Rh4BG418300

Serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4B
Physical Location & Seq
Reverse (-)
56512102 .. 56517647
5546 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4BG418300.1

Sequence Viewer

Length: 1833 bp
ATGGCAATGGAATTTTTATTAAACAAGAAGAACTTTCCGTTGAATCACAAAGACTACACGTTGTACGAAGAAGTTGGTCAGGGTGTGAGTGCCACTGTGTACAGAGCTCTCTGCATCCCACTTGATGAAATTGTTGCCATCAAAGTTATAGACCTCGAGAAATGCAACAATGATATGGATATGATTCGACGAGAAGTACAGACTATGATCTTGCTGGATCATCCTAATCTGCTGAAAGCACACTGCTCTTTCACTGCTACCAGGAGTCTGTGGATTGTCATGCCTTACATGGCCGCCGGTTCCTGTCTTCACATCATTAAGTCTGATCATCCCAATGGTTTTGAAGAGCATACCATCGTGACATTGTTGTATGGGGTCATCAAAGCTCTTGCTTATCTACATTCCCATGGCTACATTCACAGAGATGTTAAGGCTGGAAATATACTGATTAATTCAAAAGGTGCAGTTAAGTTAGCAGACTTTGGTGTTTCAACGAGCTTGTTTGATTCTGGCAATAGGCTGCGGTCAAAAAACACCTTTGTCGGAACTCCATGCTGGATGGCTCCAGAAGTTATGCAGCAATTGCATGGATACGACTTCAAAGCAGACATCTGGTCATTTGGGATAACAGCACTAGAACTTGCTCATGGTCATGCTCCATTCTCCAAGTATCCACCAATGAAGGTTTTGCTGATGACCTTACAAAATGCGCCTCCTGGCCTTGACTATGAAAGGGACAAGCGATTTTCAAAGTCCTTTAAAGAGATAGTAGCTGCTTGCTTAGTAAAGGATCCAAAGAAGCGTCCTACTGCAGAGAAGCTTTTGAAGCACCGTTTCTTCAAGCATGCACGTTCAAAGGAATTTATAGTTCGGACAATTCTTGATGGCCTTTGTCCCCTTGGTGATCGATTTAGAATGTTGAAGCAAAAAGAGGCTGAATTCTTTGCACAAAATGAGGCTATGTATGGTGAAGAGCATTTATCACAGCAAAAGTATATACGGGGGATCAGTGCATGGAATTTTGATCTAGAGGAATTAAAAAGACAGGCTGCTCTTATTCAGGATGATGATGGCATCACATTTGCAGAAAATCAAGAGTGGATCTGCAAACAGAAGGGTGAAATTGATGTCTCAGTTGATCTATTAAATAGATCAACATGGAAAGATGCGGACTTCAAAAAATTTGAAGAACCTGTTGACTCATCAAAATTGAGGCAAGGAGAAAAGAGTAGCTATTTTGGAGTTGATAATTTGGAGAGAAGTTGCTCAATGCCAAGAAATATCTATTCTGAAGCTCCAAAGTTACGCAGTTTGGGTCCATTCAAAATTAACTATTCCACTATTTTCAGTGGTGATAAGCGCAGTGATCAGTTGACACATCATCAGAAGAGAGATAGTTGTTTACATGAGACAACATTAGATGAACTCGGGGTCCAATGTAAGGGGCAATCCAAAGTCAGAGTGCCAGATTTGAGTCAAAAGGACACGCCAAATGGCTTTACTAGACCATATATTGGGGAATCAGTAGATTCTGTAAACGGTCCAGCAGCTTGTGTCGTTCCTGCGCTCCATTGCATTCTGCAACAAAATGCCATGCAAATGGAAGAAACAATGAGATTGATTGAAGTTGTTGATCAAATCACAGGCAATCACGCAGAGCTTGCAGAGGCAGTAACAAGTAAAAAGCAGATGCAGTTGTCTTTAGCTTCTGCAAGGGAGAGAGTCCTAGAAGCTCATGTGATTTCTATTGAAAATAGGATTGAGAAACTAGTTGTCGAGTTGCAGATACAAAAGATGAAAAATACCAAGGTCTGTATCTATTACTGTTTTTGA

Protein Analysis

610

Amino Acids

69.42

Weight (kDa)

7.84

Isoelectric Point (pI)

39.82

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 19 - 280 2.2e-62 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 20 - 276 1.3e-47 Protein tyrosine and serine/threonine kinase
Kinase-like PF14531 118 - 223 1.1e-06 Kinase-like
Pkinase_fungal PF17667 119 - 203 1.3e-06 Fungal protein kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 1514
AciI CCGC 3 cut(s) 294, 523, 1169
AclWI GGATC 5 cut(s) 225, 785, 798, 1013, 1109
AcoI YGGCCR 1 cut(s) 291
AcsI RAATTY 5 cut(s) 11, 860, 938, 1018, 1181
AcuI CTGAAG 1 cut(s) 1311
AfaI GTAC 3 cut(s) 65, 101, 198
AfiI CCNNNNNNNGG 2 cut(s) 1441, 1514
AflIII ACRYGT 1 cut(s) 57
AhdI GACNNNNNGTC 1 cut(s) 613
AhlI ACTAGT 1 cut(s) 1768
AjnI CCWGG 2 cut(s) 260, 715
AloI GAACNNNNNNTCC 2 cut(s) 1416, 1448
Alw21I GWGCWC 1 cut(s) 109
Alw26I GTCTC 2 cut(s) 1135, 1403
AlwI GGATC 5 cut(s) 225, 785, 798, 1013, 1109
Ama87I CYCGRG 2 cut(s) 155, 1427
AoxI GGCC 3 cut(s) 291, 718, 886
ApeKI GCWGC 5 cut(s) 520, 577, 773, 1049, 1547
ApoI RAATTY 5 cut(s) 11, 860, 938, 1018, 1181
AseI ATTAAT 1 cut(s) 450
AspLEI GCGC 3 cut(s) 712, 1362, 1567
AspS9I GGNCC 3 cut(s) 1316, 1432, 1541
AsuHPI GGTGA 4 cut(s) 914, 980, 1130, 1364
AvaI CYCGRG 2 cut(s) 155, 1427
AvaII GGWCC 3 cut(s) 1316, 1432, 1541
BamHI GGATCC 1 cut(s) 790
BanII GRGCYC 1 cut(s) 109
BbsI GAAGAC 1 cut(s) 299
Bbv12I GWGCWC 1 cut(s) 109
BbvI GCAGC 5 cut(s) 507, 589, 760, 1036, 1559
BccI CCATC 5 cut(s) 146, 362, 553, 878, 1064
BciT130I CCWGG 2 cut(s) 262, 717
BciVI GTATCC 2 cut(s) 584, 681
BclI TGATCA 3 cut(s) 325, 1366, 1633
BcoDI GTCTC 2 cut(s) 1135, 1403
BcuI ACTAGT 1 cut(s) 1768
BfaI CTAG 5 cut(s) 635, 1028, 1503, 1727, 1769
BfmI CTRYAG 1 cut(s) 810
BfuI GTATCC 2 cut(s) 584, 681
BisI GCNGC 6 cut(s) 294, 521, 578, 774, 1050, 1548
BlsI GCNGC 6 cut(s) 295, 522, 579, 775, 1051, 1549
Bme1390I CCNGG 2 cut(s) 262, 717
Bme18I GGWCC 3 cut(s) 1316, 1432, 1541
BmeRI GACNNNNNGTC 1 cut(s) 613
BmeT110I CYCGRG 2 cut(s) 155, 1427
BmgT120I GGNCC 3 cut(s) 1316, 1432, 1541
BmiI GGNNCC 5 cut(s) 301, 564, 792, 1317, 1433
BmrFI CCNGG 2 cut(s) 262, 717
BmsI GCATC 4 cut(s) 123, 1083, 1156, 1680
BpiI GAAGAC 1 cut(s) 299
BpmI CTGGAG 1 cut(s) 549
Bsa29I ATCGAT 1 cut(s) 907
BsaJI CCNNGG 3 cut(s) 406, 898, 1806
Bsc4I CCNNNNNNNGG 2 cut(s) 1441, 1514
Bse118I RCCGGY 1 cut(s) 296
Bse3DI GCAATG 2 cut(s) 12, 1570
BseBI CCWGG 2 cut(s) 262, 717
BseCI ATCGAT 1 cut(s) 907
BseDI CCNNGG 3 cut(s) 406, 898, 1806
BseGI GGATG 5 cut(s) 114, 220, 328, 564, 1069
BseLI CCNNNNNNNGG 2 cut(s) 1441, 1514
BseMI GCAATG 2 cut(s) 12, 1570
BseMII CTCAG 1 cut(s) 1146
BseXI GCAGC 5 cut(s) 507, 589, 760, 1036, 1559
BsgI GTGCAG 1 cut(s) 483
BshFI GGCC 3 cut(s) 293, 720, 888
BshVI ATCGAT 1 cut(s) 907
BsiHKAI GWGCWC 1 cut(s) 109
BsiHKCI CYCGRG 2 cut(s) 155, 1427
BsiSI CCGG 1 cut(s) 297
BslFI GGGAC 2 cut(s) 749, 879
BslI CCNNNNNNNGG 2 cut(s) 1441, 1514
BsmAI GTCTC 2 cut(s) 1135, 1403
BsmFI GGGAC 2 cut(s) 749, 879
BsmI GAATGC 1 cut(s) 1575
BsnI GGCC 3 cut(s) 293, 720, 888
BsoBI CYCGRG 2 cut(s) 155, 1427
Bsp1286I GDGCHC 1 cut(s) 109
Bsp1407I TGTACA 1 cut(s) 99
Bsp19I CCATGG 1 cut(s) 406
BspACI CCGC 3 cut(s) 294, 523, 1169
BspANI GGCC 3 cut(s) 293, 720, 888
BspCNI CTCAG 1 cut(s) 1145
BspDI ATCGAT 1 cut(s) 907
BspLI GGNNCC 5 cut(s) 301, 564, 792, 1317, 1433
BspMAI CTGCAG 1 cut(s) 814
BspPI GGATC 5 cut(s) 225, 785, 798, 1013, 1109
BspQI GCTCTTC 2 cut(s) 339, 966
BsrDI GCAATG 2 cut(s) 12, 1570
BsrFI RCCGGY 1 cut(s) 296
BsrGI TGTACA 1 cut(s) 99
BssAI RCCGGY 1 cut(s) 296
BssECI CCNNGG 3 cut(s) 406, 898, 1806
BssT1I CCWWGG 3 cut(s) 406, 898, 1806
Bst2UI CCWGG 2 cut(s) 262, 717
Bst4CI ACNGT 4 cut(s) 97, 833, 1541, 1826
Bst6I CTCTTC 3 cut(s) 339, 966, 1382
BstAPI GCANNNNNTGC 2 cut(s) 583, 1661
BstAUI TGTACA 1 cut(s) 99
BstC8I GCNNGC 3 cut(s) 778, 846, 1662
BstDEI CTNAG 2 cut(s) 781, 1132
BstDSI CCRYGG 1 cut(s) 406
BstF5I GGATG 5 cut(s) 114, 220, 328, 564, 1069
BstHHI GCGC 3 cut(s) 712, 1362, 1567
BstMAI GTCTC 2 cut(s) 1135, 1403
BstMWI GCNNNNNNNGC 3 cut(s) 583, 826, 1661
BstNI CCWGG 2 cut(s) 262, 717
BstNSI RCATGY 1 cut(s) 848
BstSCI CCNGG 2 cut(s) 260, 715
BstSFI CTRYAG 1 cut(s) 810
BstV1I GCAGC 5 cut(s) 507, 589, 760, 1036, 1559
BstV2I GAAGAC 1 cut(s) 299
BstX2I RGATCY 2 cut(s) 790, 1101
BstXI CCANNNNNNTGG 1 cut(s) 1600
BstYI RGATCY 2 cut(s) 790, 1101
Bsu15I ATCGAT 1 cut(s) 907
BsuI GTATCC 2 cut(s) 584, 681
BsuRI GGCC 3 cut(s) 293, 720, 888
BsuTUI ATCGAT 1 cut(s) 907
BtgI CCRYGG 1 cut(s) 406
BtsCI GGATG 5 cut(s) 114, 220, 328, 564, 1069
BtsI GCAGTG 3 cut(s) 241, 252, 1369
BtsIMutI CAGTG 6 cut(s) 93, 241, 252, 1015, 1354, 1369
Cac8I GCNNGC 3 cut(s) 778, 846, 1662
CfoI GCGC 3 cut(s) 712, 1362, 1567
Cfr10I RCCGGY 1 cut(s) 296
Cfr13I GGNCC 3 cut(s) 1316, 1432, 1541
ClaI ATCGAT 1 cut(s) 907
CseI GACGC 1 cut(s) 791
Csp6I GTAC 3 cut(s) 64, 100, 197
CviQI GTAC 3 cut(s) 64, 100, 197
DdeI CTNAG 2 cut(s) 781, 1132
DraI TTTAAA 1 cut(s) 760
DriI GACNNNNNGTC 1 cut(s) 613
EaeI YGGCCR 1 cut(s) 291
Eam1104I CTCTTC 3 cut(s) 339, 966, 1382
Eam1105I GACNNNNNGTC 1 cut(s) 613
EarI CTCTTC 3 cut(s) 339, 966, 1382
Ecl136II GAGCTC 1 cut(s) 107
Eco130I CCWWGG 3 cut(s) 406, 898, 1806
Eco24I GRGCYC 1 cut(s) 109
Eco47I GGWCC 3 cut(s) 1316, 1432, 1541
Eco53kI GAGCTC 1 cut(s) 107
Eco57I CTGAAG 1 cut(s) 1311
Eco88I CYCGRG 2 cut(s) 155, 1427
EcoICRI GAGCTC 1 cut(s) 107
EcoRI GAATTC 1 cut(s) 938
EcoRII CCWGG 2 cut(s) 260, 715
EcoT14I CCWWGG 3 cut(s) 406, 898, 1806
EcoT38I GRGCYC 1 cut(s) 109
ErhI CCWWGG 3 cut(s) 406, 898, 1806
FalI AAGNNNNNCTT 2 cut(s) 17, 49
FaqI GGGAC 2 cut(s) 749, 879
FbaI TGATCA 3 cut(s) 325, 1366, 1633
Fnu4HI GCNGC 6 cut(s) 294, 521, 578, 774, 1050, 1548
FokI GGATG 5 cut(s) 101, 207, 315, 571, 1076
FriOI GRGCYC 1 cut(s) 109
Fsp4HI GCNGC 6 cut(s) 294, 521, 578, 774, 1050, 1548
FspBI CTAG 5 cut(s) 635, 1028, 1503, 1727, 1769
GlaI GCGC 3 cut(s) 711, 1361, 1566
GluI GCNGC 6 cut(s) 294, 521, 578, 774, 1050, 1548
GsuI CTGGAG 1 cut(s) 549
HaeIII GGCC 3 cut(s) 293, 720, 888
HapII CCGG 1 cut(s) 297
HgaI GACGC 1 cut(s) 791
HhaI GCGC 3 cut(s) 712, 1362, 1567
Hin6I GCGC 3 cut(s) 710, 1360, 1565
HinP1I GCGC 3 cut(s) 710, 1360, 1565
HincII GTYRAC 2 cut(s) 1198, 1374
HindII GTYRAC 2 cut(s) 1198, 1374
HindIII AAGCTT 1 cut(s) 818
HinfI GANTC 9 cut(s) 43, 184, 265, 506, 1199, 1474, 1520, 1529, 1722
HpaII CCGG 1 cut(s) 297
HphI GGTGA 4 cut(s) 914, 980, 1130, 1364
Hpy166II GTNNAC 5 cut(s) 100, 1198, 1374, 1403, 1537
Hpy188I TCNGA 6 cut(s) 325, 545, 873, 1291, 1386, 1460
Hpy188III TCNNGA 7 cut(s) 157, 358, 566, 881, 1028, 1061, 1094
Hpy8I GTNNAC 5 cut(s) 100, 1198, 1374, 1403, 1537
Hpy99I CGWCG 1 cut(s) 192
HpyAV CCTTC 2 cut(s) 676, 1108
HpyCH4III ACNGT 4 cut(s) 97, 833, 1541, 1826
HpyCH4IV ACGT 2 cut(s) 59, 850
HpyF10VI GCNNNNNNNGC 3 cut(s) 583, 826, 1661
HpyF3I CTNAG 2 cut(s) 781, 1132
HpySE526I ACGT 2 cut(s) 59, 850
HspAI GCGC 3 cut(s) 710, 1360, 1565
Ksp22I TGATCA 3 cut(s) 325, 1366, 1633
LguI GCTCTTC 2 cut(s) 339, 966
LmnI GCTCC 4 cut(s) 568, 661, 1300, 1572
Lsp1109I GCAGC 5 cut(s) 507, 589, 760, 1036, 1559
LweI GCATC 4 cut(s) 123, 1083, 1156, 1680
MaeI CTAG 5 cut(s) 635, 1028, 1503, 1727, 1769
MaeII ACGT 2 cut(s) 59, 850
MaeIII GTNAC 3 cut(s) 358, 1302, 1672
MboII GAAGA 9 cut(s) 40, 80, 299, 356, 829, 983, 1199, 1399, 1616
MfeI CAATTG 1 cut(s) 581
MflI RGATCY 2 cut(s) 790, 1101
MhlI GDGCHC 1 cut(s) 109
MlyI GAGTC 4 cut(s) 274, 1193, 1483, 1731
MmeI TCCRAC 1 cut(s) 523
MnlI CCTC 7 cut(s) 164, 723, 925, 949, 1024, 1206, 1660
MseI TTAA 9 cut(s) 20, 318, 429, 450, 468, 759, 1037, 1145, 1329
MslI CAYNNNNRTG 5 cut(s) 333, 405, 423, 651, 1598
MspI CCGG 1 cut(s) 297
MspR9I CCNGG 2 cut(s) 262, 717
MunI CAATTG 1 cut(s) 581
Mva1269I GAATGC 1 cut(s) 1575
MvaI CCWGG 2 cut(s) 262, 717
MwoI GCNNNNNNNGC 3 cut(s) 583, 826, 1661
NcoI CCATGG 1 cut(s) 406
NlaIV GGNNCC 5 cut(s) 301, 564, 792, 1317, 1433
NmuCI GTSAC 1 cut(s) 358
NspI RCATGY 1 cut(s) 848
PaeI GCATGC 1 cut(s) 848
PaeR7I CTCGAG 1 cut(s) 155
PciSI GCTCTTC 2 cut(s) 339, 966
PctI GAATGC 1 cut(s) 1575
PfeI GAWTC 5 cut(s) 43, 184, 506, 1520, 1529
PflMI CCANNNNNTGG 1 cut(s) 1514
PkrI GCNGC 6 cut(s) 295, 522, 579, 775, 1051, 1549
PleI GAGTC 4 cut(s) 273, 1193, 1482, 1730
PpsI GAGTC 4 cut(s) 273, 1193, 1482, 1730
PshBI ATTAAT 1 cut(s) 450
Psp124BI GAGCTC 1 cut(s) 109
Psp6I CCWGG 2 cut(s) 260, 715
PspGI CCWGG 2 cut(s) 260, 715
PspN4I GGNNCC 5 cut(s) 301, 564, 792, 1317, 1433
PspPI GGNCC 3 cut(s) 1316, 1432, 1541
PstI CTGCAG 1 cut(s) 814
PsuI RGATCY 2 cut(s) 790, 1101
RsaI GTAC 3 cut(s) 65, 101, 198
RsaNI GTAC 3 cut(s) 64, 100, 197
RseI CAYNNNNRTG 5 cut(s) 333, 405, 423, 651, 1598
SacI GAGCTC 1 cut(s) 109
SapI GCTCTTC 2 cut(s) 339, 966
SaqAI TTAA 9 cut(s) 20, 318, 429, 450, 468, 759, 1037, 1145, 1329
SatI GCNGC 6 cut(s) 294, 521, 578, 774, 1050, 1548
Sau96I GGNCC 3 cut(s) 1316, 1432, 1541
SchI GAGTC 4 cut(s) 274, 1193, 1483, 1731
ScrFI CCNGG 2 cut(s) 262, 717
SduI GDGCHC 1 cut(s) 109
SfaNI GCATC 4 cut(s) 123, 1083, 1156, 1680
SfcI CTRYAG 1 cut(s) 810
Sfr274I CTCGAG 1 cut(s) 155
SinI GGWCC 3 cut(s) 1316, 1432, 1541
SlaI CTCGAG 1 cut(s) 155
SmiMI CAYNNNNRTG 5 cut(s) 333, 405, 423, 651, 1598
SmlI CTYRAG 1 cut(s) 155
SmoI CTYRAG 1 cut(s) 155
SpeI ACTAGT 1 cut(s) 1768
SphI GCATGC 1 cut(s) 848
SsiI CCGC 3 cut(s) 294, 523, 1169
SspMI CTAG 5 cut(s) 635, 1028, 1503, 1727, 1769
SstI GAGCTC 1 cut(s) 109
StyD4I CCNGG 2 cut(s) 260, 715
StyI CCWWGG 3 cut(s) 406, 898, 1806
TaaI ACNGT 4 cut(s) 97, 833, 1541, 1826
TaiI ACGT 2 cut(s) 62, 853
TaqI TCGA 4 cut(s) 156, 187, 907, 1776
TatI WGTACW 2 cut(s) 99, 196
TauI GCSGC 1 cut(s) 296
TfiI GAWTC 5 cut(s) 43, 184, 506, 1520, 1529
Tru1I TTAA 9 cut(s) 20, 318, 429, 450, 468, 759, 1037, 1145, 1329
Tru9I TTAA 9 cut(s) 20, 318, 429, 450, 468, 759, 1037, 1145, 1329
TscAI CASTG 6 cut(s) 100, 248, 259, 1015, 1354, 1369
TseFI GTSAC 1 cut(s) 358
TseI GCWGC 5 cut(s) 520, 577, 773, 1049, 1547
Tsp45I GTSAC 1 cut(s) 358
TspDTI ATGAA 5 cut(s) 141, 695, 744, 1437, 1811
TspGWI ACGGA 1 cut(s) 27
TspRI CASTG 6 cut(s) 100, 248, 259, 1015, 1354, 1369
Van91I CCANNNNNTGG 1 cut(s) 1514
VpaK11BI GGWCC 3 cut(s) 1316, 1432, 1541
VspI ATTAAT 1 cut(s) 450
XapI RAATTY 5 cut(s) 11, 860, 938, 1018, 1181
XbaI TCTAGA 1 cut(s) 1027
XceI RCATGY 1 cut(s) 848
XhoI CTCGAG 1 cut(s) 155
XspI CTAG 5 cut(s) 635, 1028, 1503, 1727, 1769
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.