Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2C

Orthogroup ID

OG0001835

Physical Location & Seq

Genomic Coordinates Forward (+)

79029771 .. 79038702

Gene Structure 8932 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2CG612900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1923 bp

ATGGAGCAAGTATCAGAGAAAAAATTTCCTTTGGATGCAAAAGAGTATAAGTTATATGAAGAAGTGGGTGAAGGTGTTAGTGCTAGTGTGTACAGAGCACTCTGCGTACCACTTAATGAGATAGTTGCTATCAAGGTTCTTGATCTGGAAAAATGCAATAATGACCTGGATGGTATCCGACGGGAGGTACATACAATGACTTTGATCAATCATCCAAATCTATTACGAGCACATTGTTCGTTCACAGCTGGCCACAGCCTTTGGGTTGTCATGCCATATATGGCTGGGGGGTCCTGCCTTCATATAATGAAGACTTCGTTTCCTGAAGGTTTTGAAGAGCCTGTTATTGCAACTCTATTGCATGAGGTCCTCAAAGCTCTTGTTTATCTTCATGCTCATGGCCATATCCATAGAGATGTGAAGGCTGGGAATATATTGATCGATTCTAATGGTGCAGTCAAGTTAGCTGACTTTGGTGTATCTGCATGCATGTTTGATACTGGAGATAGACAACGTTCCAGAAATACTTTTGTTGGAACTCCTTGCTGGATGGCTCCTGAAGTTATGCAGCAATTGCATGGATATGACTTCAAAGCAGACATCTGGTCATTTGGAATAACAGCACTCGAACTTGCCCATGGACATGCCCCATTTTCCAAGTACCCACCAATGAAAGTTTTGCTGATGACTTTACAAAATGCACCGCCAGGCCTTGATTATGAAAGAGACAAAAGATTTTCTAAGTCTTTCAAAGAGCTGGTAGCTGCTTGCTTAGTGAAGGATCCAAAGAAACGTCCCACTTCTGAAAAGCTTTTGAAGCACCATTTTTTCAAACATGCACGACCAGTTGATTATCTATCTCGTACCATCCTTGATGGCCTCTCTCCATTAGGAGATCGTTTTAGGATTCTGAAGGCAAAAGAAGCTGATCTTCTTGTGCAGAATAAGGCTCTCTATGGGGATAAGGAACATTTGTCGCAGCAAGAGTATATCCGAGGAATCAGTGCCTGGAATTTCAACCTTGAAGATTTAAAAAATCAGGCTGCCCTTATTCAGGATCATGGCACGCCACATGAAGGGAGTAAGGAGCAAAGTGACAGCTATGAAGATGTTAATTTTCCAACTGAGAGGTCGACGGTTGAAATGGCAAACCAGTCAAATGCTGCATCTAATCAGGAGGATGGCTTTGACGAGCTTCATGATTTGGACGGCTCACTTGCTTCATTTCCTATTAAACCTCTTCAAGCACTCAAAGGCTGTTTTGATGTTTGTGAGGAGGATGCGAGTGCGACTAGTCCTACAACCATTATTCAAGAAAATGGAAGAAGTGGGGGTGAGACTTCAGGGAAAAGTAGTTCTTTATCACGTCATGACATCCCTGAGCCTAAGAAGTTCATGAGTGGTTCATTACTCCCGGATAATGTGCTTTCTTCTAAAAAGGTTATTGGTGAAGGGGAGAGGGATCATCTACAATCAAAACATCAACCTGAACGGAACTATAGTGGTCCATTGTTGTATCGTCAAAAGAGAGATGCCAATAACCCTACATCTGCTGAGGATATGTCTGAAGGAGCAGTTGTGCAGCGTAAGGGGCGCTTCAAGGTCACTTCAGCAGACCTCAGTCCTAAGGGTTCTTCAAATAGCTTCTTTAGTCCTGTTTCTCTAGGTTCAAGTAGTCCACCATCCTCAAATGTTACAGCTGCCACTGTTCTCCCATCACTACAATGCATGCTGCTGCAAAACACCTCGCAAAGGGAGGAAATAGTAAAATTGATCAAATATGTTGAACAGACCTCTGGTATGCAAGGAGAGATAACCGATGTAAGCACCAGTGACCTTTCGCAGGTAAAGGCCACCCCTCTTATGTATACAACGCAATTACTGACCTTTTTAAGTTGGGTTGAATATTCCCCTTTAAGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001932 GO:0001934 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0007154 GO:0007165 GO:0007346 GO:0008150 GO:0008152 GO:0009893 GO:0009987 GO:0010562 GO:0010604 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019220 GO:0019222 GO:0019538 GO:0023014 GO:0023052 GO:0031098 GO:0031323 GO:0031325 GO:0031399 GO:0031401 GO:0032147 GO:0032268 GO:0032270 GO:0033554 GO:0033674 GO:0035556 GO:0036211 GO:0042325 GO:0042327 GO:0043085 GO:0043170 GO:0043412 GO:0043549 GO:0044093 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0045859 GO:0045860 GO:0045937 GO:0048518 GO:0048522 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051174 GO:0051246 GO:0051247 GO:0051338 GO:0051347 GO:0051716 GO:0051726 GO:0060255 GO:0065007 GO:0065009 GO:0071704 GO:0080090 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase

Protein Analysis

640

Amino Acids

70.99

Weight (kDa)

6.04

Isoelectric Point (pI)

45.33

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	16 - 277	3.1e-60	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	17 - 273	1.6e-44	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001835)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G14720 AT5G14720
fragaria_vesca	FvH4_4g34360 FvH4_4g34360 FvH4_6g50820 FvH4_6g50820 FvH4_6g50820 FvH4_6g50820 FvH4_6g50820
malus_domestica	MD09G1031900.v1.1 MD09G1032000.v1.1 MD16G1093600.v1.1 MD17G1033700.v1.1
prunus_persica	Prupe.1G252900_v2.0.a1 Prupe.1G252900_v2.0.a1 Prupe.1G252900_v2.0.a1 Prupe.1G252900_v2.0.a1 Prupe.1G252900_v2.0.a1 Prupe.3G286000_v2.0.a1 Prupe.3G286000_v2.0.a1 Prupe.3G286000_v2.0.a1 Prupe.3G286000_v2.0.a1
pyrus_communis	pycom111g02520 pycom16g07960 pycom17g03080
rosa_chinensis	RchiOBHm_Chr2g0172211 RchiOBHm_Chr4g0443771
rosa_laevigata	RLG00000005891 RLG00000022093
rosa_multiflora	Rmu_co8491651.1_g000001 Rmu_ssc0000252.1_g000052
rosa_roxburghii	Rroxscaffold_2G00080080 Rroxscaffold_5G00384340
rosa_rugosa	Rorug02G0557300 Rorug02G0557400 Rorug04G0347100
rosa_samantha	Rh2AG632700 Rh2BG646300 Rh2CG612900 Rh2DG653800 Rh2DG660900 Rh4AG407400 Rh4BG418300 Rh4CG432400 Rh4DG413600
rosa_wichuraiana	Rw2G052380 Rw4G034990

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1834
AccI	GTMKAC	2 cut(s)	1133, 1868
AciI	CCGC	1 cut(s)	704
AclI	AACGTT	1 cut(s)	514
AclWI	GGATC	4 cut(s)	776, 789, 1065, 1470
AcoI	YGGCCR	2 cut(s)	250, 400
AcsI	RAATTY	2 cut(s)	23, 1012
AcuI	CTGAAG	6 cut(s)	345, 579, 932, 1326, 1587, 1593
AfaI	GTAC	5 cut(s)	92, 108, 189, 662, 865
AfiI	CCNNNNNNNGG	5 cut(s)	184, 1054, 1076, 1752, 1843
AhdI	GACNNNNNGTC	1 cut(s)	604
AhlI	ACTAGT	1 cut(s)	1292
AjiI	CACGTC	1 cut(s)	1367
AjnI	CCWGG	3 cut(s)	165, 706, 1007
AloI	GAACNNNNNNTCC	2 cut(s)	1339, 1371
Alw21I	GWGCWC	2 cut(s)	100, 232
Alw26I	GTCTC	2 cut(s)	720, 1331
AlwI	GGATC	4 cut(s)	776, 789, 1065, 1470
AlwNI	CAGNNNCTG	1 cut(s)	1008
AoxI	GGCC	5 cut(s)	250, 400, 709, 877, 1851
ApeKI	GCWGC	9 cut(s)	568, 764, 979, 1043, 1163, 1582, 1700, 1732, 1735
ApoI	RAATTY	2 cut(s)	23, 1012
AspLEI	GCGC	1 cut(s)	1596
AspS9I	GGNCC	3 cut(s)	291, 367, 1505
AsuC2I	CCSGG	1 cut(s)	1415
AsuHPI	GGTGA	3 cut(s)	80, 1346, 1460
AvaII	GGWCC	3 cut(s)	291, 367, 1505
AxyI	CCTNAGG	1 cut(s)	1626
BalI	TGGCCA	2 cut(s)	252, 402
BamHI	GGATCC	1 cut(s)	781
BbsI	GAAGAC	1 cut(s)	317
Bbv12I	GWGCWC	2 cut(s)	100, 232
BbvCI	CCTCAGC	1 cut(s)	1554
BbvI	GCAGC	9 cut(s)	580, 751, 991, 1030, 1150, 1594, 1687, 1719, 1722
BccI	CCATC	7 cut(s)	164, 544, 869, 875, 1175, 1690, 1723
BceAI	ACGGC	1 cut(s)	1225
BcgI	CGANNNNNNTGC	2 cut(s)	219, 253
BciT130I	CCWGG	3 cut(s)	167, 708, 1009
BciVI	GTATCC	1 cut(s)	185
BclI	TGATCA	2 cut(s)	204, 1773
BcnI	CCSGG	1 cut(s)	1415
BcoDI	GTCTC	2 cut(s)	720, 1331
BcuI	ACTAGT	1 cut(s)	1292
BfaI	CTAG	3 cut(s)	84, 1293, 1664
BfmI	CTRYAG	1 cut(s)	1498
BfoI	RGCGCY	1 cut(s)	1597
BfuAI	ACCTGC	1 cut(s)	1834
BfuI	GTATCC	1 cut(s)	185
BisI	GCNGC	9 cut(s)	569, 765, 980, 1044, 1164, 1583, 1701, 1733, 1736
BlsI	GCNGC	9 cut(s)	570, 766, 981, 1045, 1165, 1584, 1702, 1734, 1737
Bme1390I	CCNGG	4 cut(s)	167, 708, 1009, 1415
Bme18I	GGWCC	3 cut(s)	291, 367, 1505
BmeRI	GACNNNNNGTC	1 cut(s)	604
BmgBI	CACGTC	1 cut(s)	1367
BmgT120I	GGNCC	3 cut(s)	291, 367, 1505
BmiI	GGNNCC	3 cut(s)	292, 555, 783
BmrFI	CCNGG	4 cut(s)	167, 708, 1009, 1415
BmsI	GCATC	4 cut(s)	25, 1175, 1270, 1522
BoxI	GACNNNNGTC	1 cut(s)	1620
BpiI	GAAGAC	1 cut(s)	317
BpmI	CTGGAG	1 cut(s)	522
Bpu10I	CCTNAGC	2 cut(s)	1380, 1554
BpuMI	CCSGG	1 cut(s)	1415
Bsa29I	ATCGAT	1 cut(s)	441
BsaJI	CCNNGG	2 cut(s)	637, 994
BsaXI	ACNNNNNCTCC	2 cut(s)	1563, 1593
Bsc4I	CCNNNNNNNGG	5 cut(s)	184, 1054, 1076, 1752, 1843
Bse1I	ACTGG	4 cut(s)	505, 845, 1153, 1830
Bse21I	CCTNAGG	1 cut(s)	1626
BseBI	CCWGG	3 cut(s)	167, 708, 1009
BseCI	ATCGAT	1 cut(s)	441
BseDI	CCNNGG	2 cut(s)	637, 994
BseGI	GGATG	9 cut(s)	40, 175, 211, 555, 867, 1186, 1285, 1374, 1682
BseLI	CCNNNNNNNGG	5 cut(s)	184, 1054, 1076, 1752, 1843
BseMII	CTCAG	4 cut(s)	1116, 1371, 1545, 1633
BseNI	ACTGG	4 cut(s)	505, 845, 1153, 1830
BseRI	GAGGAG	1 cut(s)	1289
BseXI	GCAGC	9 cut(s)	580, 751, 991, 1030, 1150, 1594, 1687, 1719, 1722
BseYI	CCCAGC	2 cut(s)	284, 425
BsgI	GTGCAG	3 cut(s)	474, 959, 1601
BshFI	GGCC	5 cut(s)	252, 402, 711, 879, 1853
BshVI	ATCGAT	1 cut(s)	441
BsiHKAI	GWGCWC	2 cut(s)	100, 232
BsiSI	CCGG	1 cut(s)	1415
BslFI	GGGAC	1 cut(s)	780
BslI	CCNNNNNNNGG	5 cut(s)	184, 1054, 1076, 1752, 1843
BsmAI	GTCTC	2 cut(s)	720, 1331
BsmFI	GGGAC	1 cut(s)	780
BsnI	GGCC	5 cut(s)	252, 402, 711, 879, 1853
Bsp1286I	GDGCHC	2 cut(s)	100, 232
Bsp1407I	TGTACA	1 cut(s)	90
Bsp143I	GATC	9 cut(s)	142, 204, 438, 781, 895, 928, 1057, 1462, 1773
Bsp19I	CCATGG	1 cut(s)	637
BspACI	CCGC	1 cut(s)	704
BspANI	GGCC	5 cut(s)	252, 402, 711, 879, 1853
BspCNI	CTCAG	4 cut(s)	1117, 1372, 1546, 1632
BspDI	ATCGAT	1 cut(s)	441
BspHI	TCATGA	3 cut(s)	1198, 1369, 1395
BspLI	GGNNCC	3 cut(s)	292, 555, 783
BspMI	ACCTGC	1 cut(s)	1834
BspPI	GGATC	4 cut(s)	776, 789, 1065, 1470
BspQI	GCTCTTC	1 cut(s)	330
BsrGI	TGTACA	1 cut(s)	90
BsrI	ACTGG	4 cut(s)	505, 845, 1153, 1830
BssECI	CCNNGG	2 cut(s)	637, 994
BssMI	GATC	9 cut(s)	142, 204, 438, 781, 895, 928, 1057, 1462, 1773
BssNAI	GTATAC	1 cut(s)	1869
BssT1I	CCWWGG	1 cut(s)	637
Bst1107I	GTATAC	1 cut(s)	1869
Bst2UI	CCWGG	3 cut(s)	167, 708, 1009
Bst4CI	ACNGT	2 cut(s)	1138, 1708
Bst6I	CTCTTC	2 cut(s)	330, 1245
BstAPI	GCANNNNNTGC	1 cut(s)	574
BstAUI	TGTACA	1 cut(s)	90
BstC8I	GCNNGC	5 cut(s)	250, 487, 769, 1067, 1730
BstDEI	CTNAG	8 cut(s)	741, 772, 1125, 1380, 1386, 1554, 1619, 1626
BstDSI	CCRYGG	1 cut(s)	637
BstENI	CCTNNNNNAGG	3 cut(s)	1052, 1750, 1841
BstF5I	GGATG	9 cut(s)	40, 175, 211, 555, 867, 1186, 1285, 1374, 1682
BstH2I	RGCGCY	1 cut(s)	1597
BstHHI	GCGC	1 cut(s)	1596
BstKTI	GATC	9 cut(s)	145, 207, 441, 784, 898, 931, 1060, 1465, 1776
BstMAI	GTCTC	2 cut(s)	720, 1331
BstMBI	GATC	9 cut(s)	142, 204, 438, 781, 895, 928, 1057, 1462, 1773
BstMWI	GCNNNNNNNGC	4 cut(s)	574, 817, 923, 1591
BstNI	CCWGG	3 cut(s)	167, 708, 1009
BstNSI	RCATGY	5 cut(s)	489, 493, 647, 839, 1732
BstPAI	GACNNNNGTC	1 cut(s)	1620
BstSCI	CCNGG	4 cut(s)	165, 706, 1007, 1413
BstSFI	CTRYAG	1 cut(s)	1498
BstV1I	GCAGC	9 cut(s)	580, 751, 991, 1030, 1150, 1594, 1687, 1719, 1722
BstV2I	GAAGAC	1 cut(s)	317
BstX2I	RGATCY	1 cut(s)	781
BstYI	RGATCY	1 cut(s)	781
BstZ17I	GTATAC	1 cut(s)	1869
Bsu15I	ATCGAT	1 cut(s)	441
Bsu36I	CCTNAGG	1 cut(s)	1626
BsuI	GTATCC	1 cut(s)	185
BsuRI	GGCC	5 cut(s)	252, 402, 711, 879, 1853
BsuTUI	ATCGAT	1 cut(s)	441
BtgI	CCRYGG	1 cut(s)	637
BtrI	CACGTC	1 cut(s)	1367
BtsCI	GGATG	9 cut(s)	40, 175, 211, 555, 867, 1186, 1285, 1374, 1682
BtsIMutI	CAGTG	3 cut(s)	1009, 1704, 1837
BveI	ACCTGC	1 cut(s)	1834
Cac8I	GCNNGC	5 cut(s)	250, 487, 769, 1067, 1730
CaiI	CAGNNNCTG	1 cut(s)	1008
CciI	TCATGA	3 cut(s)	1198, 1369, 1395
CfoI	GCGC	1 cut(s)	1596
Cfr13I	GGNCC	3 cut(s)	291, 367, 1505
ClaI	ATCGAT	1 cut(s)	441
Csp6I	GTAC	5 cut(s)	91, 107, 188, 661, 864
CspCI	CAANNNNNGTGG	2 cut(s)	242, 277
CviQI	GTAC	5 cut(s)	91, 107, 188, 661, 864
DdeI	CTNAG	8 cut(s)	741, 772, 1125, 1380, 1386, 1554, 1619, 1626
DpnI	GATC	9 cut(s)	144, 206, 440, 783, 897, 930, 1059, 1464, 1775
DpnII	GATC	9 cut(s)	142, 204, 438, 781, 895, 928, 1057, 1462, 1773
DraI	TTTAAA	1 cut(s)	1032
DriI	GACNNNNNGTC	1 cut(s)	604
EaeI	YGGCCR	2 cut(s)	250, 400
Eam1104I	CTCTTC	2 cut(s)	330, 1245
Eam1105I	GACNNNNNGTC	1 cut(s)	604
EarI	CTCTTC	2 cut(s)	330, 1245
Eco130I	CCWWGG	1 cut(s)	637
Eco147I	AGGCCT	1 cut(s)	711
Eco47I	GGWCC	3 cut(s)	291, 367, 1505
Eco57I	CTGAAG	6 cut(s)	345, 579, 932, 1326, 1587, 1593
Eco81I	CCTNAGG	1 cut(s)	1626
EcoNI	CCTNNNNNAGG	3 cut(s)	1052, 1750, 1841
EcoO109I	RGGNCCY	2 cut(s)	291, 367
EcoRII	CCWGG	3 cut(s)	165, 706, 1007
EcoT14I	CCWWGG	1 cut(s)	637
EcoT22I	ATGCAT	2 cut(s)	491, 1730
ErhI	CCWWGG	1 cut(s)	637
FalI	AAGNNNNNCTT	6 cut(s)	915, 947, 1342, 1374, 1580, 1612
FaqI	GGGAC	1 cut(s)	780
FbaI	TGATCA	2 cut(s)	204, 1773
FblI	GTMKAC	2 cut(s)	1133, 1868
Fnu4HI	GCNGC	9 cut(s)	569, 765, 980, 1044, 1164, 1583, 1701, 1733, 1736
FokI	GGATG	9 cut(s)	47, 182, 198, 562, 854, 1193, 1292, 1361, 1669
Fsp4HI	GCNGC	9 cut(s)	569, 765, 980, 1044, 1164, 1583, 1701, 1733, 1736
FspBI	CTAG	3 cut(s)	84, 1293, 1664
GlaI	GCGC	1 cut(s)	1595
GluI	GCNGC	9 cut(s)	569, 765, 980, 1044, 1164, 1583, 1701, 1733, 1736
GsaI	CCCAGC	2 cut(s)	288, 429
GsuI	CTGGAG	1 cut(s)	522
HaeII	RGCGCY	1 cut(s)	1597
HaeIII	GGCC	5 cut(s)	252, 402, 711, 879, 1853
HapII	CCGG	1 cut(s)	1415
HhaI	GCGC	1 cut(s)	1596
Hin6I	GCGC	1 cut(s)	1594
HinP1I	GCGC	1 cut(s)	1594
HincII	GTYRAC	1 cut(s)	1134
HindII	GTYRAC	1 cut(s)	1134
HindIII	AAGCTT	1 cut(s)	809
HinfI	GANTC	3 cut(s)	443, 907, 999
HpaII	CCGG	1 cut(s)	1415
HphI	GGTGA	3 cut(s)	80, 1346, 1460
Hpy166II	GTNNAC	5 cut(s)	91, 243, 1134, 1679, 1869
Hpy188I	TCNGA	6 cut(s)	16, 179, 805, 912, 995, 1567
Hpy8I	GTNNAC	5 cut(s)	91, 243, 1134, 1679, 1869
Hpy99I	CGWCG	2 cut(s)	183, 1138
HpyAV	CCTTC	9 cut(s)	65, 308, 320, 415, 772, 907, 1070, 1445, 1562
HpyCH4III	ACNGT	2 cut(s)	1138, 1708
HpyCH4IV	ACGT	3 cut(s)	514, 793, 1366
HpyF10VI	GCNNNNNNNGC	4 cut(s)	574, 817, 923, 1591
HpyF3I	CTNAG	8 cut(s)	741, 772, 1125, 1380, 1386, 1554, 1619, 1626
HpySE526I	ACGT	3 cut(s)	514, 793, 1366
HspAI	GCGC	1 cut(s)	1594
Ksp22I	TGATCA	2 cut(s)	204, 1773
Kzo9I	GATC	9 cut(s)	142, 204, 438, 781, 895, 928, 1057, 1462, 1773
LguI	GCTCTTC	1 cut(s)	330
LmnI	GCTCC	4 cut(s)	4, 559, 1087, 1571
Lsp1109I	GCAGC	9 cut(s)	580, 751, 991, 1030, 1150, 1594, 1687, 1719, 1722
LweI	GCATC	4 cut(s)	25, 1175, 1270, 1522
MaeI	CTAG	3 cut(s)	84, 1293, 1664
MaeII	ACGT	3 cut(s)	514, 793, 1366
MaeIII	GTNAC	4 cut(s)	1094, 1603, 1693, 1832
MalI	GATC	9 cut(s)	144, 206, 440, 783, 897, 930, 1059, 1464, 1775
MboI	GATC	9 cut(s)	142, 204, 438, 781, 895, 928, 1057, 1462, 1773
MfeI	CAATTG	1 cut(s)	572
MflI	RGATCY	1 cut(s)	781
MhlI	GDGCHC	2 cut(s)	100, 232
MlsI	TGGCCA	2 cut(s)	252, 402
MluCI	AATT	6 cut(s)	23, 572, 1012, 1114, 1769, 1877
MluNI	TGGCCA	2 cut(s)	252, 402
MmeI	TCCRAC	3 cut(s)	202, 514, 1145
Mox20I	TGGCCA	2 cut(s)	252, 402
Mph1103I	ATGCAT	2 cut(s)	491, 1730
MscI	TGGCCA	2 cut(s)	252, 402
MseI	TTAA	6 cut(s)	114, 1031, 1113, 1233, 1892, 1916
MslI	CAYNNNNRTG	5 cut(s)	396, 414, 582, 642, 1723
Msp20I	TGGCCA	2 cut(s)	252, 402
MspA1I	CMGCKG	2 cut(s)	248, 1700
MspI	CCGG	1 cut(s)	1415
MspR9I	CCNGG	4 cut(s)	167, 708, 1009, 1415
MunI	CAATTG	1 cut(s)	572
MvaI	CCWGG	3 cut(s)	167, 708, 1009
MwoI	GCNNNNNNNGC	4 cut(s)	574, 817, 923, 1591
NciI	CCSGG	1 cut(s)	1415
NcoI	CCATGG	1 cut(s)	637
NdeII	GATC	9 cut(s)	142, 204, 438, 781, 895, 928, 1057, 1462, 1773
NlaIV	GGNNCC	3 cut(s)	292, 555, 783
NmuCI	GTSAC	3 cut(s)	1094, 1603, 1832
NsiI	ATGCAT	2 cut(s)	491, 1730
NspI	RCATGY	5 cut(s)	489, 493, 647, 839, 1732
PaeI	GCATGC	2 cut(s)	489, 1732
PagI	TCATGA	3 cut(s)	1198, 1369, 1395
PceI	AGGCCT	1 cut(s)	711
PciSI	GCTCTTC	1 cut(s)	330
PfeI	GAWTC	3 cut(s)	443, 907, 999
PfoI	TCCNGGA	1 cut(s)	1413
PkrI	GCNGC	9 cut(s)	570, 766, 981, 1045, 1165, 1584, 1702, 1734, 1737
PpuMI	RGGWCCY	2 cut(s)	291, 367
PshAI	GACNNNNGTC	1 cut(s)	1620
Psp1406I	AACGTT	1 cut(s)	514
Psp5II	RGGWCCY	2 cut(s)	291, 367
Psp6I	CCWGG	3 cut(s)	165, 706, 1007
PspFI	CCCAGC	2 cut(s)	284, 425
PspGI	CCWGG	3 cut(s)	165, 706, 1007
PspN4I	GGNNCC	3 cut(s)	292, 555, 783
PspPI	GGNCC	3 cut(s)	291, 367, 1505
PspPPI	RGGWCCY	2 cut(s)	291, 367
PstNI	CAGNNNCTG	1 cut(s)	1008
PsuI	RGATCY	1 cut(s)	781
PvuII	CAGCTG	2 cut(s)	248, 1700
RsaI	GTAC	5 cut(s)	92, 108, 189, 662, 865
RsaNI	GTAC	5 cut(s)	91, 107, 188, 661, 864
RseI	CAYNNNNRTG	5 cut(s)	396, 414, 582, 642, 1723
SalI	GTCGAC	1 cut(s)	1132
SapI	GCTCTTC	1 cut(s)	330
SaqAI	TTAA	6 cut(s)	114, 1031, 1113, 1233, 1892, 1916
SatI	GCNGC	9 cut(s)	569, 765, 980, 1044, 1164, 1583, 1701, 1733, 1736
Sau3AI	GATC	9 cut(s)	142, 204, 438, 781, 895, 928, 1057, 1462, 1773
Sau96I	GGNCC	3 cut(s)	291, 367, 1505
ScrFI	CCNGG	4 cut(s)	167, 708, 1009, 1415
SduI	GDGCHC	2 cut(s)	100, 232
SfaNI	GCATC	4 cut(s)	25, 1175, 1270, 1522
SfcI	CTRYAG	1 cut(s)	1498
SinI	GGWCC	3 cut(s)	291, 367, 1505
SmiMI	CAYNNNNRTG	5 cut(s)	396, 414, 582, 642, 1723
SpeI	ACTAGT	1 cut(s)	1292
SphI	GCATGC	2 cut(s)	489, 1732
Sse9I	AATT	6 cut(s)	23, 572, 1012, 1114, 1769, 1877
SseBI	AGGCCT	1 cut(s)	711
SsiI	CCGC	1 cut(s)	704
SspI	AATATT	1 cut(s)	1907
SspMI	CTAG	3 cut(s)	84, 1293, 1664
StuI	AGGCCT	1 cut(s)	711
StyD4I	CCNGG	4 cut(s)	165, 706, 1007, 1413
StyI	CCWWGG	1 cut(s)	637
TaaI	ACNGT	2 cut(s)	1138, 1708
TaiI	ACGT	3 cut(s)	517, 796, 1369
TaqI	TCGA	3 cut(s)	441, 627, 1133
TasI	AATT	6 cut(s)	23, 572, 1012, 1114, 1769, 1877
TatI	WGTACW	1 cut(s)	90
TfiI	GAWTC	3 cut(s)	443, 907, 999
Tru1I	TTAA	6 cut(s)	114, 1031, 1113, 1233, 1892, 1916
Tru9I	TTAA	6 cut(s)	114, 1031, 1113, 1233, 1892, 1916
TscAI	CASTG	3 cut(s)	1009, 1711, 1837
TseFI	GTSAC	3 cut(s)	1094, 1603, 1832
TseI	GCWGC	9 cut(s)	568, 764, 979, 1043, 1163, 1582, 1700, 1732, 1735
Tsp45I	GTSAC	3 cut(s)	1094, 1603, 1832
TspGWI	ACGGA	1 cut(s)	1507
TspRI	CASTG	3 cut(s)	1009, 1711, 1837
VpaK11BI	GGWCC	3 cut(s)	291, 367, 1505
XagI	CCTNNNNNAGG	3 cut(s)	1052, 1750, 1841
XapI	RAATTY	2 cut(s)	23, 1012
XceI	RCATGY	5 cut(s)	489, 493, 647, 839, 1732
XmiI	GTMKAC	2 cut(s)	1133, 1868
XspI	CTAG	3 cut(s)	84, 1293, 1664
Zsp2I	ATGCAT	2 cut(s)	491, 1730

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.