RLG00000005891

Serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr2
Physical Location & Seq
Forward (+)
2593318 .. 2598153
4836 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000005891

Sequence Viewer

Length: 1830 bp
ATGGAAATTTTATTACACAAGAAGAACTTTCCGTTGAATCACAAAGACTACACATTGTACGAAGAAGTTGGTCAGGGTGTGAGTGCCACTGTGTACAGAGCTCTCTGCATCCCACTTGATGAAATTGTTGCCATCAAAGTTATAGACCTCGAGAAGTGCAACAATGATATGGATATGATTCGACGAGAAGTACAGACTATGATCTTGCTGGATCATCCTAATCTGCTGAAAGCACACTGCTCTTTCACTGCTACCAGGAGTCTGTGGATTGTCATGCCTTACATGGCCGCCGGTTCCTGTCTTCACATCATTAAGTCTGATCATCCCAATGGTTTTGAAGAGCATACCATATTGACATTGTTGTATGGGGTTATCAAAGCTCTTGCTTATCTACATTCCCATGGCTACATTCACAGAGATGTTAAGGCTGGAAATATACTGATTAATTCAAAAGGAGCAGTTAAGTTAGCAGACTTTGGTGTTTCAACGAGCTTGTTTGATTCTGGCAATAGACTGCAGTCAAAAAACACCTTTGTCGGAACTCCATGCTGGATGGCTCCAGAAGTTATGCAGCAATTGCATGGATACGACTTCAAAGCAGACATCTGGTCATTTGGGATAACAGCACTAGAACTTGCTCATGGTCATGCTCCATTCTCCAAGTATCCACCAATGAAGGTTTTGCTGATGACCTTACAAAATGCGCCTCCTGGCCTTGACTATGAAAGGGACAAGCGATTTTCAAAGTCCTTTAAAGAGATAGTAGCTGCTTGCTTAGTAAAGGATCCACAGAAGCGTCCTACTGCAGAGAAGCTTTTGAAGCACCGTTTCTTCAAGCATGCACGTTCAAAGGAATTTATAGTTCGGACAATTCTTGATGGCCTTTGTCCCCTTGGTGATCGATTTAGAATGTTGAAGCAAAAAGAGGCTGAATTGTTTGCACAAAATGAGGCTACGTATGGTGACGAGCATTTATCACAGCAAAAGTATATACGAGGGATCAGTGCATGGAATTTTGATCTAGAGGACTTAAAAAGACAGGCTGCTCTTATTCAGGATGATGATGGCATCGCATTTGCAGAAAATCAAGAGTGGATCTGCAAACATAAGGGTGAAATTGATGTCTCAGTTGATCTATTAAATAGATCAACATGGAAAGATGCGGACTTCAAAAAATTTGAAGAACCTGTTGACTCATCAAAATTGAGGCAAGGAGAAAAGAGTAGCTATTTTGGAGTTGATAATTTGGAGAGAAGTTGCTCTATGCCAAGAAATATCTATTCAAAATTACGCAGTTTGGGTCCATTCAAAATTAACTATTCTACTATTTTCAGTGGTGATAAGCGCAGTGATCAGTTGACACATCATCAGAAGAGAGATAGTTGTTTACATGAGACAGCATTAGATGAACTCGGGGTCCAATGTAAGGGGCAATCCAAAGTCAGAGTGCCAGATTTGAGTCAAAAGGACACGCCAAATGGCTTTACTAGACCATATATTGGGGAATCAGTAGATTCTGTAAACGGTCCAGCAGCTTGTGTCGTTCCTGCGCTCCATTGCATTCTGCAACAAAATGCCATGCAAATGGAAGAAACAATGAGATTGATTGAAGTTGTTGATCAAATCACAGGCAATCACGCAGAGCTCGCAGAGGCAGTATCAAATAAAAAGCAGATGCAGTTGTCTTTAGCTTCTGCAAGGGAGAGAGTCCTAGAAGCTCATGTGATTTCTATTGAAAATAGGATTGAGAAACTAGTTGTCGAGTTGCAGATACAAAAGATGAAAAATACCAAGCTGGAGAGACAACTGAGAGAAGTTGACAAGAAGTAG

Protein Analysis

610

Amino Acids

69.27

Weight (kDa)

7.88

Isoelectric Point (pI)

40.14

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 17 - 278 4.3e-62 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 18 - 274 1.2e-47 Protein tyrosine and serine/threonine kinase
Kinase-like PF14531 114 - 221 1.3e-06 Kinase-like
Pkinase_fungal PF17667 116 - 201 3.7e-07 Fungal protein kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 1499
AciI CCGC 2 cut(s) 288, 1163
AclWI GGATC 5 cut(s) 219, 779, 792, 1007, 1103
AcoI YGGCCR 1 cut(s) 285
AcsI RAATTY 4 cut(s) 6, 854, 1012, 1175
AfaI GTAC 3 cut(s) 59, 95, 192
AfiI CCNNNNNNNGG 2 cut(s) 1426, 1499
AhdI GACNNNNNGTC 1 cut(s) 607
AhlI ACTAGT 1 cut(s) 1753
AjnI CCWGG 2 cut(s) 254, 709
AloI GAACNNNNNNTCC 2 cut(s) 1401, 1433
Alw21I GWGCWC 2 cut(s) 103, 1647
Alw26I GTCTC 3 cut(s) 1129, 1388, 1795
AlwI GGATC 5 cut(s) 219, 779, 792, 1007, 1103
Ama87I CYCGRG 2 cut(s) 149, 1412
AoxI GGCC 3 cut(s) 285, 712, 880
ApeKI GCWGC 4 cut(s) 571, 767, 1043, 1532
ApoI RAATTY 4 cut(s) 6, 854, 1012, 1175
AseI ATTAAT 1 cut(s) 444
AspLEI GCGC 3 cut(s) 706, 1347, 1552
AspS9I GGNCC 3 cut(s) 1301, 1417, 1526
AsuHPI GGTGA 4 cut(s) 908, 974, 1124, 1349
AvaI CYCGRG 2 cut(s) 149, 1412
AvaII GGWCC 3 cut(s) 1301, 1417, 1526
BamHI GGATCC 1 cut(s) 784
BanII GRGCYC 2 cut(s) 103, 1647
BbsI GAAGAC 1 cut(s) 293
Bbv12I GWGCWC 2 cut(s) 103, 1647
BbvI GCAGC 4 cut(s) 583, 754, 1030, 1544
BccI CCATC 4 cut(s) 140, 547, 872, 1058
BciT130I CCWGG 2 cut(s) 256, 711
BciVI GTATCC 2 cut(s) 578, 675
BclI TGATCA 3 cut(s) 319, 1351, 1618
BcoDI GTCTC 3 cut(s) 1129, 1388, 1795
BcuI ACTAGT 1 cut(s) 1753
BfaI CTAG 5 cut(s) 629, 1022, 1488, 1712, 1754
BfmI CTRYAG 2 cut(s) 515, 804
BfuI GTATCC 2 cut(s) 578, 675
BisI GCNGC 5 cut(s) 288, 572, 768, 1044, 1533
BlsI GCNGC 5 cut(s) 289, 573, 769, 1045, 1534
Bme1390I CCNGG 2 cut(s) 256, 711
Bme18I GGWCC 3 cut(s) 1301, 1417, 1526
BmeRI GACNNNNNGTC 1 cut(s) 607
BmeT110I CYCGRG 2 cut(s) 149, 1412
BmgT120I GGNCC 3 cut(s) 1301, 1417, 1526
BmiI GGNNCC 5 cut(s) 295, 558, 786, 1302, 1418
BmrFI CCNGG 2 cut(s) 256, 711
BmsI GCATC 4 cut(s) 117, 1077, 1150, 1665
BoxI GACNNNNGTC 1 cut(s) 517
BpiI GAAGAC 1 cut(s) 293
BpmI CTGGAG 2 cut(s) 543, 1817
Bsa29I ATCGAT 1 cut(s) 901
BsaAI YACGTR 1 cut(s) 957
BsaJI CCNNGG 2 cut(s) 400, 892
Bsc4I CCNNNNNNNGG 2 cut(s) 1426, 1499
Bse118I RCCGGY 1 cut(s) 290
Bse3DI GCAATG 1 cut(s) 1555
BseBI CCWGG 2 cut(s) 256, 711
BseCI ATCGAT 1 cut(s) 901
BseDI CCNNGG 2 cut(s) 400, 892
BseGI GGATG 5 cut(s) 108, 214, 322, 558, 1063
BseLI CCNNNNNNNGG 2 cut(s) 1426, 1499
BseMI GCAATG 1 cut(s) 1555
BseMII CTCAG 2 cut(s) 1140, 1799
BseXI GCAGC 4 cut(s) 583, 754, 1030, 1544
BshFI GGCC 3 cut(s) 287, 714, 882
BshVI ATCGAT 1 cut(s) 901
BsiHKAI GWGCWC 2 cut(s) 103, 1647
BsiHKCI CYCGRG 2 cut(s) 149, 1412
BsiSI CCGG 1 cut(s) 291
BslFI GGGAC 2 cut(s) 743, 873
BslI CCNNNNNNNGG 2 cut(s) 1426, 1499
BsmAI GTCTC 3 cut(s) 1129, 1388, 1795
BsmFI GGGAC 2 cut(s) 743, 873
BsmI GAATGC 1 cut(s) 1560
BsnI GGCC 3 cut(s) 287, 714, 882
BsoBI CYCGRG 2 cut(s) 149, 1412
Bsp1286I GDGCHC 2 cut(s) 103, 1647
Bsp1407I TGTACA 1 cut(s) 93
Bsp19I CCATGG 1 cut(s) 400
BspACI CCGC 2 cut(s) 288, 1163
BspANI GGCC 3 cut(s) 287, 714, 882
BspCNI CTCAG 2 cut(s) 1139, 1800
BspDI ATCGAT 1 cut(s) 901
BspLI GGNNCC 5 cut(s) 295, 558, 786, 1302, 1418
BspMAI CTGCAG 2 cut(s) 519, 808
BspPI GGATC 5 cut(s) 219, 779, 792, 1007, 1103
BspQI GCTCTTC 1 cut(s) 333
BsrDI GCAATG 1 cut(s) 1555
BsrFI RCCGGY 1 cut(s) 290
BsrGI TGTACA 1 cut(s) 93
BssAI RCCGGY 1 cut(s) 290
BssECI CCNNGG 2 cut(s) 400, 892
BssT1I CCWWGG 2 cut(s) 400, 892
Bst2UI CCWGG 2 cut(s) 256, 711
Bst4CI ACNGT 3 cut(s) 91, 827, 1526
Bst6I CTCTTC 2 cut(s) 333, 1367
BstAPI GCANNNNNTGC 1 cut(s) 577
BstAUI TGTACA 1 cut(s) 93
BstBAI YACGTR 1 cut(s) 957
BstC8I GCNNGC 3 cut(s) 772, 840, 1647
BstDEI CTNAG 3 cut(s) 775, 1126, 1808
BstDSI CCRYGG 1 cut(s) 400
BstF5I GGATG 5 cut(s) 108, 214, 322, 558, 1063
BstHHI GCGC 3 cut(s) 706, 1347, 1552
BstMAI GTCTC 3 cut(s) 1129, 1388, 1795
BstMWI GCNNNNNNNGC 3 cut(s) 577, 820, 1646
BstNI CCWGG 2 cut(s) 256, 711
BstNSI RCATGY 1 cut(s) 842
BstPAI GACNNNNGTC 1 cut(s) 517
BstSCI CCNGG 2 cut(s) 254, 709
BstSFI CTRYAG 2 cut(s) 515, 804
BstSNI TACGTA 1 cut(s) 957
BstV1I GCAGC 4 cut(s) 583, 754, 1030, 1544
BstV2I GAAGAC 1 cut(s) 293
BstX2I RGATCY 2 cut(s) 784, 1095
BstXI CCANNNNNNTGG 1 cut(s) 1585
BstYI RGATCY 2 cut(s) 784, 1095
Bsu15I ATCGAT 1 cut(s) 901
BsuI GTATCC 2 cut(s) 578, 675
BsuRI GGCC 3 cut(s) 287, 714, 882
BsuTUI ATCGAT 1 cut(s) 901
BtgI CCRYGG 1 cut(s) 400
BtgZI GCGATG 1 cut(s) 1054
BtsCI GGATG 5 cut(s) 108, 214, 322, 558, 1063
BtsI GCAGTG 3 cut(s) 235, 246, 1354
BtsIMutI CAGTG 6 cut(s) 87, 235, 246, 1009, 1339, 1354
Cac8I GCNNGC 3 cut(s) 772, 840, 1647
CfoI GCGC 3 cut(s) 706, 1347, 1552
Cfr10I RCCGGY 1 cut(s) 290
Cfr13I GGNCC 3 cut(s) 1301, 1417, 1526
ClaI ATCGAT 1 cut(s) 901
CseI GACGC 1 cut(s) 785
Csp6I GTAC 3 cut(s) 58, 94, 191
CviQI GTAC 3 cut(s) 58, 94, 191
DdeI CTNAG 3 cut(s) 775, 1126, 1808
DraI TTTAAA 1 cut(s) 754
DriI GACNNNNNGTC 1 cut(s) 607
EaeI YGGCCR 1 cut(s) 285
Eam1104I CTCTTC 2 cut(s) 333, 1367
Eam1105I GACNNNNNGTC 1 cut(s) 607
EarI CTCTTC 2 cut(s) 333, 1367
Ecl136II GAGCTC 2 cut(s) 101, 1645
Eco105I TACGTA 1 cut(s) 957
Eco130I CCWWGG 2 cut(s) 400, 892
Eco24I GRGCYC 2 cut(s) 103, 1647
Eco47I GGWCC 3 cut(s) 1301, 1417, 1526
Eco53kI GAGCTC 2 cut(s) 101, 1645
Eco88I CYCGRG 2 cut(s) 149, 1412
EcoICRI GAGCTC 2 cut(s) 101, 1645
EcoRII CCWGG 2 cut(s) 254, 709
EcoT14I CCWWGG 2 cut(s) 400, 892
EcoT38I GRGCYC 2 cut(s) 103, 1647
ErhI CCWWGG 2 cut(s) 400, 892
FalI AAGNNNNNCTT 2 cut(s) 11, 43
FaqI GGGAC 2 cut(s) 743, 873
FbaI TGATCA 3 cut(s) 319, 1351, 1618
Fnu4HI GCNGC 5 cut(s) 288, 572, 768, 1044, 1533
FokI GGATG 5 cut(s) 95, 201, 309, 565, 1070
FriOI GRGCYC 2 cut(s) 103, 1647
Fsp4HI GCNGC 5 cut(s) 288, 572, 768, 1044, 1533
FspBI CTAG 5 cut(s) 629, 1022, 1488, 1712, 1754
GlaI GCGC 3 cut(s) 705, 1346, 1551
GluI GCNGC 5 cut(s) 288, 572, 768, 1044, 1533
GsuI CTGGAG 2 cut(s) 543, 1817
HaeIII GGCC 3 cut(s) 287, 714, 882
HapII CCGG 1 cut(s) 291
HgaI GACGC 1 cut(s) 785
HhaI GCGC 3 cut(s) 706, 1347, 1552
Hin6I GCGC 3 cut(s) 704, 1345, 1550
HinP1I GCGC 3 cut(s) 704, 1345, 1550
HincII GTYRAC 3 cut(s) 1192, 1359, 1819
HindII GTYRAC 3 cut(s) 1192, 1359, 1819
HindIII AAGCTT 1 cut(s) 812
HinfI GANTC 9 cut(s) 37, 178, 259, 500, 1193, 1459, 1505, 1514, 1707
HpaII CCGG 1 cut(s) 291
HphI GGTGA 4 cut(s) 908, 974, 1124, 1349
Hpy166II GTNNAC 6 cut(s) 94, 1192, 1359, 1388, 1522, 1819
Hpy188I TCNGA 5 cut(s) 319, 539, 867, 1371, 1445
Hpy188III TCNNGA 6 cut(s) 151, 560, 875, 1022, 1055, 1088
Hpy8I GTNNAC 6 cut(s) 94, 1192, 1359, 1388, 1522, 1819
Hpy99I CGWCG 1 cut(s) 186
HpyAV CCTTC 1 cut(s) 670
HpyCH4III ACNGT 3 cut(s) 91, 827, 1526
HpyCH4IV ACGT 2 cut(s) 844, 956
HpyF10VI GCNNNNNNNGC 3 cut(s) 577, 820, 1646
HpyF3I CTNAG 3 cut(s) 775, 1126, 1808
HpySE526I ACGT 2 cut(s) 844, 956
HspAI GCGC 3 cut(s) 704, 1345, 1550
Ksp22I TGATCA 3 cut(s) 319, 1351, 1618
LguI GCTCTTC 1 cut(s) 333
LmnI GCTCC 4 cut(s) 455, 562, 655, 1557
Lsp1109I GCAGC 4 cut(s) 583, 754, 1030, 1544
LweI GCATC 4 cut(s) 117, 1077, 1150, 1665
MaeI CTAG 5 cut(s) 629, 1022, 1488, 1712, 1754
MaeII ACGT 2 cut(s) 844, 956
MaeIII GTNAC 1 cut(s) 962
MboII GAAGA 8 cut(s) 34, 74, 293, 350, 823, 1193, 1384, 1601
MfeI CAATTG 1 cut(s) 575
MflI RGATCY 2 cut(s) 784, 1095
MhlI GDGCHC 2 cut(s) 103, 1647
MlyI GAGTC 4 cut(s) 268, 1187, 1468, 1716
MmeI TCCRAC 1 cut(s) 517
MnlI CCTC 8 cut(s) 158, 717, 919, 943, 989, 1018, 1200, 1645
MseI TTAA 8 cut(s) 312, 423, 444, 462, 753, 1031, 1139, 1314
MslI CAYNNNNRTG 6 cut(s) 327, 399, 417, 645, 1110, 1583
MspI CCGG 1 cut(s) 291
MspR9I CCNGG 2 cut(s) 256, 711
MunI CAATTG 1 cut(s) 575
Mva1269I GAATGC 1 cut(s) 1560
MvaI CCWGG 2 cut(s) 256, 711
MwoI GCNNNNNNNGC 3 cut(s) 577, 820, 1646
NcoI CCATGG 1 cut(s) 400
NlaIV GGNNCC 5 cut(s) 295, 558, 786, 1302, 1418
NmuCI GTSAC 1 cut(s) 962
NspI RCATGY 1 cut(s) 842
PaeI GCATGC 1 cut(s) 842
PaeR7I CTCGAG 1 cut(s) 149
PciSI GCTCTTC 1 cut(s) 333
PctI GAATGC 1 cut(s) 1560
PfeI GAWTC 5 cut(s) 37, 178, 500, 1505, 1514
PflMI CCANNNNNTGG 1 cut(s) 1499
PkrI GCNGC 5 cut(s) 289, 573, 769, 1045, 1534
PleI GAGTC 4 cut(s) 267, 1187, 1467, 1715
PpsI GAGTC 4 cut(s) 267, 1187, 1467, 1715
Ppu21I YACGTR 1 cut(s) 957
PshAI GACNNNNGTC 1 cut(s) 517
PshBI ATTAAT 1 cut(s) 444
Psp124BI GAGCTC 2 cut(s) 103, 1647
Psp6I CCWGG 2 cut(s) 254, 709
PspGI CCWGG 2 cut(s) 254, 709
PspN4I GGNNCC 5 cut(s) 295, 558, 786, 1302, 1418
PspPI GGNCC 3 cut(s) 1301, 1417, 1526
PstI CTGCAG 2 cut(s) 519, 808
PsuI RGATCY 2 cut(s) 784, 1095
RsaI GTAC 3 cut(s) 59, 95, 192
RsaNI GTAC 3 cut(s) 58, 94, 191
RseI CAYNNNNRTG 6 cut(s) 327, 399, 417, 645, 1110, 1583
SacI GAGCTC 2 cut(s) 103, 1647
SapI GCTCTTC 1 cut(s) 333
SaqAI TTAA 8 cut(s) 312, 423, 444, 462, 753, 1031, 1139, 1314
SatI GCNGC 5 cut(s) 288, 572, 768, 1044, 1533
Sau96I GGNCC 3 cut(s) 1301, 1417, 1526
SchI GAGTC 4 cut(s) 268, 1187, 1468, 1716
ScrFI CCNGG 2 cut(s) 256, 711
SduI GDGCHC 2 cut(s) 103, 1647
SfaNI GCATC 4 cut(s) 117, 1077, 1150, 1665
SfcI CTRYAG 2 cut(s) 515, 804
Sfr274I CTCGAG 1 cut(s) 149
SinI GGWCC 3 cut(s) 1301, 1417, 1526
SlaI CTCGAG 1 cut(s) 149
SmiMI CAYNNNNRTG 6 cut(s) 327, 399, 417, 645, 1110, 1583
SmlI CTYRAG 1 cut(s) 149
SmoI CTYRAG 1 cut(s) 149
SnaBI TACGTA 1 cut(s) 957
SpeI ACTAGT 1 cut(s) 1753
SphI GCATGC 1 cut(s) 842
SsiI CCGC 2 cut(s) 288, 1163
SspMI CTAG 5 cut(s) 629, 1022, 1488, 1712, 1754
SstI GAGCTC 2 cut(s) 103, 1647
StyD4I CCNGG 2 cut(s) 254, 709
StyI CCWWGG 2 cut(s) 400, 892
TaaI ACNGT 3 cut(s) 91, 827, 1526
TaiI ACGT 2 cut(s) 847, 959
TaqI TCGA 4 cut(s) 150, 181, 901, 1761
TatI WGTACW 2 cut(s) 93, 190
TauI GCSGC 1 cut(s) 290
TfiI GAWTC 5 cut(s) 37, 178, 500, 1505, 1514
Tru1I TTAA 8 cut(s) 312, 423, 444, 462, 753, 1031, 1139, 1314
Tru9I TTAA 8 cut(s) 312, 423, 444, 462, 753, 1031, 1139, 1314
TscAI CASTG 6 cut(s) 94, 242, 253, 1009, 1339, 1354
TseFI GTSAC 1 cut(s) 962
TseI GCWGC 4 cut(s) 571, 767, 1043, 1532
Tsp45I GTSAC 1 cut(s) 962
TspDTI ATGAA 5 cut(s) 135, 689, 738, 1422, 1796
TspGWI ACGGA 1 cut(s) 21
TspRI CASTG 6 cut(s) 94, 242, 253, 1009, 1339, 1354
Van91I CCANNNNNTGG 1 cut(s) 1499
VpaK11BI GGWCC 3 cut(s) 1301, 1417, 1526
VspI ATTAAT 1 cut(s) 444
XapI RAATTY 4 cut(s) 6, 854, 1012, 1175
XbaI TCTAGA 1 cut(s) 1021
XceI RCATGY 1 cut(s) 842
XhoI CTCGAG 1 cut(s) 149
XspI CTAG 5 cut(s) 629, 1022, 1488, 1712, 1754
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.