MD05G1036500.v1.1

Programmed cell death protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr05
OG0011088
Physical Location & Seq
Reverse (-)
5883640 .. 5887767
4128 bp
Loading structure...
UTR
Exon/CDS
Intron
MD05G1036500.v1.1.491

Sequence Viewer

Length: 2166 bp
ATGGACTTCAGTGATGGGTTTGTATCAAAGGAGCATCGGGAGCTTCACCGATCTGCTTCAGAAAGTGCAGATCCGTTGTCTGCATCCCCATTGCCAGTTTCTGCAAGGTCCCCAAAGTCCCCCAAATCTTCAAAGTCCCCAAAGTCTCCAAAGTCTCCAAAGATTCAGGGGAAACATGGAAAAGGAAGTCCACTTAAGCATGATAGACATTCTCATTCTGCAGTTGATGGGCGTCCTAAAAAGGGTGGTTCTGGGGGTAAAGGCACCTGGGGAGGGTTACTTGATACGGATGACAATTACACTGCTGACCCGAATGACCCAAACTTCAATAGTAGTGAGGAATGTGAAAATTCCGATGCTAGAAAAGAGAGGGTTGATTTTGAGGAGTACAAAAAGAAAGCTACAATAATAGTGGAGGAATACTTTGCTACTGACGATATTACCTCGACTGCAAATGAACTTGGAGAGCTTGATAGGCCTACCTACAGCTACTATTTTGTAAAGAAGCTTGTCTCTAAGGCGATGGATAGGCATGACAAAGAAAAAGAAATGGCTGCTGTTCTTTTATCTGCACTATATGCTGACTACATTGACCCCCCGCAAGTTTACAAGGGATTCTGCAAATTGGTAGAATCTGCGGATGACTTCATTGTGGATATACCTGATACAGTTGATGTTCTTGCTCTGTTCATTGCCCGAGCTGTGGTTGATGACATACTTCCTCCTGCATTCTTGAAGAAACAAATGAACTACTTACCCAAAGATTCGAAAGGGATTGAAGTATTGAAAAGAGCTGAAAAGGGCTACTTAGCAGCCCCGCTCCATGCAGAAATCATTGAGCGGCGATGGGGAGGTAGCAAGAAAATGACTGTGGAGGATGTCAAAGCTAAGATTAATGATTTGTTGATAGAGTATGTAGTGAGTGGTGACAAGAAAGAGGCTTGCAGATGCATCAAGGATTTGAAAGTTCCATTTTTTCACCATGAAATAGTTAAACGAGCTCTTGTAATGGCAATGGAGAGGCGTCAAGCTGAAGGCCAACTACTAAATTTGCTGAAAGAAGCTGCTGAAGAAGGTTTAATAAACTCCAGTCAAGTATCAAAAGGCTTCGGTAGGATGATTGACTATGTTGATGACTTATCACTCGACATACCAAATGCACGGGGTATATTGCGGTCATTGATCTCCAAGGCAGCATCAGAGGGCTGGTTGTGTGCTTCATCTTTGAAGTCACTATCTCTGCAGCCAGAAAAGCGATCATTAGAAGATAGTGTTGCCAGAGTTTTCAAGACAAAGGCTCAATCTATTATTCAAGAGTACTTCTTATCTGGAGATATCTCAGAGGTAAACAGTTGTGTAGAGTCTGAGAATAGTACTTGTTCATCTGAGCTGAATGCTATCTTTGTTAAAAGATTGATAACTCTATCAATGGATCGGAAGAACAGAGAGAAGGAAATGGCATCCGTCTTACTGTCATCCCTGTGTTTTCCAGCTGATGATGTTGTAAATGGGTTTGTAATGTTGATAGAATCTGCAGATGACACAGCTCTGGATAATCCAGTAGTTGTCGAAGATCTTGCAATGTTTCTCGCTAGATCTGTGGTGGACGAAGTCCTAGCCCCACAGCACTTGGAAGAGATTGGAAGTCAGTGCTTGGCTGCAGAGTCGATTGGGAGCAAGGTTCTTAAAATGGCTAGGTCATTGTTAAAGGCTCGGCTTTCTGGGGAGCGGATATTAAGGTGTTGGGGTGGTGGTGGCAGAATCGGATGGGCAGTTGAGGATGTGAAGGACAAGATTGGGAAGTTGCTAGAAGAATTTGAGTCTGGAGGGGACGTTAGAGAAGCTTGCCGCTGCATGAAGGAGTTAGGCATGCCATTTTTCAACCACGAGGTTGTCAAAAAAGCTCTAGTGACGATTATGGAAAAGAAGAATGAGAGACTTTGGATTTTGCTGGAGGAATGTTTTGGCTCTGGACTCATTACAACGAACCAAATGGCAAAGGGGTTTGGGAGAGTTGTAGATTCTCTCGATGATTTGGCTTTGGATGTTCCTGATGCCCGGAAACAATTTACTCATTACGTTGAACGAGCAAAGAATGCAGGGTGGCTGGATTCCTCATTTTGCTTCAGCAAATCAGGACACAGTACAGAGAATGGCACTGGCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko05205 ko05206 map05205 map05206
Pfam Domains
Protein Families
MA3

Protein Analysis

722

Amino Acids

79.83

Weight (kDa)

5.79

Isoelectric Point (pI)

44.13

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MA3 PF02847 131 - 241 1.4e-19 MA3 domain
MA3 PF02847 295 - 404 1e-27 MA3 domain
MA3 PF02847 429 - 539 7.3e-17 MA3 domain
MA3 PF02847 595 - 704 9.2e-31 MA3 domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0011088)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G22730
fragaria_vesca FvH4_2g12790
malus_domestica MD05G1036500.v1.1 MD10G1038400.v1.1
prunus_persica Prupe.8G044800_v2.0.a1
pyrus_communis pycom05g02690 pycom10g02640 pycom10g02760
rosa_chinensis RchiOBHm_Chr6g0273671
rosa_laevigata RLG00000013603
rosa_multiflora Rmu_sc0002231.1_g000021
rosa_roxburghii Rroxscaffold_7G00195170
rosa_rugosa Rorug06G0076800 Rorug06G0076900 Rorug06G0077000
rosa_samantha Rh6AG191400 Rh6BG195400 Rh6CG194900 Rh6DG186800
rosa_wichuraiana Rw6G016750

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 263
AccBSI CCGCTC 3 cut(s) 820, 841, 1729
AciI CCGC 7 cut(s) 599, 638, 818, 841, 1174, 1729, 1849
AclWI GGATC 2 cut(s) 65, 1440
AcsI RAATTY 3 cut(s) 349, 1048, 1814
AcuI CTGAAG 4 cut(s) 42, 1053, 1089, 2110
AcyI GRCGYC 2 cut(s) 232, 1024
AfaI GTAC 4 cut(s) 389, 1319, 1375, 2146
AfiI CCNNNNNNNGG 3 cut(s) 242, 273, 703
AflII CTTAAG 1 cut(s) 194
AjnI CCWGG 1 cut(s) 266
Alw21I GWGCWC 1 cut(s) 1003
Alw26I GTCTC 4 cut(s) 150, 159, 517, 1930
AlwI GGATC 2 cut(s) 65, 1440
AlwNI CAGNNNCTG 1 cut(s) 101
Ama87I CYCGRG 1 cut(s) 696
AoxI GGCC 2 cut(s) 476, 1036
ApeKI GCWGC 7 cut(s) 554, 812, 1064, 1193, 1243, 1658, 1851
ApoI RAATTY 3 cut(s) 349, 1048, 1814
AseI ATTAAT 1 cut(s) 894
AspS9I GGNCC 1 cut(s) 108
AsuC2I CCSGG 1 cut(s) 2059
AsuHPI GGTGA 3 cut(s) 38, 938, 971
AsuII TTCGAA 1 cut(s) 767
AvaI CYCGRG 1 cut(s) 696
AvaII GGWCC 1 cut(s) 108
BanI GGYRCC 1 cut(s) 263
BanII GRGCYC 1 cut(s) 1003
BarI GAAGNNNNNNTAC 2 cut(s) 1026, 1058
BauI CACGAG 1 cut(s) 1886
Bbv12I GWGCWC 1 cut(s) 1003
BbvI GCAGC 7 cut(s) 541, 824, 1051, 1205, 1255, 1645, 1838
BccI CCATC 5 cut(s) 8, 221, 517, 840, 1761
BcgI CGANNNNNNTGC 2 cut(s) 1559, 1593
BciT130I CCWGG 1 cut(s) 268
BcnI CCSGG 1 cut(s) 2059
BcoDI GTCTC 4 cut(s) 150, 159, 517, 1930
BfaI CTAG 6 cut(s) 360, 1593, 1616, 1695, 1808, 1907
BfmI CTRYAG 5 cut(s) 219, 484, 1241, 1533, 1659
BfrI CTTAAG 1 cut(s) 194
BglII AGATCT 2 cut(s) 1573, 1595
BisI GCNGC 9 cut(s) 555, 813, 842, 1065, 1194, 1244, 1659, 1849, 1852
BlsI GCNGC 9 cut(s) 556, 814, 843, 1066, 1195, 1245, 1660, 1850, 1853
BmcAI AGTACT 2 cut(s) 1319, 1375
Bme1390I CCNGG 2 cut(s) 268, 2059
Bme18I GGWCC 1 cut(s) 108
BmeT110I CYCGRG 1 cut(s) 696
BmgT120I GGNCC 1 cut(s) 108
BmiI GGNNCC 2 cut(s) 110, 265
BmrFI CCNGG 2 cut(s) 268, 2059
BmsI GCATC 8 cut(s) 43, 92, 346, 938, 960, 1205, 1469, 2044
BpmI CTGGAG 4 cut(s) 1072, 1350, 1845, 1973
Bpu14I TTCGAA 1 cut(s) 767
BpuMI CCSGG 1 cut(s) 2059
BsaHI GRCGYC 2 cut(s) 232, 1024
BsaJI CCNNGG 2 cut(s) 267, 1188
BsaXI ACNNNNNCTCC 2 cut(s) 1818, 1848
Bsc4I CCNNNNNNNGG 3 cut(s) 242, 273, 703
Bse1I ACTGG 4 cut(s) 95, 1089, 1559, 2164
Bse3DI GCAATG 4 cut(s) 89, 690, 1020, 1587
BseBI CCWGG 1 cut(s) 268
BseDI CCNNGG 2 cut(s) 267, 1188
BseLI CCNNNNNNNGG 3 cut(s) 242, 273, 703
BseMI GCAATG 4 cut(s) 89, 690, 1020, 1587
BseMII CTCAG 3 cut(s) 1353, 1356, 1377
BseNI ACTGG 4 cut(s) 95, 1089, 1559, 2164
BseRI GAGGAG 1 cut(s) 398
BseXI GCAGC 7 cut(s) 541, 824, 1051, 1205, 1255, 1645, 1838
BsgI GTGCAG 2 cut(s) 87, 555
BshFI GGCC 2 cut(s) 478, 1038
BshNI GGYRCC 1 cut(s) 263
BsiHKAI GWGCWC 1 cut(s) 1003
BsiHKCI CYCGRG 1 cut(s) 696
BsiSI CCGG 1 cut(s) 2059
BslFI GGGAC 4 cut(s) 94, 103, 121, 1844
BslI CCNNNNNNNGG 3 cut(s) 242, 273, 703
BsmAI GTCTC 4 cut(s) 150, 159, 517, 1930
BsmFI GGGAC 4 cut(s) 94, 103, 121, 1844
BsmI GAATGC 3 cut(s) 728, 1399, 2101
BsnI GGCC 2 cut(s) 478, 1038
BsoBI CYCGRG 1 cut(s) 696
Bsp119I TTCGAA 1 cut(s) 767
Bsp1286I GDGCHC 1 cut(s) 1003
Bsp143I GATC 7 cut(s) 50, 70, 1182, 1256, 1432, 1573, 1595
BspACI CCGC 7 cut(s) 599, 638, 818, 841, 1174, 1729, 1849
BspANI GGCC 2 cut(s) 478, 1038
BspCNI CTCAG 3 cut(s) 1352, 1357, 1378
BspLI GGNNCC 2 cut(s) 110, 265
BspMAI CTGCAG 4 cut(s) 223, 1245, 1537, 1663
BspPI GGATC 2 cut(s) 65, 1440
BspT104I TTCGAA 1 cut(s) 767
BspT107I GGYRCC 1 cut(s) 263
BspTI CTTAAG 1 cut(s) 194
BsrBI CCGCTC 3 cut(s) 820, 841, 1729
BsrDI GCAATG 4 cut(s) 89, 690, 1020, 1587
BsrI ACTGG 4 cut(s) 95, 1089, 1559, 2164
BssECI CCNNGG 2 cut(s) 267, 1188
BssMI GATC 7 cut(s) 50, 70, 1182, 1256, 1432, 1573, 1595
BssNI GRCGYC 2 cut(s) 232, 1024
BssSI CACGAG 1 cut(s) 1886
BssT1I CCWWGG 1 cut(s) 1188
Bst2BI CACGAG 1 cut(s) 1886
Bst2UI CCWGG 1 cut(s) 268
Bst4CI ACNGT 5 cut(s) 670, 871, 1352, 1473, 2144
Bst6I CTCTTC 1 cut(s) 1629
BstACI GRCGYC 2 cut(s) 232, 1024
BstAFI CTTAAG 1 cut(s) 194
BstAPI GCANNNNNTGC 2 cut(s) 578, 2096
BstBI TTCGAA 1 cut(s) 767
BstC8I GCNNGC 3 cut(s) 943, 1846, 1871
BstDEI CTNAG 6 cut(s) 516, 808, 888, 1339, 1365, 1386
BstKTI GATC 7 cut(s) 53, 73, 1185, 1259, 1435, 1576, 1598
BstMAI GTCTC 4 cut(s) 150, 159, 517, 1930
BstMBI GATC 7 cut(s) 50, 70, 1182, 1256, 1432, 1573, 1595
BstMWI GCNNNNNNNGC 5 cut(s) 40, 475, 578, 1252, 2096
BstNI CCWGG 1 cut(s) 268
BstNSI RCATGY 1 cut(s) 1873
BstSCI CCNGG 2 cut(s) 266, 2057
BstSFI CTRYAG 5 cut(s) 219, 484, 1241, 1533, 1659
BstV1I GCAGC 7 cut(s) 541, 824, 1051, 1205, 1255, 1645, 1838
BstX2I RGATCY 3 cut(s) 70, 1573, 1595
BstYI RGATCY 3 cut(s) 70, 1573, 1595
BsuRI GGCC 2 cut(s) 478, 1038
BtgZI GCGATG 2 cut(s) 536, 859
BtsI GCAGTG 1 cut(s) 300
BtsIMutI CAGTG 4 cut(s) 16, 300, 1655, 2157
Cac8I GCNNGC 3 cut(s) 943, 1846, 1871
CaiI CAGNNNCTG 1 cut(s) 101
Cfr13I GGNCC 1 cut(s) 108
CseI GACGC 2 cut(s) 221, 1013
Csp6I GTAC 4 cut(s) 388, 1318, 1374, 2145
CspCI CAANNNNNGTGG 4 cut(s) 393, 428, 1611, 1646
CviAII CATG 7 cut(s) 176, 200, 533, 824, 983, 1855, 1870
CviQI GTAC 4 cut(s) 388, 1318, 1374, 2145
DdeI CTNAG 6 cut(s) 516, 808, 888, 1339, 1365, 1386
DpnI GATC 7 cut(s) 52, 72, 1184, 1258, 1434, 1575, 1597
DpnII GATC 7 cut(s) 50, 70, 1182, 1256, 1432, 1573, 1595
Eam1104I CTCTTC 1 cut(s) 1629
EarI CTCTTC 1 cut(s) 1629
Ecl136II GAGCTC 1 cut(s) 1001
Eco130I CCWWGG 1 cut(s) 1188
Eco147I AGGCCT 1 cut(s) 478
Eco24I GRGCYC 1 cut(s) 1003
Eco32I GATATC 1 cut(s) 1336
Eco47I GGWCC 1 cut(s) 108
Eco53kI GAGCTC 1 cut(s) 1001
Eco57I CTGAAG 4 cut(s) 42, 1053, 1089, 2110
Eco88I CYCGRG 1 cut(s) 696
EcoICRI GAGCTC 1 cut(s) 1001
EcoO109I RGGNCCY 1 cut(s) 108
EcoRII CCWGG 1 cut(s) 266
EcoRV GATATC 1 cut(s) 1336
EcoT14I CCWWGG 1 cut(s) 1188
EcoT22I ATGCAT 1 cut(s) 953
EcoT38I GRGCYC 1 cut(s) 1003
ErhI CCWWGG 1 cut(s) 1188
FaeI CATG 7 cut(s) 179, 203, 536, 827, 986, 1858, 1873
FalI AAGNNNNNCTT 2 cut(s) 791, 823
FaqI GGGAC 4 cut(s) 94, 103, 121, 1844
FatI CATG 7 cut(s) 175, 199, 532, 823, 982, 1854, 1869
FauI CCCGC 2 cut(s) 606, 825
Fnu4HI GCNGC 9 cut(s) 555, 813, 842, 1065, 1194, 1244, 1659, 1849, 1852
FriOI GRGCYC 1 cut(s) 1003
Fsp4HI GCNGC 9 cut(s) 555, 813, 842, 1065, 1194, 1244, 1659, 1849, 1852
FspBI CTAG 6 cut(s) 360, 1593, 1616, 1695, 1808, 1907
GluI GCNGC 9 cut(s) 555, 813, 842, 1065, 1194, 1244, 1659, 1849, 1852
GsuI CTGGAG 4 cut(s) 1072, 1350, 1845, 1973
HaeIII GGCC 2 cut(s) 478, 1038
HapII CCGG 1 cut(s) 2059
HgaI GACGC 2 cut(s) 221, 1013
Hin1I GRCGYC 2 cut(s) 232, 1024
Hin1II CATG 7 cut(s) 179, 203, 536, 827, 986, 1858, 1873
HindIII AAGCTT 2 cut(s) 506, 1842
HpaII CCGG 1 cut(s) 2059
HphI GGTGA 3 cut(s) 38, 938, 971
Hpy166II GTNNAC 4 cut(s) 191, 607, 1348, 1606
Hpy188I TCNGA 8 cut(s) 61, 355, 1201, 1342, 1366, 1387, 1437, 1766
Hpy8I GTNNAC 4 cut(s) 191, 607, 1348, 1606
HpyAV CCTTC 5 cut(s) 1028, 1067, 1444, 1780, 1852
HpyCH4III ACNGT 5 cut(s) 670, 871, 1352, 1473, 2144
HpyCH4IV ACGT 2 cut(s) 1833, 2079
HpyF10VI GCNNNNNNNGC 5 cut(s) 40, 475, 578, 1252, 2096
HpyF3I CTNAG 6 cut(s) 516, 808, 888, 1339, 1365, 1386
HpySE526I ACGT 2 cut(s) 1833, 2079
Hsp92I GRCGYC 2 cut(s) 232, 1024
Hsp92II CATG 7 cut(s) 179, 203, 536, 827, 986, 1858, 1873
Kzo9I GATC 7 cut(s) 50, 70, 1182, 1256, 1432, 1573, 1595
LmnI GCTCC 5 cut(s) 31, 40, 825, 1674, 1726
Lsp1109I GCAGC 7 cut(s) 541, 824, 1051, 1205, 1255, 1645, 1838
LweI GCATC 8 cut(s) 43, 92, 346, 938, 960, 1205, 1469, 2044
MaeI CTAG 6 cut(s) 360, 1593, 1616, 1695, 1808, 1907
MaeII ACGT 2 cut(s) 1833, 2079
MaeIII GTNAC 4 cut(s) 276, 926, 1230, 1909
MalI GATC 7 cut(s) 52, 72, 1184, 1258, 1434, 1575, 1597
MbiI CCGCTC 3 cut(s) 820, 841, 1729
MboI GATC 7 cut(s) 50, 70, 1182, 1256, 1432, 1573, 1595
MboII GAAGA 9 cut(s) 120, 748, 1082, 1277, 1450, 1583, 1646, 1823, 1939
MflI RGATCY 3 cut(s) 70, 1573, 1595
MhlI GDGCHC 1 cut(s) 1003
MluCI AATT 6 cut(s) 295, 349, 623, 1048, 1814, 2066
MlyI GAGTC 4 cut(s) 1370, 1673, 1829, 1968
Mph1103I ATGCAT 1 cut(s) 953
MseI TTAA 8 cut(s) 195, 894, 993, 1079, 1407, 1686, 1706, 1736
MslI CAYNNNNRTG 1 cut(s) 1480
MspA1I CMGCKG 2 cut(s) 1493, 1851
MspCI CTTAAG 1 cut(s) 194
MspI CCGG 1 cut(s) 2059
MspR9I CCNGG 2 cut(s) 268, 2059
Mva1269I GAATGC 3 cut(s) 728, 1399, 2101
MvaI CCWGG 1 cut(s) 268
MwoI GCNNNNNNNGC 5 cut(s) 40, 475, 578, 1252, 2096
NciI CCSGG 1 cut(s) 2059
NdeII GATC 7 cut(s) 50, 70, 1182, 1256, 1432, 1573, 1595
NlaIII CATG 7 cut(s) 179, 203, 536, 827, 986, 1858, 1873
NlaIV GGNNCC 2 cut(s) 110, 265
NmeAIII GCCGAG 1 cut(s) 1693
NmuCI GTSAC 3 cut(s) 926, 1230, 1909
NsiI ATGCAT 1 cut(s) 953
NspI RCATGY 1 cut(s) 1873
NspV TTCGAA 1 cut(s) 767
PaeI GCATGC 1 cut(s) 1873
PceI AGGCCT 1 cut(s) 478
PctI GAATGC 3 cut(s) 728, 1399, 2101
PfeI GAWTC 8 cut(s) 163, 615, 632, 764, 1529, 1761, 2021, 2111
PflFI GACNNNGTC 1 cut(s) 1610
PkrI GCNGC 9 cut(s) 556, 814, 843, 1066, 1195, 1245, 1660, 1850, 1853
PleI GAGTC 4 cut(s) 1369, 1672, 1828, 1968
PpsI GAGTC 4 cut(s) 1369, 1672, 1828, 1968
PpuMI RGGWCCY 1 cut(s) 108
PshBI ATTAAT 1 cut(s) 894
Psp124BI GAGCTC 1 cut(s) 1003
Psp5II RGGWCCY 1 cut(s) 108
Psp6I CCWGG 1 cut(s) 266
PspGI CCWGG 1 cut(s) 266
PspN4I GGNNCC 2 cut(s) 110, 265
PspPI GGNCC 1 cut(s) 108
PspPPI RGGWCCY 1 cut(s) 108
PstI CTGCAG 4 cut(s) 223, 1245, 1537, 1663
PstNI CAGNNNCTG 1 cut(s) 101
PsuI RGATCY 3 cut(s) 70, 1573, 1595
PsyI GACNNNGTC 1 cut(s) 1610
PvuII CAGCTG 1 cut(s) 1493
RsaI GTAC 4 cut(s) 389, 1319, 1375, 2146
RsaNI GTAC 4 cut(s) 388, 1318, 1374, 2145
RseI CAYNNNNRTG 1 cut(s) 1480
SacI GAGCTC 1 cut(s) 1003
SaqAI TTAA 8 cut(s) 195, 894, 993, 1079, 1407, 1686, 1706, 1736
SatI GCNGC 9 cut(s) 555, 813, 842, 1065, 1194, 1244, 1659, 1849, 1852
Sau3AI GATC 7 cut(s) 50, 70, 1182, 1256, 1432, 1573, 1595
Sau96I GGNCC 1 cut(s) 108
ScaI AGTACT 2 cut(s) 1319, 1375
SchI GAGTC 4 cut(s) 1370, 1673, 1829, 1968
ScrFI CCNGG 2 cut(s) 268, 2059
SduI GDGCHC 1 cut(s) 1003
SfaNI GCATC 8 cut(s) 43, 92, 346, 938, 960, 1205, 1469, 2044
SfcI CTRYAG 5 cut(s) 219, 484, 1241, 1533, 1659
SfuI TTCGAA 1 cut(s) 767
SinI GGWCC 1 cut(s) 108
SmiMI CAYNNNNRTG 1 cut(s) 1480
SmlI CTYRAG 1 cut(s) 194
SmoI CTYRAG 1 cut(s) 194
SphI GCATGC 1 cut(s) 1873
Sse9I AATT 6 cut(s) 295, 349, 623, 1048, 1814, 2066
SseBI AGGCCT 1 cut(s) 478
SsiI CCGC 7 cut(s) 599, 638, 818, 841, 1174, 1729, 1849
SspMI CTAG 6 cut(s) 360, 1593, 1616, 1695, 1808, 1907
SstI GAGCTC 1 cut(s) 1003
StuI AGGCCT 1 cut(s) 478
StyD4I CCNGG 2 cut(s) 266, 2057
StyI CCWWGG 1 cut(s) 1188
TaaI ACNGT 5 cut(s) 670, 871, 1352, 1473, 2144
TaiI ACGT 2 cut(s) 1836, 2082
TaqI TCGA 6 cut(s) 446, 767, 1146, 1569, 1667, 2028
TasI AATT 6 cut(s) 295, 349, 623, 1048, 1814, 2066
TatI WGTACW 4 cut(s) 387, 1317, 1373, 2144
TauI GCSGC 2 cut(s) 844, 1851
TfiI GAWTC 8 cut(s) 163, 615, 632, 764, 1529, 1761, 2021, 2111
Tru1I TTAA 8 cut(s) 195, 894, 993, 1079, 1407, 1686, 1706, 1736
Tru9I TTAA 8 cut(s) 195, 894, 993, 1079, 1407, 1686, 1706, 1736
TscAI CASTG 4 cut(s) 16, 307, 1655, 2164
TseFI GTSAC 3 cut(s) 926, 1230, 1909
TseI GCWGC 7 cut(s) 554, 812, 1064, 1193, 1243, 1658, 1851
Tsp45I GTSAC 3 cut(s) 926, 1230, 1909
TspDTI ATGAA 8 cut(s) 471, 637, 679, 761, 999, 1209, 1371, 1871
TspGWI ACGGA 3 cut(s) 63, 302, 1453
TspRI CASTG 4 cut(s) 16, 307, 1655, 2164
Tth111I GACNNNGTC 1 cut(s) 1610
Vha464I CTTAAG 1 cut(s) 194
VpaK11BI GGWCC 1 cut(s) 108
VspI ATTAAT 1 cut(s) 894
XapI RAATTY 3 cut(s) 349, 1048, 1814
XceI RCATGY 1 cut(s) 1873
XspI CTAG 6 cut(s) 360, 1593, 1616, 1695, 1808, 1907
ZrmI AGTACT 2 cut(s) 1319, 1375
Zsp2I ATGCAT 1 cut(s) 953
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.