Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr13

Orthogroup ID

OG0008191

Physical Location & Seq

Genomic Coordinates Forward (+)

6554080 .. 6557497

Gene Structure 3418 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD13G1092900.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2247 bp

ATGTCGGAATCAAACGAGCATGACTCTAATCCTCCTGGCCCAGATTCACCACCCCATGACTCAAACGCACCATCGCCGCCCCACGAGAGTACCGAGGACAAATCAACACCGTCAAACTCACCACCCCATGACTCAATCACACCATCGCCACCTCCGCCATCACAAGCGCCACCTCCGAAATCAGAGCCTCCGCCTCCAAAATCAGACTCACCTGCCCCAAAATCTTCACCATCCCCCGAACCTTCGCCGCCACCAGCATCTCCACCGCCATCATCACCTCCACCATCATCACCATCTCCGTCTTCTCCACCCCCATCTTCACCACCGCCTTCATCATCACCACCAAAATCACCTTCTCCTCCTCCTCGTTCACCACCACCATCATCATCAAAAGACAAACCAACATCCGGATCATCACCACCTTCTCCTCCAGCTTCACCATCTCCTCCTAGTATTACTGATGGCAATAGTCCTAAACCATCCTCTGGCGACAGTTCATCACCTACATCACCACCAACTGATTCATCACAAGATGATAAAGGCTCCCCATCCTCACCCAGTGTCTCTCAGTCCCCTCCAGCCTCTCCACCTCCAGCTACACCTACAACCAACCCCACCGCCCCATCTCCTCCTACAGTGCCTAGCGCTCCAGTGGTTCCGGGTTCAGGAGCTACTACAACTCAGCCTGTCCCTCGCCCTGATAATTCCACCCCCACCCTCTCCCCTCCCTCAACGAGAAGTCAGGTTACAGGCGACTCAGGGGGTAGTAGTAGGCATACAGGTACTGTTGTGGGCTTGACGGTAGCTGGAGTTTTCATCATTGCCTTGGTAGCCCTCATTGTTGTGTTTGTAAGGAAGAGAAAGAAGCAGGCCCAACCATACCCTCCAAATTACATGCCTCCCACTCCCGGTCCCCATGGCGGTAACTTATCAACTCCAGGTGGATATTATCATGCGCAGCAACAGAGTTCCGCAACTTCTGGTCCAACAGAAAGCTTTTATTCGAGTGGACCGGCCGGACCTTCCTCCTATGAAAACAGCTACCAAGGTAATCCGCCCAGTTCTGGAGATTCCGGTCTTATTGCTGCTACCAAGGTTCATTTCACCTACGAAGAGTTGATGGAGATAACGAATGGATTTTCACGTCAAAACGTTATCGGTGAGGGTGGTTTCGGATGTGTGTACAAGGGTTGGATGCCGGATGGAAGAGTTGTGGCAGTCAAGCAGCTCAAGGCTGGTAGCGGGCAGGGAGAGAAGGAATTCAGGGCTGAAGTTGAGATTATTAGTCGCGTGCATCATCGTTACTTGGTCTCTTTGGTGGGATACTGCATCTTTGAACAGCAAAGATTGCTTATCTATGAATTTGTTCCTAATAAAACTCTTGAGCACCATTTGCATGGTGCCGGAATGCCGGTGTTGGAATGGACCAAGAGACTCAAGATTGCTTTGGGGTCTGCAAAAGGCTTGGCGTATTTACACGAAGACTGCCATCCAAAGATTATTCACAGAGACATTAAATCGGCAAACATTCTGCTGGATGATGCCTTTGAAGCACAGGTTGCAGACTTTGGGCTTGCCAAACTTACAGACGGCACCAATACTCACGTATCCACTCGAGTCATGGGAACATTTGGGTACATGGCACCTGAGTATGCAAATAGTGGCAAATTGACAGACAGATCAGATGTGTTTTCGTTCGGAGTTGTGCTTCTAGAACTTGTAACCGGGCGGAAACCCGTTGATCCTACTCGACCTTTAGGGGATGAGAGTTTGGTTGAATGGGCTCGTCCCCTTCTAATTCAAGCCCTTGAAACTGGCGACTTGAGCAAATTAGTAGATCCTCGGCTTGAGAAGCATTATGTGGAGGTTGAAATGTTCAGAATGATCGAGGCAGCTGCTGCTTGCGTGCGTCATTCTGCTCCAAAACGACCACGAATGGCGCAGGTGGTAAGAGCATTGGACTGTGAAGGCGAATTAAGTGATCTAACGAACGGAGTGAAAGTTGGGCAGAGTACTGCATATGACTCTGGTCAGTACAATAAGGAGATTATGAGATTCAGAAGGATGGCATTAGGCAGTGGAGGCAGCTCAGAGATGTCCAGTGCAGATTTCACTTCCAGAGAGGTATCAGGACCCCAAAGTTTATGGACTCGCCCGGATGCTTCAAGCGATGAATCAGAAACTCGAGCTTTTACCACGCGTGGTGGTGAGCAGATAATCAGTGGGAATCAAGGCAGACGGTTCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005488 GO:0005515 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0019899 GO:0019900 GO:0019901 GO:0023052 GO:0032502 GO:0036211 GO:0038023 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060089 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164

Pfam Domains

Protein Families

Pkinase Pkinase_Tyr

Protein Analysis

749

Amino Acids

78.81

Weight (kDa)

6.19

Isoelectric Point (pI)

78.43

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	381 - 581	9.2e-43	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	383 - 653	7.5e-44	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008191)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G10620 AT1G23540 AT1G23540 AT1G70450 AT1G70460
fragaria_vesca	FvH4_4g34330
malus_domestica	MD13G1092900.v1.1 MD16G1093800.v1.1
prunus_persica	Prupe.1G252700_v2.0.a1 Prupe.1G252700_v2.0.a1 Prupe.1G252700_v2.0.a1
pyrus_communis	pycom13g08090
rosa_chinensis	RchiOBHm_Chr4g0443751
rosa_laevigata	RLG00000005893
rosa_multiflora	Rmu_co8490185.1_g000001 Rmu_sc0001426.1_g000001
rosa_roxburghii	Rroxscaffold_5G00384320
rosa_rugosa	Rorug04G0347100
rosa_samantha	Rh4AG407200 Rh4BG418100 Rh4CG432300 Rh4DG413400
rosa_wichuraiana	Rw4G034970

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	220, 1933
Acc16I	TGCGCA	1 cut(s)	957
Acc36I	ACCTGC	2 cut(s)	220, 1933
AccB1I	GGYRCC	3 cut(s)	1400, 1592, 1642
AccB7I	CCANNNNNTGG	1 cut(s)	485
AccII	CGCG	2 cut(s)	1290, 2200
AccIII	TCCGGA	1 cut(s)	407
AclI	AACGTT	1 cut(s)	1152
AclWI	GGATC	3 cut(s)	418, 1736, 1832
AcoI	YGGCCR	1 cut(s)	1014
AcsI	RAATTY	2 cut(s)	1259, 1361
AcuI	CTGAAG	1 cut(s)	1290
AdeI	CACNNNGTG	1 cut(s)	560
AfaI	GTAC	6 cut(s)	91, 784, 1184, 1637, 2014, 2036
AfeI	AGCGCT	1 cut(s)	646
AfiI	CCNNNNNNNGG	6 cut(s)	407, 485, 665, 908, 920, 1064
AflIII	ACRYGT	1 cut(s)	2198
AgsI	TTSAA	7 cut(s)	1337, 1550, 1778, 1802, 1811, 1871, 2166
AjiI	CACGTC	1 cut(s)	1145
AjnI	CCWGG	2 cut(s)	34, 937
AjuI	GAANNNNNNNTTGG	4 cut(s)	337, 369, 1085, 1117
Alw21I	GWGCWC	1 cut(s)	1389
Alw26I	GTCTC	4 cut(s)	568, 1315, 1426, 1503
AlwI	GGATC	3 cut(s)	418, 1736, 1832
AlwNI	CAGNNNCTG	2 cut(s)	785, 1898
Ama87I	CYCGRG	2 cut(s)	1614, 2184
Aor13HI	TCCGGA	1 cut(s)	407
Aor51HI	AGCGCT	1 cut(s)	646
AoxI	GGCC	3 cut(s)	37, 870, 1014
ApeKI	GCWGC	7 cut(s)	958, 1085, 1225, 1892, 1895, 1898, 2085
ApoI	RAATTY	2 cut(s)	1259, 1361
Asp700I	GAANNNNTTC	2 cut(s)	1259, 1365
AspLEI	GCGC	4 cut(s)	169, 647, 958, 1942
AspS9I	GGNCC	8 cut(s)	38, 871, 911, 983, 1010, 1019, 1425, 2132
AsuC2I	CCSGG	4 cut(s)	660, 909, 1726, 2156
AvaI	CYCGRG	2 cut(s)	1614, 2184
AvaII	GGWCC	6 cut(s)	911, 983, 1010, 1019, 1425, 2132
BaeI	ACNNNNGTAYC	6 cut(s)	73, 106, 774, 807, 1590, 1623
BanI	GGYRCC	3 cut(s)	1400, 1592, 1642
BanII	GRGCYC	1 cut(s)	1786
BarI	GAAGNNNNNNTAC	2 cut(s)	730, 762
BauI	CACGAG	1 cut(s)	83
BbsI	GAAGAC	2 cut(s)	294, 1488
Bbv12I	GWGCWC	1 cut(s)	1389
BbvI	GCAGC	7 cut(s)	970, 1072, 1237, 1882, 1885, 1904, 2097
BceAI	ACGGC	1 cut(s)	1606
BcgI	CGANNNNNNTGC	2 cut(s)	1877, 1911
BciT130I	CCWGG	2 cut(s)	36, 939
BciVI	GTATCC	2 cut(s)	1316, 1618
BcnI	CCSGG	4 cut(s)	660, 909, 1726, 2156
BcoDI	GTCTC	4 cut(s)	568, 1315, 1426, 1503
BfaI	CTAG	3 cut(s)	450, 642, 1712
BfmI	CTRYAG	1 cut(s)	633
BfoI	RGCGCY	2 cut(s)	170, 648
BfuAI	ACCTGC	2 cut(s)	220, 1933
BfuI	GTATCC	2 cut(s)	1316, 1618
BisI	GCNGC	9 cut(s)	77, 248, 959, 1086, 1226, 1893, 1896, 1899, 2086
BlsI	GCNGC	9 cut(s)	78, 249, 960, 1087, 1227, 1894, 1897, 1900, 2087
BmcAI	AGTACT	1 cut(s)	2014
Bme1390I	CCNGG	6 cut(s)	36, 660, 909, 939, 1726, 2156
Bme18I	GGWCC	6 cut(s)	911, 983, 1010, 1019, 1425, 2132
BmeT110I	CYCGRG	2 cut(s)	1614, 2184
BmgBI	CACGTC	1 cut(s)	1145
BmgT120I	GGNCC	8 cut(s)	38, 871, 911, 983, 1010, 1019, 1425, 2132
BmiI	GGNNCC	7 cut(s)	544, 657, 913, 1402, 1594, 1644, 2134
BmrFI	CCNGG	6 cut(s)	36, 660, 909, 939, 1726, 2156
BmrI	ACTGGG	2 cut(s)	552, 1053
BmsI	GCATC	6 cut(s)	266, 1185, 1303, 1338, 1531, 2149
BmuI	ACTGGG	2 cut(s)	552, 1053
BoxI	GACNNNNGTC	1 cut(s)	2028
BpiI	GAAGAC	2 cut(s)	294, 1488
BplI	GAGNNNNNCTC	2 cut(s)	8, 40
BpmI	CTGGAG	7 cut(s)	414, 561, 576, 633, 828, 921, 1086
BpuEI	CTTGAG	5 cut(s)	1214, 1403, 1421, 1843, 1868
BpuMI	CCSGG	4 cut(s)	660, 909, 1726, 2156
BsaAI	YACGTR	1 cut(s)	1606
BsaI	GGTCTC	1 cut(s)	1315
BsaJI	CCNNGG	6 cut(s)	93, 825, 916, 1045, 1092, 1841
BsaWI	WCCGGW	2 cut(s)	407, 1073
BsaXI	ACNNNNNCTCC	2 cut(s)	1986, 2016
Bsc4I	CCNNNNNNNGG	6 cut(s)	407, 485, 665, 908, 920, 1064
Bse118I	RCCGGY	2 cut(s)	1012, 1411
Bse1I	ACTGG	5 cut(s)	558, 650, 1059, 1819, 2100
Bse3DI	GCAATG	1 cut(s)	819
BseAI	TCCGGA	1 cut(s)	407
BseBI	CCWGG	2 cut(s)	36, 939
BseDI	CCNNGG	6 cut(s)	93, 825, 916, 1045, 1092, 1841
BseLI	CCNNNNNNNGG	6 cut(s)	407, 485, 665, 908, 920, 1064
BseMI	GCAATG	1 cut(s)	819
BseMII	CTCAG	5 cut(s)	581, 695, 771, 1638, 2103
BseNI	ACTGG	5 cut(s)	558, 650, 1059, 1819, 2100
BseRI	GAGGAG	6 cut(s)	348, 351, 354, 417, 435, 618
BseX3I	CGGCCG	1 cut(s)	1014
BseXI	GCAGC	7 cut(s)	970, 1072, 1237, 1882, 1885, 1904, 2097
BsgI	GTGCAG	1 cut(s)	2124
Bsh1236I	CGCG	2 cut(s)	1290, 2200
Bsh1285I	CGRYCG	1 cut(s)	1017
BshFI	GGCC	3 cut(s)	39, 872, 1016
BshNI	GGYRCC	3 cut(s)	1400, 1592, 1642
BsiEI	CGRYCG	1 cut(s)	1017
BsiHKAI	GWGCWC	1 cut(s)	1389
BsiHKCI	CYCGRG	2 cut(s)	1614, 2184
BslFI	GGGAC	4 cut(s)	556, 674, 897, 1773
BslI	CCNNNNNNNGG	6 cut(s)	407, 485, 665, 908, 920, 1064
BsmAI	GTCTC	4 cut(s)	568, 1315, 1426, 1503
BsmFI	GGGAC	4 cut(s)	556, 674, 897, 1773
BsmI	GAATGC	1 cut(s)	1413
BsnI	GGCC	3 cut(s)	39, 872, 1016
Bso31I	GGTCTC	1 cut(s)	1315
BsoBI	CYCGRG	2 cut(s)	1614, 2184
Bsp1286I	GDGCHC	2 cut(s)	1389, 1786
Bsp13I	TCCGGA	1 cut(s)	407
Bsp1407I	TGTACA	1 cut(s)	1182
Bsp143I	GATC	6 cut(s)	410, 1679, 1741, 1837, 1884, 1981
Bsp19I	CCATGG	1 cut(s)	916
BspANI	GGCC	3 cut(s)	39, 872, 1016
BspCNI	CTCAG	5 cut(s)	580, 694, 770, 1639, 2102
BspEI	TCCGGA	1 cut(s)	407
BspFNI	CGCG	2 cut(s)	1290, 2200
BspLI	GGNNCC	7 cut(s)	544, 657, 913, 1402, 1594, 1644, 2134
BspMI	ACCTGC	2 cut(s)	220, 1933
BspPI	GGATC	3 cut(s)	418, 1736, 1832
BspT107I	GGYRCC	3 cut(s)	1400, 1592, 1642
BspTNI	GGTCTC	1 cut(s)	1315
BsrDI	GCAATG	1 cut(s)	819
BsrFI	RCCGGY	2 cut(s)	1012, 1411
BsrGI	TGTACA	1 cut(s)	1182
BsrI	ACTGG	5 cut(s)	558, 650, 1059, 1819, 2100
BssAI	RCCGGY	2 cut(s)	1012, 1411
BssECI	CCNNGG	6 cut(s)	93, 825, 916, 1045, 1092, 1841
BssMI	GATC	6 cut(s)	410, 1679, 1741, 1837, 1884, 1981
BssSI	CACGAG	1 cut(s)	83
BssT1I	CCWWGG	4 cut(s)	825, 916, 1045, 1092
Bst2BI	CACGAG	1 cut(s)	83
Bst2UI	CCWGG	2 cut(s)	36, 939
Bst4CI	ACNGT	7 cut(s)	111, 494, 637, 787, 802, 1964, 2241
Bst6I	CTCTTC	3 cut(s)	851, 1107, 1201
BstAPI	GCANNNNNTGC	4 cut(s)	1348, 1393, 1559, 1898
BstAUI	TGTACA	1 cut(s)	1182
BstBAI	YACGTR	1 cut(s)	1606
BstC8I	GCNNGC	6 cut(s)	870, 1244, 1292, 1575, 1903, 1907
BstDEI	CTNAG	5 cut(s)	567, 681, 757, 1647, 2089
BstDSI	CCRYGG	1 cut(s)	916
BstFNI	CGCG	2 cut(s)	1290, 2200
BstH2I	RGCGCY	2 cut(s)	170, 648
BstHHI	GCGC	4 cut(s)	169, 647, 958, 1942
BstKTI	GATC	6 cut(s)	413, 1682, 1744, 1840, 1887, 1984
BstMAI	GTCTC	4 cut(s)	568, 1315, 1426, 1503
BstMBI	GATC	6 cut(s)	410, 1679, 1741, 1837, 1884, 1981
BstMCI	CGRYCG	1 cut(s)	1017
BstNI	CCWGG	2 cut(s)	36, 939
BstNSI	RCATGY	1 cut(s)	898
BstPAI	GACNNNNGTC	1 cut(s)	2028
BstSCI	CCNGG	6 cut(s)	34, 658, 907, 937, 1724, 2154
BstSFI	CTRYAG	1 cut(s)	633
BstUI	CGCG	2 cut(s)	1290, 2200
BstV1I	GCAGC	7 cut(s)	970, 1072, 1237, 1882, 1885, 1904, 2097
BstV2I	GAAGAC	2 cut(s)	294, 1488
BstX2I	RGATCY	1 cut(s)	1837
BstXI	CCANNNNNNTGG	1 cut(s)	1397
BstYI	RGATCY	1 cut(s)	1837
BstZI	CGGCCG	1 cut(s)	1014
BsuI	GTATCC	2 cut(s)	1316, 1618
BsuRI	GGCC	3 cut(s)	39, 872, 1016
BtgI	CCRYGG	1 cut(s)	916
BtgZI	GCGATG	3 cut(s)	57, 129, 2184
BtrI	CACGTC	1 cut(s)	1145
BtsI	GCAGTG	1 cut(s)	2083
BtsIMutI	CAGTG	6 cut(s)	565, 642, 657, 2083, 2107, 2227
BveI	ACCTGC	2 cut(s)	220, 1933
Cac8I	GCNNGC	6 cut(s)	870, 1244, 1292, 1575, 1903, 1907
CaiI	CAGNNNCTG	2 cut(s)	785, 1898
CfoI	GCGC	4 cut(s)	169, 647, 958, 1942
Cfr10I	RCCGGY	2 cut(s)	1012, 1411
Cfr13I	GGNCC	8 cut(s)	38, 871, 911, 983, 1010, 1019, 1425, 2132
CseI	GACGC	1 cut(s)	1898
Csp6I	GTAC	6 cut(s)	90, 783, 1183, 1636, 2013, 2035
CviAII	CATG	9 cut(s)	20, 56, 128, 895, 917, 953, 1397, 1621, 1639
CviQI	GTAC	6 cut(s)	90, 783, 1183, 1636, 2013, 2035
DdeI	CTNAG	5 cut(s)	567, 681, 757, 1647, 2089
DpnI	GATC	6 cut(s)	412, 1681, 1743, 1839, 1886, 1983
DpnII	GATC	6 cut(s)	410, 1679, 1741, 1837, 1884, 1981
DraIII	CACNNNGTG	1 cut(s)	560
EaeI	YGGCCR	1 cut(s)	1014
EagI	CGGCCG	1 cut(s)	1014
Eam1104I	CTCTTC	3 cut(s)	851, 1107, 1201
EarI	CTCTTC	3 cut(s)	851, 1107, 1201
EciI	GGCGGA	4 cut(s)	144, 180, 1044, 1744
EclXI	CGGCCG	1 cut(s)	1014
Eco130I	CCWWGG	4 cut(s)	825, 916, 1045, 1092
Eco24I	GRGCYC	1 cut(s)	1786
Eco31I	GGTCTC	1 cut(s)	1315
Eco47I	GGWCC	6 cut(s)	911, 983, 1010, 1019, 1425, 2132
Eco47III	AGCGCT	1 cut(s)	646
Eco52I	CGGCCG	1 cut(s)	1014
Eco57I	CTGAAG	1 cut(s)	1290
Eco88I	CYCGRG	2 cut(s)	1614, 2184
EcoO109I	RGGNCCY	1 cut(s)	2132
EcoRI	GAATTC	1 cut(s)	1259
EcoRII	CCWGG	2 cut(s)	34, 937
EcoT14I	CCWWGG	4 cut(s)	825, 916, 1045, 1092
EcoT38I	GRGCYC	1 cut(s)	1786
ErhI	CCWWGG	4 cut(s)	825, 916, 1045, 1092
FaeI	CATG	9 cut(s)	23, 59, 131, 898, 920, 956, 1400, 1624, 1642
FaqI	GGGAC	4 cut(s)	556, 674, 897, 1773
FatI	CATG	9 cut(s)	19, 55, 127, 894, 916, 952, 1396, 1620, 1638
FauI	CCCGC	1 cut(s)	1235
FauNDI	CATATG	1 cut(s)	2020
Fnu4HI	GCNGC	9 cut(s)	77, 248, 959, 1086, 1226, 1893, 1896, 1899, 2086
FriOI	GRGCYC	1 cut(s)	1786
Fsp4HI	GCNGC	9 cut(s)	77, 248, 959, 1086, 1226, 1893, 1896, 1899, 2086
FspBI	CTAG	3 cut(s)	450, 642, 1712
FspI	TGCGCA	1 cut(s)	957
GlaI	GCGC	4 cut(s)	168, 646, 957, 1941
GluI	GCNGC	9 cut(s)	77, 248, 959, 1086, 1226, 1893, 1896, 1899, 2086
GsuI	CTGGAG	7 cut(s)	414, 561, 576, 633, 828, 921, 1086
HaeII	RGCGCY	2 cut(s)	170, 648
HaeIII	GGCC	3 cut(s)	39, 872, 1016
HgaI	GACGC	1 cut(s)	1898
HhaI	GCGC	4 cut(s)	169, 647, 958, 1942
Hin1II	CATG	9 cut(s)	23, 59, 131, 898, 920, 956, 1400, 1624, 1642
Hin6I	GCGC	4 cut(s)	167, 645, 956, 1940
HinP1I	GCGC	4 cut(s)	167, 645, 956, 1940
HindIII	AAGCTT	1 cut(s)	994
Hpy166II	GTNNAC	3 cut(s)	371, 1010, 1183
Hpy188III	TCNNGA	8 cut(s)	408, 666, 1065, 1382, 1438, 1712, 2118, 2130
Hpy8I	GTNNAC	3 cut(s)	371, 1010, 1183
HpyAV	CCTTC	9 cut(s)	252, 339, 363, 432, 1032, 1249, 1802, 1961, 2055
HpyCH4III	ACNGT	7 cut(s)	111, 494, 637, 787, 802, 1964, 2241
HpyCH4IV	ACGT	3 cut(s)	1144, 1152, 1605
HpyCH4V	TGCA	8 cut(s)	1294, 1329, 1396, 1457, 1562, 1655, 2018, 2105
HpyF3I	CTNAG	5 cut(s)	567, 681, 757, 1647, 2089
HpySE526I	ACGT	3 cut(s)	1144, 1152, 1605
Hsp92II	CATG	9 cut(s)	23, 59, 131, 898, 920, 956, 1400, 1624, 1642
HspAI	GCGC	4 cut(s)	167, 645, 956, 1940
Kpn2I	TCCGGA	1 cut(s)	407
Kzo9I	GATC	6 cut(s)	410, 1679, 1741, 1837, 1884, 1981
LmnI	GCTCC	4 cut(s)	548, 652, 668, 1924
Lsp1109I	GCAGC	7 cut(s)	970, 1072, 1237, 1882, 1885, 1904, 2097
LweI	GCATC	6 cut(s)	266, 1185, 1303, 1338, 1531, 2149
MaeI	CTAG	3 cut(s)	450, 642, 1712
MaeII	ACGT	3 cut(s)	1144, 1152, 1605
MaeIII	GTNAC	4 cut(s)	745, 923, 1301, 1720
MalI	GATC	6 cut(s)	412, 1681, 1743, 1839, 1886, 1983
MboI	GATC	6 cut(s)	410, 1679, 1741, 1837, 1884, 1981
MboII	GAAGA	7 cut(s)	216, 294, 309, 868, 1124, 1218, 1493
MflI	RGATCY	1 cut(s)	1837
MhlI	GDGCHC	2 cut(s)	1389, 1786
MluCI	AATT	8 cut(s)	703, 889, 1259, 1361, 1667, 1797, 1829, 1973
MluI	ACGCGT	1 cut(s)	2198
MlyI	GAGTC	9 cut(s)	17, 53, 125, 200, 749, 1428, 1626, 2018, 2143
MmeI	TCCRAC	3 cut(s)	1010, 1172, 1398
MroI	TCCGGA	1 cut(s)	407
MroXI	GAANNNNTTC	2 cut(s)	1259, 1365
MseI	TTAA	2 cut(s)	1515, 1976
MslI	CAYNNNNRTG	2 cut(s)	842, 1395
MspA1I	CMGCKG	1 cut(s)	1895
MspR9I	CCNGG	6 cut(s)	36, 660, 909, 939, 1726, 2156
Mva1269I	GAATGC	1 cut(s)	1413
MvaI	CCWGG	2 cut(s)	36, 939
MvnI	CGCG	2 cut(s)	1290, 2200
NciI	CCSGG	4 cut(s)	660, 909, 1726, 2156
NcoI	CCATGG	1 cut(s)	916
NdeI	CATATG	1 cut(s)	2020
NdeII	GATC	6 cut(s)	410, 1679, 1741, 1837, 1884, 1981
NlaIII	CATG	9 cut(s)	23, 59, 131, 898, 920, 956, 1400, 1624, 1642
NlaIV	GGNNCC	7 cut(s)	544, 657, 913, 1402, 1594, 1644, 2134
NmeAIII	GCCGAG	1 cut(s)	1822
NsbI	TGCGCA	1 cut(s)	957
NspI	RCATGY	1 cut(s)	898
PaeR7I	CTCGAG	2 cut(s)	1614, 2184
PaqCI	CACCTGC	2 cut(s)	220, 1933
PcsI	WCGNNNNNNNCGW	1 cut(s)	90
PctI	GAATGC	1 cut(s)	1413
PdmI	GAANNNNTTC	2 cut(s)	1259, 1365
PfeI	GAWTC	7 cut(s)	8, 44, 521, 1070, 2055, 2174, 2227
PflMI	CCANNNNNTGG	1 cut(s)	485
PkrI	GCNGC	9 cut(s)	78, 249, 960, 1087, 1227, 1894, 1897, 1900, 2087
PleI	GAGTC	9 cut(s)	17, 53, 125, 200, 749, 1428, 1625, 2018, 2143
PpsI	GAGTC	9 cut(s)	17, 53, 125, 200, 749, 1428, 1625, 2018, 2143
Ppu21I	YACGTR	1 cut(s)	1606
PpuMI	RGGWCCY	1 cut(s)	2132
PshAI	GACNNNNGTC	1 cut(s)	2028
Psp1406I	AACGTT	1 cut(s)	1152
Psp5II	RGGWCCY	1 cut(s)	2132
Psp6I	CCWGG	2 cut(s)	34, 937
PspGI	CCWGG	2 cut(s)	34, 937
PspN4I	GGNNCC	7 cut(s)	544, 657, 913, 1402, 1594, 1644, 2134
PspPI	GGNCC	8 cut(s)	38, 871, 911, 983, 1010, 1019, 1425, 2132
PspPPI	RGGWCCY	1 cut(s)	2132
PspXI	VCTCGAGB	2 cut(s)	1614, 2184
PstNI	CAGNNNCTG	2 cut(s)	785, 1898
PsuI	RGATCY	1 cut(s)	1837
PvuII	CAGCTG	1 cut(s)	1895
RsaI	GTAC	6 cut(s)	91, 784, 1184, 1637, 2014, 2036
RsaNI	GTAC	6 cut(s)	90, 783, 1183, 1636, 2013, 2035
RseI	CAYNNNNRTG	2 cut(s)	842, 1395
SaqAI	TTAA	2 cut(s)	1515, 1976
SatI	GCNGC	9 cut(s)	77, 248, 959, 1086, 1226, 1893, 1896, 1899, 2086
Sau3AI	GATC	6 cut(s)	410, 1679, 1741, 1837, 1884, 1981
Sau96I	GGNCC	8 cut(s)	38, 871, 911, 983, 1010, 1019, 1425, 2132
ScaI	AGTACT	1 cut(s)	2014
SchI	GAGTC	9 cut(s)	17, 53, 125, 200, 749, 1428, 1626, 2018, 2143
ScrFI	CCNGG	6 cut(s)	36, 660, 909, 939, 1726, 2156
SduI	GDGCHC	2 cut(s)	1389, 1786
SfaNI	GCATC	6 cut(s)	266, 1185, 1303, 1338, 1531, 2149
SfcI	CTRYAG	1 cut(s)	633
Sfr274I	CTCGAG	2 cut(s)	1614, 2184
SinI	GGWCC	6 cut(s)	911, 983, 1010, 1019, 1425, 2132
SlaI	CTCGAG	2 cut(s)	1614, 2184
SmiMI	CAYNNNNRTG	2 cut(s)	842, 1395
SmlI	CTYRAG	7 cut(s)	1229, 1382, 1436, 1614, 1822, 1847, 2184
SmoI	CTYRAG	7 cut(s)	1229, 1382, 1436, 1614, 1822, 1847, 2184
Sse9I	AATT	8 cut(s)	703, 889, 1259, 1361, 1667, 1797, 1829, 1973
SspMI	CTAG	3 cut(s)	450, 642, 1712
StyD4I	CCNGG	6 cut(s)	34, 658, 907, 937, 1724, 2154
StyI	CCWWGG	4 cut(s)	825, 916, 1045, 1092
TaaI	ACNGT	7 cut(s)	111, 494, 637, 787, 802, 1964, 2241
TaiI	ACGT	3 cut(s)	1147, 1155, 1608
TaqI	TCGA	5 cut(s)	1004, 1615, 1750, 1887, 2185
TasI	AATT	8 cut(s)	703, 889, 1259, 1361, 1667, 1797, 1829, 1973
TatI	WGTACW	3 cut(s)	1182, 2012, 2034
TauI	GCSGC	2 cut(s)	79, 250
TfiI	GAWTC	7 cut(s)	8, 44, 521, 1070, 2055, 2174, 2227
Tru1I	TTAA	2 cut(s)	1515, 1976
Tru9I	TTAA	2 cut(s)	1515, 1976
TscAI	CASTG	6 cut(s)	565, 642, 657, 2083, 2107, 2227
TseI	GCWGC	7 cut(s)	958, 1085, 1225, 1892, 1895, 1898, 2085
TspDTI	ATGAA	8 cut(s)	321, 486, 513, 805, 1047, 1088, 1374, 2187
TspGWI	ACGGA	2 cut(s)	288, 2007
TspRI	CASTG	6 cut(s)	565, 642, 657, 2083, 2107, 2227
Van91I	CCANNNNNTGG	1 cut(s)	485
VpaK11BI	GGWCC	6 cut(s)	911, 983, 1010, 1019, 1425, 2132
XapI	RAATTY	2 cut(s)	1259, 1361
XbaI	TCTAGA	1 cut(s)	1711
XceI	RCATGY	1 cut(s)	898
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1618
XhoI	CTCGAG	2 cut(s)	1614, 2184
XmnI	GAANNNNTTC	2 cut(s)	1259, 1365
XspI	CTAG	3 cut(s)	450, 642, 1712
ZrmI	AGTACT	1 cut(s)	2014

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.