Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0008191

Physical Location & Seq

Genomic Coordinates Reverse (-)

8346827 .. 8350068

Gene Structure 3242 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G23540.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2163 bp

ATGTCAGACTTAGGCGAGTCGCCGAGTTCTTCACCACCAGCACCACCAGCTGATACCGCTCCTCCACCAGAGACTCCATCAGAAAACTCAGCTCTTCCACCTGTTGATTCCTCTCCTCCTAGTCCACCAGCTGATTCATCATCAACACCGCCGCTGTCAGAACCATCCACTCCTCCTCCAGATTCACAGCTTCCTCCTTTACCTTCGATTCTTCCTCCGCTAACAGATTCTCCACCTCCACCTTCCGATTCTTCTCCACCCGTTGATTCAACCCCTTCTCCGCCGCCACCGACGTCAAACGAATCTCCTTCTCCTCCAGAAGATTCCGAAACACCACCTGCTCCACCAAATGAATCCAATGACAACAACCCTCCTCCGTCTCAAGATCTTCAATCGCCTCCTCCATCGTCGCCGTCGCCGAATGTAGGACCCACAAACCCGGAATCACCACCGTTACAATCTCCTCCAGCTCCACCAGCATCAGATCCTACAAATTCACCGCCAGCTTCACCATTAGACCCTACCAATCCTCCCCCAATACAACCATCAGGACCAGCCACTTCTCCTCCGGCTAATCCCAACGCTCCGCCGAGCCCATTCCCCACAGTACCACCCAAAACTCCTTCTAGTGGACCTGTGGTGTCTCCATCTCTCACATCCCCTAGTAAAGGAACTCCTACTCCAAACCAAGGCAATGGAGATGGCGGTGGCGGTGGTGGCGGCTATCAAGGGAAGACTATGGTTGGTATGGCTGTAGCCGGTTTCGCAATCATGGCGCTTATAGGCGTTGTGTTCTTAGTGAGAAGAAAGAAAAAGAGAAACATTGATAGCTATAATCACTCACAGTACTTGCCACATCCCAATTTCTCTGTTAAATCAGATGGATTCTTATACGGTCAAGATCCAGGTAAAGGATACTCCTCTGGTCCTAATGGTTCAATGTATAACAATTCACAGCAACAACAATCCTCTATGGGAAACAGTTATGGTACAGCTGGTGGTGGTTATCCTCATCATCAAATGCAATCAAGTGGCACACCTGACTCTGCTATACTCGGAAGTGGCCAGACTCATTTCAGTTACGAAGAGCTTGCTGAGATAACACAAGGCTTTGCTCGCAAAAACATTCTTGGAGAAGGCGGATTTGGATGTGTCTATAAAGGTACATTGCAGGATGGTAAAGTTGTTGCGGTTAAGCAGCTTAAAGCTGGAAGTGGACAAGGTGACCGTGAATTCAAAGCAGAGGTTGAGATCATCAGCCGCGTTCATCATCGCCATTTGGTCTCTCTGGTTGGTTACTGCATTTCAGACCAGCATAGATTGCTTATCTATGAGTATGTTTCTAATCAAACCTTGGAGCATCATTTGCATGGAAAGGGTTTGCCAGTTTTAGAGTGGTCTAAGAGAGTCCGGATCGCTATAGGATCAGCCAAAGGGTTGGCATATCTTCACGAAGACTGTCATCCGAAAATCATTCACAGAGATATAAAGTCAGCAAATATTCTTCTAGATGATGAATATGAAGCTCAGGTTGCTGATTTTGGACTTGCTAGACTCAATGATACAACACAAACTCATGTTTCAACTCGGGTTATGGGAACCTTCGGGTACCTAGCGCCGGAATATGCATCAAGTGGAAAATTGACTGATAGATCCGATGTATTCTCATTCGGGGTTGTTCTCTTAGAGCTTGTAACTGGACGGAAACCAGTTGACCAGACTCAGCCTCTAGGAGAAGAGAGTTTGGTTGAATGGGCGCGCCCGCTGCTTCTCAAAGCCATTGAGACCGGAGATTTAAGCGAACTGATTGATACACGGCTTGAAAAGCGTTATGTGGAGCATGAAGTCTTCAGAATGATCGAGACAGCCGCTGCATGTGTTAGACATTCTGGTCCAAAACGCCCACGCATGGTTCAGGTTGTGAGAGCATTGGACTGCGACGGAGACTCGGGAGATATTAGCAACGGAATCAAAATTGGGCAAAGCACAACTTATGACTCAGGGCAATACAATGAAGACATTATGAAATTCAGGAAAATGGCGTTTGGTGGTGATAACAGCGTAGAGTCAGGATTGTACAGTGGAAACTACTCTGCCAAAAGCTCTTCAGATTTCTCAGGGAATGAATCTGAGACTCGGCCTTTCAACAACCGACGGTTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005488 GO:0005515 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0019899 GO:0019900 GO:0019901 GO:0023052 GO:0032502 GO:0036211 GO:0038023 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060089 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase Pkinase_Tyr

Protein Analysis

720

Amino Acids

76.3

Weight (kDa)

5.28

Isoelectric Point (pI)

68.73

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	372 - 532	3.1e-31	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	374 - 525	8.4e-32	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008191)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G10620 AT1G23540 AT1G23540 AT1G70450 AT1G70460
fragaria_vesca	FvH4_4g34330
malus_domestica	MD13G1092900.v1.1 MD16G1093800.v1.1
prunus_persica	Prupe.1G252700_v2.0.a1 Prupe.1G252700_v2.0.a1 Prupe.1G252700_v2.0.a1
pyrus_communis	pycom13g08090
rosa_chinensis	RchiOBHm_Chr4g0443751
rosa_laevigata	RLG00000005893
rosa_multiflora	Rmu_co8490185.1_g000001 Rmu_sc0001426.1_g000001
rosa_roxburghii	Rroxscaffold_5G00384320
rosa_rugosa	Rorug04G0347100
rosa_samantha	Rh4AG407200 Rh4BG418100 Rh4CG432300 Rh4DG413400
rosa_wichuraiana	Rw4G034970

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	346
AasI	GACNNNNNNGTC	1 cut(s)	1890
AatII	GACGTC	1 cut(s)	296
Acc36I	ACCTGC	1 cut(s)	346
Acc65I	GGTACC	1 cut(s)	1608
AccB1I	GGYRCC	1 cut(s)	1608
AccBSI	CCGCTC	1 cut(s)	59
AccII	CGCG	2 cut(s)	1263, 1759
AccIII	TCCGGA	1 cut(s)	1410
AclWI	GGATC	5 cut(s)	479, 896, 1421, 1432, 1647
AcoI	YGGCCR	1 cut(s)	1063
AcsI	RAATTY	3 cut(s)	493, 1232, 2027
AcuI	CTGAAG	2 cut(s)	1834, 2091
AcyI	GRCGYC	1 cut(s)	293
AfaI	GTAC	6 cut(s)	609, 848, 991, 1165, 1610, 2078
AfiI	CCNNNNNNNGG	7 cut(s)	425, 629, 668, 689, 911, 1618, 1909
AgsI	TTSAA	8 cut(s)	270, 392, 939, 1237, 1584, 1751, 1823, 2146
AjnI	CCWGG	1 cut(s)	904
AjuI	GAANNNNNNNTTGG	2 cut(s)	1128, 1160
AloI	GAACNNNNNNTCC	2 cut(s)	664, 696
Alw26I	GTCTC	8 cut(s)	65, 384, 648, 1288, 1778, 1856, 1938, 2126
AlwI	GGATC	5 cut(s)	479, 896, 1421, 1432, 1647
AlwNI	CAGNNNCTG	1 cut(s)	1871
Ama87I	CYCGRG	2 cut(s)	1587, 1948
Aor13HI	TCCGGA	1 cut(s)	1410
AoxI	GGCC	2 cut(s)	1063, 2138
ApeKI	GCWGC	3 cut(s)	1198, 1765, 1871
ApoI	RAATTY	3 cut(s)	493, 1232, 2027
AscI	GGCGCGCC	1 cut(s)	1757
Asp718I	GGTACC	1 cut(s)	1608
AspLEI	GCGC	4 cut(s)	778, 1618, 1759, 1761
AspS9I	GGNCC	5 cut(s)	428, 551, 632, 926, 1892
AsuC2I	CCSGG	1 cut(s)	440
AsuHPI	GGTGA	6 cut(s)	24, 438, 489, 501, 1235, 2063
AvaI	CYCGRG	2 cut(s)	1587, 1948
AvaII	GGWCC	5 cut(s)	428, 551, 632, 926, 1892
BalI	TGGCCA	1 cut(s)	1065
BanI	GGYRCC	1 cut(s)	1608
BanII	GRGCYC	1 cut(s)	596
BbsI	GAAGAC	4 cut(s)	740, 1461, 1840, 2022
BbvI	GCAGC	3 cut(s)	1210, 1752, 1858
BccI	CCATC	8 cut(s)	85, 172, 412, 553, 655, 695, 875, 1169
BceAI	ACGGC	2 cut(s)	397, 1832
BcgI	CGANNNNNNTGC	2 cut(s)	1073, 1107
BciT130I	CCWGG	1 cut(s)	906
BciVI	GTATCC	1 cut(s)	908
BcnI	CCSGG	1 cut(s)	440
BcoDI	GTCTC	8 cut(s)	65, 384, 648, 1288, 1778, 1856, 1938, 2126
BfaI	CTAG	7 cut(s)	120, 627, 663, 1508, 1551, 1613, 1730
BfmI	CTRYAG	2 cut(s)	753, 1419
BfoI	RGCGCY	2 cut(s)	779, 1619
BfuAI	ACCTGC	1 cut(s)	346
BfuI	GTATCC	1 cut(s)	908
BglII	AGATCT	1 cut(s)	385
BisI	GCNGC	8 cut(s)	152, 284, 721, 1199, 1261, 1766, 1869, 1872
BlsI	GCNGC	8 cut(s)	153, 285, 722, 1200, 1262, 1767, 1870, 1873
BmcAI	AGTACT	1 cut(s)	848
Bme1390I	CCNGG	2 cut(s)	440, 906
Bme18I	GGWCC	5 cut(s)	428, 551, 632, 926, 1892
BmeT110I	CYCGRG	2 cut(s)	1587, 1948
BmgT120I	GGNCC	5 cut(s)	428, 551, 632, 926, 1892
BmiI	GGNNCC	3 cut(s)	430, 1600, 1610
BmrFI	CCNGG	2 cut(s)	440, 906
BmsI	GCATC	3 cut(s)	488, 1369, 1637
BpiI	GAAGAC	4 cut(s)	740, 1461, 1840, 2022
BpmI	CTGGAG	3 cut(s)	162, 300, 450
Bpu10I	CCTNAGC	1 cut(s)	1527
BpuEI	CTTGAG	1 cut(s)	366
BpuMI	CCSGG	1 cut(s)	440
BsaHI	GRCGYC	1 cut(s)	293
BsaI	GGTCTC	2 cut(s)	1288, 1778
BsaJI	CCNNGG	2 cut(s)	688, 1353
BsaWI	WCCGGW	2 cut(s)	1410, 1787
Bsc4I	CCNNNNNNNGG	7 cut(s)	425, 629, 668, 689, 911, 1618, 1909
Bse118I	RCCGGY	1 cut(s)	758
Bse1I	ACTGG	3 cut(s)	1385, 1702, 1709
Bse3DI	GCAATG	2 cut(s)	700, 1166
BseAI	TCCGGA	1 cut(s)	1410
BseBI	CCWGG	1 cut(s)	906
BseDI	CCNNGG	2 cut(s)	688, 1353
BseGI	GGATG	6 cut(s)	164, 656, 856, 1154, 1180, 1462
BseLI	CCNNNNNNNGG	7 cut(s)	425, 629, 668, 689, 911, 1618, 1909
BseMI	GCAATG	2 cut(s)	700, 1166
BseMII	CTCAG	7 cut(s)	102, 1086, 1541, 1736, 2013, 2121, 2130
BseNI	ACTGG	3 cut(s)	1385, 1702, 1709
BsePI	GCGCGC	1 cut(s)	1757
BseXI	GCAGC	3 cut(s)	1210, 1752, 1858
Bsh1236I	CGCG	2 cut(s)	1263, 1759
BshFI	GGCC	2 cut(s)	1065, 2140
BshNI	GGYRCC	1 cut(s)	1608
BsiHKCI	CYCGRG	2 cut(s)	1587, 1948
BsiSI	CCGG	6 cut(s)	440, 569, 759, 1411, 1619, 1788
BslI	CCNNNNNNNGG	7 cut(s)	425, 629, 668, 689, 911, 1618, 1909
BsmAI	GTCTC	8 cut(s)	65, 384, 648, 1288, 1778, 1856, 1938, 2126
BsmBI	CGTCTC	1 cut(s)	384
BsnI	GGCC	2 cut(s)	1065, 2140
Bso31I	GGTCTC	2 cut(s)	1288, 1778
BsoBI	CYCGRG	2 cut(s)	1587, 1948
Bsp1286I	GDGCHC	1 cut(s)	596
Bsp13I	TCCGGA	1 cut(s)	1410
Bsp1407I	TGTACA	1 cut(s)	2076
Bsp143I	GATC	8 cut(s)	385, 484, 901, 1251, 1413, 1424, 1652, 1857
BspANI	GGCC	2 cut(s)	1065, 2140
BspCNI	CTCAG	7 cut(s)	101, 1087, 1540, 1735, 2012, 2122, 2129
BspEI	TCCGGA	1 cut(s)	1410
BspFNI	CGCG	2 cut(s)	1263, 1759
BspLI	GGNNCC	3 cut(s)	430, 1600, 1610
BspMI	ACCTGC	1 cut(s)	346
BspPI	GGATC	5 cut(s)	479, 896, 1421, 1432, 1647
BspQI	GCTCTTC	3 cut(s)	99, 1080, 2110
BspT107I	GGYRCC	1 cut(s)	1608
BspTNI	GGTCTC	2 cut(s)	1288, 1778
BsrBI	CCGCTC	1 cut(s)	59
BsrDI	GCAATG	2 cut(s)	700, 1166
BsrFI	RCCGGY	1 cut(s)	758
BsrGI	TGTACA	1 cut(s)	2076
BsrI	ACTGG	3 cut(s)	1385, 1702, 1709
BssAI	RCCGGY	1 cut(s)	758
BssECI	CCNNGG	2 cut(s)	688, 1353
BssHII	GCGCGC	1 cut(s)	1757
BssMI	GATC	8 cut(s)	385, 484, 901, 1251, 1413, 1424, 1652, 1857
BssNI	GRCGYC	1 cut(s)	293
BssT1I	CCWWGG	2 cut(s)	688, 1353
Bst2UI	CCWGG	1 cut(s)	906
Bst4CI	ACNGT	9 cut(s)	453, 607, 846, 896, 983, 1229, 1460, 2081, 2157
Bst6I	CTCTTC	4 cut(s)	99, 1080, 1731, 2110
BstACI	GRCGYC	1 cut(s)	293
BstAPI	GCANNNNNTGC	2 cut(s)	1321, 1366
BstAUI	TGTACA	1 cut(s)	2076
BstC8I	GCNNGC	5 cut(s)	504, 1092, 1117, 1759, 1763
BstEII	GGTNACC	1 cut(s)	1223
BstENI	CCTNNNNNAGG	1 cut(s)	666
BstF5I	GGATG	6 cut(s)	164, 656, 856, 1154, 1180, 1462
BstFNI	CGCG	2 cut(s)	1263, 1759
BstH2I	RGCGCY	2 cut(s)	779, 1619
BstHHI	GCGC	4 cut(s)	778, 1618, 1759, 1761
BstKTI	GATC	8 cut(s)	388, 487, 904, 1254, 1416, 1427, 1655, 1860
BstMAI	GTCTC	8 cut(s)	65, 384, 648, 1288, 1778, 1856, 1938, 2126
BstMBI	GATC	8 cut(s)	385, 484, 901, 1251, 1413, 1424, 1652, 1857
BstNI	CCWGG	1 cut(s)	906
BstNSI	RCATGY	1 cut(s)	1878
BstPI	GGTNACC	1 cut(s)	1223
BstSCI	CCNGG	2 cut(s)	438, 904
BstSFI	CTRYAG	2 cut(s)	753, 1419
BstUI	CGCG	2 cut(s)	1263, 1759
BstV1I	GCAGC	3 cut(s)	1210, 1752, 1858
BstV2I	GAAGAC	4 cut(s)	740, 1461, 1840, 2022
BstX2I	RGATCY	4 cut(s)	385, 484, 901, 1652
BstXI	CCANNNNNNTGG	2 cut(s)	695, 1438
BstYI	RGATCY	4 cut(s)	385, 484, 901, 1652
BsuI	GTATCC	1 cut(s)	908
BsuRI	GGCC	2 cut(s)	1065, 2140
BtgZI	GCGATG	1 cut(s)	1256
BtsCI	GGATG	6 cut(s)	164, 656, 856, 1154, 1180, 1462
BtsIMutI	CAGTG	1 cut(s)	2086
BveI	ACCTGC	1 cut(s)	346
Cac8I	GCNNGC	5 cut(s)	504, 1092, 1117, 1759, 1763
CaiI	CAGNNNCTG	1 cut(s)	1871
CfoI	GCGC	4 cut(s)	778, 1618, 1759, 1761
Cfr10I	RCCGGY	1 cut(s)	758
Cfr13I	GGNCC	5 cut(s)	428, 551, 632, 926, 1892
Csp6I	GTAC	6 cut(s)	608, 847, 990, 1164, 1609, 2077
CviAII	CATG	6 cut(s)	772, 1370, 1577, 1841, 1875, 1909
CviQI	GTAC	6 cut(s)	608, 847, 990, 1164, 1609, 2077
DpnI	GATC	8 cut(s)	387, 486, 903, 1253, 1415, 1426, 1654, 1859
DpnII	GATC	8 cut(s)	385, 484, 901, 1251, 1413, 1424, 1652, 1857
DrdI	GACNNNNNNGTC	1 cut(s)	1890
DseDI	GACNNNNNNGTC	1 cut(s)	1890
EaeI	YGGCCR	1 cut(s)	1063
Eam1104I	CTCTTC	4 cut(s)	99, 1080, 1731, 2110
EarI	CTCTTC	4 cut(s)	99, 1080, 1731, 2110
EciI	GGCGGA	3 cut(s)	270, 576, 1155
Eco130I	CCWWGG	2 cut(s)	688, 1353
Eco24I	GRGCYC	1 cut(s)	596
Eco31I	GGTCTC	2 cut(s)	1288, 1778
Eco47I	GGWCC	5 cut(s)	428, 551, 632, 926, 1892
Eco57I	CTGAAG	2 cut(s)	1834, 2091
Eco88I	CYCGRG	2 cut(s)	1587, 1948
Eco91I	GGTNACC	1 cut(s)	1223
EcoNI	CCTNNNNNAGG	1 cut(s)	666
EcoO109I	RGGNCCY	1 cut(s)	428
EcoO65I	GGTNACC	1 cut(s)	1223
EcoRI	GAATTC	1 cut(s)	1232
EcoRII	CCWGG	1 cut(s)	904
EcoT14I	CCWWGG	2 cut(s)	688, 1353
EcoT22I	ATGCAT	1 cut(s)	1630
EcoT38I	GRGCYC	1 cut(s)	596
ErhI	CCWWGG	2 cut(s)	688, 1353
Esp3I	CGTCTC	1 cut(s)	384
FaeI	CATG	6 cut(s)	775, 1373, 1580, 1844, 1878, 1912
FalI	AAGNNNNNCTT	2 cut(s)	1975, 2007
FatI	CATG	6 cut(s)	771, 1369, 1576, 1840, 1874, 1908
FauI	CCCGC	1 cut(s)	1770
Fnu4HI	GCNGC	8 cut(s)	152, 284, 721, 1199, 1261, 1766, 1869, 1872
FokI	GGATG	6 cut(s)	151, 643, 843, 1161, 1187, 1449
FriOI	GRGCYC	1 cut(s)	596
Fsp4HI	GCNGC	8 cut(s)	152, 284, 721, 1199, 1261, 1766, 1869, 1872
FspBI	CTAG	7 cut(s)	120, 627, 663, 1508, 1551, 1613, 1730
GlaI	GCGC	4 cut(s)	777, 1617, 1758, 1760
GluI	GCNGC	8 cut(s)	152, 284, 721, 1199, 1261, 1766, 1869, 1872
GsuI	CTGGAG	3 cut(s)	162, 300, 450
HaeII	RGCGCY	2 cut(s)	779, 1619
HaeIII	GGCC	2 cut(s)	1065, 2140
HapII	CCGG	6 cut(s)	440, 569, 759, 1411, 1619, 1788
HhaI	GCGC	4 cut(s)	778, 1618, 1759, 1761
Hin1I	GRCGYC	1 cut(s)	293
Hin1II	CATG	6 cut(s)	775, 1373, 1580, 1844, 1878, 1912
Hin6I	GCGC	4 cut(s)	776, 1616, 1757, 1759
HinP1I	GCGC	4 cut(s)	776, 1616, 1757, 1759
HincII	GTYRAC	1 cut(s)	1714
HindII	GTYRAC	1 cut(s)	1714
HpaII	CCGG	6 cut(s)	440, 569, 759, 1411, 1619, 1788
HphI	GGTGA	6 cut(s)	24, 438, 489, 501, 1235, 2063
Hpy166II	GTNNAC	4 cut(s)	125, 632, 1217, 1714
Hpy8I	GTNNAC	4 cut(s)	125, 632, 1217, 1714
Hpy99I	CGWCG	5 cut(s)	295, 412, 418, 1943, 2157
HpyAV	CCTTC	7 cut(s)	213, 252, 285, 318, 633, 1130, 1612
HpyCH4III	ACNGT	9 cut(s)	453, 607, 846, 896, 983, 1229, 1460, 2081, 2157
HpyCH4IV	ACGT	1 cut(s)	293
HpyCH4V	TGCA	6 cut(s)	1024, 1171, 1302, 1369, 1628, 1874
HpySE526I	ACGT	1 cut(s)	293
Hsp92I	GRCGYC	1 cut(s)	293
Hsp92II	CATG	6 cut(s)	775, 1373, 1580, 1844, 1878, 1912
HspAI	GCGC	4 cut(s)	776, 1616, 1757, 1759
Kpn2I	TCCGGA	1 cut(s)	1410
KpnI	GGTACC	1 cut(s)	1612
Kzo9I	GATC	8 cut(s)	385, 484, 901, 1251, 1413, 1424, 1652, 1857
LguI	GCTCTTC	3 cut(s)	99, 1080, 2110
LmnI	GCTCC	6 cut(s)	64, 346, 475, 589, 1357, 1837
Lsp1109I	GCAGC	3 cut(s)	1210, 1752, 1858
LweI	GCATC	3 cut(s)	488, 1369, 1637
MaeI	CTAG	7 cut(s)	120, 627, 663, 1508, 1551, 1613, 1730
MaeII	ACGT	1 cut(s)	293
MaeIII	GTNAC	5 cut(s)	453, 1079, 1223, 1295, 1693
MalI	GATC	8 cut(s)	387, 486, 903, 1253, 1415, 1426, 1654, 1859
MbiI	CCGCTC	1 cut(s)	59
MboI	GATC	8 cut(s)	385, 484, 901, 1251, 1413, 1424, 1652, 1857
MflI	RGATCY	4 cut(s)	385, 484, 901, 1652
MhlI	GDGCHC	1 cut(s)	596
MlsI	TGGCCA	1 cut(s)	1065
MluCI	AATT	7 cut(s)	493, 862, 949, 1232, 1640, 1974, 2027
MluNI	TGGCCA	1 cut(s)	1065
Mox20I	TGGCCA	1 cut(s)	1065
Mph1103I	ATGCAT	1 cut(s)	1630
MroI	TCCGGA	1 cut(s)	1410
MscI	TGGCCA	1 cut(s)	1065
MseI	TTAA	4 cut(s)	873, 1194, 1203, 1796
MslI	CAYNNNNRTG	1 cut(s)	1368
Msp20I	TGGCCA	1 cut(s)	1065
MspA1I	CMGCKG	6 cut(s)	50, 131, 154, 995, 1765, 1871
MspI	CCGG	6 cut(s)	440, 569, 759, 1411, 1619, 1788
MspR9I	CCNGG	2 cut(s)	440, 906
MvaI	CCWGG	1 cut(s)	906
MvnI	CGCG	2 cut(s)	1263, 1759
NciI	CCSGG	1 cut(s)	440
NdeII	GATC	8 cut(s)	385, 484, 901, 1251, 1413, 1424, 1652, 1857
NlaIII	CATG	6 cut(s)	775, 1373, 1580, 1844, 1878, 1912
NlaIV	GGNNCC	3 cut(s)	430, 1600, 1610
NmeAIII	GCCGAG	3 cut(s)	48, 615, 2116
NmuCI	GTSAC	1 cut(s)	1223
NsiI	ATGCAT	1 cut(s)	1630
NspI	RCATGY	1 cut(s)	1878
PalAI	GGCGCGCC	1 cut(s)	1757
PaqCI	CACCTGC	1 cut(s)	346
PauI	GCGCGC	1 cut(s)	1757
PciSI	GCTCTTC	3 cut(s)	99, 1080, 2110
PcsI	WCGNNNNNNNCGW	1 cut(s)	416
PkrI	GCNGC	8 cut(s)	153, 285, 722, 1200, 1262, 1767, 1870, 1873
PpuMI	RGGWCCY	1 cut(s)	428
Psp5II	RGGWCCY	1 cut(s)	428
Psp6I	CCWGG	1 cut(s)	904
PspEI	GGTNACC	1 cut(s)	1223
PspGI	CCWGG	1 cut(s)	904
PspN4I	GGNNCC	3 cut(s)	430, 1600, 1610
PspPI	GGNCC	5 cut(s)	428, 551, 632, 926, 1892
PspPPI	RGGWCCY	1 cut(s)	428
PstNI	CAGNNNCTG	1 cut(s)	1871
PsuI	RGATCY	4 cut(s)	385, 484, 901, 1652
PteI	GCGCGC	1 cut(s)	1757
PvuII	CAGCTG	3 cut(s)	50, 131, 995
RsaI	GTAC	6 cut(s)	609, 848, 991, 1165, 1610, 2078
RsaNI	GTAC	6 cut(s)	608, 847, 990, 1164, 1609, 2077
RseI	CAYNNNNRTG	1 cut(s)	1368
SapI	GCTCTTC	3 cut(s)	99, 1080, 2110
SaqAI	TTAA	4 cut(s)	873, 1194, 1203, 1796
SatI	GCNGC	8 cut(s)	152, 284, 721, 1199, 1261, 1766, 1869, 1872
Sau3AI	GATC	8 cut(s)	385, 484, 901, 1251, 1413, 1424, 1652, 1857
Sau96I	GGNCC	5 cut(s)	428, 551, 632, 926, 1892
ScaI	AGTACT	1 cut(s)	848
ScrFI	CCNGG	2 cut(s)	440, 906
SduI	GDGCHC	1 cut(s)	596
SfaNI	GCATC	3 cut(s)	488, 1369, 1637
SfcI	CTRYAG	2 cut(s)	753, 1419
SgsI	GGCGCGCC	1 cut(s)	1757
SinI	GGWCC	5 cut(s)	428, 551, 632, 926, 1892
SmiMI	CAYNNNNRTG	1 cut(s)	1368
SmlI	CTYRAG	1 cut(s)	381
SmoI	CTYRAG	1 cut(s)	381
Sse9I	AATT	7 cut(s)	493, 862, 949, 1232, 1640, 1974, 2027
SspI	AATATT	1 cut(s)	1501
SspMI	CTAG	7 cut(s)	120, 627, 663, 1508, 1551, 1613, 1730
StyD4I	CCNGG	2 cut(s)	438, 904
StyI	CCWWGG	2 cut(s)	688, 1353
TaaI	ACNGT	9 cut(s)	453, 607, 846, 896, 983, 1229, 1460, 2081, 2157
TaiI	ACGT	1 cut(s)	296
TaqI	TCGA	2 cut(s)	206, 1860
TasI	AATT	7 cut(s)	493, 862, 949, 1232, 1640, 1974, 2027
TatI	WGTACW	2 cut(s)	846, 2076
TauI	GCSGC	5 cut(s)	154, 286, 723, 1263, 1871
Tru1I	TTAA	4 cut(s)	873, 1194, 1203, 1796
Tru9I	TTAA	4 cut(s)	873, 1194, 1203, 1796
TscAI	CASTG	1 cut(s)	2086
TseFI	GTSAC	1 cut(s)	1223
TseI	GCWGC	3 cut(s)	1198, 1765, 1871
Tsp45I	GTSAC	1 cut(s)	1223
TspDTI	ATGAA	9 cut(s)	126, 366, 1256, 1530, 1536, 1857, 2028, 2039, 2139
TspGWI	ACGGA	4 cut(s)	366, 1717, 1956, 1980
TspRI	CASTG	1 cut(s)	2086
VpaK11BI	GGWCC	5 cut(s)	428, 551, 632, 926, 1892
XagI	CCTNNNNNAGG	1 cut(s)	666
XapI	RAATTY	3 cut(s)	493, 1232, 2027
XbaI	TCTAGA	1 cut(s)	1507
XceI	RCATGY	1 cut(s)	1878
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1392
XspI	CTAG	7 cut(s)	120, 627, 663, 1508, 1551, 1613, 1730
ZraI	GACGTC	1 cut(s)	294
ZrmI	AGTACT	1 cut(s)	848
Zsp2I	ATGCAT	1 cut(s)	1630

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.