Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2D

Orthogroup ID

OG0001835

Physical Location & Seq

Genomic Coordinates Forward (+)

88750874 .. 88759433

Gene Structure 8560 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2DG660900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2040 bp

ATGGAGCAAGTATCAGAGAAAAAATTTCCTTTGGATGCAAAAGAGTATAAGTTATATGAAGAAGTGGGTGAAGGTGTTAGTGCTAGTGTGTACAGAGCACTCTGCGTACCACTTAATGAGATAGTTGCTATCAAGGTTCTTGATCTGGAAAAATGCAATAATGACCTGGATGGTATCCGACGGGAGGTACATACAATGACTTTGATCAATCATCCAAATCTATTACGAGCACATTGTTCGTTCACAGCTGGCCACAGCCTTTGGGTTGTCATGCCATATATGGCTGGGGGGTCCTGCCTTCATATAATGAAGACTTCGTTTCCTGAAGGTTTTGAAGAGCCTGTTATTGCAACTCTATTGCATGAGGTCCTCAAAGCTCTTGTTTATCTTCATGCTCATGGCCATATCCATAGAGATGTGAAGGCTGGGAATATATTGATCGATTCTAATGGTGCAGTCAAGTTAGCTGACTTTGGTGTATCTGCATGCATGTTTGATACTGGAGATAGACAACGTTCCAGAAATACTTTTGTTGGAACTCCTTGCTGGTTCTATATTTCTTCAAATACTCTCTTTTCTCTCAGGATGGCTCCTGAAGTTATGCAGCAATTGCATGGATATGACTTCAAAGCAGACATCTGGTCATTTGGAATAACAGCACTCGAACTTGCCCATGGACATGCCCCATTTTCCAAGTACCCACCAATGAAAGTTTTGCTGATGACTTTACAAAATGCACCGCCAGGCCTTGATTATGAAAGAGACAAAAGATTTTCTAAGTCTTTCAAAGAGCTGGTAGCTGCTTGCTTAGTGAAGGATCCAAAGAAACGTCCCACTTCTGAAAAGCTTTTGAAGCACCATTTTTTCAAACATGCACGACCAGTTGATTATCTATCTCGTACCATCCTTGATGGCCTCTCTCCATTAGGAGATCGTTTTAGGATTCTGAAGGCAAAAGAAGCTGATCTTCTTGTGCAGAATAAGGCTCTCTATGGGGATAAGGAACATTTGTCGCAGCAAGAGTATATCCGAGGAATCAGTGCCTGGAATTTCAACCTTGAAGATTTAAAAAATCAGGCTGCCCTTATTCAGGATCATGGCACGCCACATGAAGGGAGTAAGGAGCAAAGTGACAGCTATGAAGATGTTAATTTTCCAACTGAGAGGTCGACGGTTGAAATGGCAAACCAGTCAAATGCTGCATCTAATCAGGAGGATGGCTTTGACGAGCTTCATGATTTGGACGGCTCACTTGCTTCATTTCCTATTAAACCTCTTCAAGCACTCAAAGGCTGTTTTGATGTTTGTGAGGAGGATGCGAGTGCGACTAGTCCTACAACCATTATTCAAGAAAATGGAAGAAGTGGGGGTGAGACTTCAGGGAAAAGTAGTTCTTTATCACGTCATGACATCCCTGAGCCTAAGAAGTTCATGAGTGGTTCATTACTCCCGGATAATGTGCTTTCTTCTAAAAAGGTTATTGGTGAAGGGGAGAGGGATCATCTACAATCAAAACATCAACCTGAACGGAACTATAGTGGTCCATTGTTGTATCGTCAAAAGAGAGATGCCAATAACCCTACATCTGCTGAGGATATGTCTGAAGGAGCAGTTGTGCAGCGTAAGGGGCGCTTCAAGGTCACTTCAGCAGACCTCAGTCCTAAGGGTTCTTCAAATAGCTTCTTTAGTCCTGTTTCTCTAGGTTCAAGTAGTCCACCATCCTCAAATGTTACAGCTGCCACTGTTCTCCCATCACTACAATGCATGCTGCTGCAAAACACCTCGCAAAGGGAGGAAATAGTAAAATTGATCAAATATGTTGAACAGACCTCTGGTATGCAAGGAGAGATAACCGATGTAAGCACCAGTGACCTTTCGCAGATACCTCCTGCTTCCTGTAGGGAGAGAGAGTTGCAATCTCTGGTGATAAATCTGCAACAGAGTGTTGGGAATCTTGTTGAACAATTACAAAGACAGAAGATGAAAAATGCCCAGTTAGAAAGACAATTGAATGCCTTGGCCAACAAAGACAAGATATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001932 GO:0001934 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0007154 GO:0007165 GO:0007346 GO:0008150 GO:0008152 GO:0009893 GO:0009987 GO:0010562 GO:0010604 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019220 GO:0019222 GO:0019538 GO:0023014 GO:0023052 GO:0031098 GO:0031323 GO:0031325 GO:0031399 GO:0031401 GO:0032147 GO:0032268 GO:0032270 GO:0033554 GO:0033674 GO:0035556 GO:0036211 GO:0042325 GO:0042327 GO:0043085 GO:0043170 GO:0043412 GO:0043549 GO:0044093 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0045859 GO:0045860 GO:0045937 GO:0048518 GO:0048522 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051174 GO:0051246 GO:0051247 GO:0051338 GO:0051347 GO:0051716 GO:0051726 GO:0060255 GO:0065007 GO:0065009 GO:0071704 GO:0080090 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase

Protein Analysis

679

Amino Acids

75.49

Weight (kDa)

6.31

Isoelectric Point (pI)

48.42

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	16 - 289	2.8e-54	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	17 - 285	5.4e-39	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001835)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G14720 AT5G14720
fragaria_vesca	FvH4_4g34360 FvH4_4g34360 FvH4_6g50820 FvH4_6g50820 FvH4_6g50820 FvH4_6g50820 FvH4_6g50820
malus_domestica	MD09G1031900.v1.1 MD09G1032000.v1.1 MD16G1093600.v1.1 MD17G1033700.v1.1
prunus_persica	Prupe.1G252900_v2.0.a1 Prupe.1G252900_v2.0.a1 Prupe.1G252900_v2.0.a1 Prupe.1G252900_v2.0.a1 Prupe.1G252900_v2.0.a1 Prupe.3G286000_v2.0.a1 Prupe.3G286000_v2.0.a1 Prupe.3G286000_v2.0.a1 Prupe.3G286000_v2.0.a1
pyrus_communis	pycom111g02520 pycom16g07960 pycom17g03080
rosa_chinensis	RchiOBHm_Chr2g0172211 RchiOBHm_Chr4g0443771
rosa_laevigata	RLG00000005891 RLG00000022093
rosa_multiflora	Rmu_co8491651.1_g000001 Rmu_ssc0000252.1_g000052
rosa_roxburghii	Rroxscaffold_2G00080080 Rroxscaffold_5G00384340
rosa_rugosa	Rorug02G0557300 Rorug02G0557400 Rorug04G0347100
rosa_samantha	Rh2AG632700 Rh2BG646300 Rh2CG612900 Rh2DG653800 Rh2DG660900 Rh4AG407400 Rh4BG418300 Rh4CG432400 Rh4DG413600
rosa_wichuraiana	Rw2G052380 Rw4G034990

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	1 cut(s)	1169
AciI	CCGC	1 cut(s)	740
AclI	AACGTT	1 cut(s)	514
AclWI	GGATC	4 cut(s)	812, 825, 1101, 1506
AcoI	YGGCCR	3 cut(s)	250, 400, 2019
AcsI	RAATTY	2 cut(s)	23, 1048
AcuI	CTGAAG	6 cut(s)	345, 615, 968, 1362, 1623, 1629
AfaI	GTAC	5 cut(s)	92, 108, 189, 698, 901
AfiI	CCNNNNNNNGG	4 cut(s)	184, 1090, 1112, 1788
AhdI	GACNNNNNGTC	1 cut(s)	640
AhlI	ACTAGT	1 cut(s)	1328
AjiI	CACGTC	1 cut(s)	1403
AjnI	CCWGG	3 cut(s)	165, 742, 1043
AloI	GAACNNNNNNTCC	2 cut(s)	1375, 1407
Alw21I	GWGCWC	2 cut(s)	100, 232
Alw26I	GTCTC	2 cut(s)	756, 1367
AlwI	GGATC	4 cut(s)	812, 825, 1101, 1506
AlwNI	CAGNNNCTG	1 cut(s)	1044
AoxI	GGCC	5 cut(s)	250, 400, 745, 913, 2019
ApeKI	GCWGC	9 cut(s)	604, 800, 1015, 1079, 1199, 1618, 1736, 1768, 1771
ApoI	RAATTY	2 cut(s)	23, 1048
AspLEI	GCGC	1 cut(s)	1632
AspS9I	GGNCC	3 cut(s)	291, 367, 1541
AsuC2I	CCSGG	1 cut(s)	1451
AsuHPI	GGTGA	4 cut(s)	80, 1382, 1496, 1936
AvaII	GGWCC	3 cut(s)	291, 367, 1541
AxyI	CCTNAGG	1 cut(s)	1662
BalI	TGGCCA	3 cut(s)	252, 402, 2021
BamHI	GGATCC	1 cut(s)	817
BbsI	GAAGAC	1 cut(s)	317
Bbv12I	GWGCWC	2 cut(s)	100, 232
BbvCI	CCTCAGC	1 cut(s)	1590
BbvI	GCAGC	9 cut(s)	616, 787, 1027, 1066, 1186, 1630, 1723, 1755, 1758
BccI	CCATC	7 cut(s)	164, 580, 905, 911, 1211, 1726, 1759
BceAI	ACGGC	1 cut(s)	1261
BcgI	CGANNNNNNTGC	2 cut(s)	219, 253
BciT130I	CCWGG	3 cut(s)	167, 744, 1045
BciVI	GTATCC	1 cut(s)	185
BclI	TGATCA	2 cut(s)	204, 1809
BcnI	CCSGG	1 cut(s)	1451
BcoDI	GTCTC	2 cut(s)	756, 1367
BcuI	ACTAGT	1 cut(s)	1328
BfaI	CTAG	3 cut(s)	84, 1329, 1700
BfmI	CTRYAG	2 cut(s)	1534, 1897
BfoI	RGCGCY	1 cut(s)	1633
BfuI	GTATCC	1 cut(s)	185
BisI	GCNGC	9 cut(s)	605, 801, 1016, 1080, 1200, 1619, 1737, 1769, 1772
BlsI	GCNGC	9 cut(s)	606, 802, 1017, 1081, 1201, 1620, 1738, 1770, 1773
Bme1390I	CCNGG	4 cut(s)	167, 744, 1045, 1451
Bme18I	GGWCC	3 cut(s)	291, 367, 1541
BmeRI	GACNNNNNGTC	1 cut(s)	640
BmgBI	CACGTC	1 cut(s)	1403
BmgT120I	GGNCC	3 cut(s)	291, 367, 1541
BmiI	GGNNCC	3 cut(s)	292, 591, 819
BmrFI	CCNGG	4 cut(s)	167, 744, 1045, 1451
BmrI	ACTGGG	1 cut(s)	1987
BmsI	GCATC	4 cut(s)	25, 1211, 1306, 1558
BmuI	ACTGGG	1 cut(s)	1987
BoxI	GACNNNNGTC	1 cut(s)	1656
BpiI	GAAGAC	1 cut(s)	317
BpmI	CTGGAG	1 cut(s)	522
Bpu10I	CCTNAGC	2 cut(s)	1416, 1590
BpuMI	CCSGG	1 cut(s)	1451
Bsa29I	ATCGAT	1 cut(s)	441
BsaJI	CCNNGG	3 cut(s)	673, 1030, 2016
BsaXI	ACNNNNNCTCC	4 cut(s)	1599, 1629, 1895, 1925
Bsc4I	CCNNNNNNNGG	4 cut(s)	184, 1090, 1112, 1788
Bse1I	ACTGG	5 cut(s)	505, 881, 1189, 1866, 1993
Bse21I	CCTNAGG	1 cut(s)	1662
BseBI	CCWGG	3 cut(s)	167, 744, 1045
BseCI	ATCGAT	1 cut(s)	441
BseDI	CCNNGG	3 cut(s)	673, 1030, 2016
BseGI	GGATG	9 cut(s)	40, 175, 211, 591, 903, 1222, 1321, 1410, 1718
BseLI	CCNNNNNNNGG	4 cut(s)	184, 1090, 1112, 1788
BseMII	CTCAG	5 cut(s)	595, 1152, 1407, 1581, 1669
BseNI	ACTGG	5 cut(s)	505, 881, 1189, 1866, 1993
BseRI	GAGGAG	1 cut(s)	1325
BseXI	GCAGC	9 cut(s)	616, 787, 1027, 1066, 1186, 1630, 1723, 1755, 1758
BseYI	CCCAGC	2 cut(s)	284, 425
BsgI	GTGCAG	3 cut(s)	474, 995, 1637
BshFI	GGCC	5 cut(s)	252, 402, 747, 915, 2021
BshVI	ATCGAT	1 cut(s)	441
BsiHKAI	GWGCWC	2 cut(s)	100, 232
BsiSI	CCGG	1 cut(s)	1451
BslFI	GGGAC	1 cut(s)	816
BslI	CCNNNNNNNGG	4 cut(s)	184, 1090, 1112, 1788
BsmAI	GTCTC	2 cut(s)	756, 1367
BsmFI	GGGAC	1 cut(s)	816
BsmI	GAATGC	1 cut(s)	2017
BsnI	GGCC	5 cut(s)	252, 402, 747, 915, 2021
Bsp1286I	GDGCHC	2 cut(s)	100, 232
Bsp1407I	TGTACA	1 cut(s)	90
Bsp143I	GATC	9 cut(s)	142, 204, 438, 817, 931, 964, 1093, 1498, 1809
Bsp19I	CCATGG	1 cut(s)	673
BspACI	CCGC	1 cut(s)	740
BspANI	GGCC	5 cut(s)	252, 402, 747, 915, 2021
BspCNI	CTCAG	5 cut(s)	594, 1153, 1408, 1582, 1668
BspDI	ATCGAT	1 cut(s)	441
BspHI	TCATGA	3 cut(s)	1234, 1405, 1431
BspLI	GGNNCC	3 cut(s)	292, 591, 819
BspPI	GGATC	4 cut(s)	812, 825, 1101, 1506
BspQI	GCTCTTC	1 cut(s)	330
BsrGI	TGTACA	1 cut(s)	90
BsrI	ACTGG	5 cut(s)	505, 881, 1189, 1866, 1993
BssECI	CCNNGG	3 cut(s)	673, 1030, 2016
BssMI	GATC	9 cut(s)	142, 204, 438, 817, 931, 964, 1093, 1498, 1809
BssT1I	CCWWGG	2 cut(s)	673, 2016
Bst2UI	CCWGG	3 cut(s)	167, 744, 1045
Bst4CI	ACNGT	2 cut(s)	1174, 1744
Bst6I	CTCTTC	2 cut(s)	330, 1281
BstAPI	GCANNNNNTGC	1 cut(s)	610
BstAUI	TGTACA	1 cut(s)	90
BstC8I	GCNNGC	5 cut(s)	250, 487, 805, 1103, 1766
BstDEI	CTNAG	9 cut(s)	581, 777, 808, 1161, 1416, 1422, 1590, 1655, 1662
BstDSI	CCRYGG	1 cut(s)	673
BstENI	CCTNNNNNAGG	2 cut(s)	1088, 1786
BstF5I	GGATG	9 cut(s)	40, 175, 211, 591, 903, 1222, 1321, 1410, 1718
BstH2I	RGCGCY	1 cut(s)	1633
BstHHI	GCGC	1 cut(s)	1632
BstKTI	GATC	9 cut(s)	145, 207, 441, 820, 934, 967, 1096, 1501, 1812
BstMAI	GTCTC	2 cut(s)	756, 1367
BstMBI	GATC	9 cut(s)	142, 204, 438, 817, 931, 964, 1093, 1498, 1809
BstMWI	GCNNNNNNNGC	4 cut(s)	610, 853, 959, 1627
BstNI	CCWGG	3 cut(s)	167, 744, 1045
BstNSI	RCATGY	5 cut(s)	489, 493, 683, 875, 1768
BstPAI	GACNNNNGTC	1 cut(s)	1656
BstSCI	CCNGG	4 cut(s)	165, 742, 1043, 1449
BstSFI	CTRYAG	2 cut(s)	1534, 1897
BstV1I	GCAGC	9 cut(s)	616, 787, 1027, 1066, 1186, 1630, 1723, 1755, 1758
BstV2I	GAAGAC	1 cut(s)	317
BstX2I	RGATCY	1 cut(s)	817
BstYI	RGATCY	1 cut(s)	817
Bsu15I	ATCGAT	1 cut(s)	441
Bsu36I	CCTNAGG	1 cut(s)	1662
BsuI	GTATCC	1 cut(s)	185
BsuRI	GGCC	5 cut(s)	252, 402, 747, 915, 2021
BsuTUI	ATCGAT	1 cut(s)	441
BtgI	CCRYGG	1 cut(s)	673
BtrI	CACGTC	1 cut(s)	1403
BtsCI	GGATG	9 cut(s)	40, 175, 211, 591, 903, 1222, 1321, 1410, 1718
BtsIMutI	CAGTG	3 cut(s)	1045, 1740, 1873
Cac8I	GCNNGC	5 cut(s)	250, 487, 805, 1103, 1766
CaiI	CAGNNNCTG	1 cut(s)	1044
CciI	TCATGA	3 cut(s)	1234, 1405, 1431
CfoI	GCGC	1 cut(s)	1632
Cfr13I	GGNCC	3 cut(s)	291, 367, 1541
ClaI	ATCGAT	1 cut(s)	441
Csp6I	GTAC	5 cut(s)	91, 107, 188, 697, 900
CspCI	CAANNNNNGTGG	2 cut(s)	242, 277
CviQI	GTAC	5 cut(s)	91, 107, 188, 697, 900
DdeI	CTNAG	9 cut(s)	581, 777, 808, 1161, 1416, 1422, 1590, 1655, 1662
DpnI	GATC	9 cut(s)	144, 206, 440, 819, 933, 966, 1095, 1500, 1811
DpnII	GATC	9 cut(s)	142, 204, 438, 817, 931, 964, 1093, 1498, 1809
DraI	TTTAAA	1 cut(s)	1068
DriI	GACNNNNNGTC	1 cut(s)	640
EaeI	YGGCCR	3 cut(s)	250, 400, 2019
Eam1104I	CTCTTC	2 cut(s)	330, 1281
Eam1105I	GACNNNNNGTC	1 cut(s)	640
EarI	CTCTTC	2 cut(s)	330, 1281
Eco130I	CCWWGG	2 cut(s)	673, 2016
Eco147I	AGGCCT	1 cut(s)	747
Eco47I	GGWCC	3 cut(s)	291, 367, 1541
Eco57I	CTGAAG	6 cut(s)	345, 615, 968, 1362, 1623, 1629
Eco81I	CCTNAGG	1 cut(s)	1662
EcoNI	CCTNNNNNAGG	2 cut(s)	1088, 1786
EcoO109I	RGGNCCY	2 cut(s)	291, 367
EcoRII	CCWGG	3 cut(s)	165, 742, 1043
EcoT14I	CCWWGG	2 cut(s)	673, 2016
EcoT22I	ATGCAT	2 cut(s)	491, 1766
ErhI	CCWWGG	2 cut(s)	673, 2016
FalI	AAGNNNNNCTT	6 cut(s)	951, 983, 1378, 1410, 1616, 1648
FaqI	GGGAC	1 cut(s)	816
FbaI	TGATCA	2 cut(s)	204, 1809
FblI	GTMKAC	1 cut(s)	1169
Fnu4HI	GCNGC	9 cut(s)	605, 801, 1016, 1080, 1200, 1619, 1737, 1769, 1772
FokI	GGATG	9 cut(s)	47, 182, 198, 598, 890, 1229, 1328, 1397, 1705
Fsp4HI	GCNGC	9 cut(s)	605, 801, 1016, 1080, 1200, 1619, 1737, 1769, 1772
FspBI	CTAG	3 cut(s)	84, 1329, 1700
GlaI	GCGC	1 cut(s)	1631
GluI	GCNGC	9 cut(s)	605, 801, 1016, 1080, 1200, 1619, 1737, 1769, 1772
GsaI	CCCAGC	2 cut(s)	288, 429
GsuI	CTGGAG	1 cut(s)	522
HaeII	RGCGCY	1 cut(s)	1633
HaeIII	GGCC	5 cut(s)	252, 402, 747, 915, 2021
HapII	CCGG	1 cut(s)	1451
HhaI	GCGC	1 cut(s)	1632
Hin6I	GCGC	1 cut(s)	1630
HinP1I	GCGC	1 cut(s)	1630
HincII	GTYRAC	1 cut(s)	1170
HindII	GTYRAC	1 cut(s)	1170
HindIII	AAGCTT	1 cut(s)	845
HinfI	GANTC	4 cut(s)	443, 943, 1035, 1951
HpaII	CCGG	1 cut(s)	1451
HphI	GGTGA	4 cut(s)	80, 1382, 1496, 1936
Hpy166II	GTNNAC	4 cut(s)	91, 243, 1170, 1715
Hpy188I	TCNGA	6 cut(s)	16, 179, 841, 948, 1031, 1603
Hpy8I	GTNNAC	4 cut(s)	91, 243, 1170, 1715
Hpy99I	CGWCG	2 cut(s)	183, 1174
HpyAV	CCTTC	9 cut(s)	65, 308, 320, 415, 808, 943, 1106, 1481, 1598
HpyCH4III	ACNGT	2 cut(s)	1174, 1744
HpyCH4IV	ACGT	3 cut(s)	514, 829, 1402
HpyF10VI	GCNNNNNNNGC	4 cut(s)	610, 853, 959, 1627
HpyF3I	CTNAG	9 cut(s)	581, 777, 808, 1161, 1416, 1422, 1590, 1655, 1662
HpySE526I	ACGT	3 cut(s)	514, 829, 1402
HspAI	GCGC	1 cut(s)	1630
Ksp22I	TGATCA	2 cut(s)	204, 1809
Kzo9I	GATC	9 cut(s)	142, 204, 438, 817, 931, 964, 1093, 1498, 1809
LguI	GCTCTTC	1 cut(s)	330
LmnI	GCTCC	4 cut(s)	4, 595, 1123, 1607
Lsp1109I	GCAGC	9 cut(s)	616, 787, 1027, 1066, 1186, 1630, 1723, 1755, 1758
LweI	GCATC	4 cut(s)	25, 1211, 1306, 1558
MaeI	CTAG	3 cut(s)	84, 1329, 1700
MaeII	ACGT	3 cut(s)	514, 829, 1402
MaeIII	GTNAC	4 cut(s)	1130, 1639, 1729, 1868
MalI	GATC	9 cut(s)	144, 206, 440, 819, 933, 966, 1095, 1500, 1811
MboI	GATC	9 cut(s)	142, 204, 438, 817, 931, 964, 1093, 1498, 1809
MfeI	CAATTG	2 cut(s)	608, 2006
MflI	RGATCY	1 cut(s)	817
MhlI	GDGCHC	2 cut(s)	100, 232
MlsI	TGGCCA	3 cut(s)	252, 402, 2021
MluCI	AATT	7 cut(s)	23, 608, 1048, 1150, 1805, 1964, 2006
MluNI	TGGCCA	3 cut(s)	252, 402, 2021
MmeI	TCCRAC	3 cut(s)	202, 514, 1181
Mox20I	TGGCCA	3 cut(s)	252, 402, 2021
Mph1103I	ATGCAT	2 cut(s)	491, 1766
MscI	TGGCCA	3 cut(s)	252, 402, 2021
MseI	TTAA	4 cut(s)	114, 1067, 1149, 1269
MslI	CAYNNNNRTG	5 cut(s)	396, 414, 618, 678, 1759
Msp20I	TGGCCA	3 cut(s)	252, 402, 2021
MspA1I	CMGCKG	2 cut(s)	248, 1736
MspI	CCGG	1 cut(s)	1451
MspR9I	CCNGG	4 cut(s)	167, 744, 1045, 1451
MunI	CAATTG	2 cut(s)	608, 2006
Mva1269I	GAATGC	1 cut(s)	2017
MvaI	CCWGG	3 cut(s)	167, 744, 1045
MwoI	GCNNNNNNNGC	4 cut(s)	610, 853, 959, 1627
NciI	CCSGG	1 cut(s)	1451
NcoI	CCATGG	1 cut(s)	673
NdeII	GATC	9 cut(s)	142, 204, 438, 817, 931, 964, 1093, 1498, 1809
NlaIV	GGNNCC	3 cut(s)	292, 591, 819
NmuCI	GTSAC	3 cut(s)	1130, 1639, 1868
NsiI	ATGCAT	2 cut(s)	491, 1766
NspI	RCATGY	5 cut(s)	489, 493, 683, 875, 1768
PaeI	GCATGC	2 cut(s)	489, 1768
PagI	TCATGA	3 cut(s)	1234, 1405, 1431
PceI	AGGCCT	1 cut(s)	747
PciSI	GCTCTTC	1 cut(s)	330
PctI	GAATGC	1 cut(s)	2017
PfeI	GAWTC	4 cut(s)	443, 943, 1035, 1951
PfoI	TCCNGGA	1 cut(s)	1449
PkrI	GCNGC	9 cut(s)	606, 802, 1017, 1081, 1201, 1620, 1738, 1770, 1773
PpuMI	RGGWCCY	2 cut(s)	291, 367
PshAI	GACNNNNGTC	1 cut(s)	1656
Psp1406I	AACGTT	1 cut(s)	514
Psp5II	RGGWCCY	2 cut(s)	291, 367
Psp6I	CCWGG	3 cut(s)	165, 742, 1043
PspFI	CCCAGC	2 cut(s)	284, 425
PspGI	CCWGG	3 cut(s)	165, 742, 1043
PspN4I	GGNNCC	3 cut(s)	292, 591, 819
PspPI	GGNCC	3 cut(s)	291, 367, 1541
PspPPI	RGGWCCY	2 cut(s)	291, 367
PstNI	CAGNNNCTG	1 cut(s)	1044
PsuI	RGATCY	1 cut(s)	817
PvuII	CAGCTG	2 cut(s)	248, 1736
RsaI	GTAC	5 cut(s)	92, 108, 189, 698, 901
RsaNI	GTAC	5 cut(s)	91, 107, 188, 697, 900
RseI	CAYNNNNRTG	5 cut(s)	396, 414, 618, 678, 1759
SalI	GTCGAC	1 cut(s)	1168
SapI	GCTCTTC	1 cut(s)	330
SaqAI	TTAA	4 cut(s)	114, 1067, 1149, 1269
SatI	GCNGC	9 cut(s)	605, 801, 1016, 1080, 1200, 1619, 1737, 1769, 1772
Sau3AI	GATC	9 cut(s)	142, 204, 438, 817, 931, 964, 1093, 1498, 1809
Sau96I	GGNCC	3 cut(s)	291, 367, 1541
ScrFI	CCNGG	4 cut(s)	167, 744, 1045, 1451
SduI	GDGCHC	2 cut(s)	100, 232
SfaNI	GCATC	4 cut(s)	25, 1211, 1306, 1558
SfcI	CTRYAG	2 cut(s)	1534, 1897
SinI	GGWCC	3 cut(s)	291, 367, 1541
SmiMI	CAYNNNNRTG	5 cut(s)	396, 414, 618, 678, 1759
SpeI	ACTAGT	1 cut(s)	1328
SphI	GCATGC	2 cut(s)	489, 1768
Sse9I	AATT	7 cut(s)	23, 608, 1048, 1150, 1805, 1964, 2006
SseBI	AGGCCT	1 cut(s)	747
SsiI	CCGC	1 cut(s)	740
SspMI	CTAG	3 cut(s)	84, 1329, 1700
StuI	AGGCCT	1 cut(s)	747
StyD4I	CCNGG	4 cut(s)	165, 742, 1043, 1449
StyI	CCWWGG	2 cut(s)	673, 2016
TaaI	ACNGT	2 cut(s)	1174, 1744
TaiI	ACGT	3 cut(s)	517, 832, 1405
TaqI	TCGA	3 cut(s)	441, 663, 1169
TasI	AATT	7 cut(s)	23, 608, 1048, 1150, 1805, 1964, 2006
TatI	WGTACW	1 cut(s)	90
TfiI	GAWTC	4 cut(s)	443, 943, 1035, 1951
Tru1I	TTAA	4 cut(s)	114, 1067, 1149, 1269
Tru9I	TTAA	4 cut(s)	114, 1067, 1149, 1269
TscAI	CASTG	3 cut(s)	1045, 1747, 1873
TseFI	GTSAC	3 cut(s)	1130, 1639, 1868
TseI	GCWGC	9 cut(s)	604, 800, 1015, 1079, 1199, 1618, 1736, 1768, 1771
Tsp45I	GTSAC	3 cut(s)	1130, 1639, 1868
TspGWI	ACGGA	1 cut(s)	1543
TspRI	CASTG	3 cut(s)	1045, 1747, 1873
VpaK11BI	GGWCC	3 cut(s)	291, 367, 1541
XagI	CCTNNNNNAGG	2 cut(s)	1088, 1786
XapI	RAATTY	2 cut(s)	23, 1048
XceI	RCATGY	5 cut(s)	489, 493, 683, 875, 1768
XmiI	GTMKAC	1 cut(s)	1169
XspI	CTAG	3 cut(s)	84, 1329, 1700
Zsp2I	ATGCAT	2 cut(s)	491, 1766

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.