pycom13g08090

proline-rich receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr13
Physical Location & Seq
Forward (+)
5391008 .. 5393128
2121 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom13g08090.6

Sequence Viewer

Length: 1296 bp
ATGAGCTCAATAATTGATTCCGCAACTTCTGGTCCAACAGAAAGCTTCTATTCGAGTGGACCGCCCGGACCTTCCTCCTATGAAAACAGCTACCAAGGTAATCCGCCCAGTTCTGGAGATTCCGGTCTTATTGCTGCTACCAAGGTTCATTTCACCTACGAAGAGTTGATGGAGATAACGAATGGATTTTCACGTCAAAACGTTATCGGTGAGGGTGGTTTCGGATGTGTGTACAAGGGTTGGATGCCGGATGGAAGAGTTGTGGCAGTCAAGCAGCTCAAGGCTGGTAGCGGGCAGGGAGAGAAGGAATTCAGGGCTGAAGTTGAGATTATTAGTCGCGTGCACCATCGTTACTTGGTCTCTTTGGTGGGATACTGCATCTCTGAACAGCAAAGATTGCTTATCTATGAATTTGTTCCCAATAAAACTCTTGAGCACCATTTGCATGGTGCCGGAATGCCGGTGTTGGAATGGACCAAGAGACTGAAGATTGCTTTGGGGTCTGCAAAAGGCTTGGCGTATTTACACGAAGACTGCCATCCAAAGATTATTCACAGAGACATTAAATCGGCAAACATTCTGCTGGATGATGCCTTTGAAGCACAGGTTGCAGACTTTGGGCTTGCCAAACTTACAGACGGCACCAATACTCACGTATCCACTCGAGTCATGGGAACATTTGGGTACATGGCACCTGAGTATGCTAACAGTGGCAAATTGACAGACAGATCAGATGTGTTTTCGTTTGGAGTTGTGCTTCTAGAGCTTGTAACCGGGCGGAAACCCGTTGATTCTTCTCGACCTTTAGGGGATGAGAGTTTGGTTGAATGGGCTCGTCCCCTTCTAATTCAAGCCCTTGAAACTGGCGACTTGAGCAAATTAGTAGATCCTGGGCTTGAGAAGCATTATGTGGAGGGTGAAATGTTCAGAATGATCGAGGCAGCTGCTGCTTGCGTGCGTCACTCTGCTCCAAAACGACCACGAATGGCGCAGGTGGTGAGAGCATTGGACTGTGAAGGTGAATTAAGTGATCTAACGAACGGAGTGAAAGTTGGGCAGAGTACTGTATATGACTCTGGTCAGTACAATAAGGACATTATGAGATTCAGAAGGATGGCATTAGGCAGCGGAGGCAGCTCAGAGATGTCCAGTGCAGATTTCACTTCCAGAGAGGTATCAGGACCCCAAAGTTTATGGACTCGCCCGGATGCTTCAAGCGATGAATCAGAAACTCGAGCTTTTACCACGCGTGGTGGTGAGCAGATAATCAGTGGGAATCAAGGCAGACGGTTCTAA

Protein Analysis

432

Amino Acids

47.13

Weight (kDa)

5.89

Isoelectric Point (pI)

40.84

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 982
Acc36I ACCTGC 1 cut(s) 982
AccB1I GGYRCC 3 cut(s) 449, 641, 691
AccII CGCG 2 cut(s) 339, 1249
AciI CCGC 6 cut(s) 21, 62, 104, 291, 778, 1128
AclI AACGTT 1 cut(s) 201
AclWI GGATC 1 cut(s) 881
AcsI RAATTY 2 cut(s) 308, 410
AcuI CTGAAG 2 cut(s) 339, 506
AfaI GTAC 4 cut(s) 233, 686, 1063, 1085
AfiI CCNNNNNNNGG 1 cut(s) 113
AflIII ACRYGT 1 cut(s) 1247
AgsI TTSAA 5 cut(s) 599, 827, 851, 860, 1215
AjiI CACGTC 1 cut(s) 194
AjnI CCWGG 1 cut(s) 889
AjuI GAANNNNNNNTTGG 4 cut(s) 134, 166, 479, 511
AluBI AGCT 8 cut(s) 6, 45, 90, 277, 766, 944, 1137, 1238
AluI AGCT 8 cut(s) 6, 45, 90, 277, 766, 944, 1137, 1238
Alw21I GWGCWC 3 cut(s) 8, 345, 438
Alw26I GTCTC 3 cut(s) 364, 475, 552
Alw44I GTGCAC 1 cut(s) 341
AlwI GGATC 1 cut(s) 881
AlwNI CAGNNNCTG 1 cut(s) 947
Ama87I CYCGRG 2 cut(s) 663, 1233
ApaLI GTGCAC 1 cut(s) 341
ApeKI GCWGC 7 cut(s) 134, 274, 941, 944, 947, 1125, 1134
ApoI RAATTY 2 cut(s) 308, 410
Asp700I GAANNNNTTC 2 cut(s) 308, 414
AspLEI GCGC 1 cut(s) 991
AspS9I GGNCC 5 cut(s) 32, 59, 68, 474, 1181
AsuC2I CCSGG 3 cut(s) 66, 775, 1205
AsuHPI GGTGA 6 cut(s) 145, 221, 929, 1009, 1031, 1268
AvaI CYCGRG 2 cut(s) 663, 1233
AvaII GGWCC 5 cut(s) 32, 59, 68, 474, 1181
BaeGI GKGCMC 1 cut(s) 345
BaeI ACNNNNGTAYC 2 cut(s) 639, 672
BanI GGYRCC 3 cut(s) 449, 641, 691
BanII GRGCYC 2 cut(s) 8, 835
BbsI GAAGAC 1 cut(s) 537
Bbv12I GWGCWC 3 cut(s) 8, 345, 438
BbvI GCAGC 7 cut(s) 121, 286, 931, 934, 953, 1137, 1146
BccI CCATC 5 cut(s) 163, 245, 354, 546, 1108
BceAI ACGGC 1 cut(s) 655
BcgI CGANNNNNNTGC 2 cut(s) 926, 960
BciT130I CCWGG 1 cut(s) 891
BciVI GTATCC 2 cut(s) 365, 667
BcnI CCSGG 3 cut(s) 66, 775, 1205
BcoDI GTCTC 3 cut(s) 364, 475, 552
BfaI CTAG 1 cut(s) 761
BfuAI ACCTGC 1 cut(s) 982
BfuI GTATCC 2 cut(s) 365, 667
BisI GCNGC 7 cut(s) 135, 275, 942, 945, 948, 1126, 1135
BlsI GCNGC 7 cut(s) 136, 276, 943, 946, 949, 1127, 1136
BmcAI AGTACT 1 cut(s) 1063
Bme1390I CCNGG 4 cut(s) 66, 775, 891, 1205
Bme18I GGWCC 5 cut(s) 32, 59, 68, 474, 1181
BmeT110I CYCGRG 2 cut(s) 663, 1233
BmgBI CACGTC 1 cut(s) 194
BmgT120I GGNCC 5 cut(s) 32, 59, 68, 474, 1181
BmiI GGNNCC 4 cut(s) 451, 643, 693, 1183
BmrFI CCNGG 4 cut(s) 66, 775, 891, 1205
BmrI ACTGGG 1 cut(s) 102
BmsI GCATC 4 cut(s) 234, 387, 580, 1198
BmuI ACTGGG 1 cut(s) 102
BoxI GACNNNNGTC 1 cut(s) 1077
BpiI GAAGAC 1 cut(s) 537
BpmI CTGGAG 1 cut(s) 135
BpuEI CTTGAG 4 cut(s) 263, 452, 892, 917
BpuMI CCSGG 3 cut(s) 66, 775, 1205
BsaAI YACGTR 1 cut(s) 655
BsaI GGTCTC 1 cut(s) 364
BsaJI CCNNGG 3 cut(s) 94, 141, 890
BsaWI WCCGGW 1 cut(s) 122
BsaXI ACNNNNNCTCC 2 cut(s) 1035, 1065
Bsc4I CCNNNNNNNGG 1 cut(s) 113
Bse118I RCCGGY 1 cut(s) 460
Bse1I ACTGG 3 cut(s) 108, 868, 1149
BseBI CCWGG 1 cut(s) 891
BseDI CCNNGG 3 cut(s) 94, 141, 890
BseGI GGATG 8 cut(s) 230, 249, 256, 538, 592, 817, 1119, 1213
BseLI CCNNNNNNNGG 1 cut(s) 113
BseMII CTCAG 2 cut(s) 687, 1152
BseNI ACTGG 3 cut(s) 108, 868, 1149
BseSI GKGCMC 1 cut(s) 345
BseXI GCAGC 7 cut(s) 121, 286, 931, 934, 953, 1137, 1146
BsgI GTGCAG 1 cut(s) 1173
Bsh1236I CGCG 2 cut(s) 339, 1249
BshNI GGYRCC 3 cut(s) 449, 641, 691
BsiHKAI GWGCWC 3 cut(s) 8, 345, 438
BsiHKCI CYCGRG 2 cut(s) 663, 1233
BsiSI CCGG 7 cut(s) 66, 123, 248, 453, 461, 774, 1205
BslFI GGGAC 1 cut(s) 822
BslI CCNNNNNNNGG 1 cut(s) 113
BsmAI GTCTC 3 cut(s) 364, 475, 552
BsmFI GGGAC 1 cut(s) 822
BsmI GAATGC 1 cut(s) 462
Bso31I GGTCTC 1 cut(s) 364
BsoBI CYCGRG 2 cut(s) 663, 1233
Bsp1286I GDGCHC 4 cut(s) 8, 345, 438, 835
Bsp1407I TGTACA 1 cut(s) 231
Bsp143I GATC 4 cut(s) 728, 886, 933, 1030
BspACI CCGC 6 cut(s) 21, 62, 104, 291, 778, 1128
BspCNI CTCAG 2 cut(s) 688, 1151
BspFNI CGCG 2 cut(s) 339, 1249
BspLI GGNNCC 4 cut(s) 451, 643, 693, 1183
BspMI ACCTGC 1 cut(s) 982
BspPI GGATC 1 cut(s) 881
BspT107I GGYRCC 3 cut(s) 449, 641, 691
BspTNI GGTCTC 1 cut(s) 364
BsrFI RCCGGY 1 cut(s) 460
BsrGI TGTACA 1 cut(s) 231
BsrI ACTGG 3 cut(s) 108, 868, 1149
BssAI RCCGGY 1 cut(s) 460
BssECI CCNNGG 3 cut(s) 94, 141, 890
BssMI GATC 4 cut(s) 728, 886, 933, 1030
BssT1I CCWWGG 2 cut(s) 94, 141
Bst2UI CCWGG 1 cut(s) 891
Bst4CI ACNGT 4 cut(s) 710, 1013, 1066, 1290
Bst6I CTCTTC 2 cut(s) 156, 250
BstAPI GCANNNNNTGC 4 cut(s) 397, 442, 608, 947
BstAUI TGTACA 1 cut(s) 231
BstBAI YACGTR 1 cut(s) 655
BstC8I GCNNGC 5 cut(s) 293, 341, 624, 952, 956
BstDEI CTNAG 2 cut(s) 696, 1138
BstF5I GGATG 8 cut(s) 230, 249, 256, 538, 592, 817, 1119, 1213
BstFNI CGCG 2 cut(s) 339, 1249
BstHHI GCGC 1 cut(s) 991
BstKTI GATC 4 cut(s) 731, 889, 936, 1033
BstMAI GTCTC 3 cut(s) 364, 475, 552
BstMBI GATC 4 cut(s) 728, 886, 933, 1030
BstNI CCWGG 1 cut(s) 891
BstPAI GACNNNNGTC 1 cut(s) 1077
BstSCI CCNGG 4 cut(s) 64, 773, 889, 1203
BstSLI GKGCMC 1 cut(s) 345
BstUI CGCG 2 cut(s) 339, 1249
BstV1I GCAGC 7 cut(s) 121, 286, 931, 934, 953, 1137, 1146
BstV2I GAAGAC 1 cut(s) 537
BstX2I RGATCY 1 cut(s) 886
BstXI CCANNNNNNTGG 1 cut(s) 446
BstYI RGATCY 1 cut(s) 886
BsuI GTATCC 2 cut(s) 365, 667
BtgZI GCGATG 1 cut(s) 1233
BtrI CACGTC 1 cut(s) 194
BtsCI GGATG 8 cut(s) 230, 249, 256, 538, 592, 817, 1119, 1213
BtsIMutI CAGTG 3 cut(s) 715, 1156, 1276
BveI ACCTGC 1 cut(s) 982
Cac8I GCNNGC 5 cut(s) 293, 341, 624, 952, 956
CaiI CAGNNNCTG 1 cut(s) 947
CfoI GCGC 1 cut(s) 991
Cfr10I RCCGGY 1 cut(s) 460
Cfr13I GGNCC 5 cut(s) 32, 59, 68, 474, 1181
CseI GACGC 1 cut(s) 947
Csp6I GTAC 4 cut(s) 232, 685, 1062, 1084
CviAII CATG 3 cut(s) 446, 670, 688
CviQI GTAC 4 cut(s) 232, 685, 1062, 1084
DdeI CTNAG 2 cut(s) 696, 1138
DpnI GATC 4 cut(s) 730, 888, 935, 1032
DpnII GATC 4 cut(s) 728, 886, 933, 1030
Eam1104I CTCTTC 2 cut(s) 156, 250
EarI CTCTTC 2 cut(s) 156, 250
EciI GGCGGA 2 cut(s) 93, 793
Ecl136II GAGCTC 1 cut(s) 6
Eco130I CCWWGG 2 cut(s) 94, 141
Eco24I GRGCYC 2 cut(s) 8, 835
Eco31I GGTCTC 1 cut(s) 364
Eco47I GGWCC 5 cut(s) 32, 59, 68, 474, 1181
Eco53kI GAGCTC 1 cut(s) 6
Eco57I CTGAAG 2 cut(s) 339, 506
Eco88I CYCGRG 2 cut(s) 663, 1233
EcoICRI GAGCTC 1 cut(s) 6
EcoO109I RGGNCCY 1 cut(s) 1181
EcoRI GAATTC 1 cut(s) 308
EcoRII CCWGG 1 cut(s) 889
EcoT14I CCWWGG 2 cut(s) 94, 141
EcoT38I GRGCYC 2 cut(s) 8, 835
ErhI CCWWGG 2 cut(s) 94, 141
FaeI CATG 3 cut(s) 449, 673, 691
FaqI GGGAC 1 cut(s) 822
FatI CATG 3 cut(s) 445, 669, 687
FauI CCCGC 1 cut(s) 284
Fnu4HI GCNGC 7 cut(s) 135, 275, 942, 945, 948, 1126, 1135
FokI GGATG 8 cut(s) 237, 256, 263, 525, 599, 824, 1126, 1220
FriOI GRGCYC 2 cut(s) 8, 835
Fsp4HI GCNGC 7 cut(s) 135, 275, 942, 945, 948, 1126, 1135
FspBI CTAG 1 cut(s) 761
GlaI GCGC 1 cut(s) 990
GluI GCNGC 7 cut(s) 135, 275, 942, 945, 948, 1126, 1135
GsuI CTGGAG 1 cut(s) 135
HapII CCGG 7 cut(s) 66, 123, 248, 453, 461, 774, 1205
HgaI GACGC 1 cut(s) 947
HhaI GCGC 1 cut(s) 991
Hin1II CATG 3 cut(s) 449, 673, 691
Hin6I GCGC 1 cut(s) 989
HinP1I GCGC 1 cut(s) 989
HindIII AAGCTT 1 cut(s) 43
HinfI GANTC 9 cut(s) 17, 119, 666, 791, 1073, 1104, 1198, 1223, 1276
HpaII CCGG 7 cut(s) 66, 123, 248, 453, 461, 774, 1205
HphI GGTGA 6 cut(s) 145, 221, 929, 1009, 1031, 1268
Hpy166II GTNNAC 3 cut(s) 59, 232, 343
Hpy188I TCNGA 7 cut(s) 224, 385, 733, 929, 1109, 1141, 1228
Hpy188III TCNNGA 6 cut(s) 114, 431, 761, 798, 1167, 1179
Hpy8I GTNNAC 3 cut(s) 59, 232, 343
HpyAV CCTTC 5 cut(s) 81, 298, 851, 1010, 1104
HpyCH4III ACNGT 4 cut(s) 710, 1013, 1066, 1290
HpyCH4IV ACGT 3 cut(s) 193, 201, 654
HpyCH4V TGCA 6 cut(s) 343, 378, 445, 506, 611, 1154
HpyF3I CTNAG 2 cut(s) 696, 1138
HpySE526I ACGT 3 cut(s) 193, 201, 654
Hsp92II CATG 3 cut(s) 449, 673, 691
HspAI GCGC 1 cut(s) 989
Kzo9I GATC 4 cut(s) 728, 886, 933, 1030
LmnI GCTCC 1 cut(s) 973
Lsp1109I GCAGC 7 cut(s) 121, 286, 931, 934, 953, 1137, 1146
LweI GCATC 4 cut(s) 234, 387, 580, 1198
MaeI CTAG 1 cut(s) 761
MaeII ACGT 3 cut(s) 193, 201, 654
MaeIII GTNAC 3 cut(s) 350, 769, 959
MalI GATC 4 cut(s) 730, 888, 935, 1032
MboI GATC 4 cut(s) 728, 886, 933, 1030
MboII GAAGA 5 cut(s) 173, 267, 499, 542, 786
MflI RGATCY 1 cut(s) 886
MhlI GDGCHC 4 cut(s) 8, 345, 438, 835
MluCI AATT 7 cut(s) 12, 308, 410, 716, 846, 878, 1022
MluI ACGCGT 1 cut(s) 1247
MlyI GAGTC 3 cut(s) 675, 1067, 1192
MmeI TCCRAC 3 cut(s) 59, 221, 447
MnlI CCTC 6 cut(s) 85, 205, 907, 931, 1124, 1165
MroXI GAANNNNTTC 2 cut(s) 308, 414
MseI TTAA 2 cut(s) 564, 1025
MslI CAYNNNNRTG 1 cut(s) 444
MspA1I CMGCKG 2 cut(s) 944, 1128
MspI CCGG 7 cut(s) 66, 123, 248, 453, 461, 774, 1205
MspR9I CCNGG 4 cut(s) 66, 775, 891, 1205
Mva1269I GAATGC 1 cut(s) 462
MvaI CCWGG 1 cut(s) 891
MvnI CGCG 2 cut(s) 339, 1249
NciI CCSGG 3 cut(s) 66, 775, 1205
NdeII GATC 4 cut(s) 728, 886, 933, 1030
NlaIII CATG 3 cut(s) 449, 673, 691
NlaIV GGNNCC 4 cut(s) 451, 643, 693, 1183
NmuCI GTSAC 1 cut(s) 959
PaeR7I CTCGAG 2 cut(s) 663, 1233
PaqCI CACCTGC 1 cut(s) 982
PctI GAATGC 1 cut(s) 462
PdmI GAANNNNTTC 2 cut(s) 308, 414
PfeI GAWTC 6 cut(s) 17, 119, 791, 1104, 1223, 1276
PkrI GCNGC 7 cut(s) 136, 276, 943, 946, 949, 1127, 1136
PleI GAGTC 3 cut(s) 674, 1067, 1192
PpsI GAGTC 3 cut(s) 674, 1067, 1192
Ppu21I YACGTR 1 cut(s) 655
PpuMI RGGWCCY 1 cut(s) 1181
PshAI GACNNNNGTC 1 cut(s) 1077
Psp124BI GAGCTC 1 cut(s) 8
Psp1406I AACGTT 1 cut(s) 201
Psp5II RGGWCCY 1 cut(s) 1181
Psp6I CCWGG 1 cut(s) 889
PspGI CCWGG 1 cut(s) 889
PspN4I GGNNCC 4 cut(s) 451, 643, 693, 1183
PspPI GGNCC 5 cut(s) 32, 59, 68, 474, 1181
PspPPI RGGWCCY 1 cut(s) 1181
PspXI VCTCGAGB 2 cut(s) 663, 1233
PstNI CAGNNNCTG 1 cut(s) 947
PsuI RGATCY 1 cut(s) 886
PvuII CAGCTG 1 cut(s) 944
RsaI GTAC 4 cut(s) 233, 686, 1063, 1085
RsaNI GTAC 4 cut(s) 232, 685, 1062, 1084
RseI CAYNNNNRTG 1 cut(s) 444
SacI GAGCTC 1 cut(s) 8
SaqAI TTAA 2 cut(s) 564, 1025
SatI GCNGC 7 cut(s) 135, 275, 942, 945, 948, 1126, 1135
Sau3AI GATC 4 cut(s) 728, 886, 933, 1030
Sau96I GGNCC 5 cut(s) 32, 59, 68, 474, 1181
ScaI AGTACT 1 cut(s) 1063
SchI GAGTC 3 cut(s) 675, 1067, 1192
ScrFI CCNGG 4 cut(s) 66, 775, 891, 1205
SduI GDGCHC 4 cut(s) 8, 345, 438, 835
SfaNI GCATC 4 cut(s) 234, 387, 580, 1198
Sfr274I CTCGAG 2 cut(s) 663, 1233
SinI GGWCC 5 cut(s) 32, 59, 68, 474, 1181
SlaI CTCGAG 2 cut(s) 663, 1233
SmiMI CAYNNNNRTG 1 cut(s) 444
SmlI CTYRAG 6 cut(s) 278, 431, 663, 871, 896, 1233
SmoI CTYRAG 6 cut(s) 278, 431, 663, 871, 896, 1233
Sse9I AATT 7 cut(s) 12, 308, 410, 716, 846, 878, 1022
SsiI CCGC 6 cut(s) 21, 62, 104, 291, 778, 1128
SspMI CTAG 1 cut(s) 761
SstI GAGCTC 1 cut(s) 8
StyD4I CCNGG 4 cut(s) 64, 773, 889, 1203
StyI CCWWGG 2 cut(s) 94, 141
TaaI ACNGT 4 cut(s) 710, 1013, 1066, 1290
TaiI ACGT 3 cut(s) 196, 204, 657
TaqI TCGA 5 cut(s) 53, 664, 799, 936, 1234
TasI AATT 7 cut(s) 12, 308, 410, 716, 846, 878, 1022
TatI WGTACW 3 cut(s) 231, 1061, 1083
TfiI GAWTC 6 cut(s) 17, 119, 791, 1104, 1223, 1276
Tru1I TTAA 2 cut(s) 564, 1025
Tru9I TTAA 2 cut(s) 564, 1025
TscAI CASTG 3 cut(s) 715, 1156, 1276
TseFI GTSAC 1 cut(s) 959
TseI GCWGC 7 cut(s) 134, 274, 941, 944, 947, 1125, 1134
Tsp45I GTSAC 1 cut(s) 959
TspDTI ATGAA 4 cut(s) 96, 137, 423, 1236
TspGWI ACGGA 1 cut(s) 1056
TspRI CASTG 3 cut(s) 715, 1156, 1276
VneI GTGCAC 1 cut(s) 341
VpaK11BI GGWCC 5 cut(s) 32, 59, 68, 474, 1181
XapI RAATTY 2 cut(s) 308, 410
XbaI TCTAGA 1 cut(s) 760
XcmI CCANNNNNNNNNTGG 1 cut(s) 667
XhoI CTCGAG 2 cut(s) 663, 1233
XmnI GAANNNNTTC 2 cut(s) 308, 414
XspI CTAG 1 cut(s) 761
ZrmI AGTACT 1 cut(s) 1063
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.