Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000005

Orthogroup ID

OG0008191

Physical Location & Seq

Genomic Coordinates Reverse (-)

63752871 .. 63755991

Gene Structure 3121 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_5G00384320.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2169 bp

ATGTCGGGTTCCAGCGACAGCGATTCTCCTGCTCCTCAATCATCAGAGCCGGCTGTGAATCAGCAAAAGGCTGTATCCAGGGAGGGCAATGGTTCATCAGACAGCTCTCCTCCTTCGCCACCGGCTAAATCGCCGTCTTCTGAACCTCCATCCTCTCCTCCGAAATCTCCACCTCCCTCATCACCGCCTAAATCCTCACCGACTCCGCAAGAGTCACCTGCTCCTCCGAAAGAGTCACCATCACCACCGCCTCCTTCGCCGCCACCTTCGCCTCCACCGTCATCTCCTTCACCGTCACCGTCATCCCCGCCTAAATCCAAACCACCTCCACCTCCTCCTCCTCATTCCCCACCCCCAAAACCATCATCAGCACCAGGACCATCACCAGATTCTTCTCCTTCTCCACCCAAGTCTGATTCTCCGCCATCAGATAACGATAACGCTCAACCTCCTCCACCATCCGGTAATGAAGGAGATCAGGGCAATCCTAAAACCCCTGTTTCACCTCCGGCGGCTCCCGGCACCCCTGCCACCCCGGCCCCGCCAACACAGAACCAGAACCCGGCCACTCCCGCCGTCCCTACCCCTCCAAAGCAACCTACCACTCCTAAAACTCCACTTCCTTCGACTCCTCCACCCAAACTATCACCACCTCCTACAAACAAGACCAAAACCGCAGATGACTTGAGCTCAAGTAACTCTGGTCACACAGGTACTGTGATAGGCTTGACAGTCGCCGGAGTCTTCCTGCTCGCCTTGGTTGCTGTCGTTTTCCTTTTCGTGAGGAGGAGGAAGAAGAAAAACCAACCTTATCCCCAGAATTACATGGCTCCACCTCCCGGAGCTGGCCTCACACCAGGTTTGATCATTGATGACAATACAGAGGGATATTATCCGGGGCAAGGTCCAAATTCTGGTCAGGCGGAAAGCTACTATTCCAATGGACCATATCCGCAGTCTTCGTTTGAGCAGACGTATGGGAGTCAGAGAGAAAGGAATATGAATGCTGTTGGATCAGAGTCGGATCTCATTGCTGGCCATAAGGTACATTTCAGCTATGAGGAGATGATGGAGATCACCAACGGATTTTCCCGCGCAAATGTGCTTGGTGAGGGTGGTTTTGGGTGTGTCTACAAGGGTTGGATGCCGGATGGGAAAGTGGTGGCGGTCAAGCAGCTTAAGGCCGGTAGCGGGCAGGGAGAGAAGGAATTCAGGGCTGAAGTCGAGATTATCAGTCGAGTCCATCATCGACATTTGGTGTCTTTGGTTGGATATTGCATCTCTGAGCAACAGAGATTGCTTATCTATGAATTTGTTCCAAATCAAACTCTTGAGCACCATTTGCATGCTCCTGGAATGCCGGTGTTGGAATGGACTAAGAGACTCAAGATTGCTTTAGGGTCCGCAAAGGGTTTGGCATATCTACATGAAGACTGTATGTACCTCTTCTTCATTCTCGTCACTACTGCAGTTGCAGACTTTGGACTTGCCAAACTGACAGATGATATGAATACTCATGTATCCACGCGAGTGATGGGAACATTTGGGTACATGGCTCCTGAGTATGCATCAAGTGGGAAGTTGACAGATAGATCAGATGTGTTCTCATTTGGAGTCGTGCTTCTAGAGCTCGTAACTGGGCGCAAACCTGTTGACCCAACTCGGCCTTTGGGGGATGAGAGTTTGGTTGAATGGGCTCGTCCACTCCTTATTAAAGCCCTCGAATCAGGTGACTTGAGCGAACTAGTAGATCCTCGGCTTGAGAAGCATTATGTGGAGGGAGAAATGTTAAGAATGGTTGAGGCAGCAGCTGCATGCGTGCGTCATTCTGCTACAAAACGACCACGGATGGCACAGGTCTGTAGAGCATTGGACTGTGAAGGTGATGATCTCTCGAATGGGGTGAAATTTGGGCAGAGTACCGCTTATGACTCCGGCCAGTACAACGAAGACATTATGAGATTCAGGAGGATGGCATTAGGCACCGGCAGCTCAGAGTTTGAAGCGTCTAGTGCAGAATTCACCGGTTCCAGAGAGCTATCAGGACCTCAAACTTCATGGACTACGACTCGCCCAGATGTTTCAAGCGACGAATCAGAAACTCGAGCATTCAACAACCAGGGTAATGCCAGCAAGAACCAACGCAACACCAGTGTCCGGCGGTACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005488 GO:0005515 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0019899 GO:0019900 GO:0019901 GO:0023052 GO:0032502 GO:0036211 GO:0038023 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060089 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164

Pfam Domains

Protein Families

Pkinase Pkinase_Tyr

Protein Analysis

722

Amino Acids

76.9

Weight (kDa)

6.21

Isoelectric Point (pI)

70.66

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	365 - 552	9e-30	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	366 - 623	7.9e-35	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008191)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G10620 AT1G23540 AT1G23540 AT1G70450 AT1G70460
fragaria_vesca	FvH4_4g34330
malus_domestica	MD13G1092900.v1.1 MD16G1093800.v1.1
prunus_persica	Prupe.1G252700_v2.0.a1 Prupe.1G252700_v2.0.a1 Prupe.1G252700_v2.0.a1
pyrus_communis	pycom13g08090
rosa_chinensis	RchiOBHm_Chr4g0443751
rosa_laevigata	RLG00000005893
rosa_multiflora	Rmu_co8490185.1_g000001 Rmu_sc0001426.1_g000001
rosa_roxburghii	Rroxscaffold_5G00384320
rosa_rugosa	Rorug04G0347100
rosa_samantha	Rh4AG407200 Rh4BG418100 Rh4CG432300 Rh4DG413400
rosa_wichuraiana	Rw4G034970

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	226
Acc36I	ACCTGC	1 cut(s)	226
AccB1I	GGYRCC	2 cut(s)	521, 1982
AccB7I	CCANNNNNTGG	1 cut(s)	914
AccI	GTMKAC	1 cut(s)	1131
AccII	CGCG	2 cut(s)	1095, 1528
AclWI	GGATC	3 cut(s)	1021, 1032, 1745
AcoI	YGGCCR	3 cut(s)	564, 1036, 1936
AcsI	RAATTY	5 cut(s)	910, 1208, 1310, 1907, 2018
AcuI	CTGAAG	1 cut(s)	1239
AfaI	GTAC	7 cut(s)	715, 1047, 1442, 1550, 1921, 1943, 2165
AfiI	CCNNNNNNNGG	8 cut(s)	461, 562, 839, 845, 902, 914, 1191, 2157
AflII	CTTAAG	1 cut(s)	1178
AgeI	ACCGGT	1 cut(s)	2024
AgsI	TTSAA	4 cut(s)	1691, 2003, 2085, 2113
AhlI	ACTAGT	1 cut(s)	1744
AjnI	CCWGG	5 cut(s)	77, 373, 856, 1351, 2118
AleI	CACNNNNGTG	1 cut(s)	1529
Alw21I	GWGCWC	3 cut(s)	692, 1338, 1632
Alw26I	GTCTC	1 cut(s)	1375
AlwI	GGATC	3 cut(s)	1021, 1032, 1745
AlwNI	CAGNNNCTG	2 cut(s)	716, 1811
Ama87I	CYCGRG	1 cut(s)	2103
AoxI	GGCC	7 cut(s)	537, 564, 847, 1036, 1182, 1664, 1936
ApeKI	GCWGC	5 cut(s)	1174, 1805, 1808, 1811, 1989
ApoI	RAATTY	5 cut(s)	910, 1208, 1310, 1907, 2018
AsiGI	ACCGGT	1 cut(s)	2024
Asp700I	GAANNNNTTC	2 cut(s)	1208, 1314
AspLEI	GCGC	2 cut(s)	1097, 1644
AspS9I	GGNCC	6 cut(s)	377, 538, 905, 944, 1401, 2045
AsuC2I	CCSGG	5 cut(s)	519, 536, 563, 840, 897
AvaI	CYCGRG	1 cut(s)	2103
AvaII	GGWCC	5 cut(s)	377, 905, 944, 1401, 2045
BaeI	ACNNNNGTAYC	2 cut(s)	1503, 1536
BalI	TGGCCA	1 cut(s)	1038
BanI	GGYRCC	2 cut(s)	521, 1982
BanII	GRGCYC	3 cut(s)	692, 1632, 1699
BarI	GAAGNNNNNNTAC	2 cut(s)	1433, 1465
BbsI	GAAGAC	5 cut(s)	129, 736, 951, 1437, 1956
Bbv12I	GWGCWC	3 cut(s)	692, 1338, 1632
BbvI	GCAGC	5 cut(s)	1186, 1798, 1817, 1820, 2001
BceAI	ACGGC	2 cut(s)	118, 560
BcgI	CGANNNNNNTGC	2 cut(s)	11, 45
BciT130I	CCWGG	5 cut(s)	79, 375, 858, 1353, 2120
BciVI	GTATCC	2 cut(s)	85, 1531
BclI	TGATCA	1 cut(s)	864
BcnI	CCSGG	5 cut(s)	519, 536, 563, 840, 897
BcoDI	GTCTC	1 cut(s)	1375
BcuI	ACTAGT	1 cut(s)	1744
BfaI	CTAG	3 cut(s)	1625, 1745, 2010
BfmI	CTRYAG	2 cut(s)	1467, 1861
BfrI	CTTAAG	1 cut(s)	1178
BfuAI	ACCTGC	1 cut(s)	226
BfuI	GTATCC	2 cut(s)	85, 1531
BglI	GCCNNNNNGGC	1 cut(s)	536
BisI	GCNGC	7 cut(s)	260, 513, 1175, 1806, 1809, 1812, 1990
BlsI	GCNGC	7 cut(s)	261, 514, 1176, 1807, 1810, 1813, 1991
Bme18I	GGWCC	5 cut(s)	377, 905, 944, 1401, 2045
BmeT110I	CYCGRG	1 cut(s)	2103
BmgT120I	GGNCC	6 cut(s)	377, 538, 905, 944, 1401, 2045
BmiI	GGNNCC	9 cut(s)	10, 516, 523, 540, 831, 1402, 1557, 1984, 2029
BmrI	ACTGGG	1 cut(s)	1647
BmsI	GCATC	3 cut(s)	1134, 1287, 1577
BmuI	ACTGGG	1 cut(s)	1647
BpiI	GAAGAC	5 cut(s)	129, 736, 951, 1437, 1956
BplI	GAGNNNNNCTC	2 cut(s)	834, 866
BpuEI	CTTGAG	6 cut(s)	676, 706, 1352, 1370, 1756, 1781
BpuMI	CCSGG	5 cut(s)	519, 536, 563, 840, 897
BsaBI	GATNNNNATC	1 cut(s)	1073
BsaJI	CCNNGG	7 cut(s)	78, 534, 756, 896, 1754, 1844, 2119
BsaWI	WCCGGW	2 cut(s)	461, 2024
Bsc4I	CCNNNNNNNGG	8 cut(s)	461, 562, 839, 845, 902, 914, 1191, 2157
Bse118I	RCCGGY	6 cut(s)	49, 121, 1184, 1360, 1985, 2024
Bse1I	ACTGG	3 cut(s)	1642, 1939, 2151
Bse3DI	GCAATG	2 cut(s)	94, 1029
Bse8I	GATNNNNATC	1 cut(s)	1073
BseBI	CCWGG	5 cut(s)	79, 375, 858, 1353, 2120
BseDI	CCNNGG	7 cut(s)	78, 534, 756, 896, 1754, 1844, 2119
BseGI	GGATG	8 cut(s)	149, 302, 458, 1149, 1156, 1681, 1854, 1977
BseJI	GATNNNNATC	1 cut(s)	1073
BseLI	CCNNNNNNNGG	8 cut(s)	461, 562, 839, 845, 902, 914, 1191, 2157
BseMI	GCAATG	2 cut(s)	94, 1029
BseMII	CTCAG	3 cut(s)	1275, 1551, 2007
BseNI	ACTGG	3 cut(s)	1642, 1939, 2151
BseXI	GCAGC	5 cut(s)	1186, 1798, 1817, 1820, 2001
BsgI	GTGCAG	1 cut(s)	2034
Bsh1236I	CGCG	2 cut(s)	1095, 1528
BshFI	GGCC	7 cut(s)	539, 566, 849, 1038, 1184, 1666, 1938
BshNI	GGYRCC	2 cut(s)	521, 1982
BshTI	ACCGGT	1 cut(s)	2024
BsiHKAI	GWGCWC	3 cut(s)	692, 1338, 1632
BsiHKCI	CYCGRG	1 cut(s)	2103
BslFI	GGGAC	1 cut(s)	563
BslI	CCNNNNNNNGG	8 cut(s)	461, 562, 839, 845, 902, 914, 1191, 2157
BsmAI	GTCTC	1 cut(s)	1375
BsmFI	GGGAC	1 cut(s)	563
BsmI	GAATGC	3 cut(s)	1009, 1362, 2108
BsnI	GGCC	7 cut(s)	539, 566, 849, 1038, 1184, 1666, 1938
BsoBI	CYCGRG	1 cut(s)	2103
Bsp1286I	GDGCHC	4 cut(s)	692, 1338, 1632, 1699
Bsp143I	GATC	8 cut(s)	475, 864, 1013, 1024, 1074, 1592, 1750, 1888
BspANI	GGCC	7 cut(s)	539, 566, 849, 1038, 1184, 1666, 1938
BspCNI	CTCAG	3 cut(s)	1276, 1552, 2006
BspFNI	CGCG	2 cut(s)	1095, 1528
BspLI	GGNNCC	9 cut(s)	10, 516, 523, 540, 831, 1402, 1557, 1984, 2029
BspMAI	CTGCAG	1 cut(s)	1471
BspMI	ACCTGC	1 cut(s)	226
BspPI	GGATC	3 cut(s)	1021, 1032, 1745
BspT107I	GGYRCC	2 cut(s)	521, 1982
BspTI	CTTAAG	1 cut(s)	1178
BsrDI	GCAATG	2 cut(s)	94, 1029
BsrFI	RCCGGY	6 cut(s)	49, 121, 1184, 1360, 1985, 2024
BsrI	ACTGG	3 cut(s)	1642, 1939, 2151
BssAI	RCCGGY	6 cut(s)	49, 121, 1184, 1360, 1985, 2024
BssECI	CCNNGG	7 cut(s)	78, 534, 756, 896, 1754, 1844, 2119
BssMI	GATC	8 cut(s)	475, 864, 1013, 1024, 1074, 1592, 1750, 1888
BssT1I	CCWWGG	1 cut(s)	756
Bst2UI	CCWGG	5 cut(s)	79, 375, 858, 1353, 2120
Bst4CI	ACNGT	7 cut(s)	279, 294, 300, 718, 733, 1436, 1877
Bst6I	CTCTTC	1 cut(s)	1451
BstAFI	CTTAAG	1 cut(s)	1178
BstAPI	GCANNNNNTGC	2 cut(s)	1342, 1811
BstC8I	GCNNGC	9 cut(s)	51, 753, 847, 1036, 1193, 1347, 1816, 1820, 2131
BstDEI	CTNAG	4 cut(s)	1284, 1377, 1560, 1993
BstDSI	CCRYGG	1 cut(s)	1844
BstF5I	GGATG	8 cut(s)	149, 302, 458, 1149, 1156, 1681, 1854, 1977
BstFNI	CGCG	2 cut(s)	1095, 1528
BstHHI	GCGC	2 cut(s)	1097, 1644
BstKTI	GATC	8 cut(s)	478, 867, 1016, 1027, 1077, 1595, 1753, 1891
BstMAI	GTCTC	1 cut(s)	1375
BstMBI	GATC	8 cut(s)	475, 864, 1013, 1024, 1074, 1592, 1750, 1888
BstNI	CCWGG	5 cut(s)	79, 375, 858, 1353, 2120
BstNSI	RCATGY	2 cut(s)	1349, 1818
BstSFI	CTRYAG	2 cut(s)	1467, 1861
BstUI	CGCG	2 cut(s)	1095, 1528
BstV1I	GCAGC	5 cut(s)	1186, 1798, 1817, 1820, 2001
BstV2I	GAAGAC	5 cut(s)	129, 736, 951, 1437, 1956
BstX2I	RGATCY	2 cut(s)	1024, 1750
BstYI	RGATCY	2 cut(s)	1024, 1750
BsuI	GTATCC	2 cut(s)	85, 1531
BsuRI	GGCC	7 cut(s)	539, 566, 849, 1038, 1184, 1666, 1938
BtgI	CCRYGG	1 cut(s)	1844
BtsCI	GGATG	8 cut(s)	149, 302, 458, 1149, 1156, 1681, 1854, 1977
BtsIMutI	CAGTG	1 cut(s)	2158
BveI	ACCTGC	1 cut(s)	226
Cac8I	GCNNGC	9 cut(s)	51, 753, 847, 1036, 1193, 1347, 1816, 1820, 2131
CaiI	CAGNNNCTG	2 cut(s)	716, 1811
CfoI	GCGC	2 cut(s)	1097, 1644
Cfr10I	RCCGGY	6 cut(s)	49, 121, 1184, 1360, 1985, 2024
Cfr13I	GGNCC	6 cut(s)	377, 538, 905, 944, 1401, 2045
CseI	GACGC	2 cut(s)	1811, 1995
CsiI	ACCWGGT	1 cut(s)	856
Csp6I	GTAC	7 cut(s)	714, 1046, 1441, 1549, 1920, 1942, 2164
CspAI	ACCGGT	1 cut(s)	2024
CviAII	CATG	7 cut(s)	826, 1346, 1427, 1517, 1552, 1815, 2058
CviQI	GTAC	7 cut(s)	714, 1046, 1441, 1549, 1920, 1942, 2164
DdeI	CTNAG	4 cut(s)	1284, 1377, 1560, 1993
DpnI	GATC	8 cut(s)	477, 866, 1015, 1026, 1076, 1594, 1752, 1890
DpnII	GATC	8 cut(s)	475, 864, 1013, 1024, 1074, 1592, 1750, 1888
EaeI	YGGCCR	3 cut(s)	564, 1036, 1936
Eam1104I	CTCTTC	1 cut(s)	1451
EarI	CTCTTC	1 cut(s)	1451
EciI	GGCGGA	2 cut(s)	411, 938
Ecl136II	GAGCTC	2 cut(s)	690, 1630
Eco130I	CCWWGG	1 cut(s)	756
Eco24I	GRGCYC	3 cut(s)	692, 1632, 1699
Eco47I	GGWCC	5 cut(s)	377, 905, 944, 1401, 2045
Eco53kI	GAGCTC	2 cut(s)	690, 1630
Eco57I	CTGAAG	1 cut(s)	1239
Eco88I	CYCGRG	1 cut(s)	2103
EcoICRI	GAGCTC	2 cut(s)	690, 1630
EcoO109I	RGGNCCY	1 cut(s)	2045
EcoRI	GAATTC	2 cut(s)	1208, 2018
EcoRII	CCWGG	5 cut(s)	77, 373, 856, 1351, 2118
EcoT14I	CCWWGG	1 cut(s)	756
EcoT22I	ATGCAT	1 cut(s)	1570
EcoT38I	GRGCYC	3 cut(s)	692, 1632, 1699
ErhI	CCWWGG	1 cut(s)	756
FaeI	CATG	7 cut(s)	829, 1349, 1430, 1520, 1555, 1818, 2061
FaqI	GGGAC	1 cut(s)	563
FatI	CATG	7 cut(s)	825, 1345, 1426, 1516, 1551, 1814, 2057
FauI	CCCGC	5 cut(s)	315, 549, 580, 1100, 1184
FbaI	TGATCA	1 cut(s)	864
FblI	GTMKAC	1 cut(s)	1131
Fnu4HI	GCNGC	7 cut(s)	260, 513, 1175, 1806, 1809, 1812, 1990
FokI	GGATG	8 cut(s)	136, 289, 445, 1156, 1163, 1688, 1861, 1984
FriOI	GRGCYC	3 cut(s)	692, 1632, 1699
Fsp4HI	GCNGC	7 cut(s)	260, 513, 1175, 1806, 1809, 1812, 1990
FspBI	CTAG	3 cut(s)	1625, 1745, 2010
GlaI	GCGC	2 cut(s)	1096, 1643
GluI	GCNGC	7 cut(s)	260, 513, 1175, 1806, 1809, 1812, 1990
HaeIII	GGCC	7 cut(s)	539, 566, 849, 1038, 1184, 1666, 1938
HgaI	GACGC	2 cut(s)	1811, 1995
HhaI	GCGC	2 cut(s)	1097, 1644
Hin1II	CATG	7 cut(s)	829, 1349, 1430, 1520, 1555, 1818, 2061
Hin6I	GCGC	2 cut(s)	1095, 1642
HinP1I	GCGC	2 cut(s)	1095, 1642
HincII	GTYRAC	2 cut(s)	1584, 1654
HindII	GTYRAC	2 cut(s)	1584, 1654
Hpy166II	GTNNAC	4 cut(s)	1132, 1584, 1654, 1703
Hpy8I	GTNNAC	4 cut(s)	1132, 1584, 1654, 1703
Hpy99I	CGWCG	1 cut(s)	2093
HpyAV	CCTTC	9 cut(s)	123, 264, 276, 297, 408, 464, 633, 1198, 1874
HpyCH4III	ACNGT	7 cut(s)	279, 294, 300, 718, 733, 1436, 1877
HpyCH4IV	ACGT	1 cut(s)	974
HpyCH4V	TGCA	7 cut(s)	1278, 1345, 1469, 1475, 1568, 1814, 2015
HpyF3I	CTNAG	4 cut(s)	1284, 1377, 1560, 1993
HpySE526I	ACGT	1 cut(s)	974
Hsp92II	CATG	7 cut(s)	829, 1349, 1430, 1520, 1555, 1818, 2061
HspAI	GCGC	2 cut(s)	1095, 1642
KroI	GCCGGC	1 cut(s)	49
KroNI	GCCGGC	1 cut(s)	51
Ksp22I	TGATCA	1 cut(s)	864
Kzo9I	GATC	8 cut(s)	475, 864, 1013, 1024, 1074, 1592, 1750, 1888
LmnI	GCTCC	7 cut(s)	37, 226, 520, 835, 842, 1354, 1561
Lsp1109I	GCAGC	5 cut(s)	1186, 1798, 1817, 1820, 2001
LweI	GCATC	3 cut(s)	1134, 1287, 1577
MabI	ACCWGGT	1 cut(s)	856
MaeI	CTAG	3 cut(s)	1625, 1745, 2010
MaeII	ACGT	1 cut(s)	974
MaeIII	GTNAC	8 cut(s)	213, 234, 294, 695, 704, 1459, 1633, 1730
MalI	GATC	8 cut(s)	477, 866, 1015, 1026, 1076, 1594, 1752, 1890
MboI	GATC	8 cut(s)	475, 864, 1013, 1024, 1074, 1592, 1750, 1888
MflI	RGATCY	2 cut(s)	1024, 1750
MhlI	GDGCHC	4 cut(s)	692, 1338, 1632, 1699
MlsI	TGGCCA	1 cut(s)	1038
MluCI	AATT	6 cut(s)	820, 910, 1208, 1310, 1907, 2018
MluNI	TGGCCA	1 cut(s)	1038
MmeI	TCCRAC	5 cut(s)	991, 1002, 1121, 1249, 1347
Mox20I	TGGCCA	1 cut(s)	1038
Mph1103I	ATGCAT	1 cut(s)	1570
MroNI	GCCGGC	1 cut(s)	49
MroXI	GAANNNNTTC	2 cut(s)	1208, 1314
MscI	TGGCCA	1 cut(s)	1038
MseI	TTAA	3 cut(s)	1179, 1713, 1790
MslI	CAYNNNNRTG	2 cut(s)	1344, 1529
Msp20I	TGGCCA	1 cut(s)	1038
MspA1I	CMGCKG	1 cut(s)	1811
MspCI	CTTAAG	1 cut(s)	1178
Mva1269I	GAATGC	3 cut(s)	1009, 1362, 2108
MvaI	CCWGG	5 cut(s)	79, 375, 858, 1353, 2120
MvnI	CGCG	2 cut(s)	1095, 1528
NaeI	GCCGGC	1 cut(s)	51
NciI	CCSGG	5 cut(s)	519, 536, 563, 840, 897
NdeII	GATC	8 cut(s)	475, 864, 1013, 1024, 1074, 1592, 1750, 1888
NgoMIV	GCCGGC	1 cut(s)	49
NlaIII	CATG	7 cut(s)	829, 1349, 1430, 1520, 1555, 1818, 2061
NlaIV	GGNNCC	9 cut(s)	10, 516, 523, 540, 831, 1402, 1557, 1984, 2029
NmeAIII	GCCGAG	2 cut(s)	1642, 1735
NmuCI	GTSAC	6 cut(s)	213, 234, 294, 704, 1459, 1730
NsiI	ATGCAT	1 cut(s)	1570
NspI	RCATGY	2 cut(s)	1349, 1818
OliI	CACNNNNGTG	1 cut(s)	1529
PaeI	GCATGC	2 cut(s)	1349, 1818
PaeR7I	CTCGAG	1 cut(s)	2103
PaqCI	CACCTGC	1 cut(s)	226
PcsI	WCGNNNNNNNCGW	1 cut(s)	275
PctI	GAATGC	3 cut(s)	1009, 1362, 2108
PdiI	GCCGGC	1 cut(s)	51
PdmI	GAANNNNTTC	2 cut(s)	1208, 1314
PfeI	GAWTC	7 cut(s)	23, 58, 389, 416, 1724, 1962, 2093
PflMI	CCANNNNNTGG	1 cut(s)	914
PfoI	TCCNGGA	2 cut(s)	838, 1351
PinAI	ACCGGT	1 cut(s)	2024
PkrI	GCNGC	7 cut(s)	261, 514, 1176, 1807, 1810, 1813, 1991
PpuMI	RGGWCCY	1 cut(s)	2045
Psp124BI	GAGCTC	2 cut(s)	692, 1632
Psp5II	RGGWCCY	1 cut(s)	2045
Psp6I	CCWGG	5 cut(s)	77, 373, 856, 1351, 2118
PspGI	CCWGG	5 cut(s)	77, 373, 856, 1351, 2118
PspN4I	GGNNCC	9 cut(s)	10, 516, 523, 540, 831, 1402, 1557, 1984, 2029
PspPI	GGNCC	6 cut(s)	377, 538, 905, 944, 1401, 2045
PspPPI	RGGWCCY	1 cut(s)	2045
PspXI	VCTCGAGB	1 cut(s)	2103
PstI	CTGCAG	1 cut(s)	1471
PstNI	CAGNNNCTG	2 cut(s)	716, 1811
PsuI	RGATCY	2 cut(s)	1024, 1750
PvuII	CAGCTG	1 cut(s)	1811
RsaI	GTAC	7 cut(s)	715, 1047, 1442, 1550, 1921, 1943, 2165
RsaNI	GTAC	7 cut(s)	714, 1046, 1441, 1549, 1920, 1942, 2164
RseI	CAYNNNNRTG	2 cut(s)	1344, 1529
SacI	GAGCTC	2 cut(s)	692, 1632
SaqAI	TTAA	3 cut(s)	1179, 1713, 1790
SatI	GCNGC	7 cut(s)	260, 513, 1175, 1806, 1809, 1812, 1990
Sau3AI	GATC	8 cut(s)	475, 864, 1013, 1024, 1074, 1592, 1750, 1888
Sau96I	GGNCC	6 cut(s)	377, 538, 905, 944, 1401, 2045
SduI	GDGCHC	4 cut(s)	692, 1338, 1632, 1699
SexAI	ACCWGGT	1 cut(s)	856
SfaNI	GCATC	3 cut(s)	1134, 1287, 1577
SfcI	CTRYAG	2 cut(s)	1467, 1861
Sfr274I	CTCGAG	1 cut(s)	2103
SinI	GGWCC	5 cut(s)	377, 905, 944, 1401, 2045
SlaI	CTCGAG	1 cut(s)	2103
SmiMI	CAYNNNNRTG	2 cut(s)	1344, 1529
SmlI	CTYRAG	8 cut(s)	685, 691, 1178, 1331, 1385, 1735, 1760, 2103
SmoI	CTYRAG	8 cut(s)	685, 691, 1178, 1331, 1385, 1735, 1760, 2103
SpeI	ACTAGT	1 cut(s)	1744
SphI	GCATGC	2 cut(s)	1349, 1818
Sse9I	AATT	6 cut(s)	820, 910, 1208, 1310, 1907, 2018
SspMI	CTAG	3 cut(s)	1625, 1745, 2010
SstI	GAGCTC	2 cut(s)	692, 1632
StyI	CCWWGG	1 cut(s)	756
TaaI	ACNGT	7 cut(s)	279, 294, 300, 718, 733, 1436, 1877
TaiI	ACGT	1 cut(s)	977
TaqI	TCGA	7 cut(s)	626, 1224, 1237, 1249, 1722, 1895, 2104
TasI	AATT	6 cut(s)	820, 910, 1208, 1310, 1907, 2018
TatI	WGTACW	1 cut(s)	1941
TauI	GCSGC	2 cut(s)	262, 515
TfiI	GAWTC	7 cut(s)	23, 58, 389, 416, 1724, 1962, 2093
Tru1I	TTAA	3 cut(s)	1179, 1713, 1790
Tru9I	TTAA	3 cut(s)	1179, 1713, 1790
TscAI	CASTG	1 cut(s)	2158
TseFI	GTSAC	6 cut(s)	213, 234, 294, 704, 1459, 1730
TseI	GCWGC	5 cut(s)	1174, 1805, 1808, 1811, 1989
Tsp45I	GTSAC	6 cut(s)	213, 234, 294, 704, 1459, 1730
TspDTI	ATGAA	8 cut(s)	84, 483, 1016, 1323, 1441, 1443, 1523, 2046
TspGWI	ACGGA	2 cut(s)	1098, 1861
TspRI	CASTG	1 cut(s)	2158
Van91I	CCANNNNNTGG	1 cut(s)	914
Vha464I	CTTAAG	1 cut(s)	1178
VpaK11BI	GGWCC	5 cut(s)	377, 905, 944, 1401, 2045
XapI	RAATTY	5 cut(s)	910, 1208, 1310, 1907, 2018
XbaI	TCTAGA	1 cut(s)	1624
XceI	RCATGY	2 cut(s)	1349, 1818
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1531
XhoI	CTCGAG	1 cut(s)	2103
XmiI	GTMKAC	1 cut(s)	1131
XmnI	GAANNNNTTC	2 cut(s)	1208, 1314
XspI	CTAG	3 cut(s)	1625, 1745, 2010
Zsp2I	ATGCAT	1 cut(s)	1570

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.