Rorug02G0557300

Serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
Physical Location & Seq
Reverse (-)
68385399 .. 68389614
4216 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0557300.1

Sequence Viewer

Length: 1350 bp
ATGAAGCACTACCAAGCCAATCTTCATGATCATGAGCTTCCCTCTGGGAAATACCAGGCACTTATACTAAAGCCTCCCAAAAAAATTGTTCTTCTAGTCTTTGCCCTACTTCTTCTTACAATAATCCCATTCTATTACTCTTCATTAAGCAACTCTTTTTTCCTTAGAAAAACTATTCCAAACCCACCATCACTACCCTCTTCTCCATCATATGATGAAGAAGCTCATGAGGAGTTGCCAACCATAACTAATAATCTAAAGTGTGACATATTTAGTGGAGAATGGATTCCAAATCCAGAGGCTCCCTATTACACAAACACGACATGTTGGGCGATTCACGAGCATCAGAACTGCCAGAAATATGGAAGACCAGACTCAGAGTTCATGAAATGGAAGTGGAAGCCCGACGGGTGTGAACTGCCCGTTTTCAACCCGGCTCAGTTCCTTGAATTGCTCCGAGGGAAATCATTGGCCTTCGTTGGAGATTCTGTGGGTAGAAATCAAATGCAGTCACTGATATGCCTTCTTTCTAGGGTGGAATATCCGATAGATGTTTCATACACAAAGGATGAGAAATACAAACGCTGGAAATACACATCCTACAACTTCACCATGGCCTCATTTTGGACGCCACATTTGATCAAATCCAAAGAAGAAGACAGTCATGGTCCAACCAACACTGGTATTTTCGGTCTCTACCTCGACGAACTCGATGAGGCATGGACAAGCCAAGTTGAGGACTTTGATTACCTCATTATTTCCGGAGGGCATTGGTTCATGCGATCCATGGTGTTCCATGAAAATAACAAAATCTCAGGTTGTCACTATTGCCTCTTAGACAATGTGCCTGACTTGGGAATGTTCTACGGCTACAGAAAGGCGTTTAGGACAGCTTTTAAGGCCATCAACAGCTTGAAAAATTACAAGGGTATAACGTACCTTAGGACTTTTGCACCATCACATTTTGAGAATGGGATGTGGAACAAAGGAGGGAATTGTGTGAGAACGAAGCCGTTTAGGAGCAATGAGACCCAATTGGAGGGTGCCAGTTTGGAGTTTTACATGATTCAATTAGAGGAATTTAGGACTGCTGAGAAGGAAGGGAGAAAGAAGGGGTTAAAATATAGGTTATTGGACACAACACAAGCCACGTTACTAAGGCCAGATGGTCATCCTAGTAGATATGGGCATTGGCCAGAGGAAAATGTGACTTTGTATAATGACTGTGTGCATTGGTGCCTGCCAGGACCTATTGATACTTGGGGTGATTTCTTGCTTGAGATGTTGAAGATGGAGGGTATCAGATCAGCTGAGGAGAAGCGCTATTCAAGAGATAGAAGAATGCATTGA

Protein Analysis

449

Amino Acids

52.42

Weight (kDa)

6.97

Isoelectric Point (pI)

38.4

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PMR5N PF14416 87 - 139 5.5e-21 PMR5 N terminal Domain
PC-Esterase PF13839 140 - 428 2.4e-94 GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 1043, 1236
AccIII TCCGGA 1 cut(s) 761
AclWI GGATC 1 cut(s) 777
AcoI YGGCCR 1 cut(s) 1193
AcsI RAATTY 1 cut(s) 1079
AcyI GRCGYC 1 cut(s) 629
AfaI GTAC 1 cut(s) 938
AfeI AGCGCT 1 cut(s) 1322
AfiI CCNNNNNNNGG 4 cut(s) 624, 736, 854, 1039
AflIII ACRYGT 1 cut(s) 323
AgsI TTSAA 6 cut(s) 430, 449, 916, 1070, 1288, 1329
AjnI CCWGG 2 cut(s) 54, 1243
AjuI GAANNNNNNNTTGG 1 cut(s) 38
AluBI AGCT 5 cut(s) 37, 224, 893, 912, 1310
AluI AGCT 5 cut(s) 37, 224, 893, 912, 1310
Alw26I GTCTC 2 cut(s) 698, 1022
AlwI GGATC 1 cut(s) 777
AlwNI CAGNNNCTG 1 cut(s) 514
Aor13HI TCCGGA 1 cut(s) 761
Aor51HI AGCGCT 1 cut(s) 1322
AoxI GGCC 5 cut(s) 471, 615, 900, 1160, 1193
ApoI RAATTY 1 cut(s) 1079
ArsI GACNNNNNNTTYG 2 cut(s) 619, 651
Asp700I GAANNNNTTC 1 cut(s) 285
AspLEI GCGC 1 cut(s) 1323
AspS9I GGNCC 2 cut(s) 668, 1247
AsuC2I CCSGG 1 cut(s) 434
AsuHPI GGTGA 2 cut(s) 601, 1277
AvaII GGWCC 2 cut(s) 668, 1247
AxyI CCTNAGG 1 cut(s) 941
BalI TGGCCA 1 cut(s) 1195
BanI GGYRCC 2 cut(s) 1043, 1236
BauI CACGAG 1 cut(s) 338
BbsI GAAGAC 2 cut(s) 373, 663
BbvCI CCTCAGC 1 cut(s) 1311
BccI CCATC 6 cut(s) 196, 214, 911, 964, 1160, 1285
BceAI ACGGC 2 cut(s) 883, 997
BciT130I CCWGG 2 cut(s) 56, 1245
BclI TGATCA 2 cut(s) 28, 639
BcnI CCSGG 1 cut(s) 434
BcoDI GTCTC 2 cut(s) 698, 1022
BfaI CTAG 3 cut(s) 95, 531, 1176
BfmI CTRYAG 1 cut(s) 871
BfoI RGCGCY 1 cut(s) 1324
Bme1390I CCNGG 3 cut(s) 56, 434, 1245
Bme18I GGWCC 2 cut(s) 668, 1247
BmgT120I GGNCC 2 cut(s) 668, 1247
BmiI GGNNCC 3 cut(s) 303, 1045, 1238
BmrFI CCNGG 3 cut(s) 56, 434, 1245
BmsI GCATC 1 cut(s) 352
BpiI GAAGAC 2 cut(s) 373, 663
BplI GAGNNNNNCTC 2 cut(s) 26, 58
Bpu10I CCTNAGC 1 cut(s) 1311
BpuEI CTTGAG 1 cut(s) 1298
BpuMI CCSGG 1 cut(s) 434
BsaBI GATNNNNATC 1 cut(s) 1170
BsaHI GRCGYC 1 cut(s) 629
BsaI GGTCTC 2 cut(s) 698, 1022
BsaJI CCNNGG 3 cut(s) 457, 612, 786
BsaWI WCCGGW 1 cut(s) 761
BsaXI ACNNNNNCTCC 2 cut(s) 474, 504
Bsc4I CCNNNNNNNGG 4 cut(s) 624, 736, 854, 1039
Bse1I ACTGG 2 cut(s) 685, 1047
Bse21I CCTNAGG 1 cut(s) 941
Bse3DI GCAATG 1 cut(s) 1030
Bse8I GATNNNNATC 1 cut(s) 1170
BseAI TCCGGA 1 cut(s) 761
BseBI CCWGG 2 cut(s) 56, 1245
BseDI CCNNGG 3 cut(s) 457, 612, 786
BseGI GGATG 4 cut(s) 574, 596, 981, 1171
BseJI GATNNNNATC 1 cut(s) 1170
BseLI CCNNNNNNNGG 4 cut(s) 624, 736, 854, 1039
BseMI GCAATG 1 cut(s) 1030
BseMII CTCAG 5 cut(s) 390, 452, 828, 1083, 1302
BseNI ACTGG 2 cut(s) 685, 1047
BseRI GAGGAG 2 cut(s) 245, 1328
BshFI GGCC 5 cut(s) 473, 617, 902, 1162, 1195
BshNI GGYRCC 2 cut(s) 1043, 1236
BsiSI CCGG 2 cut(s) 434, 762
BslI CCNNNNNNNGG 4 cut(s) 624, 736, 854, 1039
BsmAI GTCTC 2 cut(s) 698, 1022
BsmI GAATGC 1 cut(s) 1347
BsnI GGCC 5 cut(s) 473, 617, 902, 1162, 1195
Bso31I GGTCTC 2 cut(s) 698, 1022
Bsp13I TCCGGA 1 cut(s) 761
Bsp143I GATC 4 cut(s) 28, 639, 782, 1304
Bsp19I CCATGG 2 cut(s) 612, 786
BspANI GGCC 5 cut(s) 473, 617, 902, 1162, 1195
BspCNI CTCAG 5 cut(s) 389, 451, 827, 1084, 1303
BspEI TCCGGA 1 cut(s) 761
BspHI TCATGA 4 cut(s) 25, 31, 226, 384
BspLI GGNNCC 3 cut(s) 303, 1045, 1238
BspPI GGATC 1 cut(s) 777
BspT107I GGYRCC 2 cut(s) 1043, 1236
BspTNI GGTCTC 2 cut(s) 698, 1022
BsrDI GCAATG 1 cut(s) 1030
BsrI ACTGG 2 cut(s) 685, 1047
BssECI CCNNGG 3 cut(s) 457, 612, 786
BssMI GATC 4 cut(s) 28, 639, 782, 1304
BssNI GRCGYC 1 cut(s) 629
BssSI CACGAG 1 cut(s) 338
BssT1I CCWWGG 2 cut(s) 612, 786
Bst2BI CACGAG 1 cut(s) 338
Bst2UI CCWGG 2 cut(s) 56, 1245
Bst4CI ACNGT 2 cut(s) 662, 1226
Bst6I CTCTTC 2 cut(s) 145, 205
BstACI GRCGYC 1 cut(s) 629
BstC8I GCNNGC 1 cut(s) 1241
BstDEI CTNAG 9 cut(s) 164, 376, 438, 814, 835, 941, 1092, 1157, 1311
BstDSI CCRYGG 2 cut(s) 612, 786
BstF5I GGATG 4 cut(s) 574, 596, 981, 1171
BstH2I RGCGCY 1 cut(s) 1324
BstHHI GCGC 1 cut(s) 1323
BstKTI GATC 4 cut(s) 31, 642, 785, 1307
BstMAI GTCTC 2 cut(s) 698, 1022
BstMBI GATC 4 cut(s) 28, 639, 782, 1304
BstMWI GCNNNNNNNGC 1 cut(s) 899
BstNI CCWGG 2 cut(s) 56, 1245
BstNSI RCATGY 1 cut(s) 327
BstSCI CCNGG 3 cut(s) 54, 432, 1243
BstSFI CTRYAG 1 cut(s) 871
BstV2I GAAGAC 2 cut(s) 373, 663
BstXI CCANNNNNNTGG 1 cut(s) 362
Bsu36I CCTNAGG 1 cut(s) 941
BsuRI GGCC 5 cut(s) 473, 617, 902, 1162, 1195
BtgI CCRYGG 2 cut(s) 612, 786
BtsCI GGATG 4 cut(s) 574, 596, 981, 1171
BtsIMutI CAGTG 2 cut(s) 512, 678
Cac8I GCNNGC 1 cut(s) 1241
CaiI CAGNNNCTG 1 cut(s) 514
CciI TCATGA 4 cut(s) 25, 31, 226, 384
CfoI GCGC 1 cut(s) 1323
Cfr13I GGNCC 2 cut(s) 668, 1247
CseI GACGC 1 cut(s) 637
Csp6I GTAC 1 cut(s) 937
CviQI GTAC 1 cut(s) 937
DdeI CTNAG 9 cut(s) 164, 376, 438, 814, 835, 941, 1092, 1157, 1311
DpnI GATC 4 cut(s) 30, 641, 784, 1306
DpnII GATC 4 cut(s) 28, 639, 782, 1304
EaeI YGGCCR 1 cut(s) 1193
Eam1104I CTCTTC 2 cut(s) 145, 205
EarI CTCTTC 2 cut(s) 145, 205
Eco130I CCWWGG 2 cut(s) 612, 786
Eco31I GGTCTC 2 cut(s) 698, 1022
Eco47I GGWCC 2 cut(s) 668, 1247
Eco47III AGCGCT 1 cut(s) 1322
Eco81I CCTNAGG 1 cut(s) 941
EcoO109I RGGNCCY 1 cut(s) 1247
EcoRII CCWGG 2 cut(s) 54, 1243
EcoT14I CCWWGG 2 cut(s) 612, 786
EcoT22I ATGCAT 1 cut(s) 1347
ErhI CCWWGG 2 cut(s) 612, 786
FalI AAGNNNNNCTT 3 cut(s) 38, 139, 171
FauNDI CATATG 1 cut(s) 211
FbaI TGATCA 2 cut(s) 28, 639
FokI GGATG 4 cut(s) 581, 583, 988, 1158
FspBI CTAG 3 cut(s) 95, 531, 1176
GlaI GCGC 1 cut(s) 1322
HaeII RGCGCY 1 cut(s) 1324
HaeIII GGCC 5 cut(s) 473, 617, 902, 1162, 1195
HapII CCGG 2 cut(s) 434, 762
HgaI GACGC 1 cut(s) 637
HhaI GCGC 1 cut(s) 1323
Hin1I GRCGYC 1 cut(s) 629
Hin6I GCGC 1 cut(s) 1321
HinP1I GCGC 1 cut(s) 1321
HinfI GANTC 5 cut(s) 286, 334, 374, 485, 1066
HpaII CCGG 2 cut(s) 434, 762
HphI GGTGA 2 cut(s) 601, 1277
Hpy166II GTNNAC 1 cut(s) 416
Hpy188I TCNGA 5 cut(s) 348, 379, 458, 546, 1304
Hpy188III TCNNGA 8 cut(s) 26, 32, 227, 296, 338, 385, 762, 1329
Hpy8I GTNNAC 1 cut(s) 416
Hpy99I CGWCG 2 cut(s) 410, 707
HpyAV CCTTC 5 cut(s) 484, 533, 1090, 1094, 1105
HpyCH4III ACNGT 2 cut(s) 662, 1226
HpyCH4IV ACGT 2 cut(s) 935, 1151
HpyCH4V TGCA 4 cut(s) 508, 953, 1231, 1345
HpyF10VI GCNNNNNNNGC 1 cut(s) 899
HpyF3I CTNAG 9 cut(s) 164, 376, 438, 814, 835, 941, 1092, 1157, 1311
HpySE526I ACGT 2 cut(s) 935, 1151
Hsp92I GRCGYC 1 cut(s) 629
HspAI GCGC 1 cut(s) 1321
Kpn2I TCCGGA 1 cut(s) 761
Ksp22I TGATCA 2 cut(s) 28, 639
Kzo9I GATC 4 cut(s) 28, 639, 782, 1304
LmnI GCTCC 3 cut(s) 307, 459, 1020
LweI GCATC 1 cut(s) 352
MaeI CTAG 3 cut(s) 95, 531, 1176
MaeII ACGT 2 cut(s) 935, 1151
MaeIII GTNAC 5 cut(s) 263, 510, 821, 1152, 1207
MalI GATC 4 cut(s) 30, 641, 784, 1306
MboI GATC 4 cut(s) 28, 639, 782, 1304
MfeI CAATTG 1 cut(s) 1034
MlsI TGGCCA 1 cut(s) 1195
MluCI AATT 7 cut(s) 84, 449, 919, 994, 1034, 1070, 1079
MluNI TGGCCA 1 cut(s) 1195
MlyI GAGTC 1 cut(s) 368
MmeI TCCRAC 2 cut(s) 460, 695
Mox20I TGGCCA 1 cut(s) 1195
Mph1103I ATGCAT 1 cut(s) 1347
MroI TCCGGA 1 cut(s) 761
MroXI GAANNNNTTC 1 cut(s) 285
MscI TGGCCA 1 cut(s) 1195
MseI TTAA 3 cut(s) 146, 897, 1118
MslI CAYNNNNRTG 2 cut(s) 30, 517
Msp20I TGGCCA 1 cut(s) 1195
MspA1I CMGCKG 1 cut(s) 1310
MspI CCGG 2 cut(s) 434, 762
MspR9I CCNGG 3 cut(s) 56, 434, 1245
MunI CAATTG 1 cut(s) 1034
Mva1269I GAATGC 1 cut(s) 1347
MvaI CCWGG 2 cut(s) 56, 1245
MwoI GCNNNNNNNGC 1 cut(s) 899
NciI CCSGG 1 cut(s) 434
NcoI CCATGG 2 cut(s) 612, 786
NdeI CATATG 1 cut(s) 211
NdeII GATC 4 cut(s) 28, 639, 782, 1304
NlaIV GGNNCC 3 cut(s) 303, 1045, 1238
NmuCI GTSAC 4 cut(s) 263, 510, 821, 1207
NsiI ATGCAT 1 cut(s) 1347
NspI RCATGY 1 cut(s) 327
PagI TCATGA 4 cut(s) 25, 31, 226, 384
PciI ACATGT 1 cut(s) 323
PcsI WCGNNNNNNNCGW 1 cut(s) 708
PctI GAATGC 1 cut(s) 1347
PdmI GAANNNNTTC 1 cut(s) 285
PfeI GAWTC 4 cut(s) 286, 334, 485, 1066
PleI GAGTC 1 cut(s) 368
PpsI GAGTC 1 cut(s) 368
PpuMI RGGWCCY 1 cut(s) 1247
PscI ACATGT 1 cut(s) 323
Psp5II RGGWCCY 1 cut(s) 1247
Psp6I CCWGG 2 cut(s) 54, 1243
PspGI CCWGG 2 cut(s) 54, 1243
PspN4I GGNNCC 3 cut(s) 303, 1045, 1238
PspPI GGNCC 2 cut(s) 668, 1247
PspPPI RGGWCCY 1 cut(s) 1247
PstNI CAGNNNCTG 1 cut(s) 514
PvuII CAGCTG 1 cut(s) 1310
RsaI GTAC 1 cut(s) 938
RsaNI GTAC 1 cut(s) 937
RseI CAYNNNNRTG 2 cut(s) 30, 517
SaqAI TTAA 3 cut(s) 146, 897, 1118
Sau3AI GATC 4 cut(s) 28, 639, 782, 1304
Sau96I GGNCC 2 cut(s) 668, 1247
SchI GAGTC 1 cut(s) 368
ScrFI CCNGG 3 cut(s) 56, 434, 1245
SfaNI GCATC 1 cut(s) 352
SfcI CTRYAG 1 cut(s) 871
SinI GGWCC 2 cut(s) 668, 1247
SmiMI CAYNNNNRTG 2 cut(s) 30, 517
SmlI CTYRAG 1 cut(s) 1277
SmoI CTYRAG 1 cut(s) 1277
Sse9I AATT 7 cut(s) 84, 449, 919, 994, 1034, 1070, 1079
SspMI CTAG 3 cut(s) 95, 531, 1176
StyD4I CCNGG 3 cut(s) 54, 432, 1243
StyI CCWWGG 2 cut(s) 612, 786
TaaI ACNGT 2 cut(s) 662, 1226
TaiI ACGT 2 cut(s) 938, 1154
TaqI TCGA 2 cut(s) 702, 711
TaqII GACCGA 1 cut(s) 680
TasI AATT 7 cut(s) 84, 449, 919, 994, 1034, 1070, 1079
TfiI GAWTC 4 cut(s) 286, 334, 485, 1066
Tru1I TTAA 3 cut(s) 146, 897, 1118
Tru9I TTAA 3 cut(s) 146, 897, 1118
TscAI CASTG 2 cut(s) 519, 685
TseFI GTSAC 4 cut(s) 263, 510, 821, 1207
Tsp45I GTSAC 4 cut(s) 263, 510, 821, 1207
TspDTI ATGAA 9 cut(s) 14, 17, 132, 231, 373, 401, 546, 766, 813
TspRI CASTG 2 cut(s) 519, 685
VpaK11BI GGWCC 2 cut(s) 668, 1247
XapI RAATTY 1 cut(s) 1079
XceI RCATGY 1 cut(s) 327
XmnI GAANNNNTTC 1 cut(s) 285
XspI CTAG 3 cut(s) 95, 531, 1176
Zsp2I ATGCAT 1 cut(s) 1347
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.