Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000004

Orthogroup ID

OG0001835

Physical Location & Seq

Genomic Coordinates Reverse (-)

51944842 .. 51950599

Gene Structure 5758 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug04G0347100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1896 bp

ATGAAGTTTATGAAACTTGGATCTAGGCCAGATACTTTCTACACTTCTGAGGCTATAAGGTCAGTTTCTTCTGAAGTTTCAAGTGATCTCATAATTCAAGTTAAGGGAAGCAGATATTTGCTCCACAAGTTTCCACTTCTGTCAAAGTGTTTGAGGCTGCAGAGGCTCTGCTCTGAATATGCGGAAACCTCGCAACACCAGATAATCCAACTGCGTGATTTTCCAAGTGGAGTTGAGGCATTCGAGCTCTGCGCAAAATTCTGCTATGGAATCACAATCACGCTCAGTGCCCACAACATTGTAGCTGCTCGCTGCGCCGCAGAGTACTTGCAGATGACTGAGGAAGTTGAGAAGGGAAACTTGATATATAAGCTTGAGGTCTTCTTCAACTCTTGCATACTTCATGGCTGGAGGGACTCAATTGCCACTCTGCAAAGCACCAAGGCCTTTCCTCTGTGGTCTGAGGACCTTGGAATCACAGGCAGATGTATAGACACAATTGCCTCCAAAGTCATAACACACCCTTCAAAGGTTAGCTTGTCACATAGCTACTCCCGGAGGGGAAGAGACGACGTGTCATGCAATGGTGCCGAGAGTCTGAGGCATGGCAAACCTGGAAACAAGGGGTGGTGGGCTGAGGATATTGCAGAATTGGGAATAGACCTTTTCTGGAGGACCATGATTGGTATTAAATCTGGTGGAAGAATACCCTCTAATCTCATAGGTGATGCATTGAAAATCTACGCAGCAAAATGGCTACCCAACATATCAAAAAATGAGTACAGCAAACAAGCAGCATCGACATCTGATTCGGATTCAGACTCGGGGAATGATTTGACTTCAAAGCATAGGCTGATCTTGGAGACAATTGTGAGCTTAGTTCCGGCTGAGAAAGGTGCTACTTCTAGCAGTTTCTTGCTCAAACTGTTGAAGGCAGCCAATATTCTCAATGCCTCTTCCTCTTCCAAAATGGAATTGGCTAGAAGAGTTGGGCTTCAATTAGAGGAGGCAACAGTTGGTGACTTGTTAATACCATCTGTACCATATGAAGCTAAGGGTACTCGATACGATGTAGACATTGTTATGACCATTTTGGAGCAGTTCAAGTTACAAGGGCAGAGTCCCCCTACTAGTCCTCCAAGGTCCAAGCTTGGTAATTTCCAGAGGAGGAGGTCTAGGTCGGCTGAGAACATCGATTTCGAGTTTCAGGAGAGCCGAAGATCATCTTCAGCGTCACATAGCTCAAAGCTGAAAGTGGCAAAGCTTGTGGATGTGTATCTTCAGGAAATTGGCAGGGATGTAAATTTGCCTCTGGCAAAGTTTATTGCGATTGCTGAGGCATTACCAGAATTTGCCAGGGTTGATCATGATGACCTTTACAAAGCAATTGACATTTACCTTAAGGCACATCCAGACCTGAACAAGAGTGAAAGGAAAAGGCTGTGTAGAATCCTAGACTGCAAAAAGCTGTCAATGGAGGCCTGCATGCATGCTGCACAAAATGAGCTACTTCCACTAAGAGTGGTGGTCCAAGTTCTCTTCTTCGAGCAAGCTAGAGCCGCCATGGCGGGCGGCAAAGTGACCGAGTTGCCGAGCAACATAAGGGCTCTGCTAGCCTCACACGACATTGACCCAACACGGCCTCCACCGCCCTTAAGTGCCTCTAGCATCATTCCTGCAGAGGATCAATGGAGTGTCTCGGGCCTTAAGTCACCCAAATCGAAGATGTCAACGCTACGAATGAAGCTAGAGGAAGACGATGATCTTGATGACAATGGGATTGGGAGAAGCTCAAGGCTTAAGGCTCTCTGCTTACTGCCTACAAGACCCAAAAGAATGCTCAGTAAGTTGTGGTCCATCAACAGAAGTAGCACTACTGCAAGTGAAAAGAACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005488 GO:0005515 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0019899 GO:0019900 GO:0019901 GO:0023052 GO:0032502 GO:0036211 GO:0038023 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060089 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164

Pfam Domains

Protein Families

Pkinase Pkinase_Tyr

Protein Analysis

631

Amino Acids

70.16

Weight (kDa)

9.03

Isoelectric Point (pI)

55.97

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
NPH3	PF03000	210 - 495	2e-90	NPH3 family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001835)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G14720 AT5G14720
fragaria_vesca	FvH4_4g34360 FvH4_4g34360 FvH4_6g50820 FvH4_6g50820 FvH4_6g50820 FvH4_6g50820 FvH4_6g50820
malus_domestica	MD09G1031900.v1.1 MD09G1032000.v1.1 MD16G1093600.v1.1 MD17G1033700.v1.1
prunus_persica	Prupe.1G252900_v2.0.a1 Prupe.1G252900_v2.0.a1 Prupe.1G252900_v2.0.a1 Prupe.1G252900_v2.0.a1 Prupe.1G252900_v2.0.a1 Prupe.3G286000_v2.0.a1 Prupe.3G286000_v2.0.a1 Prupe.3G286000_v2.0.a1 Prupe.3G286000_v2.0.a1
pyrus_communis	pycom111g02520 pycom16g07960 pycom17g03080
rosa_chinensis	RchiOBHm_Chr2g0172211 RchiOBHm_Chr4g0443771
rosa_laevigata	RLG00000005891 RLG00000022093
rosa_multiflora	Rmu_co8491651.1_g000001 Rmu_ssc0000252.1_g000052
rosa_roxburghii	Rroxscaffold_2G00080080 Rroxscaffold_5G00384340
rosa_rugosa	Rorug02G0557300 Rorug02G0557400 Rorug04G0347100
rosa_samantha	Rh2AG632700 Rh2BG646300 Rh2CG612900 Rh2DG653800 Rh2DG660900 Rh4AG407400 Rh4BG418300 Rh4CG432400 Rh4DG413600
rosa_wichuraiana	Rw2G052380 Rw4G034990

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	253
AccB1I	GGYRCC	1 cut(s)	587
AccI	GTMKAC	1 cut(s)	1074
AciI	CCGC	6 cut(s)	182, 318, 1560, 1568, 1572, 1649
AclWI	GGATC	2 cut(s)	28, 1692
AcsI	RAATTY	3 cut(s)	257, 1303, 1349
AcuI	CTGAAG	3 cut(s)	93, 1212, 1265
AfaI	GTAC	4 cut(s)	326, 782, 1041, 1060
AfiI	CCNNNNNNNGG	1 cut(s)	529
AflII	CTTAAG	4 cut(s)	1400, 1654, 1706, 1799
AflIII	ACRYGT	1 cut(s)	573
AgsI	TTSAA	9 cut(s)	81, 98, 388, 528, 736, 843, 931, 998, 1105
AhdI	GACNNNNNGTC	1 cut(s)	574
AhlI	ACTAGT	1 cut(s)	1130
AjiI	CACGTC	1 cut(s)	574
AjnI	CCWGG	2 cut(s)	613, 1355
Alw21I	GWGCWC	1 cut(s)	249
Alw26I	GTCTC	3 cut(s)	561, 857, 1702
AlwI	GGATC	2 cut(s)	28, 1692
Ama87I	CYCGRG	2 cut(s)	823, 1699
AoxI	GGCC	5 cut(s)	26, 444, 1479, 1640, 1702
ApeKI	GCWGC	7 cut(s)	157, 305, 312, 746, 794, 935, 1493
ApoI	RAATTY	3 cut(s)	257, 1303, 1349
ArsI	GACNNNNNNTTYG	2 cut(s)	793, 825
AspLEI	GCGC	2 cut(s)	254, 317
AspS9I	GGNCC	6 cut(s)	466, 675, 1143, 1528, 1702, 1854
AsuC2I	CCSGG	1 cut(s)	556
AsuHPI	GGTGA	3 cut(s)	737, 1031, 1704
AsuNHI	GCTAGC	1 cut(s)	1612
AvaI	CYCGRG	2 cut(s)	823, 1699
AvaII	GGWCC	5 cut(s)	466, 675, 1143, 1528, 1854
BaeGI	GKGCMC	1 cut(s)	292
BanI	GGYRCC	1 cut(s)	587
BanII	GRGCYC	2 cut(s)	249, 1609
BarI	GAAGNNNNNNTAC	2 cut(s)	1858, 1890
BbsI	GAAGAC	2 cut(s)	373, 1761
Bbv12I	GWGCWC	1 cut(s)	249
BbvCI	CCTCAGC	2 cut(s)	636, 1335
BbvI	GCAGC	7 cut(s)	144, 292, 299, 758, 806, 947, 1480
BccI	CCATC	2 cut(s)	1042, 1865
BceAI	ACGGC	1 cut(s)	1655
BciT130I	CCWGG	2 cut(s)	615, 1357
BclI	TGATCA	1 cut(s)	1363
BcnI	CCSGG	1 cut(s)	556
BcoDI	GTCTC	3 cut(s)	561, 857, 1702
BcuI	ACTAGT	1 cut(s)	1130
BfmI	CTRYAG	2 cut(s)	158, 1677
BfrI	CTTAAG	4 cut(s)	1400, 1654, 1706, 1799
BglI	GCCNNNNNGGC	1 cut(s)	1565
BmcAI	AGTACT	1 cut(s)	326
Bme1390I	CCNGG	3 cut(s)	556, 615, 1357
Bme18I	GGWCC	5 cut(s)	466, 675, 1143, 1528, 1854
BmeRI	GACNNNNNGTC	1 cut(s)	574
BmeT110I	CYCGRG	2 cut(s)	823, 1699
BmgBI	CACGTC	1 cut(s)	574
BmgT120I	GGNCC	6 cut(s)	466, 675, 1143, 1528, 1702, 1854
BmiI	GGNNCC	1 cut(s)	589
BmrFI	CCNGG	3 cut(s)	556, 615, 1357
BmsI	GCATC	3 cut(s)	718, 806, 1677
BmtI	GCTAGC	1 cut(s)	1616
BpiI	GAAGAC	2 cut(s)	373, 1761
BpmI	CTGGAG	2 cut(s)	430, 691
Bpu10I	CCTNAGC	3 cut(s)	636, 1053, 1335
BpuEI	CTTGAG	2 cut(s)	395, 1777
BpuMI	CCSGG	1 cut(s)	556
Bsa29I	ATCGAT	1 cut(s)	1194
BsaBI	GATNNNNATC	1 cut(s)	1275
BsaJI	CCNNGG	5 cut(s)	441, 469, 1139, 1356, 1563
BsaXI	ACNNNNNCTCC	4 cut(s)	1120, 1150, 1627, 1657
Bsc4I	CCNNNNNNNGG	1 cut(s)	529
Bse3DI	GCAATG	1 cut(s)	589
Bse8I	GATNNNNATC	1 cut(s)	1275
BseBI	CCWGG	2 cut(s)	615, 1357
BseCI	ATCGAT	1 cut(s)	1194
BseDI	CCNNGG	5 cut(s)	441, 469, 1139, 1356, 1563
BseGI	GGATG	3 cut(s)	1276, 1303, 1408
BseJI	GATNNNNATC	1 cut(s)	1275
BseLI	CCNNNNNNNGG	1 cut(s)	529
BseMI	GCAATG	1 cut(s)	589
BseRI	GAGGAG	3 cut(s)	1019, 1180, 1183
BseSI	GKGCMC	1 cut(s)	292
BseXI	GCAGC	7 cut(s)	144, 292, 299, 758, 806, 947, 1480
BsgI	GTGCAG	1 cut(s)	1479
BshFI	GGCC	5 cut(s)	28, 446, 1481, 1642, 1704
BshNI	GGYRCC	1 cut(s)	587
BshVI	ATCGAT	1 cut(s)	1194
BsiHKAI	GWGCWC	1 cut(s)	249
BsiHKCI	CYCGRG	2 cut(s)	823, 1699
BsiSI	CCGG	2 cut(s)	556, 884
BslFI	GGGAC	2 cut(s)	428, 1107
BslI	CCNNNNNNNGG	1 cut(s)	529
BsmAI	GTCTC	3 cut(s)	561, 857, 1702
BsmBI	CGTCTC	1 cut(s)	561
BsmFI	GGGAC	2 cut(s)	428, 1107
BsmI	GAATGC	2 cut(s)	239, 1842
BsnI	GGCC	5 cut(s)	28, 446, 1481, 1642, 1704
BsoBI	CYCGRG	2 cut(s)	823, 1699
Bsp1286I	GDGCHC	3 cut(s)	249, 292, 1609
Bsp143I	GATC	7 cut(s)	20, 85, 855, 1220, 1363, 1684, 1762
Bsp19I	CCATGG	1 cut(s)	1563
BspACI	CCGC	6 cut(s)	182, 318, 1560, 1568, 1572, 1649
BspANI	GGCC	5 cut(s)	28, 446, 1481, 1642, 1704
BspDI	ATCGAT	1 cut(s)	1194
BspHI	TCATGA	1 cut(s)	1366
BspLI	GGNNCC	1 cut(s)	589
BspMAI	CTGCAG	2 cut(s)	162, 1681
BspOI	GCTAGC	1 cut(s)	1616
BspPI	GGATC	2 cut(s)	28, 1692
BspT107I	GGYRCC	1 cut(s)	587
BspTI	CTTAAG	4 cut(s)	1400, 1654, 1706, 1799
BsrDI	GCAATG	1 cut(s)	589
BssECI	CCNNGG	5 cut(s)	441, 469, 1139, 1356, 1563
BssMI	GATC	7 cut(s)	20, 85, 855, 1220, 1363, 1684, 1762
BssT1I	CCWWGG	4 cut(s)	441, 469, 1139, 1563
Bst2UI	CCWGG	2 cut(s)	615, 1357
Bst4CI	ACNGT	2 cut(s)	927, 1015
Bst6I	CTCTTC	5 cut(s)	559, 961, 967, 979, 1544
BstAFI	CTTAAG	4 cut(s)	1400, 1654, 1706, 1799
BstC8I	GCNNGC	7 cut(s)	310, 1483, 1487, 1491, 1551, 1570, 1614
BstDSI	CCRYGG	1 cut(s)	1563
BstF5I	GGATG	3 cut(s)	1276, 1303, 1408
BstHHI	GCGC	2 cut(s)	254, 317
BstKTI	GATC	7 cut(s)	23, 88, 858, 1223, 1366, 1687, 1765
BstMAI	GTCTC	3 cut(s)	561, 857, 1702
BstMBI	GATC	7 cut(s)	20, 85, 855, 1220, 1363, 1684, 1762
BstMWI	GCNNNNNNNGC	6 cut(s)	163, 314, 1559, 1565, 1613, 1648
BstNI	CCWGG	2 cut(s)	615, 1357
BstNSI	RCATGY	2 cut(s)	1489, 1493
BstSCI	CCNGG	3 cut(s)	554, 613, 1355
BstSFI	CTRYAG	2 cut(s)	158, 1677
BstSLI	GKGCMC	1 cut(s)	292
BstV1I	GCAGC	7 cut(s)	144, 292, 299, 758, 806, 947, 1480
BstV2I	GAAGAC	2 cut(s)	373, 1761
BstX2I	RGATCY	1 cut(s)	20
BstYI	RGATCY	1 cut(s)	20
Bsu15I	ATCGAT	1 cut(s)	1194
BsuRI	GGCC	5 cut(s)	28, 446, 1481, 1642, 1704
BsuTUI	ATCGAT	1 cut(s)	1194
BtgI	CCRYGG	1 cut(s)	1563
BtrI	CACGTC	1 cut(s)	574
BtsCI	GGATG	3 cut(s)	1276, 1303, 1408
BtsIMutI	CAGTG	1 cut(s)	292
Cac8I	GCNNGC	7 cut(s)	310, 1483, 1487, 1491, 1551, 1570, 1614
CciI	TCATGA	1 cut(s)	1366
CfoI	GCGC	2 cut(s)	254, 317
Cfr13I	GGNCC	6 cut(s)	466, 675, 1143, 1528, 1702, 1854
ClaI	ATCGAT	1 cut(s)	1194
CseI	GACGC	1 cut(s)	1221
Csp6I	GTAC	4 cut(s)	325, 781, 1040, 1059
CspCI	CAANNNNNGTGG	2 cut(s)	1248, 1283
CviAII	CATG	8 cut(s)	404, 579, 605, 679, 1367, 1486, 1490, 1564
CviQI	GTAC	4 cut(s)	325, 781, 1040, 1059
DpnI	GATC	7 cut(s)	22, 87, 857, 1222, 1365, 1686, 1764
DpnII	GATC	7 cut(s)	20, 85, 855, 1220, 1363, 1684, 1762
DriI	GACNNNNNGTC	1 cut(s)	574
Eam1104I	CTCTTC	5 cut(s)	559, 961, 967, 979, 1544
Eam1105I	GACNNNNNGTC	1 cut(s)	574
EarI	CTCTTC	5 cut(s)	559, 961, 967, 979, 1544
Ecl136II	GAGCTC	1 cut(s)	247
Eco130I	CCWWGG	4 cut(s)	441, 469, 1139, 1563
Eco147I	AGGCCT	2 cut(s)	446, 1481
Eco24I	GRGCYC	2 cut(s)	249, 1609
Eco47I	GGWCC	5 cut(s)	466, 675, 1143, 1528, 1854
Eco53kI	GAGCTC	1 cut(s)	247
Eco57I	CTGAAG	3 cut(s)	93, 1212, 1265
Eco88I	CYCGRG	2 cut(s)	823, 1699
EcoICRI	GAGCTC	1 cut(s)	247
EcoO109I	RGGNCCY	1 cut(s)	466
EcoRII	CCWGG	2 cut(s)	613, 1355
EcoT14I	CCWWGG	4 cut(s)	441, 469, 1139, 1563
EcoT22I	ATGCAT	2 cut(s)	733, 1491
EcoT38I	GRGCYC	2 cut(s)	249, 1609
ErhI	CCWWGG	4 cut(s)	441, 469, 1139, 1563
Esp3I	CGTCTC	1 cut(s)	561
FaeI	CATG	8 cut(s)	407, 582, 608, 682, 1370, 1489, 1493, 1567
FalI	AAGNNNNNCTT	6 cut(s)	344, 376, 521, 553, 1210, 1242
FaqI	GGGAC	2 cut(s)	428, 1107
FatI	CATG	8 cut(s)	403, 578, 604, 678, 1366, 1485, 1489, 1563
FauI	CCCGC	1 cut(s)	1561
FauNDI	CATATG	1 cut(s)	1045
FbaI	TGATCA	1 cut(s)	1363
FblI	GTMKAC	1 cut(s)	1074
FokI	GGATG	3 cut(s)	1283, 1310, 1395
FriOI	GRGCYC	2 cut(s)	249, 1609
FspI	TGCGCA	1 cut(s)	253
GlaI	GCGC	2 cut(s)	253, 316
GsuI	CTGGAG	2 cut(s)	430, 691
HaeIII	GGCC	5 cut(s)	28, 446, 1481, 1642, 1704
HapII	CCGG	2 cut(s)	556, 884
HgaI	GACGC	1 cut(s)	1221
HhaI	GCGC	2 cut(s)	254, 317
Hin1II	CATG	8 cut(s)	407, 582, 608, 682, 1370, 1489, 1493, 1567
Hin6I	GCGC	2 cut(s)	252, 315
HinP1I	GCGC	2 cut(s)	252, 315
HincII	GTYRAC	1 cut(s)	1731
HindII	GTYRAC	1 cut(s)	1731
HindIII	AAGCTT	3 cut(s)	371, 1148, 1262
HinfI	GANTC	9 cut(s)	270, 416, 474, 595, 809, 815, 821, 1120, 1449
HpaII	CCGG	2 cut(s)	556, 884
HphI	GGTGA	3 cut(s)	737, 1031, 1704
Hpy166II	GTNNAC	2 cut(s)	1075, 1731
Hpy188I	TCNGA	8 cut(s)	49, 73, 175, 463, 600, 808, 814, 820
Hpy188III	TCNNGA	7 cut(s)	670, 1162, 1208, 1283, 1367, 1412, 1766
Hpy8I	GTNNAC	2 cut(s)	1075, 1731
Hpy99I	CGWCG	1 cut(s)	575
HpyAV	CCTTC	3 cut(s)	346, 534, 925
HpyCH4III	ACNGT	2 cut(s)	927, 1015
HpyCH4IV	ACGT	1 cut(s)	573
HpyF10VI	GCNNNNNNNGC	6 cut(s)	163, 314, 1559, 1565, 1613, 1648
HpySE526I	ACGT	1 cut(s)	573
Hsp92II	CATG	8 cut(s)	407, 582, 608, 682, 1370, 1489, 1493, 1567
HspAI	GCGC	2 cut(s)	252, 315
Ksp22I	TGATCA	1 cut(s)	1363
Kzo9I	GATC	7 cut(s)	20, 85, 855, 1220, 1363, 1684, 1762
LmnI	GCTCC	2 cut(s)	126, 1096
Lsp1109I	GCAGC	7 cut(s)	144, 292, 299, 758, 806, 947, 1480
LweI	GCATC	3 cut(s)	718, 806, 1677
MaeII	ACGT	1 cut(s)	573
MaeIII	GTNAC	6 cut(s)	540, 1019, 1107, 1233, 1579, 1710
MalI	GATC	7 cut(s)	22, 87, 857, 1222, 1365, 1686, 1764
MboI	GATC	7 cut(s)	20, 85, 855, 1220, 1363, 1684, 1762
MfeI	CAATTG	4 cut(s)	420, 498, 867, 1386
MflI	RGATCY	1 cut(s)	20
MhlI	GDGCHC	3 cut(s)	249, 292, 1609
MlyI	GAGTC	4 cut(s)	410, 604, 815, 1129
MmeI	TCCRAC	1 cut(s)	232
Mph1103I	ATGCAT	2 cut(s)	733, 1491
MseI	TTAA	7 cut(s)	102, 690, 1028, 1401, 1655, 1707, 1800
MslI	CAYNNNNRTG	1 cut(s)	1082
MspCI	CTTAAG	4 cut(s)	1400, 1654, 1706, 1799
MspI	CCGG	2 cut(s)	556, 884
MspR9I	CCNGG	3 cut(s)	556, 615, 1357
MunI	CAATTG	4 cut(s)	420, 498, 867, 1386
Mva1269I	GAATGC	2 cut(s)	239, 1842
MvaI	CCWGG	2 cut(s)	615, 1357
MwoI	GCNNNNNNNGC	6 cut(s)	163, 314, 1559, 1565, 1613, 1648
NciI	CCSGG	1 cut(s)	556
NcoI	CCATGG	1 cut(s)	1563
NdeI	CATATG	1 cut(s)	1045
NdeII	GATC	7 cut(s)	20, 85, 855, 1220, 1363, 1684, 1762
NheI	GCTAGC	1 cut(s)	1612
NlaIII	CATG	8 cut(s)	407, 582, 608, 682, 1370, 1489, 1493, 1567
NlaIV	GGNNCC	1 cut(s)	589
NmeAIII	GCCGAG	2 cut(s)	616, 1617
NmuCI	GTSAC	5 cut(s)	540, 1019, 1233, 1579, 1710
NsbI	TGCGCA	1 cut(s)	253
NsiI	ATGCAT	2 cut(s)	733, 1491
NspI	RCATGY	2 cut(s)	1489, 1493
PaeI	GCATGC	2 cut(s)	1489, 1493
PagI	TCATGA	1 cut(s)	1366
PceI	AGGCCT	2 cut(s)	446, 1481
PctI	GAATGC	2 cut(s)	239, 1842
PfeI	GAWTC	5 cut(s)	270, 474, 809, 815, 1449
PfoI	TCCNGGA	1 cut(s)	554
PleI	GAGTC	4 cut(s)	410, 603, 815, 1128
PpsI	GAGTC	4 cut(s)	410, 603, 815, 1128
PpuMI	RGGWCCY	1 cut(s)	466
Psp124BI	GAGCTC	1 cut(s)	249
Psp5II	RGGWCCY	1 cut(s)	466
Psp6I	CCWGG	2 cut(s)	613, 1355
PspGI	CCWGG	2 cut(s)	613, 1355
PspN4I	GGNNCC	1 cut(s)	589
PspPI	GGNCC	6 cut(s)	466, 675, 1143, 1528, 1702, 1854
PspPPI	RGGWCCY	1 cut(s)	466
PstI	CTGCAG	2 cut(s)	162, 1681
PsuI	RGATCY	1 cut(s)	20
RsaI	GTAC	4 cut(s)	326, 782, 1041, 1060
RsaNI	GTAC	4 cut(s)	325, 781, 1040, 1059
RseI	CAYNNNNRTG	1 cut(s)	1082
SacI	GAGCTC	1 cut(s)	249
SaqAI	TTAA	7 cut(s)	102, 690, 1028, 1401, 1655, 1707, 1800
Sau3AI	GATC	7 cut(s)	20, 85, 855, 1220, 1363, 1684, 1762
Sau96I	GGNCC	6 cut(s)	466, 675, 1143, 1528, 1702, 1854
ScaI	AGTACT	1 cut(s)	326
SchI	GAGTC	4 cut(s)	410, 604, 815, 1129
ScrFI	CCNGG	3 cut(s)	556, 615, 1357
SduI	GDGCHC	3 cut(s)	249, 292, 1609
SfaNI	GCATC	3 cut(s)	718, 806, 1677
SfcI	CTRYAG	2 cut(s)	158, 1677
SinI	GGWCC	5 cut(s)	466, 675, 1143, 1528, 1854
SmiMI	CAYNNNNRTG	1 cut(s)	1082
SmlI	CTYRAG	6 cut(s)	374, 1400, 1654, 1706, 1792, 1799
SmoI	CTYRAG	6 cut(s)	374, 1400, 1654, 1706, 1792, 1799
SpeI	ACTAGT	1 cut(s)	1130
SphI	GCATGC	2 cut(s)	1489, 1493
SseBI	AGGCCT	2 cut(s)	446, 1481
SsiI	CCGC	6 cut(s)	182, 318, 1560, 1568, 1572, 1649
SspI	AATATT	1 cut(s)	943
SstI	GAGCTC	1 cut(s)	249
StuI	AGGCCT	2 cut(s)	446, 1481
StyD4I	CCNGG	3 cut(s)	554, 613, 1355
StyI	CCWWGG	4 cut(s)	441, 469, 1139, 1563
TaaI	ACNGT	2 cut(s)	927, 1015
TaiI	ACGT	1 cut(s)	576
TaqI	TCGA	7 cut(s)	243, 800, 1063, 1194, 1200, 1545, 1721
TaqII	GACCGA	1 cut(s)	1598
TatI	WGTACW	2 cut(s)	324, 780
TauI	GCSGC	3 cut(s)	320, 1562, 1575
TfiI	GAWTC	5 cut(s)	270, 474, 809, 815, 1449
Tru1I	TTAA	7 cut(s)	102, 690, 1028, 1401, 1655, 1707, 1800
Tru9I	TTAA	7 cut(s)	102, 690, 1028, 1401, 1655, 1707, 1800
TscAI	CASTG	1 cut(s)	292
TseFI	GTSAC	5 cut(s)	540, 1019, 1233, 1579, 1710
TseI	GCWGC	7 cut(s)	157, 305, 312, 746, 794, 935, 1493
Tsp45I	GTSAC	5 cut(s)	540, 1019, 1233, 1579, 1710
TspDTI	ATGAA	5 cut(s)	17, 26, 392, 1062, 1757
TspRI	CASTG	1 cut(s)	292
Vha464I	CTTAAG	4 cut(s)	1400, 1654, 1706, 1799
VpaK11BI	GGWCC	5 cut(s)	466, 675, 1143, 1528, 1854
XapI	RAATTY	3 cut(s)	257, 1303, 1349
XceI	RCATGY	2 cut(s)	1489, 1493
XcmI	CCANNNNNNNNNTGG	1 cut(s)	973
XmiI	GTMKAC	1 cut(s)	1074
ZrmI	AGTACT	1 cut(s)	326
Zsp2I	ATGCAT	2 cut(s)	733, 1491

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.