Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000005

Orthogroup ID

OG0001835

Physical Location & Seq

Genomic Coordinates Reverse (-)

63760423 .. 63765893

Gene Structure 5471 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_5G00384340.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1488 bp

ATGGCAATGGAATTTTTATTAAACAAGAAGAACTTTCCGTTGAATCACAAAGACTACACATTGTACGAAGAAGTTGGTCAGGGTGTGAGTGCCACTGTGTACAGAGCTCTCTGCATCCCACTTGATGAAATTGTTGCCATCAAAGCTATAGACCTCGAGAAGTGCAACAATGATATGGATATGATTCGACGAGAAGTACAGACTATGATCTTGCTGGATCATCCTAATCTGCTGAAAGCACACTGCTCTTTCACTGCTACCAGGAGTCTGTGGATTGTCATGCCTTTTATGGCCGCCGGTTCCTGTCTTCACATCATTAAGTCTGATCATCCCAATGGTTTTGAAGAGCATACCATCGTGACATTGTTGTATGGGGTTATCAAAGCTCTTGCTTATCTACATTCCCATGGCTACATTCACAGAGATGTTAAGGCTGGAAATATACTGATTAATTCAAAAGGTGCAGTTAAGTTAGCAGACTTTGGTGTTTCAACGAGCTTGTTTGATTCTGGCAATAGACTGCAGTCAAAAAACACCTTTGTCGGAACTCCATGCTGGATGGCTCCAGAAGTTATGCAGCAATTGCATGGATACGACTTCAAAGCAGACATCTGGTCATTTGGGATAACAGCACTAGAACTTGCTCATGGTCATGCTCCATTCTCCAAGTATCCACCAATGAAGGTTTTGCTGATGACCTTACAAAATGCGCCTCCTGGCCTTGACTATGAAAGGGACAAGCGATTTTCAAAGTCCTTTAAAGAGATAGTAGCTGCTTGCTTAGTAAAGGATCCAAAGAAGCGTCCTACTGCAGAGAAGCTTTTGAAGCACCGTTTCTTCAAGCATGCACGTTCAAAGGAATTTATAGTTCGGACAATTCTTGATGGCCTTTGTCCCCTTGGTGATCGATTTAGAATGTTGAAGCAAAAAGAGGCTGAATTCTTTGCACAAAATGAGGCTACGTATGGTGACGAGCATTTATCACAGCAAAAGTATATACGAGGGATCAGTGCATGGAATTTTGATCTAGAGGACTTAAAAAGACAGGCTGCTCTTGTGAAGACAGCATTAGATGAACTCGGGGTCCAATGTAAGGGGCAATCCAAGGTCAGAGTGCCAGATTTGAGTCAAAAGGACACGCCAAATGGCTTTACTAGACCATATATTGGGGAATCAGTAGATTCTGTAAACGGTCCAGCAGCTTGTGTCGTTCCTGCGCTCCATTGCATTCTGCAACAAAATGTCATGCAAATGGAAGAAACAATGAGATTGATTGAAGTTGTTGATCAAATCACAGGCAATCACGCAGAGCTCGCAGAGGCAGTAACTAGTAAAAAGCAGATGCAGGTATACACTGATTTGGGTTCTAAACCTTTGCATATAGCTAGCTGCTTAAATGGGATTGAGAAACTAGTTGTTGAGTTGCAGATACAAAAGATGAAAAATACCAAGCTGGAGAGACAACTGAGACAAGTTGACAAGGAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001932 GO:0001934 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0007154 GO:0007165 GO:0007346 GO:0008150 GO:0008152 GO:0009893 GO:0009987 GO:0010562 GO:0010604 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019220 GO:0019222 GO:0019538 GO:0023014 GO:0023052 GO:0031098 GO:0031323 GO:0031325 GO:0031399 GO:0031401 GO:0032147 GO:0032268 GO:0032270 GO:0033554 GO:0033674 GO:0035556 GO:0036211 GO:0042325 GO:0042327 GO:0043085 GO:0043170 GO:0043412 GO:0043549 GO:0044093 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0045859 GO:0045860 GO:0045937 GO:0048518 GO:0048522 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051174 GO:0051246 GO:0051247 GO:0051338 GO:0051347 GO:0051716 GO:0051726 GO:0060255 GO:0065007 GO:0065009 GO:0071704 GO:0080090 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase

Protein Analysis

495

Amino Acids

55.9

Weight (kDa)

8.47

Isoelectric Point (pI)

34.05

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	19 - 280	6.5e-62	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	20 - 276	2.3e-47	Protein tyrosine and serine/threonine kinase
Kinase-like	PF14531	118 - 223	1.5e-06	Kinase-like
Pkinase_fungal	PF17667	119 - 203	7.5e-07	Fungal protein kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001835)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G14720 AT5G14720
fragaria_vesca	FvH4_4g34360 FvH4_4g34360 FvH4_6g50820 FvH4_6g50820 FvH4_6g50820 FvH4_6g50820 FvH4_6g50820
malus_domestica	MD09G1031900.v1.1 MD09G1032000.v1.1 MD16G1093600.v1.1 MD17G1033700.v1.1
prunus_persica	Prupe.1G252900_v2.0.a1 Prupe.1G252900_v2.0.a1 Prupe.1G252900_v2.0.a1 Prupe.1G252900_v2.0.a1 Prupe.1G252900_v2.0.a1 Prupe.3G286000_v2.0.a1 Prupe.3G286000_v2.0.a1 Prupe.3G286000_v2.0.a1 Prupe.3G286000_v2.0.a1
pyrus_communis	pycom111g02520 pycom16g07960 pycom17g03080
rosa_chinensis	RchiOBHm_Chr2g0172211 RchiOBHm_Chr4g0443771
rosa_laevigata	RLG00000005891 RLG00000022093
rosa_multiflora	Rmu_co8491651.1_g000001 Rmu_ssc0000252.1_g000052
rosa_roxburghii	Rroxscaffold_2G00080080 Rroxscaffold_5G00384340
rosa_rugosa	Rorug02G0557300 Rorug02G0557400 Rorug04G0347100
rosa_samantha	Rh2AG632700 Rh2BG646300 Rh2CG612900 Rh2DG653800 Rh2DG660900 Rh4AG407400 Rh4BG418300 Rh4CG432400 Rh4DG413600
rosa_wichuraiana	Rw2G052380 Rw4G034990

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1336
AccB7I	CCANNNNNTGG	1 cut(s)	1166
AccI	GTMKAC	1 cut(s)	1350
AciI	CCGC	1 cut(s)	294
AclWI	GGATC	4 cut(s)	225, 785, 798, 1013
AcoI	YGGCCR	1 cut(s)	291
AcsI	RAATTY	4 cut(s)	11, 860, 938, 1018
AfaI	GTAC	3 cut(s)	65, 101, 198
AfiI	CCNNNNNNNGG	2 cut(s)	1093, 1166
AhdI	GACNNNNNGTC	1 cut(s)	613
AhlI	ACTAGT	2 cut(s)	1328, 1411
AjnI	CCWGG	2 cut(s)	260, 715
AloI	GAACNNNNNNTCC	2 cut(s)	1068, 1100
Alw21I	GWGCWC	2 cut(s)	109, 1314
Alw26I	GTCTC	2 cut(s)	1453, 1462
AlwI	GGATC	4 cut(s)	225, 785, 798, 1013
Ama87I	CYCGRG	2 cut(s)	155, 1079
AoxI	GGCC	3 cut(s)	291, 718, 886
ApeKI	GCWGC	5 cut(s)	577, 773, 1049, 1199, 1389
ApoI	RAATTY	4 cut(s)	11, 860, 938, 1018
AseI	ATTAAT	1 cut(s)	450
AspLEI	GCGC	2 cut(s)	712, 1219
AspS9I	GGNCC	2 cut(s)	1084, 1193
AsuHPI	GGTGA	2 cut(s)	914, 980
AsuNHI	GCTAGC	1 cut(s)	1385
AvaI	CYCGRG	2 cut(s)	155, 1079
AvaII	GGWCC	2 cut(s)	1084, 1193
BamHI	GGATCC	1 cut(s)	790
BanII	GRGCYC	2 cut(s)	109, 1314
BbsI	GAAGAC	2 cut(s)	299, 1067
Bbv12I	GWGCWC	2 cut(s)	109, 1314
BbvI	GCAGC	5 cut(s)	589, 760, 1036, 1211, 1376
BccI	CCATC	4 cut(s)	146, 362, 553, 878
BciT130I	CCWGG	2 cut(s)	262, 717
BciVI	GTATCC	2 cut(s)	584, 681
BclI	TGATCA	2 cut(s)	325, 1285
BcoDI	GTCTC	2 cut(s)	1453, 1462
BcuI	ACTAGT	2 cut(s)	1328, 1411
BfaI	CTAG	6 cut(s)	635, 1028, 1155, 1329, 1386, 1412
BfmI	CTRYAG	3 cut(s)	147, 521, 810
BfuAI	ACCTGC	1 cut(s)	1336
BfuI	GTATCC	2 cut(s)	584, 681
BisI	GCNGC	6 cut(s)	294, 578, 774, 1050, 1200, 1390
BlsI	GCNGC	6 cut(s)	295, 579, 775, 1051, 1201, 1391
Bme1390I	CCNGG	2 cut(s)	262, 717
Bme18I	GGWCC	2 cut(s)	1084, 1193
BmeRI	GACNNNNNGTC	1 cut(s)	613
BmeT110I	CYCGRG	2 cut(s)	155, 1079
BmgT120I	GGNCC	2 cut(s)	1084, 1193
BmiI	GGNNCC	4 cut(s)	301, 564, 792, 1085
BmrFI	CCNGG	2 cut(s)	262, 717
BmsI	GCATC	2 cut(s)	123, 1332
BmtI	GCTAGC	1 cut(s)	1389
BoxI	GACNNNNGTC	1 cut(s)	523
BpiI	GAAGAC	2 cut(s)	299, 1067
BpmI	CTGGAG	2 cut(s)	549, 1475
Bsa29I	ATCGAT	1 cut(s)	907
BsaAI	YACGTR	1 cut(s)	963
BsaJI	CCNNGG	3 cut(s)	406, 898, 1104
Bsc4I	CCNNNNNNNGG	2 cut(s)	1093, 1166
Bse118I	RCCGGY	1 cut(s)	296
Bse3DI	GCAATG	2 cut(s)	12, 1222
BseBI	CCWGG	2 cut(s)	262, 717
BseCI	ATCGAT	1 cut(s)	907
BseDI	CCNNGG	3 cut(s)	406, 898, 1104
BseGI	GGATG	4 cut(s)	114, 220, 328, 564
BseLI	CCNNNNNNNGG	2 cut(s)	1093, 1166
BseMI	GCAATG	2 cut(s)	12, 1222
BseMII	CTCAG	1 cut(s)	1457
BseXI	GCAGC	5 cut(s)	589, 760, 1036, 1211, 1376
BsgI	GTGCAG	1 cut(s)	483
BshFI	GGCC	3 cut(s)	293, 720, 888
BshVI	ATCGAT	1 cut(s)	907
BsiHKAI	GWGCWC	2 cut(s)	109, 1314
BsiHKCI	CYCGRG	2 cut(s)	155, 1079
BsiSI	CCGG	1 cut(s)	297
BslFI	GGGAC	2 cut(s)	749, 879
BslI	CCNNNNNNNGG	2 cut(s)	1093, 1166
BsmAI	GTCTC	2 cut(s)	1453, 1462
BsmFI	GGGAC	2 cut(s)	749, 879
BsmI	GAATGC	1 cut(s)	1227
BsnI	GGCC	3 cut(s)	293, 720, 888
BsoBI	CYCGRG	2 cut(s)	155, 1079
Bsp1286I	GDGCHC	2 cut(s)	109, 1314
Bsp1407I	TGTACA	1 cut(s)	99
Bsp143I	GATC	8 cut(s)	207, 217, 325, 790, 904, 1005, 1024, 1285
Bsp19I	CCATGG	1 cut(s)	406
BspACI	CCGC	1 cut(s)	294
BspANI	GGCC	3 cut(s)	293, 720, 888
BspCNI	CTCAG	1 cut(s)	1458
BspDI	ATCGAT	1 cut(s)	907
BspLI	GGNNCC	4 cut(s)	301, 564, 792, 1085
BspMAI	CTGCAG	2 cut(s)	525, 814
BspMI	ACCTGC	1 cut(s)	1336
BspOI	GCTAGC	1 cut(s)	1389
BspPI	GGATC	4 cut(s)	225, 785, 798, 1013
BspQI	GCTCTTC	1 cut(s)	339
BsrDI	GCAATG	2 cut(s)	12, 1222
BsrFI	RCCGGY	1 cut(s)	296
BsrGI	TGTACA	1 cut(s)	99
BssAI	RCCGGY	1 cut(s)	296
BssECI	CCNNGG	3 cut(s)	406, 898, 1104
BssMI	GATC	8 cut(s)	207, 217, 325, 790, 904, 1005, 1024, 1285
BssNAI	GTATAC	1 cut(s)	1351
BssT1I	CCWWGG	3 cut(s)	406, 898, 1104
Bst1107I	GTATAC	1 cut(s)	1351
Bst2UI	CCWGG	2 cut(s)	262, 717
Bst4CI	ACNGT	3 cut(s)	97, 833, 1193
Bst6I	CTCTTC	1 cut(s)	339
BstAPI	GCANNNNNTGC	1 cut(s)	583
BstAUI	TGTACA	1 cut(s)	99
BstBAI	YACGTR	1 cut(s)	963
BstC8I	GCNNGC	4 cut(s)	778, 846, 1314, 1387
BstDEI	CTNAG	2 cut(s)	781, 1466
BstDSI	CCRYGG	1 cut(s)	406
BstF5I	GGATG	4 cut(s)	114, 220, 328, 564
BstHHI	GCGC	2 cut(s)	712, 1219
BstKTI	GATC	8 cut(s)	210, 220, 328, 793, 907, 1008, 1027, 1288
BstMAI	GTCTC	2 cut(s)	1453, 1462
BstMBI	GATC	8 cut(s)	207, 217, 325, 790, 904, 1005, 1024, 1285
BstMWI	GCNNNNNNNGC	4 cut(s)	143, 583, 826, 1313
BstNI	CCWGG	2 cut(s)	262, 717
BstNSI	RCATGY	1 cut(s)	848
BstPAI	GACNNNNGTC	1 cut(s)	523
BstSCI	CCNGG	2 cut(s)	260, 715
BstSFI	CTRYAG	3 cut(s)	147, 521, 810
BstSNI	TACGTA	1 cut(s)	963
BstV1I	GCAGC	5 cut(s)	589, 760, 1036, 1211, 1376
BstV2I	GAAGAC	2 cut(s)	299, 1067
BstX2I	RGATCY	1 cut(s)	790
BstYI	RGATCY	1 cut(s)	790
BstZ17I	GTATAC	1 cut(s)	1351
Bsu15I	ATCGAT	1 cut(s)	907
BsuI	GTATCC	2 cut(s)	584, 681
BsuRI	GGCC	3 cut(s)	293, 720, 888
BsuTUI	ATCGAT	1 cut(s)	907
BtgI	CCRYGG	1 cut(s)	406
BtsCI	GGATG	4 cut(s)	114, 220, 328, 564
BtsI	GCAGTG	2 cut(s)	241, 252
BtsIMutI	CAGTG	5 cut(s)	93, 241, 252, 1015, 1353
BveI	ACCTGC	1 cut(s)	1336
Cac8I	GCNNGC	4 cut(s)	778, 846, 1314, 1387
CfoI	GCGC	2 cut(s)	712, 1219
Cfr10I	RCCGGY	1 cut(s)	296
Cfr13I	GGNCC	2 cut(s)	1084, 1193
ClaI	ATCGAT	1 cut(s)	907
CseI	GACGC	1 cut(s)	791
Csp6I	GTAC	3 cut(s)	64, 100, 197
CviAII	CATG	9 cut(s)	280, 407, 552, 587, 647, 653, 845, 1014, 1246
CviQI	GTAC	3 cut(s)	64, 100, 197
DdeI	CTNAG	2 cut(s)	781, 1466
DpnI	GATC	8 cut(s)	209, 219, 327, 792, 906, 1007, 1026, 1287
DpnII	GATC	8 cut(s)	207, 217, 325, 790, 904, 1005, 1024, 1285
DraI	TTTAAA	1 cut(s)	760
DriI	GACNNNNNGTC	1 cut(s)	613
EaeI	YGGCCR	1 cut(s)	291
Eam1104I	CTCTTC	1 cut(s)	339
Eam1105I	GACNNNNNGTC	1 cut(s)	613
EarI	CTCTTC	1 cut(s)	339
Ecl136II	GAGCTC	2 cut(s)	107, 1312
Eco105I	TACGTA	1 cut(s)	963
Eco130I	CCWWGG	3 cut(s)	406, 898, 1104
Eco24I	GRGCYC	2 cut(s)	109, 1314
Eco47I	GGWCC	2 cut(s)	1084, 1193
Eco53kI	GAGCTC	2 cut(s)	107, 1312
Eco88I	CYCGRG	2 cut(s)	155, 1079
EcoICRI	GAGCTC	2 cut(s)	107, 1312
EcoRI	GAATTC	1 cut(s)	938
EcoRII	CCWGG	2 cut(s)	260, 715
EcoT14I	CCWWGG	3 cut(s)	406, 898, 1104
EcoT38I	GRGCYC	2 cut(s)	109, 1314
ErhI	CCWWGG	3 cut(s)	406, 898, 1104
FaeI	CATG	9 cut(s)	283, 410, 555, 590, 650, 656, 848, 1017, 1249
FalI	AAGNNNNNCTT	2 cut(s)	17, 49
FaqI	GGGAC	2 cut(s)	749, 879
FatI	CATG	9 cut(s)	279, 406, 551, 586, 646, 652, 844, 1013, 1245
FbaI	TGATCA	2 cut(s)	325, 1285
FblI	GTMKAC	1 cut(s)	1350
Fnu4HI	GCNGC	6 cut(s)	294, 578, 774, 1050, 1200, 1390
FokI	GGATG	4 cut(s)	101, 207, 315, 571
FriOI	GRGCYC	2 cut(s)	109, 1314
Fsp4HI	GCNGC	6 cut(s)	294, 578, 774, 1050, 1200, 1390
FspBI	CTAG	6 cut(s)	635, 1028, 1155, 1329, 1386, 1412
GlaI	GCGC	2 cut(s)	711, 1218
GluI	GCNGC	6 cut(s)	294, 578, 774, 1050, 1200, 1390
GsuI	CTGGAG	2 cut(s)	549, 1475
HaeIII	GGCC	3 cut(s)	293, 720, 888
HapII	CCGG	1 cut(s)	297
HgaI	GACGC	1 cut(s)	791
HhaI	GCGC	2 cut(s)	712, 1219
Hin1II	CATG	9 cut(s)	283, 410, 555, 590, 650, 656, 848, 1017, 1249
Hin6I	GCGC	2 cut(s)	710, 1217
HinP1I	GCGC	2 cut(s)	710, 1217
HincII	GTYRAC	1 cut(s)	1477
HindII	GTYRAC	1 cut(s)	1477
HindIII	AAGCTT	1 cut(s)	818
HinfI	GANTC	7 cut(s)	43, 184, 265, 506, 1126, 1172, 1181
HpaII	CCGG	1 cut(s)	297
HphI	GGTGA	2 cut(s)	914, 980
Hpy166II	GTNNAC	4 cut(s)	100, 1189, 1351, 1477
Hpy188I	TCNGA	4 cut(s)	325, 545, 873, 1112
Hpy188III	TCNNGA	5 cut(s)	157, 358, 566, 881, 1028
Hpy8I	GTNNAC	4 cut(s)	100, 1189, 1351, 1477
Hpy99I	CGWCG	1 cut(s)	192
HpyAV	CCTTC	1 cut(s)	676
HpyCH4III	ACNGT	3 cut(s)	97, 833, 1193
HpyCH4IV	ACGT	2 cut(s)	850, 962
HpyF10VI	GCNNNNNNNGC	4 cut(s)	143, 583, 826, 1313
HpyF3I	CTNAG	2 cut(s)	781, 1466
HpySE526I	ACGT	2 cut(s)	850, 962
Hsp92II	CATG	9 cut(s)	283, 410, 555, 590, 650, 656, 848, 1017, 1249
HspAI	GCGC	2 cut(s)	710, 1217
Ksp22I	TGATCA	2 cut(s)	325, 1285
Kzo9I	GATC	8 cut(s)	207, 217, 325, 790, 904, 1005, 1024, 1285
LguI	GCTCTTC	1 cut(s)	339
LmnI	GCTCC	3 cut(s)	568, 661, 1224
Lsp1109I	GCAGC	5 cut(s)	589, 760, 1036, 1211, 1376
LweI	GCATC	2 cut(s)	123, 1332
MaeI	CTAG	6 cut(s)	635, 1028, 1155, 1329, 1386, 1412
MaeII	ACGT	2 cut(s)	850, 962
MaeIII	GTNAC	3 cut(s)	358, 968, 1324
MalI	GATC	8 cut(s)	209, 219, 327, 792, 906, 1007, 1026, 1287
MboI	GATC	8 cut(s)	207, 217, 325, 790, 904, 1005, 1024, 1285
MboII	GAAGA	7 cut(s)	40, 80, 299, 356, 829, 1072, 1268
MfeI	CAATTG	1 cut(s)	581
MflI	RGATCY	1 cut(s)	790
MhlI	GDGCHC	2 cut(s)	109, 1314
MluCI	AATT	8 cut(s)	11, 129, 451, 581, 860, 876, 938, 1018
MlyI	GAGTC	2 cut(s)	274, 1135
MmeI	TCCRAC	1 cut(s)	523
MnlI	CCTC	7 cut(s)	164, 723, 925, 949, 995, 1024, 1312
MseI	TTAA	8 cut(s)	20, 318, 429, 450, 468, 759, 1037, 1394
MslI	CAYNNNNRTG	5 cut(s)	333, 405, 423, 651, 1250
MspI	CCGG	1 cut(s)	297
MspR9I	CCNGG	2 cut(s)	262, 717
MunI	CAATTG	1 cut(s)	581
Mva1269I	GAATGC	1 cut(s)	1227
MvaI	CCWGG	2 cut(s)	262, 717
MwoI	GCNNNNNNNGC	4 cut(s)	143, 583, 826, 1313
NcoI	CCATGG	1 cut(s)	406
NdeII	GATC	8 cut(s)	207, 217, 325, 790, 904, 1005, 1024, 1285
NheI	GCTAGC	1 cut(s)	1385
NlaIII	CATG	9 cut(s)	283, 410, 555, 590, 650, 656, 848, 1017, 1249
NlaIV	GGNNCC	4 cut(s)	301, 564, 792, 1085
NmuCI	GTSAC	2 cut(s)	358, 968
NspI	RCATGY	1 cut(s)	848
PaeI	GCATGC	1 cut(s)	848
PaeR7I	CTCGAG	1 cut(s)	155
PciSI	GCTCTTC	1 cut(s)	339
PctI	GAATGC	1 cut(s)	1227
PfeI	GAWTC	5 cut(s)	43, 184, 506, 1172, 1181
PflMI	CCANNNNNTGG	1 cut(s)	1166
PkrI	GCNGC	6 cut(s)	295, 579, 775, 1051, 1201, 1391
PleI	GAGTC	2 cut(s)	273, 1134
PpsI	GAGTC	2 cut(s)	273, 1134
Ppu21I	YACGTR	1 cut(s)	963
PshAI	GACNNNNGTC	1 cut(s)	523
PshBI	ATTAAT	1 cut(s)	450
Psp124BI	GAGCTC	2 cut(s)	109, 1314
Psp6I	CCWGG	2 cut(s)	260, 715
PspGI	CCWGG	2 cut(s)	260, 715
PspN4I	GGNNCC	4 cut(s)	301, 564, 792, 1085
PspPI	GGNCC	2 cut(s)	1084, 1193
PstI	CTGCAG	2 cut(s)	525, 814
PsuI	RGATCY	1 cut(s)	790
RsaI	GTAC	3 cut(s)	65, 101, 198
RsaNI	GTAC	3 cut(s)	64, 100, 197
RseI	CAYNNNNRTG	5 cut(s)	333, 405, 423, 651, 1250
SacI	GAGCTC	2 cut(s)	109, 1314
SapI	GCTCTTC	1 cut(s)	339
SaqAI	TTAA	8 cut(s)	20, 318, 429, 450, 468, 759, 1037, 1394
SatI	GCNGC	6 cut(s)	294, 578, 774, 1050, 1200, 1390
Sau3AI	GATC	8 cut(s)	207, 217, 325, 790, 904, 1005, 1024, 1285
Sau96I	GGNCC	2 cut(s)	1084, 1193
SchI	GAGTC	2 cut(s)	274, 1135
ScrFI	CCNGG	2 cut(s)	262, 717
SduI	GDGCHC	2 cut(s)	109, 1314
SfaNI	GCATC	2 cut(s)	123, 1332
SfcI	CTRYAG	3 cut(s)	147, 521, 810
Sfr274I	CTCGAG	1 cut(s)	155
SinI	GGWCC	2 cut(s)	1084, 1193
SlaI	CTCGAG	1 cut(s)	155
SmiMI	CAYNNNNRTG	5 cut(s)	333, 405, 423, 651, 1250
SmlI	CTYRAG	1 cut(s)	155
SmoI	CTYRAG	1 cut(s)	155
SnaBI	TACGTA	1 cut(s)	963
SpeI	ACTAGT	2 cut(s)	1328, 1411
SphI	GCATGC	1 cut(s)	848
Sse9I	AATT	8 cut(s)	11, 129, 451, 581, 860, 876, 938, 1018
SsiI	CCGC	1 cut(s)	294
SspMI	CTAG	6 cut(s)	635, 1028, 1155, 1329, 1386, 1412
SstI	GAGCTC	2 cut(s)	109, 1314
StyD4I	CCNGG	2 cut(s)	260, 715
StyI	CCWWGG	3 cut(s)	406, 898, 1104
TaaI	ACNGT	3 cut(s)	97, 833, 1193
TaiI	ACGT	2 cut(s)	853, 965
TaqI	TCGA	3 cut(s)	156, 187, 907
TasI	AATT	8 cut(s)	11, 129, 451, 581, 860, 876, 938, 1018
TatI	WGTACW	2 cut(s)	99, 196
TauI	GCSGC	1 cut(s)	296
TfiI	GAWTC	5 cut(s)	43, 184, 506, 1172, 1181
Tru1I	TTAA	8 cut(s)	20, 318, 429, 450, 468, 759, 1037, 1394
Tru9I	TTAA	8 cut(s)	20, 318, 429, 450, 468, 759, 1037, 1394
TscAI	CASTG	5 cut(s)	100, 248, 259, 1015, 1360
TseFI	GTSAC	2 cut(s)	358, 968
TseI	GCWGC	5 cut(s)	577, 773, 1049, 1199, 1389
Tsp45I	GTSAC	2 cut(s)	358, 968
TspDTI	ATGAA	5 cut(s)	141, 695, 744, 1089, 1454
TspGWI	ACGGA	1 cut(s)	27
TspRI	CASTG	5 cut(s)	100, 248, 259, 1015, 1360
Van91I	CCANNNNNTGG	1 cut(s)	1166
VpaK11BI	GGWCC	2 cut(s)	1084, 1193
VspI	ATTAAT	1 cut(s)	450
XapI	RAATTY	4 cut(s)	11, 860, 938, 1018
XbaI	TCTAGA	1 cut(s)	1027
XceI	RCATGY	1 cut(s)	848
XhoI	CTCGAG	1 cut(s)	155
XmiI	GTMKAC	1 cut(s)	1350
XspI	CTAG	6 cut(s)	635, 1028, 1155, 1329, 1386, 1412

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.