pycom16g07960

Serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr16
Physical Location & Seq
Forward (+)
5270398 .. 5275186
4789 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom16g07960.3

Sequence Viewer

Length: 1812 bp
ATGGAATTTTTACCCAAAAAGGACTTTCCGGTGAACCCAAAAGACTACAAACTGTACGAAGAAGTCGGTCAGGGCGTGAGCGCCACCGTCTACAGAGCTCTCTGCATCCCACTTAATCAAACCGTCGCTATCAAAGTCCTCGACCTTGAGAAATGCAGGAACGACTTGGACGCTATTCGGAGAGAAGTGCAGACCATGATCCTGCTTGACCATCCGAATCTGCTCAAGGCTCACTGCTCTTTCACTGCCGGCAGTAGCCTCTGGATCGTCACGCCTTACATGGCCTCTGGATCGTGTCTTCACATCATGAAATCTGCCCACCCTGATGGTTTTGAGCAGCCCGTTATCGCGACTTTGTTGTATGCGGTTCTCAAAGCCCTTGCTTATCTGCATTGCCATGGACACATTCATAGAGATGTTAAGGCTGGTAATATACTGGTTGATACAAAAGGTGCAGTTAAGTTAGCAGACTTTGGAGTTTCAGCGAGCTTGTTCGACACTGGCCACAGACAACATGCAAGAAAAACGTTTGTTGGAACTCCTTGCTGGATGGCTCCGGAAGTTATGCAGCAATTGCATGGATATGACTTTAAAGCAGACATCTGGTCTTTTGGGATAACAGCACTGGAACTTGCTCATGGTCATGCTCCATTTTCCAAGTACCCACCAATGAAGGTTTTGTTAATGACCTTGCAGAATGCTCCTCCTGGCCTTGACTATGAGAGGGACAAGAAATTTTCAAAGTCATTTAAAGAGATAGTTGCTGCCTGCTTAGTTAAGGATCCAAAGAAGCGTCCTACTGCGGAAAAGCTCTTGAATCACCGTTTCTTCAAACATGTGCATTCAAAGGAGCTTATAGCGGAGTCAATTCTTAATGGTCTTTCTCCCCTTGGAGATCGTTTTAGAATGTTGAAGGAAAAAGAGGCTGAGTTCTTTGCACAAAGTGAGTCTTTTTATGGTGACAAAGACCATTTATCACAGCAAGAGTATATACGAGGGATCAGTGCATGGAATTTTGATGTAGATGATTTGAAAAGACAGGCTGCTATTATTCAAGATGATGATGGCATCACCATTGCTGAAAACCAAGACTGGAGCTGCAAACAGAATGGTGGATTTGGTAAATCAGCTGGTCTAACAGAAAGAGATCCCATTAATGCACATGTGGATAGTTTCAATTGTAGTAGATCGATATGGAAAGATTCTGGCCTTGGGGAAATTGAAGAAATTGCTGATTCATCACCATCAGTGCAAGGAAAAAAGAGTAGCTGTTTTGGCGCTGATTTGGAAAGAATAGTACCTTCCTCAAAAACCGATCATTCCCCTTCTGTCAGTGGTGATGAGGGCAGCGATCACTTGGAACATCATCAGAAGAGAGATGGTAGTTCTTCTTCATATGAGACGGCATCAGATGACCAAGGGTTGCAAGGGCGATTCAATAGCACGGTCCCATATTCCAGTCCTAAGGACACTCCAAACGGCATTATAATCTCTTCTGTAATTGGTACATCCGCTTCCATTATTCCTGCGCTCCATTATATTTTGCAGAAAAACGCCATGCAAAAGGAAGAAACAATGAGATTGATTGAAATTGTAGATCAAATCACTGGAAATCATACAGAGATCACAGAGGCAGTAACCAGTGTCAAGAACTTGCAGATGTGTACGGCTTCTGCAAGAGAGAGAGTCTTAGAATCCCATGTGATTGGTATTCAACAAAGAATTGACAAACTTGTCGAAGAGTTGCAGATACAGAAAACAAGGAATGTCAAGCTGGAGAGGCGATTAAGTGCTTTGGGTGATAAGAAGTAG

Protein Analysis

604

Amino Acids

67.15

Weight (kDa)

6.5

Isoelectric Point (pI)

41.14

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1487
AasI GACNNNNNNGTC 1 cut(s) 1733
AccI GTMKAC 1 cut(s) 90
AccII CGCG 1 cut(s) 350
AccIII TCCGGA 1 cut(s) 556
AciI CCGC 4 cut(s) 365, 803, 860, 1512
AclI AACGTT 1 cut(s) 527
AclWI GGATC 7 cut(s) 193, 272, 298, 776, 789, 1007, 1142
AcoI YGGCCR 1 cut(s) 502
AcsI RAATTY 3 cut(s) 5, 734, 1012
AdeI CACNNNGTG 1 cut(s) 944
AfaI GTAC 5 cut(s) 56, 662, 1299, 1507, 1666
AflIII ACRYGT 2 cut(s) 835, 1162
AhdI GACNNNNNGTC 1 cut(s) 604
AjnI CCWGG 1 cut(s) 706
AluBI AGCT 8 cut(s) 98, 489, 811, 853, 1098, 1130, 1269, 1774
AluI AGCT 8 cut(s) 98, 489, 811, 853, 1098, 1130, 1269, 1774
Alw21I GWGCWC 1 cut(s) 100
Alw26I GTCTC 1 cut(s) 1394
AlwI GGATC 7 cut(s) 193, 272, 298, 776, 789, 1007, 1142
Aor13HI TCCGGA 1 cut(s) 556
AoxI GGCC 4 cut(s) 282, 502, 709, 1207
ApeKI GCWGC 6 cut(s) 337, 568, 764, 1043, 1098, 1347
ApoI RAATTY 3 cut(s) 5, 734, 1012
AseI ATTAAT 1 cut(s) 1155
AspLEI GCGC 3 cut(s) 83, 1280, 1531
AspS9I GGNCC 1 cut(s) 1447
AsuHPI GGTGA 7 cut(s) 43, 812, 971, 1063, 1233, 1349, 1811
AvaII GGWCC 1 cut(s) 1447
AxyI CCTNAGG 1 cut(s) 1464
BalI TGGCCA 1 cut(s) 504
BamHI GGATCC 1 cut(s) 781
BanII GRGCYC 1 cut(s) 100
BarI GAAGNNNNNNTAC 4 cut(s) 1375, 1407, 1498, 1530
BbsI GAAGAC 1 cut(s) 290
Bbv12I GWGCWC 1 cut(s) 100
BbvI GCAGC 6 cut(s) 349, 580, 751, 1030, 1085, 1359
BccI CCATC 6 cut(s) 219, 320, 544, 1058, 1252, 1373
BceAI ACGGC 3 cut(s) 1419, 1495, 1683
BciT130I CCWGG 1 cut(s) 708
BcoDI GTCTC 1 cut(s) 1394
BfmI CTRYAG 1 cut(s) 91
BfoI RGCGCY 2 cut(s) 84, 1281
BisI GCNGC 6 cut(s) 338, 569, 765, 1044, 1099, 1348
BlsI GCNGC 6 cut(s) 339, 570, 766, 1045, 1100, 1349
Bme1390I CCNGG 1 cut(s) 708
Bme18I GGWCC 1 cut(s) 1447
BmeRI GACNNNNNGTC 1 cut(s) 604
BmgT120I GGNCC 1 cut(s) 1447
BmiI GGNNCC 3 cut(s) 555, 783, 1449
BmrFI CCNGG 1 cut(s) 708
BmsI GCATC 3 cut(s) 114, 1077, 1415
BpiI GAAGAC 1 cut(s) 290
BpmI CTGGAG 2 cut(s) 1114, 1796
BpuEI CTTGAG 2 cut(s) 167, 209
Bsa29I ATCGAT 1 cut(s) 1190
BsaJI CCNNGG 4 cut(s) 397, 889, 1210, 1417
BsaWI WCCGGW 2 cut(s) 28, 556
Bse118I RCCGGY 1 cut(s) 248
Bse1I ACTGG 7 cut(s) 441, 505, 630, 1097, 1458, 1612, 1641
Bse21I CCTNAGG 1 cut(s) 1464
Bse3DI GCAATG 2 cut(s) 391, 1074
BseAI TCCGGA 1 cut(s) 556
BseBI CCWGG 1 cut(s) 708
BseCI ATCGAT 1 cut(s) 1190
BseDI CCNNGG 4 cut(s) 397, 889, 1210, 1417
BseGI GGATG 4 cut(s) 105, 211, 555, 1508
BseMI GCAATG 2 cut(s) 391, 1074
BseMII CTCAG 1 cut(s) 918
BseNI ACTGG 7 cut(s) 441, 505, 630, 1097, 1458, 1612, 1641
BseRI GAGGAG 1 cut(s) 693
BseXI GCAGC 6 cut(s) 349, 580, 751, 1030, 1085, 1359
BsgI GTGCAG 2 cut(s) 209, 474
Bsh1236I CGCG 1 cut(s) 350
BshFI GGCC 4 cut(s) 284, 504, 711, 1209
BshVI ATCGAT 1 cut(s) 1190
BsiHKAI GWGCWC 1 cut(s) 100
BsiSI CCGG 3 cut(s) 29, 249, 557
BslFI GGGAC 2 cut(s) 740, 1433
BsmAI GTCTC 1 cut(s) 1394
BsmBI CGTCTC 1 cut(s) 1394
BsmFI GGGAC 2 cut(s) 740, 1433
BsmI GAATGC 2 cut(s) 703, 841
BsnI GGCC 4 cut(s) 284, 504, 711, 1209
Bsp1286I GDGCHC 1 cut(s) 100
Bsp13I TCCGGA 1 cut(s) 556
Bsp19I CCATGG 1 cut(s) 397
Bsp68I TCGCGA 1 cut(s) 350
BspACI CCGC 4 cut(s) 365, 803, 860, 1512
BspANI GGCC 4 cut(s) 284, 504, 711, 1209
BspCNI CTCAG 1 cut(s) 919
BspDI ATCGAT 1 cut(s) 1190
BspEI TCCGGA 1 cut(s) 556
BspFNI CGCG 1 cut(s) 350
BspHI TCATGA 1 cut(s) 306
BspLI GGNNCC 3 cut(s) 555, 783, 1449
BspPI GGATC 7 cut(s) 193, 272, 298, 776, 789, 1007, 1142
BsrDI GCAATG 2 cut(s) 391, 1074
BsrFI RCCGGY 1 cut(s) 248
BsrI ACTGG 7 cut(s) 441, 505, 630, 1097, 1458, 1612, 1641
BssAI RCCGGY 1 cut(s) 248
BssECI CCNNGG 4 cut(s) 397, 889, 1210, 1417
BssT1I CCWWGG 4 cut(s) 397, 889, 1210, 1417
Bst2UI CCWGG 1 cut(s) 708
Bst4CI ACNGT 5 cut(s) 54, 88, 124, 824, 1447
Bst6I CTCTTC 3 cut(s) 1367, 1498, 1734
BstAPI GCANNNNNTGC 1 cut(s) 574
BstC8I GCNNGC 3 cut(s) 250, 487, 769
BstDEI CTNAG 4 cut(s) 772, 927, 1464, 1690
BstDSI CCRYGG 1 cut(s) 397
BstF5I GGATG 4 cut(s) 105, 211, 555, 1508
BstFNI CGCG 1 cut(s) 350
BstH2I RGCGCY 2 cut(s) 84, 1281
BstHHI GCGC 3 cut(s) 83, 1280, 1531
BstMAI GTCTC 1 cut(s) 1394
BstMWI GCNNNNNNNGC 3 cut(s) 574, 1275, 1780
BstNI CCWGG 1 cut(s) 708
BstNSI RCATGY 3 cut(s) 518, 839, 1166
BstSCI CCNGG 1 cut(s) 706
BstSFI CTRYAG 1 cut(s) 91
BstUI CGCG 1 cut(s) 350
BstV1I GCAGC 6 cut(s) 349, 580, 751, 1030, 1085, 1359
BstV2I GAAGAC 1 cut(s) 290
BstX2I RGATCY 2 cut(s) 781, 1147
BstXI CCANNNNNNTGG 2 cut(s) 326, 1706
BstYI RGATCY 2 cut(s) 781, 1147
Bsu15I ATCGAT 1 cut(s) 1190
Bsu36I CCTNAGG 1 cut(s) 1464
BsuRI GGCC 4 cut(s) 284, 504, 711, 1209
BsuTUI ATCGAT 1 cut(s) 1190
BtgI CCRYGG 1 cut(s) 397
BtsCI GGATG 4 cut(s) 105, 211, 555, 1508
BtsI GCAGTG 2 cut(s) 232, 243
BtsIMutI CAGTG 9 cut(s) 232, 243, 498, 623, 1009, 1254, 1339, 1605, 1648
BtuMI TCGCGA 1 cut(s) 350
Cac8I GCNNGC 3 cut(s) 250, 487, 769
CciI TCATGA 1 cut(s) 306
CfoI GCGC 3 cut(s) 83, 1280, 1531
Cfr10I RCCGGY 1 cut(s) 248
Cfr13I GGNCC 1 cut(s) 1447
ClaI ATCGAT 1 cut(s) 1190
CseI GACGC 2 cut(s) 179, 782
Csp6I GTAC 5 cut(s) 55, 661, 1298, 1506, 1665
CviQI GTAC 5 cut(s) 55, 661, 1298, 1506, 1665
DdeI CTNAG 4 cut(s) 772, 927, 1464, 1690
DraI TTTAAA 2 cut(s) 592, 751
DraIII CACNNNGTG 1 cut(s) 944
DrdI GACNNNNNNGTC 1 cut(s) 1733
DriI GACNNNNNGTC 1 cut(s) 604
DseDI GACNNNNNNGTC 1 cut(s) 1733
EaeI YGGCCR 1 cut(s) 502
Eam1104I CTCTTC 3 cut(s) 1367, 1498, 1734
Eam1105I GACNNNNNGTC 1 cut(s) 604
EarI CTCTTC 3 cut(s) 1367, 1498, 1734
Ecl136II GAGCTC 1 cut(s) 98
Eco130I CCWWGG 4 cut(s) 397, 889, 1210, 1417
Eco24I GRGCYC 1 cut(s) 100
Eco47I GGWCC 1 cut(s) 1447
Eco53kI GAGCTC 1 cut(s) 98
Eco81I CCTNAGG 1 cut(s) 1464
EcoICRI GAGCTC 1 cut(s) 98
EcoRII CCWGG 1 cut(s) 706
EcoT14I CCWWGG 4 cut(s) 397, 889, 1210, 1417
EcoT38I GRGCYC 1 cut(s) 100
ErhI CCWWGG 4 cut(s) 397, 889, 1210, 1417
Esp3I CGTCTC 1 cut(s) 1394
FalI AAGNNNNNCTT 2 cut(s) 934, 966
FaqI GGGAC 2 cut(s) 740, 1433
FauNDI CATATG 1 cut(s) 1396
FblI GTMKAC 1 cut(s) 90
Fnu4HI GCNGC 6 cut(s) 338, 569, 765, 1044, 1099, 1348
FokI GGATG 4 cut(s) 92, 198, 562, 1495
FriOI GRGCYC 1 cut(s) 100
Fsp4HI GCNGC 6 cut(s) 338, 569, 765, 1044, 1099, 1348
GlaI GCGC 3 cut(s) 82, 1279, 1530
GluI GCNGC 6 cut(s) 338, 569, 765, 1044, 1099, 1348
GsuI CTGGAG 2 cut(s) 1114, 1796
HaeII RGCGCY 2 cut(s) 84, 1281
HaeIII GGCC 4 cut(s) 284, 504, 711, 1209
HapII CCGG 3 cut(s) 29, 249, 557
HgaI GACGC 2 cut(s) 179, 782
HhaI GCGC 3 cut(s) 83, 1280, 1531
Hin6I GCGC 3 cut(s) 81, 1278, 1529
HinP1I GCGC 3 cut(s) 81, 1278, 1529
HinfI GANTC 9 cut(s) 217, 817, 863, 947, 1202, 1235, 1434, 1686, 1694
HpaII CCGG 3 cut(s) 29, 249, 557
HphI GGTGA 7 cut(s) 43, 812, 971, 1063, 1233, 1349, 1811
Hpy166II GTNNAC 3 cut(s) 34, 91, 1665
Hpy188I TCNGA 4 cut(s) 180, 216, 1371, 1411
Hpy188III TCNNGA 8 cut(s) 262, 288, 307, 349, 557, 814, 1055, 1648
Hpy8I GTNNAC 3 cut(s) 34, 91, 1665
Hpy99I CGWCG 1 cut(s) 128
HpyAV CCTTC 4 cut(s) 667, 907, 1311, 1335
HpyCH4III ACNGT 5 cut(s) 54, 88, 124, 824, 1447
HpyCH4IV ACGT 1 cut(s) 527
HpyF10VI GCNNNNNNNGC 3 cut(s) 574, 1275, 1780
HpyF3I CTNAG 4 cut(s) 772, 927, 1464, 1690
HpySE526I ACGT 1 cut(s) 527
HspAI GCGC 3 cut(s) 81, 1278, 1529
Kpn2I TCCGGA 1 cut(s) 556
KroI GCCGGC 1 cut(s) 248
KroNI GCCGGC 1 cut(s) 250
LmnI GCTCC 6 cut(s) 559, 652, 706, 850, 1095, 1536
Lsp1109I GCAGC 6 cut(s) 349, 580, 751, 1030, 1085, 1359
LweI GCATC 3 cut(s) 114, 1077, 1415
MaeII ACGT 1 cut(s) 527
MaeIII GTNAC 3 cut(s) 268, 959, 1636
MfeI CAATTG 2 cut(s) 572, 1177
MflI RGATCY 2 cut(s) 781, 1147
MhlI GDGCHC 1 cut(s) 100
MlsI TGGCCA 1 cut(s) 504
MluNI TGGCCA 1 cut(s) 504
MlyI GAGTC 3 cut(s) 872, 956, 1695
MmeI TCCRAC 1 cut(s) 514
Mox20I TGGCCA 1 cut(s) 504
MroI TCCGGA 1 cut(s) 556
MroNI GCCGGC 1 cut(s) 248
MscI TGGCCA 1 cut(s) 504
MslI CAYNNNNRTG 5 cut(s) 324, 396, 414, 582, 642
Msp20I TGGCCA 1 cut(s) 504
MspA1I CMGCKG 1 cut(s) 1130
MspI CCGG 3 cut(s) 29, 249, 557
MspR9I CCNGG 1 cut(s) 708
MunI CAATTG 2 cut(s) 572, 1177
Mva1269I GAATGC 2 cut(s) 703, 841
MvaI CCWGG 1 cut(s) 708
MvnI CGCG 1 cut(s) 350
MwoI GCNNNNNNNGC 3 cut(s) 574, 1275, 1780
NaeI GCCGGC 1 cut(s) 250
NcoI CCATGG 1 cut(s) 397
NdeI CATATG 1 cut(s) 1396
NgoMIV GCCGGC 1 cut(s) 248
NlaIV GGNNCC 3 cut(s) 555, 783, 1449
NmuCI GTSAC 2 cut(s) 268, 959
NruI TCGCGA 1 cut(s) 350
NspI RCATGY 3 cut(s) 518, 839, 1166
PagI TCATGA 1 cut(s) 306
PciI ACATGT 2 cut(s) 835, 1162
PcsI WCGNNNNNNNCGW 1 cut(s) 72
PctI GAATGC 2 cut(s) 703, 841
PdiI GCCGGC 1 cut(s) 250
PfeI GAWTC 6 cut(s) 217, 817, 1202, 1235, 1434, 1694
PkrI GCNGC 6 cut(s) 339, 570, 766, 1045, 1100, 1349
PleI GAGTC 3 cut(s) 871, 955, 1694
PpsI GAGTC 3 cut(s) 871, 955, 1694
PscI ACATGT 2 cut(s) 835, 1162
PshBI ATTAAT 1 cut(s) 1155
PsiI TTATAA 1 cut(s) 1487
Psp124BI GAGCTC 1 cut(s) 100
Psp1406I AACGTT 1 cut(s) 527
Psp6I CCWGG 1 cut(s) 706
PspGI CCWGG 1 cut(s) 706
PspN4I GGNNCC 3 cut(s) 555, 783, 1449
PspPI GGNCC 1 cut(s) 1447
PsuI RGATCY 2 cut(s) 781, 1147
PvuII CAGCTG 1 cut(s) 1130
RruI TCGCGA 1 cut(s) 350
RsaI GTAC 5 cut(s) 56, 662, 1299, 1507, 1666
RsaNI GTAC 5 cut(s) 55, 661, 1298, 1506, 1665
RseI CAYNNNNRTG 5 cut(s) 324, 396, 414, 582, 642
SacI GAGCTC 1 cut(s) 100
SatI GCNGC 6 cut(s) 338, 569, 765, 1044, 1099, 1348
Sau96I GGNCC 1 cut(s) 1447
SchI GAGTC 3 cut(s) 872, 956, 1695
ScrFI CCNGG 1 cut(s) 708
SduI GDGCHC 1 cut(s) 100
SfaNI GCATC 3 cut(s) 114, 1077, 1415
SfcI CTRYAG 1 cut(s) 91
SinI GGWCC 1 cut(s) 1447
SmiMI CAYNNNNRTG 5 cut(s) 324, 396, 414, 582, 642
SmlI CTYRAG 2 cut(s) 146, 224
SmoI CTYRAG 2 cut(s) 146, 224
SsiI CCGC 4 cut(s) 365, 803, 860, 1512
SstI GAGCTC 1 cut(s) 100
StyD4I CCNGG 1 cut(s) 706
StyI CCWWGG 4 cut(s) 397, 889, 1210, 1417
TaaI ACNGT 5 cut(s) 54, 88, 124, 824, 1447
TaiI ACGT 1 cut(s) 530
TaqI TCGA 4 cut(s) 141, 495, 1190, 1737
TaqII GACCGA 1 cut(s) 56
TfiI GAWTC 6 cut(s) 217, 817, 1202, 1235, 1434, 1694
TscAI CASTG 9 cut(s) 239, 250, 505, 630, 1009, 1254, 1339, 1612, 1648
TseFI GTSAC 2 cut(s) 268, 959
TseI GCWGC 6 cut(s) 337, 568, 764, 1043, 1098, 1347
Tsp45I GTSAC 2 cut(s) 268, 959
TspDTI ATGAA 5 cut(s) 323, 398, 686, 1227, 1383
TspRI CASTG 9 cut(s) 239, 250, 505, 630, 1009, 1254, 1339, 1612, 1648
VpaK11BI GGWCC 1 cut(s) 1447
VspI ATTAAT 1 cut(s) 1155
XapI RAATTY 3 cut(s) 5, 734, 1012
XceI RCATGY 3 cut(s) 518, 839, 1166
XmiI GTMKAC 1 cut(s) 90
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.