Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0008191

Physical Location & Seq

Genomic Coordinates Reverse (-)

64776209 .. 64779545

Gene Structure 3337 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ41145

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2172 bp

ATGTCGGGTTCCAGTGATTCTCCTGCTCCTCAATCATCAGAGCCGACTGTGAATCAGCAAAAGGCTGTATCCAGGGAGGGAAATGGTTCATCAGACAGCTCTCCTCCTTCGCCACCAGCGAAATCGCCGTCTTCTGAACCTCCATCCTCTCCTCCGAAATCTCCACCTCCCTCATCACCGCCTAAATCCTCACCGACTCCGCAAGAGTCACCTGCTCCTCCGAAAGAGTCACCATCACCACCGCCTCCTTCGCCGCCACCTTCGCCTCCACCGTCATCTCCTTCACCATCACCGTCATCCCCGCCTAAATCCAAACCACCTCCGCCTCCTCCTCCTCATTCCCCACCCCCAAAACCATCATCAGCACCAGGGCCACCACCAGATTCTTCTCCTTCTCCACCCAAGTCTGATTCTCCGCCATCAGATAACGATAACGCTCAACCTCCTCCACCGTCCGGTAATGAAGGCGATCAGGGCAATCCTAAAACCCCTGTTTCACCTCCGGCGGCTCCCGGCACCCCTGCCACCCCTGCCCCGCCAACGCCGAACCAGAACCCGGCCACTCCCGCCGTCCCTAGCCCTCCAAAGCAACCTGCCACTCCTAAAACTCCACTTCCTTCGACTCCTCCACCCAAACTATCACCACCTCCTACAAACAAGACCAAAACCGCTGATGACTCGAGCTCAAGTAACTCTGGTCACACAGGTACTGTGATAGGTTTGACAGTCGCCGGAGTCTTCCTGCTCGCCTTGGTTGCTGTCGTTTTCCTTTTCGTGAGGAGGAGGAAGAAGAAAAACCAACCTTATCCCCAGAATTACATGGCTCCACCTCCCGGAGCTGGTCTCACTTCAGAGGGATATTATCCGGGGCAAGGTCCAAATTCTGGTCAGGCGGAAAGCTACTATTCCAATGGACCATATCCGCAGTCTTCGTTTGACCAGACGTATGGGAGTCAGAGAGAAAGGAATATGAATGCTGTTGGATCGGAATCGGATCTCATTGCTGGCCATAAGGTACATTTCAGCTATGAGGAGATGATGGAGATCACCAACGGATTTTCCCGCGCAAATGTGCTTGGTGAGGGTGGTTTTGGGTGTGTCTACAAGGGTTGGATGCCGGACGGGAAAGTCGTGGCGGTCAAGCAGCTTAAGGCCGGTAGCGGGCAGGGAGAGAAGGAATTCAGGGCTGAAGTTGAGATTATCAGTCGAGTGCATCATCGACATTTGGTGTCTTTGGTTGGATATTGCATCTCTGAGCAACAGAGATTGCTTATCTATGAATTTGTTCCAAATCAAACTCTTGAGCACCATTTGCATGCTCCTGGAATGTCGGTGTTGGAATGGACTAAGAGACTCAAGATTGCTTTAGGGTCCGCAAAGGGTTTGGCATATCTACATGAAGACTGCCATCCAAAAATTATTCACCGAGATATTAAATCAGCGAACATTCTTTTGGATGATTCCTTTGAAGCACAGGCATACTTTGGACTTGCCAAACTGACAGATGATATGAATACTCATGTATCCACGCGAGTGATGGGAACATTTGGGTACATGGCTCCTGAGTATGCATCAAGTGGGAAGTTGACAGATAGATCAGATGTGTTCTCATTTGGAGTCGTGCTTCTAGAGCTCGTAACTGGGCGCAAACCTGTTGACCCAACTCGGCCTTTGGGGGATGAGAGTTTGGTTGAATGGGCTCGTCCACTCCTTATTAAAGCGCTCGAATCAGGTGACTTGAGCGAACTAGTAGATCCTCGGCTTGAGAAGCATTATGTGGAGGGAGAAATGTTAAGAATGGTTGAGGCAGCAGCTGCATGCGTGCGTCATTCTGCTACAAAACGACCACGGATGGCACAGGTCTGTAGAGCATTGGACTGTGAAGGTGATGATCTCTCGAATGGGGTGAAATTTGGGCAGAGTACCGCTTATGACTCTGGCCAGTACAACGAAGACATTATGAGATTCAGGAGGATGGCATTAGGCACCGGCAGCTCAGAGTTTGAAGCGTCTAGTGCAGAATTCACCGGTTCCAGAGAGCTATCAGGACCTCAAACTCCATGGACTACGACTCGCCCAGATGTTTCAAGCGACGAATCAGAAACTCGAGCATTTAACAACCAGGGTAATGCCAGCAAGAACCAACGCAACACCAGTGTCCGGCGCTACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005488 GO:0005515 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0019899 GO:0019900 GO:0019901 GO:0023052 GO:0032502 GO:0036211 GO:0038023 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060089 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164

Pfam Domains

Protein Families

Pkinase Pkinase_Tyr

Protein Analysis

723

Amino Acids

77.06

Weight (kDa)

6.62

Isoelectric Point (pI)

71.98

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	355 - 553	1.5e-39	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	356 - 624	7.3e-42	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008191)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G10620 AT1G23540 AT1G23540 AT1G70450 AT1G70460
fragaria_vesca	FvH4_4g34330
malus_domestica	MD13G1092900.v1.1 MD16G1093800.v1.1
prunus_persica	Prupe.1G252700_v2.0.a1 Prupe.1G252700_v2.0.a1 Prupe.1G252700_v2.0.a1
pyrus_communis	pycom13g08090
rosa_chinensis	RchiOBHm_Chr4g0443751
rosa_laevigata	RLG00000005893
rosa_multiflora	Rmu_co8490185.1_g000001 Rmu_sc0001426.1_g000001
rosa_roxburghii	Rroxscaffold_5G00384320
rosa_rugosa	Rorug04G0347100
rosa_samantha	Rh4AG407200 Rh4BG418100 Rh4CG432300 Rh4DG413400
rosa_wichuraiana	Rw4G034970

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	220
AasI	GACNNNNNNGTC	1 cut(s)	1127
Acc36I	ACCTGC	2 cut(s)	220, 601
AccB1I	GGYRCC	2 cut(s)	515, 1985
AccB7I	CCANNNNNTGG	1 cut(s)	884
AccI	GTMKAC	1 cut(s)	1101
AccII	CGCG	2 cut(s)	1065, 1531
AclWI	GGATC	3 cut(s)	991, 1002, 1748
AcoI	YGGCCR	3 cut(s)	558, 1006, 1939
AcsI	RAATTY	5 cut(s)	880, 1178, 1280, 1910, 2021
AcuI	CTGAAG	2 cut(s)	834, 1209
AfaI	GTAC	5 cut(s)	709, 1017, 1553, 1924, 1946
AfeI	AGCGCT	1 cut(s)	1722
AfiI	CCNNNNNNNGG	8 cut(s)	455, 556, 833, 839, 872, 884, 1161, 2160
AflII	CTTAAG	1 cut(s)	1148
AgeI	ACCGGT	1 cut(s)	2027
AgsI	TTSAA	4 cut(s)	1469, 1694, 2006, 2088
AhlI	ACTAGT	1 cut(s)	1747
AjnI	CCWGG	4 cut(s)	71, 367, 1321, 2121
AjuI	GAANNNNNNNTTGG	2 cut(s)	1436, 1468
AleI	CACNNNNGTG	1 cut(s)	1532
Alw21I	GWGCWC	3 cut(s)	686, 1308, 1635
Alw26I	GTCTC	2 cut(s)	848, 1345
AlwI	GGATC	3 cut(s)	991, 1002, 1748
AlwNI	CAGNNNCTG	2 cut(s)	710, 1814
Ama87I	CYCGRG	2 cut(s)	679, 2106
Aor51HI	AGCGCT	1 cut(s)	1722
AoxI	GGCC	6 cut(s)	371, 558, 1006, 1152, 1667, 1939
ApeKI	GCWGC	5 cut(s)	1144, 1808, 1811, 1814, 1992
ApoI	RAATTY	5 cut(s)	880, 1178, 1280, 1910, 2021
ArsI	GACNNNNNNTTYG	2 cut(s)	113, 145
AsiGI	ACCGGT	1 cut(s)	2027
Asp700I	GAANNNNTTC	3 cut(s)	85, 1178, 1284
AspLEI	GCGC	4 cut(s)	1067, 1647, 1723, 2166
AspS9I	GGNCC	5 cut(s)	371, 875, 914, 1371, 2048
AsuC2I	CCSGG	4 cut(s)	513, 557, 834, 867
AvaI	CYCGRG	2 cut(s)	679, 2106
AvaII	GGWCC	4 cut(s)	875, 914, 1371, 2048
BaeI	ACNNNNGTAYC	2 cut(s)	1506, 1539
BalI	TGGCCA	2 cut(s)	1008, 1941
BanI	GGYRCC	2 cut(s)	515, 1985
BanII	GRGCYC	3 cut(s)	686, 1635, 1702
BbsI	GAAGAC	5 cut(s)	123, 730, 921, 1407, 1959
Bbv12I	GWGCWC	3 cut(s)	686, 1308, 1635
BbvI	GCAGC	5 cut(s)	1156, 1801, 1820, 1823, 2004
BceAI	ACGGC	2 cut(s)	112, 554
BciT130I	CCWGG	4 cut(s)	73, 369, 1323, 2123
BciVI	GTATCC	2 cut(s)	79, 1534
BcnI	CCSGG	4 cut(s)	513, 557, 834, 867
BcoDI	GTCTC	2 cut(s)	848, 1345
BcuI	ACTAGT	1 cut(s)	1747
BfaI	CTAG	4 cut(s)	576, 1628, 1748, 2013
BfmI	CTRYAG	1 cut(s)	1864
BfoI	RGCGCY	2 cut(s)	1724, 2167
BfrI	CTTAAG	1 cut(s)	1148
BfuAI	ACCTGC	2 cut(s)	220, 601
BfuI	GTATCC	2 cut(s)	79, 1534
BisI	GCNGC	7 cut(s)	254, 507, 1145, 1809, 1812, 1815, 1993
BlsI	GCNGC	7 cut(s)	255, 508, 1146, 1810, 1813, 1816, 1994
Bme1390I	CCNGG	8 cut(s)	73, 369, 513, 557, 834, 867, 1323, 2123
Bme18I	GGWCC	4 cut(s)	875, 914, 1371, 2048
BmeT110I	CYCGRG	2 cut(s)	679, 2106
BmgT120I	GGNCC	5 cut(s)	371, 875, 914, 1371, 2048
BmiI	GGNNCC	8 cut(s)	10, 510, 517, 825, 1372, 1560, 1987, 2032
BmrFI	CCNGG	8 cut(s)	73, 369, 513, 557, 834, 867, 1323, 2123
BmrI	ACTGGG	1 cut(s)	1650
BmsI	GCATC	4 cut(s)	1104, 1222, 1257, 1580
BmuI	ACTGGG	1 cut(s)	1650
BpiI	GAAGAC	5 cut(s)	123, 730, 921, 1407, 1959
BplI	GAGNNNNNCTC	2 cut(s)	828, 860
BpuEI	CTTGAG	5 cut(s)	670, 1322, 1340, 1759, 1784
BpuMI	CCSGG	4 cut(s)	513, 557, 834, 867
BsaBI	GATNNNNATC	2 cut(s)	988, 1043
BsaI	GGTCTC	1 cut(s)	848
BsaJI	CCNNGG	8 cut(s)	72, 368, 750, 866, 1757, 1847, 2060, 2122
BsaWI	WCCGGW	2 cut(s)	455, 2027
Bsc4I	CCNNNNNNNGG	8 cut(s)	455, 556, 833, 839, 872, 884, 1161, 2160
Bse118I	RCCGGY	3 cut(s)	1154, 1988, 2027
Bse1I	ACTGG	4 cut(s)	12, 1645, 1942, 2154
Bse3DI	GCAATG	1 cut(s)	999
Bse8I	GATNNNNATC	2 cut(s)	988, 1043
BseBI	CCWGG	4 cut(s)	73, 369, 1323, 2123
BseDI	CCNNGG	8 cut(s)	72, 368, 750, 866, 1757, 1847, 2060, 2122
BseGI	GGATG	8 cut(s)	143, 296, 1119, 1408, 1462, 1684, 1857, 1980
BseJI	GATNNNNATC	2 cut(s)	988, 1043
BseLI	CCNNNNNNNGG	8 cut(s)	455, 556, 833, 839, 872, 884, 1161, 2160
BseMI	GCAATG	1 cut(s)	999
BseMII	CTCAG	3 cut(s)	1245, 1554, 2010
BseNI	ACTGG	4 cut(s)	12, 1645, 1942, 2154
BseXI	GCAGC	5 cut(s)	1156, 1801, 1820, 1823, 2004
BsgI	GTGCAG	1 cut(s)	2037
Bsh1236I	CGCG	2 cut(s)	1065, 1531
BshFI	GGCC	6 cut(s)	373, 560, 1008, 1154, 1669, 1941
BshNI	GGYRCC	2 cut(s)	515, 1985
BshTI	ACCGGT	1 cut(s)	2027
BsiHKAI	GWGCWC	3 cut(s)	686, 1308, 1635
BsiHKCI	CYCGRG	2 cut(s)	679, 2106
BslFI	GGGAC	1 cut(s)	557
BslI	CCNNNNNNNGG	8 cut(s)	455, 556, 833, 839, 872, 884, 1161, 2160
BsmAI	GTCTC	2 cut(s)	848, 1345
BsmFI	GGGAC	1 cut(s)	557
BsmI	GAATGC	1 cut(s)	979
BsnI	GGCC	6 cut(s)	373, 560, 1008, 1154, 1669, 1941
Bso31I	GGTCTC	1 cut(s)	848
BsoBI	CYCGRG	2 cut(s)	679, 2106
Bsp1286I	GDGCHC	4 cut(s)	686, 1308, 1635, 1702
Bsp143I	GATC	7 cut(s)	469, 983, 994, 1044, 1595, 1753, 1891
Bsp19I	CCATGG	1 cut(s)	2060
BspANI	GGCC	6 cut(s)	373, 560, 1008, 1154, 1669, 1941
BspCNI	CTCAG	3 cut(s)	1246, 1555, 2009
BspFNI	CGCG	2 cut(s)	1065, 1531
BspLI	GGNNCC	8 cut(s)	10, 510, 517, 825, 1372, 1560, 1987, 2032
BspMI	ACCTGC	2 cut(s)	220, 601
BspPI	GGATC	3 cut(s)	991, 1002, 1748
BspT107I	GGYRCC	2 cut(s)	515, 1985
BspTI	CTTAAG	1 cut(s)	1148
BspTNI	GGTCTC	1 cut(s)	848
BsrDI	GCAATG	1 cut(s)	999
BsrFI	RCCGGY	3 cut(s)	1154, 1988, 2027
BsrI	ACTGG	4 cut(s)	12, 1645, 1942, 2154
BssAI	RCCGGY	3 cut(s)	1154, 1988, 2027
BssECI	CCNNGG	8 cut(s)	72, 368, 750, 866, 1757, 1847, 2060, 2122
BssMI	GATC	7 cut(s)	469, 983, 994, 1044, 1595, 1753, 1891
BssT1I	CCWWGG	2 cut(s)	750, 2060
Bst2UI	CCWGG	4 cut(s)	73, 369, 1323, 2123
Bst4CI	ACNGT	7 cut(s)	49, 273, 294, 453, 712, 727, 1880
BstAFI	CTTAAG	1 cut(s)	1148
BstAPI	GCANNNNNTGC	2 cut(s)	1312, 1814
BstC8I	GCNNGC	7 cut(s)	747, 1006, 1163, 1317, 1819, 1823, 2134
BstDEI	CTNAG	4 cut(s)	1254, 1347, 1563, 1996
BstDSI	CCRYGG	2 cut(s)	1847, 2060
BstF5I	GGATG	8 cut(s)	143, 296, 1119, 1408, 1462, 1684, 1857, 1980
BstFNI	CGCG	2 cut(s)	1065, 1531
BstH2I	RGCGCY	2 cut(s)	1724, 2167
BstHHI	GCGC	4 cut(s)	1067, 1647, 1723, 2166
BstKTI	GATC	7 cut(s)	472, 986, 997, 1047, 1598, 1756, 1894
BstMAI	GTCTC	2 cut(s)	848, 1345
BstMBI	GATC	7 cut(s)	469, 983, 994, 1044, 1595, 1753, 1891
BstNI	CCWGG	4 cut(s)	73, 369, 1323, 2123
BstNSI	RCATGY	2 cut(s)	1319, 1821
BstSCI	CCNGG	8 cut(s)	71, 367, 511, 555, 832, 865, 1321, 2121
BstSFI	CTRYAG	1 cut(s)	1864
BstUI	CGCG	2 cut(s)	1065, 1531
BstV1I	GCAGC	5 cut(s)	1156, 1801, 1820, 1823, 2004
BstV2I	GAAGAC	5 cut(s)	123, 730, 921, 1407, 1959
BstX2I	RGATCY	2 cut(s)	994, 1753
BstXI	CCANNNNNNTGG	1 cut(s)	947
BstYI	RGATCY	2 cut(s)	994, 1753
BsuI	GTATCC	2 cut(s)	79, 1534
BsuRI	GGCC	6 cut(s)	373, 560, 1008, 1154, 1669, 1941
BtgI	CCRYGG	2 cut(s)	1847, 2060
BtsCI	GGATG	8 cut(s)	143, 296, 1119, 1408, 1462, 1684, 1857, 1980
BtsIMutI	CAGTG	2 cut(s)	19, 2161
BveI	ACCTGC	2 cut(s)	220, 601
Cac8I	GCNNGC	7 cut(s)	747, 1006, 1163, 1317, 1819, 1823, 2134
CaiI	CAGNNNCTG	2 cut(s)	710, 1814
CfoI	GCGC	4 cut(s)	1067, 1647, 1723, 2166
Cfr10I	RCCGGY	3 cut(s)	1154, 1988, 2027
Cfr13I	GGNCC	5 cut(s)	371, 875, 914, 1371, 2048
CseI	GACGC	2 cut(s)	1814, 1998
Csp6I	GTAC	5 cut(s)	708, 1016, 1552, 1923, 1945
CspAI	ACCGGT	1 cut(s)	2027
CviAII	CATG	7 cut(s)	820, 1316, 1397, 1520, 1555, 1818, 2061
CviQI	GTAC	5 cut(s)	708, 1016, 1552, 1923, 1945
DdeI	CTNAG	4 cut(s)	1254, 1347, 1563, 1996
DpnI	GATC	7 cut(s)	471, 985, 996, 1046, 1597, 1755, 1893
DpnII	GATC	7 cut(s)	469, 983, 994, 1044, 1595, 1753, 1891
DrdI	GACNNNNNNGTC	1 cut(s)	1127
DseDI	GACNNNNNNGTC	1 cut(s)	1127
EaeI	YGGCCR	3 cut(s)	558, 1006, 1939
EciI	GGCGGA	3 cut(s)	312, 405, 908
Ecl136II	GAGCTC	2 cut(s)	684, 1633
Eco130I	CCWWGG	2 cut(s)	750, 2060
Eco24I	GRGCYC	3 cut(s)	686, 1635, 1702
Eco31I	GGTCTC	1 cut(s)	848
Eco47I	GGWCC	4 cut(s)	875, 914, 1371, 2048
Eco47III	AGCGCT	1 cut(s)	1722
Eco53kI	GAGCTC	2 cut(s)	684, 1633
Eco57I	CTGAAG	2 cut(s)	834, 1209
Eco88I	CYCGRG	2 cut(s)	679, 2106
EcoICRI	GAGCTC	2 cut(s)	684, 1633
EcoO109I	RGGNCCY	1 cut(s)	2048
EcoRI	GAATTC	2 cut(s)	1178, 2021
EcoRII	CCWGG	4 cut(s)	71, 367, 1321, 2121
EcoT14I	CCWWGG	2 cut(s)	750, 2060
EcoT22I	ATGCAT	1 cut(s)	1573
EcoT38I	GRGCYC	3 cut(s)	686, 1635, 1702
ErhI	CCWWGG	2 cut(s)	750, 2060
FaeI	CATG	7 cut(s)	823, 1319, 1400, 1523, 1558, 1821, 2064
FaqI	GGGAC	1 cut(s)	557
FatI	CATG	7 cut(s)	819, 1315, 1396, 1519, 1554, 1817, 2060
FauI	CCCGC	5 cut(s)	309, 543, 574, 1070, 1154
FblI	GTMKAC	1 cut(s)	1101
Fnu4HI	GCNGC	7 cut(s)	254, 507, 1145, 1809, 1812, 1815, 1993
FokI	GGATG	8 cut(s)	130, 283, 1126, 1395, 1469, 1691, 1864, 1987
FriOI	GRGCYC	3 cut(s)	686, 1635, 1702
Fsp4HI	GCNGC	7 cut(s)	254, 507, 1145, 1809, 1812, 1815, 1993
FspBI	CTAG	4 cut(s)	576, 1628, 1748, 2013
GlaI	GCGC	4 cut(s)	1066, 1646, 1722, 2165
GluI	GCNGC	7 cut(s)	254, 507, 1145, 1809, 1812, 1815, 1993
HaeII	RGCGCY	2 cut(s)	1724, 2167
HaeIII	GGCC	6 cut(s)	373, 560, 1008, 1154, 1669, 1941
HgaI	GACGC	2 cut(s)	1814, 1998
HhaI	GCGC	4 cut(s)	1067, 1647, 1723, 2166
Hin1II	CATG	7 cut(s)	823, 1319, 1400, 1523, 1558, 1821, 2064
Hin6I	GCGC	4 cut(s)	1065, 1645, 1721, 2164
HinP1I	GCGC	4 cut(s)	1065, 1645, 1721, 2164
HincII	GTYRAC	2 cut(s)	1587, 1657
HindII	GTYRAC	2 cut(s)	1587, 1657
Hpy166II	GTNNAC	4 cut(s)	1102, 1587, 1657, 1706
Hpy188III	TCNNGA	9 cut(s)	775, 1301, 1357, 1562, 1628, 1897, 1969, 2034, 2046
Hpy8I	GTNNAC	4 cut(s)	1102, 1587, 1657, 1706
Hpy99I	CGWCG	1 cut(s)	2096
HpyAV	CCTTC	9 cut(s)	117, 258, 270, 291, 402, 458, 627, 1168, 1877
HpyCH4III	ACNGT	7 cut(s)	49, 273, 294, 453, 712, 727, 1880
HpyCH4IV	ACGT	1 cut(s)	944
HpyCH4V	TGCA	6 cut(s)	1213, 1248, 1315, 1571, 1817, 2018
HpyF3I	CTNAG	4 cut(s)	1254, 1347, 1563, 1996
HpySE526I	ACGT	1 cut(s)	944
Hsp92II	CATG	7 cut(s)	823, 1319, 1400, 1523, 1558, 1821, 2064
HspAI	GCGC	4 cut(s)	1065, 1645, 1721, 2164
Kzo9I	GATC	7 cut(s)	469, 983, 994, 1044, 1595, 1753, 1891
LmnI	GCTCC	7 cut(s)	31, 220, 514, 829, 836, 1324, 1564
Lsp1109I	GCAGC	5 cut(s)	1156, 1801, 1820, 1823, 2004
LweI	GCATC	4 cut(s)	1104, 1222, 1257, 1580
MaeI	CTAG	4 cut(s)	576, 1628, 1748, 2013
MaeII	ACGT	1 cut(s)	944
MaeIII	GTNAC	6 cut(s)	207, 228, 689, 698, 1636, 1733
MalI	GATC	7 cut(s)	471, 985, 996, 1046, 1597, 1755, 1893
MboI	GATC	7 cut(s)	469, 983, 994, 1044, 1595, 1753, 1891
MboII	GAAGA	8 cut(s)	123, 378, 730, 799, 802, 921, 1412, 1964
MflI	RGATCY	2 cut(s)	994, 1753
MhlI	GDGCHC	4 cut(s)	686, 1308, 1635, 1702
MlsI	TGGCCA	2 cut(s)	1008, 1941
MluCI	AATT	7 cut(s)	814, 880, 1178, 1280, 1416, 1910, 2021
MluNI	TGGCCA	2 cut(s)	1008, 1941
MmeI	TCCRAC	4 cut(s)	961, 1091, 1219, 1317
Mox20I	TGGCCA	2 cut(s)	1008, 1941
Mph1103I	ATGCAT	1 cut(s)	1573
MroXI	GAANNNNTTC	3 cut(s)	85, 1178, 1284
MscI	TGGCCA	2 cut(s)	1008, 1941
MseI	TTAA	5 cut(s)	1149, 1434, 1716, 1793, 2115
MslI	CAYNNNNRTG	2 cut(s)	1314, 1532
Msp20I	TGGCCA	2 cut(s)	1008, 1941
MspA1I	CMGCKG	2 cut(s)	671, 1814
MspCI	CTTAAG	1 cut(s)	1148
MspR9I	CCNGG	8 cut(s)	73, 369, 513, 557, 834, 867, 1323, 2123
Mva1269I	GAATGC	1 cut(s)	979
MvaI	CCWGG	4 cut(s)	73, 369, 1323, 2123
MvnI	CGCG	2 cut(s)	1065, 1531
NciI	CCSGG	4 cut(s)	513, 557, 834, 867
NcoI	CCATGG	1 cut(s)	2060
NdeII	GATC	7 cut(s)	469, 983, 994, 1044, 1595, 1753, 1891
NlaIII	CATG	7 cut(s)	823, 1319, 1400, 1523, 1558, 1821, 2064
NlaIV	GGNNCC	8 cut(s)	10, 510, 517, 825, 1372, 1560, 1987, 2032
NmeAIII	GCCGAG	2 cut(s)	1645, 1738
NmuCI	GTSAC	4 cut(s)	207, 228, 698, 1733
NsiI	ATGCAT	1 cut(s)	1573
NspI	RCATGY	2 cut(s)	1319, 1821
OliI	CACNNNNGTG	1 cut(s)	1532
PaeI	GCATGC	2 cut(s)	1319, 1821
PaeR7I	CTCGAG	2 cut(s)	679, 2106
PaqCI	CACCTGC	1 cut(s)	220
PcsI	WCGNNNNNNNCGW	3 cut(s)	116, 269, 1128
PctI	GAATGC	1 cut(s)	979
PdmI	GAANNNNTTC	3 cut(s)	85, 1178, 1284
PfeI	GAWTC	9 cut(s)	17, 52, 383, 410, 989, 1460, 1727, 1965, 2096
PflMI	CCANNNNNTGG	1 cut(s)	884
PfoI	TCCNGGA	2 cut(s)	832, 1321
PinAI	ACCGGT	1 cut(s)	2027
PkrI	GCNGC	7 cut(s)	255, 508, 1146, 1810, 1813, 1816, 1994
PpuMI	RGGWCCY	1 cut(s)	2048
Psp124BI	GAGCTC	2 cut(s)	686, 1635
Psp5II	RGGWCCY	1 cut(s)	2048
Psp6I	CCWGG	4 cut(s)	71, 367, 1321, 2121
PspGI	CCWGG	4 cut(s)	71, 367, 1321, 2121
PspN4I	GGNNCC	8 cut(s)	10, 510, 517, 825, 1372, 1560, 1987, 2032
PspPI	GGNCC	5 cut(s)	371, 875, 914, 1371, 2048
PspPPI	RGGWCCY	1 cut(s)	2048
PspXI	VCTCGAGB	2 cut(s)	679, 2106
PstNI	CAGNNNCTG	2 cut(s)	710, 1814
PsuI	RGATCY	2 cut(s)	994, 1753
PvuII	CAGCTG	1 cut(s)	1814
RsaI	GTAC	5 cut(s)	709, 1017, 1553, 1924, 1946
RsaNI	GTAC	5 cut(s)	708, 1016, 1552, 1923, 1945
RseI	CAYNNNNRTG	2 cut(s)	1314, 1532
SacI	GAGCTC	2 cut(s)	686, 1635
SaqAI	TTAA	5 cut(s)	1149, 1434, 1716, 1793, 2115
SatI	GCNGC	7 cut(s)	254, 507, 1145, 1809, 1812, 1815, 1993
Sau3AI	GATC	7 cut(s)	469, 983, 994, 1044, 1595, 1753, 1891
Sau96I	GGNCC	5 cut(s)	371, 875, 914, 1371, 2048
ScrFI	CCNGG	8 cut(s)	73, 369, 513, 557, 834, 867, 1323, 2123
SduI	GDGCHC	4 cut(s)	686, 1308, 1635, 1702
SfaNI	GCATC	4 cut(s)	1104, 1222, 1257, 1580
SfcI	CTRYAG	1 cut(s)	1864
Sfr274I	CTCGAG	2 cut(s)	679, 2106
SinI	GGWCC	4 cut(s)	875, 914, 1371, 2048
SlaI	CTCGAG	2 cut(s)	679, 2106
SmiMI	CAYNNNNRTG	2 cut(s)	1314, 1532
SmlI	CTYRAG	8 cut(s)	679, 685, 1148, 1301, 1355, 1738, 1763, 2106
SmoI	CTYRAG	8 cut(s)	679, 685, 1148, 1301, 1355, 1738, 1763, 2106
SpeI	ACTAGT	1 cut(s)	1747
SphI	GCATGC	2 cut(s)	1319, 1821
Sse9I	AATT	7 cut(s)	814, 880, 1178, 1280, 1416, 1910, 2021
SspMI	CTAG	4 cut(s)	576, 1628, 1748, 2013
SstI	GAGCTC	2 cut(s)	686, 1635
StyD4I	CCNGG	8 cut(s)	71, 367, 511, 555, 832, 865, 1321, 2121
StyI	CCWWGG	2 cut(s)	750, 2060
TaaI	ACNGT	7 cut(s)	49, 273, 294, 453, 712, 727, 1880
TaiI	ACGT	1 cut(s)	947
TaqI	TCGA	7 cut(s)	620, 680, 1207, 1219, 1725, 1898, 2107
TasI	AATT	7 cut(s)	814, 880, 1178, 1280, 1416, 1910, 2021
TatI	WGTACW	1 cut(s)	1944
TauI	GCSGC	2 cut(s)	256, 509
TfiI	GAWTC	9 cut(s)	17, 52, 383, 410, 989, 1460, 1727, 1965, 2096
Tru1I	TTAA	5 cut(s)	1149, 1434, 1716, 1793, 2115
Tru9I	TTAA	5 cut(s)	1149, 1434, 1716, 1793, 2115
TscAI	CASTG	2 cut(s)	19, 2161
TseFI	GTSAC	4 cut(s)	207, 228, 698, 1733
TseI	GCWGC	5 cut(s)	1144, 1808, 1811, 1814, 1992
Tsp45I	GTSAC	4 cut(s)	207, 228, 698, 1733
TspDTI	ATGAA	6 cut(s)	78, 477, 986, 1293, 1413, 1526
TspGWI	ACGGA	2 cut(s)	1068, 1864
TspRI	CASTG	2 cut(s)	19, 2161
Van91I	CCANNNNNTGG	1 cut(s)	884
Vha464I	CTTAAG	1 cut(s)	1148
VpaK11BI	GGWCC	4 cut(s)	875, 914, 1371, 2048
XapI	RAATTY	5 cut(s)	880, 1178, 1280, 1910, 2021
XbaI	TCTAGA	1 cut(s)	1627
XceI	RCATGY	2 cut(s)	1319, 1821
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1534
XhoI	CTCGAG	2 cut(s)	679, 2106
XmiI	GTMKAC	1 cut(s)	1101
XmnI	GAANNNNTTC	3 cut(s)	85, 1178, 1284
XspI	CTAG	4 cut(s)	576, 1628, 1748, 2013
Zsp2I	ATGCAT	1 cut(s)	1573

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.