GWGCWC 1 cut(s) 1021
BsiHKCI CYCGRG 2 cut(s) 714, 1105
BsiSI CCGG 3 cut(s) 715, 1057, 1873
BslFI GGGAC 3 cut(s) 121, 139, 2057
BslI CCNNNNNNNGG 3 cut(s) 260, 291, 721
BsmAI GTCTC 8 cut(s) 90, 114, 123, 132, 168, 177, 535, 2052
BsmFI GGGAC 3 cut(s) 121, 139, 2057
BsmI GAATGC 5 cut(s) 226, 656, 746, 1417, 2125
BsnI GGCC 2 cut(s) 905, 1056
Bso31I GGTCTC 4 cut(s) 114, 123, 132, 177
BsoBI CYCGRG 2 cut(s) 714, 1105
Bsp1286I GDGCHC 1 cut(s) 1021
Bsp143I GATC 8 cut(s) 50, 70, 610, 1066, 1200, 1274, 1450, 1591
BspACI CCGC 5 cut(s) 859, 1042, 1180, 1673, 1747
BspANI GGCC 2 cut(s) 905, 1056
BspCNI CTCAG 1 cut(s) 1396
BspFNI CGCG 2 cut(s) 1180, 1673
BspHI TCATGA 2 cut(s) 1000, 1909
BspLI GGNNCC 3 cut(s) 283, 1263, 1677
BspPI GGATC 4 cut(s) 65, 605, 1458, 1599
BspT107I GGYRCC 2 cut(s) 281, 1675
BspTNI GGTCTC 4 cut(s) 114, 123, 132, 177
BsrBI CCGCTC 2 cut(s) 859, 1747
BsrDI GCAATG 5 cut(s) 708, 1038, 1452, 1605, 1718
BsrFI RCCGGY 2 cut(s) 1056, 1872
BsrI ACTGG 4 cut(s) 648, 1167, 1577, 2188
BssAI RCCGGY 2 cut(s) 1056, 1872
BssECI CCNNGG 6 cut(s) 104, 113, 122, 167, 285, 714
BssMI GATC 8 cut(s) 50, 70, 610, 1066, 1200, 1274, 1450, 1591
BssNI GRCGYC 2 cut(s) 250, 1857
BssT1I CCWWGG 4 cut(s) 104, 113, 122, 167
Bst2UI CCWGG 2 cut(s) 286, 1788
Bst4CI ACNGT 6 cut(s) 688, 705, 889, 1370, 1391, 1491
Bst6I CTCTTC 3 cut(s) 1083, 1647, 1830
BstACI GRCGYC 2 cut(s) 250, 1857
BstAPI GCANNNNNTGC 1 cut(s) 596
BstBAI YACGTR 1 cut(s) 934
BstC8I GCNNGC 6 cut(s) 961, 1047, 1058, 1870, 1895, 2112
BstDEI CTNAG 6 cut(s) 534, 826, 1206, 1357, 1404, 1754
BstF5I GGATG 6 cut(s) 901, 1140, 1493, 1630, 1796, 2074
BstFNI CGCG 2 cut(s) 1180, 1673
BstHHI GCGC 3 cut(s) 656, 1180, 1673
BstKTI GATC 8 cut(s) 53, 73, 613, 1069, 1203, 1277, 1453, 1594
BstMAI GTCTC 8 cut(s) 90, 114, 123, 132, 168, 177, 535, 2052
BstMBI GATC 8 cut(s) 50, 70, 610, 1066, 1200, 1274, 1450, 1591
BstMWI GCNNNNNNNGC 6 cut(s) 40, 223, 596, 1270, 1934, 2120
BstNI CCWGG 2 cut(s) 286, 1788
BstNSI RCATGY 2 cut(s) 963, 1897
BstSCI CCNGG 4 cut(s) 284, 713, 714, 1786
BstSFI CTRYAG 1 cut(s) 502
BstSNI TACGTA 1 cut(s) 934
BstUI CGCG 2 cut(s) 1180, 1673
BstV1I GCAGC 5 cut(s) 559, 842, 1069, 1223, 1791
BstV2I GAAGAC 1 cut(s) 2061
BstX2I RGATCY 3 cut(s) 70, 1066, 1591
BstYI RGATCY 3 cut(s) 70, 1066, 1591
BsuI GTATCC 1 cut(s) 1743
BsuRI GGCC 2 cut(s) 905, 1056
BtgZI GCGATG 1 cut(s) 877
BtsCI GGATG 6 cut(s) 901, 1140, 1493, 1630, 1796, 2074
BtsI GCAGTG 2 cut(s) 89, 358
BtsIMutI CAGTG 7 cut(s) 16, 89, 358, 701, 1160, 1673, 2181
Cac8I GCNNGC 6 cut(s) 961, 1047, 1058, 1870, 1895, 2112
CciI TCATGA 2 cut(s) 1000, 1909
CfoI GCGC 3 cut(s) 656, 1180, 1673
Cfr10I RCCGGY 2 cut(s) 1056, 1872
Cfr13I GGNCC 1 cut(s) 885
Cfr9I CCCGGG 1 cut(s) 714
CseI GACGC 2 cut(s) 239, 1846
Csp6I GTAC 4 cut(s) 406, 931, 1336, 1392
CspCI CAANNNNNGTGG 4 cut(s) 411, 446, 1629, 1664
CviAII CATG 8 cut(s) 194, 551, 842, 960, 1001, 1879, 1894, 1910
CviQI GTAC 4 cut(s) 406, 931, 1336, 1392
DdeI CTNAG 6 cut(s) 534, 826, 1206, 1357, 1404, 1754
DpnI GATC 8 cut(s) 52, 72, 612, 1068, 1202, 1276, 1452, 1593
DpnII GATC 8 cut(s) 50, 70, 610, 1066, 1200, 1274, 1450, 1591
Eam1104I CTCTTC 3 cut(s) 1083, 1647, 1830
EarI CTCTTC 3 cut(s) 1083, 1647, 1830
Ecl136II GAGCTC 1 cut(s) 1019
Eco105I TACGTA 1 cut(s) 934
Eco130I CCWWGG 4 cut(s) 104, 113, 122, 167
Eco24I GRGCYC 1 cut(s) 1021
Eco31I GGTCTC 4 cut(s) 114, 123, 132, 177
Eco32I GATATC 2 cut(s) 676, 1354
Eco47I GGWCC 1 cut(s) 885
Eco53kI GAGCTC 1 cut(s) 1019
Eco57I CTGAAG 4 cut(s) 42, 222, 1071, 1107
Eco88I CYCGRG 2 cut(s) 714, 1105
EcoICRI GAGCTC 1 cut(s) 1019
EcoRI GAATTC 1 cut(s) 602
EcoRII CCWGG 2 cut(s) 284, 1786
EcoRV GATATC 2 cut(s) 676, 1354
EcoT14I CCWWGG 4 cut(s) 104, 113, 122, 167
EcoT22I ATGCAT 1 cut(s) 971
EcoT38I GRGCYC 1 cut(s) 1021
ErhI CCWWGG 4 cut(s) 104, 113, 122, 167
FaeI CATG 8 cut(s) 197, 554, 845, 963, 1004, 1882, 1897, 1913
FalI AAGNNNNNCTT 2 cut(s) 809, 841
FaqI GGGAC 3 cut(s) 121, 139, 2057
FatI CATG 8 cut(s) 193, 550, 841, 959, 1000, 1878, 1893, 1909
FauI CCCGC 1 cut(s) 1173
FblI GTMKAC 1 cut(s) 393
Fnu4HI GCNGC 8 cut(s) 573, 831, 860, 1043, 1083, 1212, 1674, 1780
FokI GGATG 6 cut(s) 908, 1147, 1480, 1637, 1803, 2081
FriOI GRGCYC 1 cut(s) 1021
Fsp4HI GCNGC 8 cut(s) 573, 831, 860, 1043, 1083, 1212, 1674, 1780
FspBI CTAG 7 cut(s) 1064, 1376, 1442, 1611, 1634, 1832, 2051
FspI TGCGCA 1 cut(s) 655
GlaI GCGC 3 cut(s) 655, 1179, 1672
GluI GCNGC 8 cut(s) 573, 831, 860, 1043, 1083, 1212, 1674, 1780
GsuI CTGGAG 2 cut(s) 59, 1869
HaeIII GGCC 2 cut(s) 905, 1056
HapII CCGG 3 cut(s) 715, 1057, 1873
HgaI GACGC 2 cut(s) 239, 1846
HhaI GCGC 3 cut(s) 656, 1180, 1673
Hin1I GRCGYC 2 cut(s) 250, 1857
Hin1II CATG 8 cut(s) 197, 554, 845, 963, 1004, 1882, 1897, 1913
Hin6I GCGC 3 cut(s) 654, 1178, 1671
HinP1I GCGC 3 cut(s) 654, 1178, 1671
HincII GTYRAC 1 cut(s) 394
HindII GTYRAC 1 cut(s) 394
HindIII AAGCTT 2 cut(s) 524, 1926
HinfI GANTC 8 cut(s) 782, 1379, 1547, 1682, 1844, 1998, 2045, 2135
HpaII CCGG 3 cut(s) 715, 1057, 1873
HphI GGTGA 2 cut(s) 38, 956
Hpy166II GTNNAC 5 cut(s) 394, 625, 641, 1366, 2094
Hpy188I TCNGA 6 cut(s) 61, 1219, 1384, 1405, 1455, 1862
Hpy8I GTNNAC 5 cut(s) 394, 625, 641, 1366, 2094
HpyAV CCTTC 4 cut(s) 1046, 1214, 1462, 1876
HpyCH4III ACNGT 6 cut(s) 688, 705, 889, 1370, 1391, 1491
HpyCH4IV ACGT 3 cut(s) 318, 933, 1806
HpyF10VI GCNNNNNNNGC 6 cut(s) 40, 223, 596, 1270, 1934, 2120
HpyF3I CTNAG 6 cut(s) 534, 826, 1206, 1357, 1404, 1754
HpySE526I ACGT 3 cut(s) 318, 933, 1806
Hsp92I GRCGYC 2 cut(s) 250, 1857
Hsp92II CATG 8 cut(s) 197, 554, 845, 963, 1004, 1882, 1897, 1913
HspAI GCGC 3 cut(s) 654, 1178, 1671
KroI GCCGGC 1 cut(s) 1056
KroNI GCCGGC 1 cut(s) 1058
Kzo9I GATC 8 cut(s) 50, 70, 610, 1066, 1200, 1274, 1450, 1591
LmnI GCTCC 4 cut(s) 40, 1261, 1692, 1744
Lsp1109I GCAGC 5 cut(s) 559, 842, 1069, 1223, 1791
LweI GCATC 6 cut(s) 43, 171, 956, 978, 1223, 1487
MaeI CTAG 7 cut(s) 1064, 1376, 1442, 1611, 1634, 1832, 2051
MaeII ACGT 3 cut(s) 318, 933, 1806
MaeIII GTNAC 2 cut(s) 294, 1248
MalI GATC 8 cut(s) 52, 72, 612, 1068, 1202, 1276, 1452, 1593
MbiI CCGCTC 2 cut(s) 859, 1747
MboI GATC 8 cut(s) 50, 70, 610, 1066, 1200, 1274, 1450, 1591
MboII GAAGA 9 cut(s) 228, 1100, 1295, 1468, 1664, 1847, 1963, 2066, 2128
MfeI CAATTG 1 cut(s) 372
MflI RGATCY 3 cut(s) 70, 1066, 1591
MhlI GDGCHC 1 cut(s) 1021
MluCI AATT 9 cut(s) 372, 476, 602, 766, 916, 1098, 1299, 1886, 1938
MlyI GAGTC 5 cut(s) 1388, 1691, 1853, 1992, 2054
MmeI TCCRAC 1 cut(s) 2112
Mph1103I ATGCAT 1 cut(s) 971
MroNI GCCGGC 1 cut(s) 1056
MseI TTAA 7 cut(s) 900, 1011, 1097, 1101, 1425, 1704, 1809
MslI CAYNNNNRTG 3 cut(s) 964, 1498, 2006
MspA1I CMGCKG 1 cut(s) 1511
MspI CCGG 3 cut(s) 715, 1057, 1873
MspR9I CCNGG 4 cut(s) 286, 715, 716, 1788
MunI CAATTG 1 cut(s) 372
Mva1269I GAATGC 5 cut(s) 226, 656, 746, 1417, 2125
MvaI CCWGG 2 cut(s) 286, 1788
MvnI CGCG 2 cut(s) 1180, 1673
MwoI GCNNNNNNNGC 6 cut(s) 40, 223, 596, 1270, 1934, 2120
NaeI GCCGGC 1 cut(s) 1058
NciI CCSGG 2 cut(s) 715, 716
NdeII GATC 8 cut(s) 50, 70, 610, 1066, 1200, 1274, 1450, 1591
NgoMIV GCCGGC 1 cut(s) 1056
NlaIII CATG 8 cut(s) 197, 554, 845, 963, 1004, 1882, 1897, 1913
NlaIV GGNNCC 3 cut(s) 283, 1263, 1677
NmuCI GTSAC 1 cut(s) 1248
NsbI TGCGCA 1 cut(s) 655
NsiI ATGCAT 1 cut(s) 971
NspI RCATGY 2 cut(s) 963, 1897
PacI TTAATTAA 1 cut(s) 1101
PaeI GCATGC 2 cut(s) 963, 1897
PaeR7I CTCGAG 1 cut(s) 1105
PagI TCATGA 2 cut(s) 1000, 1909
PctI GAATGC 5 cut(s) 226, 656, 746, 1417, 2125
PdiI GCCGGC 1 cut(s) 1058
PfeI GAWTC 3 cut(s) 782, 1547, 2135
PkrI GCNGC 8 cut(s) 574, 832, 861, 1044, 1084, 1213, 1675, 1781
PleI GAGTC 5 cut(s) 1387, 1690, 1852, 1992, 2053
PpsI GAGTC 5 cut(s) 1387, 1690, 1852, 1992, 2053
Ppu21I YACGTR 1 cut(s) 934
Psp124BI GAGCTC 1 cut(s) 1021
Psp6I CCWGG 2 cut(s) 284, 1786
PspGI CCWGG 2 cut(s) 284, 1786
PspN4I GGNNCC 3 cut(s) 283, 1263, 1677
PspPI GGNCC 1 cut(s) 885
PspXI VCTCGAGB 1 cut(s) 1105
PsuI RGATCY 3 cut(s) 70, 1066, 1591
PvuII CAGCTG 1 cut(s) 1511
RsaI GTAC 4 cut(s) 407, 932, 1337, 1393
RsaNI GTAC 4 cut(s) 406, 931, 1336, 1392
RseI CAYNNNNRTG 3 cut(s) 964, 1498, 2006
SacI GAGCTC 1 cut(s) 1021
SalI GTCGAC 1 cut(s) 392
SaqAI TTAA 7 cut(s) 900, 1011, 1097, 1101, 1425, 1704, 1809
SatI GCNGC 8 cut(s) 573, 831, 860, 1043, 1083, 1212, 1674, 1780
Sau3AI GATC 8 cut(s) 50, 70, 610, 1066, 1200, 1274, 1450, 1591
Sau96I GGNCC 1 cut(s) 885
ScaI AGTACT 2 cut(s) 1337, 1393
SchI GAGTC 5 cut(s) 1388, 1691, 1853, 1992, 2054
ScrFI CCNGG 4 cut(s) 286, 715, 716, 1788
SduI GDGCHC 1 cut(s) 1021
SfaNI GCATC 6 cut(s) 43, 171, 956, 978, 1223, 1487
SfcI CTRYAG 1 cut(s) 502
Sfr274I CTCGAG 1 cut(s) 1105
SinI GGWCC 1 cut(s) 885
SlaI CTCGAG 1 cut(s) 1105
SmaI CCCGGG 1 cut(s) 716
SmiMI CAYNNNNRTG 3 cut(s) 964, 1498, 2006
SmlI CTYRAG 3 cut(s) 212, 1105, 1976
SmoI CTYRAG 3 cut(s) 212, 1105, 1976
SnaBI TACGTA 1 cut(s) 934
SphI GCATGC 2 cut(s) 963, 1897
SrfI GCCCGGGC 1 cut(s) 716
Sse9I AATT 9 cut(s) 372, 476, 602, 766, 916, 1098, 1299, 1886, 1938
SsiI CCGC 5 cut(s) 859, 1042, 1180, 1673, 1747
SspMI CTAG 7 cut(s) 1064, 1376, 1442, 1611, 1634, 1832, 2051
SstI GAGCTC 1 cut(s) 1021
StyD4I CCNGG 4 cut(s) 284, 713, 714, 1786
StyI CCWWGG 4 cut(s) 104, 113, 122, 167
TaaI ACNGT 6 cut(s) 688, 705, 889, 1370, 1391, 1491
TaiI ACGT 3 cut(s) 321, 936, 1809
TaqI TCGA 3 cut(s) 393, 1106, 1732
TasI AATT 9 cut(s) 372, 476, 602, 766, 916, 1098, 1299, 1886, 1938
TatI WGTACW 3 cut(s) 405, 1335, 1391
TauI GCSGC 3 cut(s) 862, 1045, 1676
TfiI GAWTC 3 cut(s) 782, 1547, 2135
Tru1I TTAA 7 cut(s) 900, 1011, 1097, 1101, 1425, 1704, 1809
Tru9I TTAA 7 cut(s) 900, 1011, 1097, 1101, 1425, 1704, 1809
TscAI CASTG 7 cut(s) 16, 96, 358, 708, 1167, 1673, 2188
TseFI GTSAC 1 cut(s) 1248
TseI GCWGC 5 cut(s) 572, 830, 1082, 1211, 1779
Tsp45I GTSAC 1 cut(s) 1248
TspMI CCCGGG 1 cut(s) 714
TspRI CASTG 7 cut(s) 16, 96, 358, 708, 1167, 1673, 2188
VpaK11BI GGWCC 1 cut(s) 885
XapI RAATTY 3 cut(s) 476, 602, 1299
XbaI TCTAGA 2 cut(s) 1375, 2050
XceI RCATGY 2 cut(s) 963, 1897
XhoI CTCGAG 1 cut(s) 1105
XmaI CCCGGG 1 cut(s) 714
XmiI GTMKAC 1 cut(s) 393
XspI CTAG 7 cut(s) 1064, 1376, 1442, 1611, 1634, 1832, 2051
ZrmI AGTACT 2 cut(s) 1337, 1393
Zsp2I ATGCAT 1 cut(s) 971
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.