Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0008191

Physical Location & Seq

Genomic Coordinates Forward (+)

26552576 .. 26554559

Gene Structure 1984 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G70450.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1185 bp

ATGTGGAGATTAAAGAATCAGAAGAAGAAAGAAACGGCAGATTCGCCGAGTTCTTCTCCAACAGCACCGTCAGTCGATTCAGCGGTGATGGGAAGTGGTCAGACTCATTTTACCTATGAAGAGCTAGAGGACATAACAGAAGGGTTTTCTAAGCAAAACATACTTGGAGAAGGAGGTTTTGGTTGTGTCTACAAAGGTAAACTAAAAGATGGAAAACTTGTTGCTGTTAAGCAGCTTAAGGTTGGTAGCGGACAAGGAGACCGTGAGTTTAAGGCGGAGGTTGAGATTATTAGCCGTGTTCATCATCGCCATTTGGTATCGCTTGTTGGATACTGCATTGCGGATTCAGAGAGATTGCTTATCTATGAGTATGTTCCTAACCAAACATTGGAGCATCATTTGCATGGGAAGGGTAGGCCAGTGCTTGAATGGGCTAGGAGAGTCAGAATCGCTATAGTTCTGCCAAAGGTTTGGCGTATTTGCACGAAGACTGTAAGTCACCCAAAAATCATTCACAGGGACATAAAGTCCGCTAACATCTTGCTGGACGATGAGTTTGAAGTTCAGGTTGCTGACTTTGGACTTGCCAAAGTCAATGATACAACACAAACTCATGTCTCAACTCGCGTTATGGGAACCTTCGGGTACTTGGCACCAGAATATGCACAAAGTGGACAACTTACTGATAGATCAGATGTTTTCTCGTTTGGAGTTGTTCTCTTAGAGCTTATAACTGGACGCAAACCTGTTGACCGGAACCAGCCTTTGGGAGAAGAGAGTTTGGTTGGATGGGCTCGTCCACTACTTAAAAAAGCCATTGAGACCGGTGATTTCAGTGAACTAGTTGATAGACGGCTCGAAAAGCATTACGTGAAGAATGAAGTTTTCAGAATGATTGAAACGGCTGCTGCTTGTGTTAGGTATTCAGGTCCAAAACGTCCACGCATGGTTCAGGTTTTGAGAGCACTAGATAGTGAAGGAGACATGGGAGATATCTGCAATGGAATCAAAGTGGGACAAAGCAGTACTTGTGACGACTCTGGTCAGAATCATAGTGTGATAAAGGACGTCGGGTCTATAGGAAGAGGAGGAATGGTGGTATCAGGGGTGAGGGTGGTCACACGTTTGATGGTTGATGCTTATCATAATCGGCACGAGGGAAAGAAAGCAGAGAGAAGAATCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005488 GO:0005515 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0019899 GO:0019900 GO:0019901 GO:0023052 GO:0032502 GO:0036211 GO:0038023 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060089 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase Pkinase_Tyr

Protein Analysis

394

Amino Acids

43.9

Weight (kDa)

8.96

Isoelectric Point (pI)

34.63

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	50 - 254	2.6e-40	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	52 - 322	3.6e-41	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008191)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G10620 AT1G23540 AT1G23540 AT1G70450 AT1G70460
fragaria_vesca	FvH4_4g34330
malus_domestica	MD13G1092900.v1.1 MD16G1093800.v1.1
prunus_persica	Prupe.1G252700_v2.0.a1 Prupe.1G252700_v2.0.a1 Prupe.1G252700_v2.0.a1
pyrus_communis	pycom13g08090
rosa_chinensis	RchiOBHm_Chr4g0443751
rosa_laevigata	RLG00000005893
rosa_multiflora	Rmu_co8490185.1_g000001 Rmu_sc0001426.1_g000001
rosa_roxburghii	Rroxscaffold_5G00384320
rosa_rugosa	Rorug04G0347100
rosa_samantha	Rh4AG407200 Rh4BG418100 Rh4CG432300 Rh4DG413400
rosa_wichuraiana	Rw4G034970

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	731
AatII	GACGTC	1 cut(s)	1071
AccB1I	GGYRCC	1 cut(s)	652
AccB7I	CCANNNNNTGG	2 cut(s)	388, 766
AccI	GTMKAC	1 cut(s)	189
AccII	CGCG	1 cut(s)	627
AciI	CCGC	5 cut(s)	83, 249, 275, 341, 531
AcyI	GRCGYC	1 cut(s)	1068
AdeI	CACNNNGTG	1 cut(s)	671
AfaI	GTAC	2 cut(s)	647, 1027
AfiI	CCNNNNNNNGG	2 cut(s)	388, 766
AflII	CTTAAG	1 cut(s)	236
AflIII	ACRYGT	1 cut(s)	1121
AgeI	ACCGGT	1 cut(s)	824
AgsI	TTSAA	3 cut(s)	428, 560, 899
AhdI	GACNNNNNGTC	3 cut(s)	495, 526, 1072
AhlI	ACTAGT	1 cut(s)	841
AjuI	GAANNNNNNNTTGG	4 cut(s)	162, 194, 749, 781
AluBI	AGCT	3 cut(s)	124, 235, 727
AluI	AGCT	3 cut(s)	124, 235, 727
Alw21I	GWGCWC	1 cut(s)	967
Alw26I	GTCTC	4 cut(s)	252, 622, 815, 975
AoxI	GGCC	1 cut(s)	416
ApeKI	GCWGC	3 cut(s)	232, 905, 908
ArsI	GACNNNNNNTTYG	2 cut(s)	539, 571
AsiGI	ACCGGT	1 cut(s)	824
AspS9I	GGNCC	1 cut(s)	929
AsuHPI	GGTGA	4 cut(s)	97, 491, 839, 1120
AvaII	GGWCC	1 cut(s)	929
BanI	GGYRCC	1 cut(s)	652
BanII	GRGCYC	1 cut(s)	796
BauI	CACGAG	1 cut(s)	1154
BbsI	GAAGAC	1 cut(s)	494
Bbv12I	GWGCWC	1 cut(s)	967
BbvI	GCAGC	3 cut(s)	244, 892, 895
BccI	CCATC	4 cut(s)	82, 203, 783, 1123
BceAI	ACGGC	4 cut(s)	51, 279, 869, 918
BciVI	GTATCC	1 cut(s)	323
BcoDI	GTCTC	4 cut(s)	252, 622, 815, 975
BcuI	ACTAGT	1 cut(s)	841
BfaI	CTAG	4 cut(s)	125, 435, 842, 968
BfmI	CTRYAG	2 cut(s)	453, 1077
BfrI	CTTAAG	1 cut(s)	236
BfuI	GTATCC	1 cut(s)	323
BisI	GCNGC	3 cut(s)	233, 906, 909
BlsI	GCNGC	3 cut(s)	234, 907, 910
BmcAI	AGTACT	1 cut(s)	1027
Bme18I	GGWCC	1 cut(s)	929
BmeRI	GACNNNNNGTC	3 cut(s)	495, 526, 1072
BmgT120I	GGNCC	1 cut(s)	929
BmiI	GGNNCC	3 cut(s)	637, 654, 758
BmsI	GCATC	2 cut(s)	403, 1126
BoxI	GACNNNNGTC	1 cut(s)	1041
BpiI	GAAGAC	1 cut(s)	494
BplI	GAGNNNNNCTC	4 cut(s)	40, 72, 702, 734
BsaAI	YACGTR	1 cut(s)	871
BsaBI	GATNNNNATC	1 cut(s)	1140
BsaHI	GRCGYC	1 cut(s)	1068
BsaI	GGTCTC	2 cut(s)	252, 815
BsaWI	WCCGGW	2 cut(s)	753, 824
BsaXI	ACNNNNNCTCC	2 cut(s)	1080, 1110
Bsc4I	CCNNNNNNNGG	2 cut(s)	388, 766
Bse118I	RCCGGY	1 cut(s)	824
Bse1I	ACTGG	2 cut(s)	419, 739
Bse3DI	GCAATG	2 cut(s)	336, 1006
Bse8I	GATNNNNATC	1 cut(s)	1140
BseGI	GGATG	1 cut(s)	794
BseJI	GATNNNNATC	1 cut(s)	1140
BseLI	CCNNNNNNNGG	2 cut(s)	388, 766
BseMI	GCAATG	2 cut(s)	336, 1006
BseNI	ACTGG	2 cut(s)	419, 739
BseRI	GAGGAG	1 cut(s)	1101
BseXI	GCAGC	3 cut(s)	244, 892, 895
Bsh1236I	CGCG	1 cut(s)	627
BshFI	GGCC	1 cut(s)	418
BshNI	GGYRCC	1 cut(s)	652
BshTI	ACCGGT	1 cut(s)	824
BsiHKAI	GWGCWC	1 cut(s)	967
BsiSI	CCGG	2 cut(s)	754, 825
BslFI	GGGAC	2 cut(s)	533, 1029
BslI	CCNNNNNNNGG	2 cut(s)	388, 766
BsmAI	GTCTC	4 cut(s)	252, 622, 815, 975
BsmFI	GGGAC	2 cut(s)	533, 1029
BsnI	GGCC	1 cut(s)	418
Bso31I	GGTCTC	2 cut(s)	252, 815
Bsp1286I	GDGCHC	2 cut(s)	796, 967
Bsp143I	GATC	1 cut(s)	689
BspACI	CCGC	5 cut(s)	83, 249, 275, 341, 531
BspANI	GGCC	1 cut(s)	418
BspFNI	CGCG	1 cut(s)	627
BspLI	GGNNCC	3 cut(s)	637, 654, 758
BspQI	GCTCTTC	1 cut(s)	114
BspT107I	GGYRCC	1 cut(s)	652
BspTI	CTTAAG	1 cut(s)	236
BspTNI	GGTCTC	2 cut(s)	252, 815
BsrDI	GCAATG	2 cut(s)	336, 1006
BsrFI	RCCGGY	1 cut(s)	824
BsrI	ACTGG	2 cut(s)	419, 739
BssAI	RCCGGY	1 cut(s)	824
BssMI	GATC	1 cut(s)	689
BssNI	GRCGYC	1 cut(s)	1068
BssSI	CACGAG	1 cut(s)	1154
Bst2BI	CACGAG	1 cut(s)	1154
Bst4CI	ACNGT	3 cut(s)	69, 263, 493
Bst6I	CTCTTC	3 cut(s)	114, 768, 1078
BstACI	GRCGYC	1 cut(s)	1068
BstAFI	CTTAAG	1 cut(s)	236
BstAPI	GCANNNNNTGC	1 cut(s)	400
BstBAI	YACGTR	1 cut(s)	871
BstDEI	CTNAG	2 cut(s)	150, 721
BstF5I	GGATG	1 cut(s)	794
BstFNI	CGCG	1 cut(s)	627
BstKTI	GATC	1 cut(s)	692
BstMAI	GTCTC	4 cut(s)	252, 622, 815, 975
BstMBI	GATC	1 cut(s)	689
BstMWI	GCNNNNNNNGC	2 cut(s)	400, 862
BstPAI	GACNNNNGTC	1 cut(s)	1041
BstSFI	CTRYAG	2 cut(s)	453, 1077
BstUI	CGCG	1 cut(s)	627
BstV1I	GCAGC	3 cut(s)	244, 892, 895
BstV2I	GAAGAC	1 cut(s)	494
BstXI	CCANNNNNNTGG	1 cut(s)	471
BsuI	GTATCC	1 cut(s)	323
BsuRI	GGCC	1 cut(s)	418
BtgZI	GCGATG	1 cut(s)	290
BtsCI	GGATG	1 cut(s)	794
BtsIMutI	CAGTG	2 cut(s)	426, 841
Cfr10I	RCCGGY	1 cut(s)	824
Cfr13I	GGNCC	1 cut(s)	929
CseI	GACGC	1 cut(s)	747
Csp6I	GTAC	2 cut(s)	646, 1026
CspAI	ACCGGT	1 cut(s)	824
CviAII	CATG	4 cut(s)	404, 614, 946, 985
CviQI	GTAC	2 cut(s)	646, 1026
DdeI	CTNAG	2 cut(s)	150, 721
DpnI	GATC	1 cut(s)	691
DpnII	GATC	1 cut(s)	689
DraIII	CACNNNGTG	1 cut(s)	671
DriI	GACNNNNNGTC	3 cut(s)	495, 526, 1072
Eam1104I	CTCTTC	3 cut(s)	114, 768, 1078
Eam1105I	GACNNNNNGTC	3 cut(s)	495, 526, 1072
EarI	CTCTTC	3 cut(s)	114, 768, 1078
EciI	GGCGGA	1 cut(s)	290
Eco24I	GRGCYC	1 cut(s)	796
Eco31I	GGTCTC	2 cut(s)	252, 815
Eco32I	GATATC	1 cut(s)	994
Eco47I	GGWCC	1 cut(s)	929
EcoRV	GATATC	1 cut(s)	994
EcoT38I	GRGCYC	1 cut(s)	796
FaeI	CATG	4 cut(s)	407, 617, 949, 988
FalI	AAGNNNNNCTT	2 cut(s)	1012, 1044
FaqI	GGGAC	2 cut(s)	533, 1029
FatI	CATG	4 cut(s)	403, 613, 945, 984
FblI	GTMKAC	1 cut(s)	189
Fnu4HI	GCNGC	3 cut(s)	233, 906, 909
FokI	GGATG	1 cut(s)	801
FriOI	GRGCYC	1 cut(s)	796
Fsp4HI	GCNGC	3 cut(s)	233, 906, 909
FspBI	CTAG	4 cut(s)	125, 435, 842, 968
GluI	GCNGC	3 cut(s)	233, 906, 909
HaeIII	GGCC	1 cut(s)	418
HapII	CCGG	2 cut(s)	754, 825
HgaI	GACGC	1 cut(s)	747
Hin1I	GRCGYC	1 cut(s)	1068
Hin1II	CATG	4 cut(s)	407, 617, 949, 988
HincII	GTYRAC	1 cut(s)	751
HindII	GTYRAC	1 cut(s)	751
HpaII	CCGG	2 cut(s)	754, 825
HphI	GGTGA	4 cut(s)	97, 491, 839, 1120
Hpy166II	GTNNAC	7 cut(s)	190, 200, 674, 751, 800, 839, 941
Hpy188I	TCNGA	8 cut(s)	21, 102, 349, 446, 694, 890, 1047, 1184
Hpy8I	GTNNAC	7 cut(s)	190, 200, 674, 751, 800, 839, 941
Hpy99I	CGWCG	1 cut(s)	1073
HpyAV	CCTTC	5 cut(s)	134, 164, 403, 649, 971
HpyCH4III	ACNGT	3 cut(s)	69, 263, 493
HpyCH4IV	ACGT	4 cut(s)	870, 937, 1068, 1123
HpyCH4V	TGCA	5 cut(s)	336, 403, 483, 665, 999
HpyF10VI	GCNNNNNNNGC	2 cut(s)	400, 862
HpyF3I	CTNAG	2 cut(s)	150, 721
HpySE526I	ACGT	4 cut(s)	870, 937, 1068, 1123
Hsp92I	GRCGYC	1 cut(s)	1068
Hsp92II	CATG	4 cut(s)	407, 617, 949, 988
Kzo9I	GATC	1 cut(s)	689
LguI	GCTCTTC	1 cut(s)	114
LmnI	GCTCC	1 cut(s)	391
Lsp1109I	GCAGC	3 cut(s)	244, 892, 895
LweI	GCATC	2 cut(s)	403, 1126
MaeI	CTAG	4 cut(s)	125, 435, 842, 968
MaeII	ACGT	4 cut(s)	870, 937, 1068, 1123
MaeIII	GTNAC	3 cut(s)	497, 1031, 1117
MalI	GATC	1 cut(s)	691
MboI	GATC	1 cut(s)	689
MboII	GAAGA	8 cut(s)	34, 37, 45, 131, 499, 785, 886, 1095
MhlI	GDGCHC	2 cut(s)	796, 967
MlyI	GAGTC	3 cut(s)	97, 450, 1031
MmeI	TCCRAC	3 cut(s)	83, 307, 766
MnlI	CCTC	7 cut(s)	121, 167, 271, 1079, 1082, 1104, 1150
MseI	TTAA	5 cut(s)	11, 228, 237, 270, 807
MslI	CAYNNNNRTG	1 cut(s)	402
MspA1I	CMGCKG	1 cut(s)	83
MspCI	CTTAAG	1 cut(s)	236
MspI	CCGG	2 cut(s)	754, 825
MvnI	CGCG	1 cut(s)	627
MwoI	GCNNNNNNNGC	2 cut(s)	400, 862
NdeII	GATC	1 cut(s)	689
NlaIII	CATG	4 cut(s)	407, 617, 949, 988
NlaIV	GGNNCC	3 cut(s)	637, 654, 758
NmeAIII	GCCGAG	1 cut(s)	72
NmuCI	GTSAC	3 cut(s)	497, 1031, 1117
PciSI	GCTCTTC	1 cut(s)	114
PfeI	GAWTC	8 cut(s)	16, 41, 77, 344, 447, 1005, 1048, 1179
PflMI	CCANNNNNTGG	2 cut(s)	388, 766
PinAI	ACCGGT	1 cut(s)	824
PkrI	GCNGC	3 cut(s)	234, 907, 910
PleI	GAGTC	3 cut(s)	97, 449, 1031
PpsI	GAGTC	3 cut(s)	97, 449, 1031
Ppu21I	YACGTR	1 cut(s)	871
PshAI	GACNNNNGTC	1 cut(s)	1041
PsiI	TTATAA	1 cut(s)	731
PspN4I	GGNNCC	3 cut(s)	637, 654, 758
PspPI	GGNCC	1 cut(s)	929
RsaI	GTAC	2 cut(s)	647, 1027
RsaNI	GTAC	2 cut(s)	646, 1026
RseI	CAYNNNNRTG	1 cut(s)	402
SapI	GCTCTTC	1 cut(s)	114
SaqAI	TTAA	5 cut(s)	11, 228, 237, 270, 807
SatI	GCNGC	3 cut(s)	233, 906, 909
Sau3AI	GATC	1 cut(s)	689
Sau96I	GGNCC	1 cut(s)	929
ScaI	AGTACT	1 cut(s)	1027
SchI	GAGTC	3 cut(s)	97, 450, 1031
SduI	GDGCHC	2 cut(s)	796, 967
SfaNI	GCATC	2 cut(s)	403, 1126
SfcI	CTRYAG	2 cut(s)	453, 1077
SinI	GGWCC	1 cut(s)	929
SmiMI	CAYNNNNRTG	1 cut(s)	402
SmlI	CTYRAG	1 cut(s)	236
SmoI	CTYRAG	1 cut(s)	236
SpeI	ACTAGT	1 cut(s)	841
SsiI	CCGC	5 cut(s)	83, 249, 275, 341, 531
SspMI	CTAG	4 cut(s)	125, 435, 842, 968
TaaI	ACNGT	3 cut(s)	69, 263, 493
TaiI	ACGT	4 cut(s)	873, 940, 1071, 1126
TaqI	TCGA	2 cut(s)	75, 858
TatI	WGTACW	1 cut(s)	1025
TfiI	GAWTC	8 cut(s)	16, 41, 77, 344, 447, 1005, 1048, 1179
Tru1I	TTAA	5 cut(s)	11, 228, 237, 270, 807
Tru9I	TTAA	5 cut(s)	11, 228, 237, 270, 807
TscAI	CASTG	2 cut(s)	426, 841
TseFI	GTSAC	3 cut(s)	497, 1031, 1117
TseI	GCWGC	3 cut(s)	232, 905, 908
Tsp45I	GTSAC	3 cut(s)	497, 1031, 1117
TspDTI	ATGAA	3 cut(s)	132, 290, 894
TspRI	CASTG	2 cut(s)	426, 841
Van91I	CCANNNNNTGG	2 cut(s)	388, 766
Vha464I	CTTAAG	1 cut(s)	236
VpaK11BI	GGWCC	1 cut(s)	929
XcmI	CCANNNNNNNNNTGG	1 cut(s)	426
XmiI	GTMKAC	1 cut(s)	189
XspI	CTAG	4 cut(s)	125, 435, 842, 968
ZraI	GACGTC	1 cut(s)	1069
ZrmI	AGTACT	1 cut(s)	1027

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.