Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4C

Orthogroup ID

OG0008191

Physical Location & Seq

Genomic Coordinates Reverse (-)

67216411 .. 67220529

Gene Structure 4119 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4CG432300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2175 bp

ATGTCGGGTTCCAGTGATTCTCCTGCTCCTCAATCATCAGAGCCGACTGTGAATCAGCAAAAGGCTGTATCCAGGGAGGGAAATGGTTCATCAGACAGCTCTCCTCCTTCGCCACCAGCGAAATCGCCGTCTTCTGAACCTCCATCCTCTCCTCCGAAATCTCCACCTCCCTCATCACCGCCTAAATCCTCACCGACTCCGCAAGAGTCACCTGCTCCTCCGAAAGAGTCACCATCACCACCGCCTCCTTCGCCGCCACCTTCGCCTCCACCGTCATCTCCTTCACCATCACCGTCATCCCCGCCTAAATCCAAACCACCTCCGCCTCCTCCTCCTCATTCCCCACCCCCAAAACCATCATCAGCACCAGGGCCACCACCAGATTCTTCTCCTTCTCCACCCAAGTCTGATTCTCCGCCATCAGATAACGATAACGCTCAACCTCCTCCACCGTCCGGTAATGAAGGCGATCAGGGCAATCCTAAAACCCCTGTTTCACCTCCGGCGGCTCCCGGCACCCCTGCCACCCCGGCCCCGCCAACGCCGAACCAGAACCCGGCCACTCCCGCCGTCCCTAGCCCTCCAAAGCAACCTGCCACTCCTAAAACTCCACTTCCTTCGACTCCTCCACCCAAACTATCACCACCTCCTACAAACAAGACCAAAACCGCTGATGACTCGAGCTCAAGTAACTCTGGTCACACAGGTACTGTGATAGGTTTGACAGTCGCCGGAGTCTTCCTGCTCGCCTTGGTTGCTGTCGTTTTCCTTTTCGTGAGGAGGAGGAAGAAGAAAAACCAACCTTATCCCCAGAATTACATGGCTCCACCTCCCGGAGCTGGTCTCACTCCAGAGGGATATTATCCGGGGCAAGGTCCAAATTCTGGTCAGGCGGAAAGCTACTATTCCAATGGACCATATCCGCAGTCTTCGTTTGACCAGACGTATGGGAGTCAGAGAGAAAGGAATATGAATGCTGTTGGATCGGAATCGGATCTCATTGCTGGCCATAAGGTACATTTCAGCTATGAGGAGATGATGGAGATAACCAACGGATTTTCCCGCGCAAATGTGCTTGGTGAGGGTGGTTTTGGGTGTGTCTACAAGGGTTGGATGCCGGACGGGAAAGTCGTGGCGGTCAAGCAGCTTAAGGCCGGTAGCGGGCAGGGAGAGAAGGAATTCAGGGCTGAAGTTGAGATTATCAGTCGAGTGCACCATCGACATTTGGTGTCTTTGGTTGGATATTGCATCTCTGAGCAACAGAGATTGCTTATCTATGAATTTGTTCCAAATCAAACTCTTGAGCACCATTTGCATGCTCCTGGAATGTCGGTGTTGGAATGGACTAAGAGACTCAAGATTGCTTTAGGGTCCGCAAAGGGTTTGGCATATCTACATGAAGACTGCCATCCAAAAATTATTCACCGAGATATTAAATCAGCGAACATTCTTTTGGATGATTCCTTTGAAGCACAGGTTGCAGACTTTGGACTTGCCAAACTGACAGATGATATGAATACTCATGTATCCACGCGAGTGATGGGAACATTTGGGTACATGGCTCCTGAGTATGCATCAAGTGGGAAGTTGACAGATAGATCAGATGTGTTCTCATTTGGAGTCGTGCTTCTAGAGCTCGTAACTGGGCGCAAACCTGTTGACCCAACTCGGCCTTTGGGGGATGAGAGTTTGGTTGAATGGGCTCGTCCACTCCTTATTAAAGCGCTCGAATCAGGTGACTTGAGCGAACTAGTAGATCCTCGGCTTGAGAAGCATTATGTGGAGGGAGAAATGTTAAGAATGGTTGAGGCAGCAGCTGCATGCGTGCGTCATTCTGCTACAAAACGACCACGGATGGCACAGGTCTGTAGAGCATTGGACTGTGAAGGTGATGATCTCTCGAATGGGGTGAAATTTGGGCAGAGTACCGCTTATGACTCTGGCCAGTACAACGAAGACATTATGAGATTCAGGAGGATGGCATTAGGCACCGGCAGCTCAGAGTTTGAAGCGTCTAGTGCAGAATTCACCGGTTCCAGAGAGCTATCAGGACCTCAAACTCCATGGACTACGACTCGCCCAGATGTTTCAAGCGACGAATCAGAAACTCGAGCATTTAACAACCAGGGTAATGCCAGCAAGAACCAACGCAACACCAGTGTCCGGCGGTACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005488 GO:0005515 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0019899 GO:0019900 GO:0019901 GO:0023052 GO:0032502 GO:0036211 GO:0038023 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060089 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164

Pfam Domains

Protein Families

Pkinase Pkinase_Tyr

Protein Analysis

724

Amino Acids

77.12

Weight (kDa)

6.49

Isoelectric Point (pI)

71.54

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	355 - 554	9e-44	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	356 - 625	1.9e-46	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008191)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G10620 AT1G23540 AT1G23540 AT1G70450 AT1G70460
fragaria_vesca	FvH4_4g34330
malus_domestica	MD13G1092900.v1.1 MD16G1093800.v1.1
prunus_persica	Prupe.1G252700_v2.0.a1 Prupe.1G252700_v2.0.a1 Prupe.1G252700_v2.0.a1
pyrus_communis	pycom13g08090
rosa_chinensis	RchiOBHm_Chr4g0443751
rosa_laevigata	RLG00000005893
rosa_multiflora	Rmu_co8490185.1_g000001 Rmu_sc0001426.1_g000001
rosa_roxburghii	Rroxscaffold_5G00384320
rosa_rugosa	Rorug04G0347100
rosa_samantha	Rh4AG407200 Rh4BG418100 Rh4CG432300 Rh4DG413400
rosa_wichuraiana	Rw4G034970

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	220
AasI	GACNNNNNNGTC	1 cut(s)	1127
Acc36I	ACCTGC	2 cut(s)	220, 601
AccB1I	GGYRCC	2 cut(s)	515, 1988
AccB7I	CCANNNNNTGG	1 cut(s)	884
AccI	GTMKAC	1 cut(s)	1101
AccII	CGCG	2 cut(s)	1065, 1534
AclWI	GGATC	3 cut(s)	991, 1002, 1751
AcoI	YGGCCR	3 cut(s)	558, 1006, 1942
AcsI	RAATTY	5 cut(s)	880, 1178, 1280, 1913, 2024
AcuI	CTGAAG	1 cut(s)	1209
AfaI	GTAC	6 cut(s)	709, 1017, 1556, 1927, 1949, 2171
AfeI	AGCGCT	1 cut(s)	1725
AfiI	CCNNNNNNNGG	8 cut(s)	455, 556, 833, 839, 872, 884, 1161, 2163
AflII	CTTAAG	1 cut(s)	1148
AgeI	ACCGGT	1 cut(s)	2030
AgsI	TTSAA	4 cut(s)	1469, 1697, 2009, 2091
AhlI	ACTAGT	1 cut(s)	1750
AjnI	CCWGG	4 cut(s)	71, 367, 1321, 2124
AjuI	GAANNNNNNNTTGG	2 cut(s)	1436, 1468
AleI	CACNNNNGTG	1 cut(s)	1535
Alw21I	GWGCWC	4 cut(s)	686, 1215, 1308, 1638
Alw26I	GTCTC	2 cut(s)	848, 1345
Alw44I	GTGCAC	1 cut(s)	1211
AlwI	GGATC	3 cut(s)	991, 1002, 1751
AlwNI	CAGNNNCTG	2 cut(s)	710, 1817
Ama87I	CYCGRG	2 cut(s)	679, 2109
Aor51HI	AGCGCT	1 cut(s)	1725
AoxI	GGCC	7 cut(s)	371, 531, 558, 1006, 1152, 1670, 1942
ApaLI	GTGCAC	1 cut(s)	1211
ApeKI	GCWGC	5 cut(s)	1144, 1811, 1814, 1817, 1995
ApoI	RAATTY	5 cut(s)	880, 1178, 1280, 1913, 2024
ArsI	GACNNNNNNTTYG	2 cut(s)	113, 145
AsiGI	ACCGGT	1 cut(s)	2030
Asp700I	GAANNNNTTC	3 cut(s)	85, 1178, 1284
AspLEI	GCGC	3 cut(s)	1067, 1650, 1726
AspS9I	GGNCC	6 cut(s)	371, 532, 875, 914, 1371, 2051
AsuC2I	CCSGG	5 cut(s)	513, 530, 557, 834, 867
AvaI	CYCGRG	2 cut(s)	679, 2109
AvaII	GGWCC	4 cut(s)	875, 914, 1371, 2051
BaeGI	GKGCMC	1 cut(s)	1215
BaeI	ACNNNNGTAYC	2 cut(s)	1509, 1542
BalI	TGGCCA	2 cut(s)	1008, 1944
BanI	GGYRCC	2 cut(s)	515, 1988
BanII	GRGCYC	3 cut(s)	686, 1638, 1705
BbsI	GAAGAC	5 cut(s)	123, 730, 921, 1407, 1962
Bbv12I	GWGCWC	4 cut(s)	686, 1215, 1308, 1638
BbvI	GCAGC	5 cut(s)	1156, 1804, 1823, 1826, 2007
BceAI	ACGGC	2 cut(s)	112, 554
BciT130I	CCWGG	4 cut(s)	73, 369, 1323, 2126
BciVI	GTATCC	2 cut(s)	79, 1537
BcnI	CCSGG	5 cut(s)	513, 530, 557, 834, 867
BcoDI	GTCTC	2 cut(s)	848, 1345
BcuI	ACTAGT	1 cut(s)	1750
BfaI	CTAG	4 cut(s)	576, 1631, 1751, 2016
BfmI	CTRYAG	1 cut(s)	1867
BfoI	RGCGCY	1 cut(s)	1727
BfrI	CTTAAG	1 cut(s)	1148
BfuAI	ACCTGC	2 cut(s)	220, 601
BfuI	GTATCC	2 cut(s)	79, 1537
BglI	GCCNNNNNGGC	1 cut(s)	530
BisI	GCNGC	7 cut(s)	254, 507, 1145, 1812, 1815, 1818, 1996
BlsI	GCNGC	7 cut(s)	255, 508, 1146, 1813, 1816, 1819, 1997
Bme1390I	CCNGG	9 cut(s)	73, 369, 513, 530, 557, 834, 867, 1323, 2126
Bme18I	GGWCC	4 cut(s)	875, 914, 1371, 2051
BmeT110I	CYCGRG	2 cut(s)	679, 2109
BmgT120I	GGNCC	6 cut(s)	371, 532, 875, 914, 1371, 2051
BmiI	GGNNCC	9 cut(s)	10, 510, 517, 534, 825, 1372, 1563, 1990, 2035
BmrFI	CCNGG	9 cut(s)	73, 369, 513, 530, 557, 834, 867, 1323, 2126
BmrI	ACTGGG	1 cut(s)	1653
BmsI	GCATC	3 cut(s)	1104, 1257, 1583
BmuI	ACTGGG	1 cut(s)	1653
BpiI	GAAGAC	5 cut(s)	123, 730, 921, 1407, 1962
BplI	GAGNNNNNCTC	2 cut(s)	828, 860
BpmI	CTGGAG	1 cut(s)	834
BpuEI	CTTGAG	5 cut(s)	670, 1322, 1340, 1762, 1787
BpuMI	CCSGG	5 cut(s)	513, 530, 557, 834, 867
BsaBI	GATNNNNATC	1 cut(s)	988
BsaI	GGTCTC	1 cut(s)	848
BsaJI	CCNNGG	9 cut(s)	72, 368, 528, 750, 866, 1760, 1850, 2063, 2125
BsaWI	WCCGGW	2 cut(s)	455, 2030
Bsc4I	CCNNNNNNNGG	8 cut(s)	455, 556, 833, 839, 872, 884, 1161, 2163
Bse118I	RCCGGY	3 cut(s)	1154, 1991, 2030
Bse1I	ACTGG	4 cut(s)	12, 1648, 1945, 2157
Bse3DI	GCAATG	1 cut(s)	999
Bse8I	GATNNNNATC	1 cut(s)	988
BseBI	CCWGG	4 cut(s)	73, 369, 1323, 2126
BseDI	CCNNGG	9 cut(s)	72, 368, 528, 750, 866, 1760, 1850, 2063, 2125
BseGI	GGATG	8 cut(s)	143, 296, 1119, 1408, 1462, 1687, 1860, 1983
BseJI	GATNNNNATC	1 cut(s)	988
BseLI	CCNNNNNNNGG	8 cut(s)	455, 556, 833, 839, 872, 884, 1161, 2163
BseMI	GCAATG	1 cut(s)	999
BseMII	CTCAG	3 cut(s)	1245, 1557, 2013
BseNI	ACTGG	4 cut(s)	12, 1648, 1945, 2157
BseSI	GKGCMC	1 cut(s)	1215
BseXI	GCAGC	5 cut(s)	1156, 1804, 1823, 1826, 2007
BsgI	GTGCAG	1 cut(s)	2040
Bsh1236I	CGCG	2 cut(s)	1065, 1534
BshFI	GGCC	7 cut(s)	373, 533, 560, 1008, 1154, 1672, 1944
BshNI	GGYRCC	2 cut(s)	515, 1988
BshTI	ACCGGT	1 cut(s)	2030
BsiHKAI	GWGCWC	4 cut(s)	686, 1215, 1308, 1638
BsiHKCI	CYCGRG	2 cut(s)	679, 2109
BslFI	GGGAC	1 cut(s)	557
BslI	CCNNNNNNNGG	8 cut(s)	455, 556, 833, 839, 872, 884, 1161, 2163
BsmAI	GTCTC	2 cut(s)	848, 1345
BsmFI	GGGAC	1 cut(s)	557
BsmI	GAATGC	1 cut(s)	979
BsnI	GGCC	7 cut(s)	373, 533, 560, 1008, 1154, 1672, 1944
Bso31I	GGTCTC	1 cut(s)	848
BsoBI	CYCGRG	2 cut(s)	679, 2109
Bsp1286I	GDGCHC	5 cut(s)	686, 1215, 1308, 1638, 1705
Bsp143I	GATC	6 cut(s)	469, 983, 994, 1598, 1756, 1894
Bsp19I	CCATGG	1 cut(s)	2063
BspANI	GGCC	7 cut(s)	373, 533, 560, 1008, 1154, 1672, 1944
BspCNI	CTCAG	3 cut(s)	1246, 1558, 2012
BspFNI	CGCG	2 cut(s)	1065, 1534
BspLI	GGNNCC	9 cut(s)	10, 510, 517, 534, 825, 1372, 1563, 1990, 2035
BspMI	ACCTGC	2 cut(s)	220, 601
BspPI	GGATC	3 cut(s)	991, 1002, 1751
BspT107I	GGYRCC	2 cut(s)	515, 1988
BspTI	CTTAAG	1 cut(s)	1148
BspTNI	GGTCTC	1 cut(s)	848
BsrDI	GCAATG	1 cut(s)	999
BsrFI	RCCGGY	3 cut(s)	1154, 1991, 2030
BsrI	ACTGG	4 cut(s)	12, 1648, 1945, 2157
BssAI	RCCGGY	3 cut(s)	1154, 1991, 2030
BssECI	CCNNGG	9 cut(s)	72, 368, 528, 750, 866, 1760, 1850, 2063, 2125
BssMI	GATC	6 cut(s)	469, 983, 994, 1598, 1756, 1894
BssT1I	CCWWGG	2 cut(s)	750, 2063
Bst2UI	CCWGG	4 cut(s)	73, 369, 1323, 2126
Bst4CI	ACNGT	7 cut(s)	49, 273, 294, 453, 712, 727, 1883
BstAFI	CTTAAG	1 cut(s)	1148
BstAPI	GCANNNNNTGC	3 cut(s)	1312, 1478, 1817
BstC8I	GCNNGC	7 cut(s)	747, 1006, 1163, 1317, 1822, 1826, 2137
BstDEI	CTNAG	4 cut(s)	1254, 1347, 1566, 1999
BstDSI	CCRYGG	2 cut(s)	1850, 2063
BstF5I	GGATG	8 cut(s)	143, 296, 1119, 1408, 1462, 1687, 1860, 1983
BstFNI	CGCG	2 cut(s)	1065, 1534
BstH2I	RGCGCY	1 cut(s)	1727
BstHHI	GCGC	3 cut(s)	1067, 1650, 1726
BstKTI	GATC	6 cut(s)	472, 986, 997, 1601, 1759, 1897
BstMAI	GTCTC	2 cut(s)	848, 1345
BstMBI	GATC	6 cut(s)	469, 983, 994, 1598, 1756, 1894
BstNI	CCWGG	4 cut(s)	73, 369, 1323, 2126
BstNSI	RCATGY	2 cut(s)	1319, 1824
BstSCI	CCNGG	9 cut(s)	71, 367, 511, 528, 555, 832, 865, 1321, 2124
BstSFI	CTRYAG	1 cut(s)	1867
BstSLI	GKGCMC	1 cut(s)	1215
BstUI	CGCG	2 cut(s)	1065, 1534
BstV1I	GCAGC	5 cut(s)	1156, 1804, 1823, 1826, 2007
BstV2I	GAAGAC	5 cut(s)	123, 730, 921, 1407, 1962
BstX2I	RGATCY	2 cut(s)	994, 1756
BstXI	CCANNNNNNTGG	1 cut(s)	947
BstYI	RGATCY	2 cut(s)	994, 1756
BsuI	GTATCC	2 cut(s)	79, 1537
BsuRI	GGCC	7 cut(s)	373, 533, 560, 1008, 1154, 1672, 1944
BtgI	CCRYGG	2 cut(s)	1850, 2063
BtsCI	GGATG	8 cut(s)	143, 296, 1119, 1408, 1462, 1687, 1860, 1983
BtsIMutI	CAGTG	2 cut(s)	19, 2164
BveI	ACCTGC	2 cut(s)	220, 601
Cac8I	GCNNGC	7 cut(s)	747, 1006, 1163, 1317, 1822, 1826, 2137
CaiI	CAGNNNCTG	2 cut(s)	710, 1817
CfoI	GCGC	3 cut(s)	1067, 1650, 1726
Cfr10I	RCCGGY	3 cut(s)	1154, 1991, 2030
Cfr13I	GGNCC	6 cut(s)	371, 532, 875, 914, 1371, 2051
CseI	GACGC	2 cut(s)	1817, 2001
Csp6I	GTAC	6 cut(s)	708, 1016, 1555, 1926, 1948, 2170
CspAI	ACCGGT	1 cut(s)	2030
CviAII	CATG	7 cut(s)	820, 1316, 1397, 1523, 1558, 1821, 2064
CviQI	GTAC	6 cut(s)	708, 1016, 1555, 1926, 1948, 2170
DdeI	CTNAG	4 cut(s)	1254, 1347, 1566, 1999
DpnI	GATC	6 cut(s)	471, 985, 996, 1600, 1758, 1896
DpnII	GATC	6 cut(s)	469, 983, 994, 1598, 1756, 1894
DrdI	GACNNNNNNGTC	1 cut(s)	1127
DseDI	GACNNNNNNGTC	1 cut(s)	1127
EaeI	YGGCCR	3 cut(s)	558, 1006, 1942
EciI	GGCGGA	3 cut(s)	312, 405, 908
Ecl136II	GAGCTC	2 cut(s)	684, 1636
Eco130I	CCWWGG	2 cut(s)	750, 2063
Eco24I	GRGCYC	3 cut(s)	686, 1638, 1705
Eco31I	GGTCTC	1 cut(s)	848
Eco47I	GGWCC	4 cut(s)	875, 914, 1371, 2051
Eco47III	AGCGCT	1 cut(s)	1725
Eco53kI	GAGCTC	2 cut(s)	684, 1636
Eco57I	CTGAAG	1 cut(s)	1209
Eco88I	CYCGRG	2 cut(s)	679, 2109
EcoICRI	GAGCTC	2 cut(s)	684, 1636
EcoO109I	RGGNCCY	1 cut(s)	2051
EcoRI	GAATTC	2 cut(s)	1178, 2024
EcoRII	CCWGG	4 cut(s)	71, 367, 1321, 2124
EcoT14I	CCWWGG	2 cut(s)	750, 2063
EcoT22I	ATGCAT	1 cut(s)	1576
EcoT38I	GRGCYC	3 cut(s)	686, 1638, 1705
ErhI	CCWWGG	2 cut(s)	750, 2063
FaeI	CATG	7 cut(s)	823, 1319, 1400, 1526, 1561, 1824, 2067
FaqI	GGGAC	1 cut(s)	557
FatI	CATG	7 cut(s)	819, 1315, 1396, 1522, 1557, 1820, 2063
FauI	CCCGC	5 cut(s)	309, 543, 574, 1070, 1154
FblI	GTMKAC	1 cut(s)	1101
Fnu4HI	GCNGC	7 cut(s)	254, 507, 1145, 1812, 1815, 1818, 1996
FokI	GGATG	8 cut(s)	130, 283, 1126, 1395, 1469, 1694, 1867, 1990
FriOI	GRGCYC	3 cut(s)	686, 1638, 1705
Fsp4HI	GCNGC	7 cut(s)	254, 507, 1145, 1812, 1815, 1818, 1996
FspBI	CTAG	4 cut(s)	576, 1631, 1751, 2016
GlaI	GCGC	3 cut(s)	1066, 1649, 1725
GluI	GCNGC	7 cut(s)	254, 507, 1145, 1812, 1815, 1818, 1996
GsuI	CTGGAG	1 cut(s)	834
HaeII	RGCGCY	1 cut(s)	1727
HaeIII	GGCC	7 cut(s)	373, 533, 560, 1008, 1154, 1672, 1944
HgaI	GACGC	2 cut(s)	1817, 2001
HhaI	GCGC	3 cut(s)	1067, 1650, 1726
Hin1II	CATG	7 cut(s)	823, 1319, 1400, 1526, 1561, 1824, 2067
Hin6I	GCGC	3 cut(s)	1065, 1648, 1724
HinP1I	GCGC	3 cut(s)	1065, 1648, 1724
HincII	GTYRAC	2 cut(s)	1590, 1660
HindII	GTYRAC	2 cut(s)	1590, 1660
Hpy166II	GTNNAC	5 cut(s)	1102, 1213, 1590, 1660, 1709
Hpy8I	GTNNAC	5 cut(s)	1102, 1213, 1590, 1660, 1709
Hpy99I	CGWCG	1 cut(s)	2099
HpyAV	CCTTC	9 cut(s)	117, 258, 270, 291, 402, 458, 627, 1168, 1880
HpyCH4III	ACNGT	7 cut(s)	49, 273, 294, 453, 712, 727, 1883
HpyCH4IV	ACGT	1 cut(s)	944
HpyCH4V	TGCA	7 cut(s)	1213, 1248, 1315, 1481, 1574, 1820, 2021
HpyF3I	CTNAG	4 cut(s)	1254, 1347, 1566, 1999
HpySE526I	ACGT	1 cut(s)	944
Hsp92II	CATG	7 cut(s)	823, 1319, 1400, 1526, 1561, 1824, 2067
HspAI	GCGC	3 cut(s)	1065, 1648, 1724
Kzo9I	GATC	6 cut(s)	469, 983, 994, 1598, 1756, 1894
LmnI	GCTCC	7 cut(s)	31, 220, 514, 829, 836, 1324, 1567
Lsp1109I	GCAGC	5 cut(s)	1156, 1804, 1823, 1826, 2007
LweI	GCATC	3 cut(s)	1104, 1257, 1583
MaeI	CTAG	4 cut(s)	576, 1631, 1751, 2016
MaeII	ACGT	1 cut(s)	944
MaeIII	GTNAC	6 cut(s)	207, 228, 689, 698, 1639, 1736
MalI	GATC	6 cut(s)	471, 985, 996, 1600, 1758, 1896
MboI	GATC	6 cut(s)	469, 983, 994, 1598, 1756, 1894
MboII	GAAGA	8 cut(s)	123, 378, 730, 799, 802, 921, 1412, 1967
MflI	RGATCY	2 cut(s)	994, 1756
MhlI	GDGCHC	5 cut(s)	686, 1215, 1308, 1638, 1705
MlsI	TGGCCA	2 cut(s)	1008, 1944
MluCI	AATT	7 cut(s)	814, 880, 1178, 1280, 1416, 1913, 2024
MluNI	TGGCCA	2 cut(s)	1008, 1944
MmeI	TCCRAC	4 cut(s)	961, 1091, 1219, 1317
Mox20I	TGGCCA	2 cut(s)	1008, 1944
Mph1103I	ATGCAT	1 cut(s)	1576
MroXI	GAANNNNTTC	3 cut(s)	85, 1178, 1284
MscI	TGGCCA	2 cut(s)	1008, 1944
MseI	TTAA	5 cut(s)	1149, 1434, 1719, 1796, 2118
MslI	CAYNNNNRTG	2 cut(s)	1314, 1535
Msp20I	TGGCCA	2 cut(s)	1008, 1944
MspA1I	CMGCKG	2 cut(s)	671, 1817
MspCI	CTTAAG	1 cut(s)	1148
MspR9I	CCNGG	9 cut(s)	73, 369, 513, 530, 557, 834, 867, 1323, 2126
Mva1269I	GAATGC	1 cut(s)	979
MvaI	CCWGG	4 cut(s)	73, 369, 1323, 2126
MvnI	CGCG	2 cut(s)	1065, 1534
NciI	CCSGG	5 cut(s)	513, 530, 557, 834, 867
NcoI	CCATGG	1 cut(s)	2063
NdeII	GATC	6 cut(s)	469, 983, 994, 1598, 1756, 1894
NlaIII	CATG	7 cut(s)	823, 1319, 1400, 1526, 1561, 1824, 2067
NlaIV	GGNNCC	9 cut(s)	10, 510, 517, 534, 825, 1372, 1563, 1990, 2035
NmeAIII	GCCGAG	2 cut(s)	1648, 1741
NmuCI	GTSAC	4 cut(s)	207, 228, 698, 1736
NsiI	ATGCAT	1 cut(s)	1576
NspI	RCATGY	2 cut(s)	1319, 1824
OliI	CACNNNNGTG	1 cut(s)	1535
PaeI	GCATGC	2 cut(s)	1319, 1824
PaeR7I	CTCGAG	2 cut(s)	679, 2109
PaqCI	CACCTGC	1 cut(s)	220
PcsI	WCGNNNNNNNCGW	3 cut(s)	116, 269, 1128
PctI	GAATGC	1 cut(s)	979
PdmI	GAANNNNTTC	3 cut(s)	85, 1178, 1284
PfeI	GAWTC	9 cut(s)	17, 52, 383, 410, 989, 1460, 1730, 1968, 2099
PflMI	CCANNNNNTGG	1 cut(s)	884
PfoI	TCCNGGA	2 cut(s)	832, 1321
PinAI	ACCGGT	1 cut(s)	2030
PkrI	GCNGC	7 cut(s)	255, 508, 1146, 1813, 1816, 1819, 1997
PpuMI	RGGWCCY	1 cut(s)	2051
Psp124BI	GAGCTC	2 cut(s)	686, 1638
Psp5II	RGGWCCY	1 cut(s)	2051
Psp6I	CCWGG	4 cut(s)	71, 367, 1321, 2124
PspGI	CCWGG	4 cut(s)	71, 367, 1321, 2124
PspN4I	GGNNCC	9 cut(s)	10, 510, 517, 534, 825, 1372, 1563, 1990, 2035
PspPI	GGNCC	6 cut(s)	371, 532, 875, 914, 1371, 2051
PspPPI	RGGWCCY	1 cut(s)	2051
PspXI	VCTCGAGB	2 cut(s)	679, 2109
PstNI	CAGNNNCTG	2 cut(s)	710, 1817
PsuI	RGATCY	2 cut(s)	994, 1756
PvuII	CAGCTG	1 cut(s)	1817
RsaI	GTAC	6 cut(s)	709, 1017, 1556, 1927, 1949, 2171
RsaNI	GTAC	6 cut(s)	708, 1016, 1555, 1926, 1948, 2170
RseI	CAYNNNNRTG	2 cut(s)	1314, 1535
SacI	GAGCTC	2 cut(s)	686, 1638
SaqAI	TTAA	5 cut(s)	1149, 1434, 1719, 1796, 2118
SatI	GCNGC	7 cut(s)	254, 507, 1145, 1812, 1815, 1818, 1996
Sau3AI	GATC	6 cut(s)	469, 983, 994, 1598, 1756, 1894
Sau96I	GGNCC	6 cut(s)	371, 532, 875, 914, 1371, 2051
ScrFI	CCNGG	9 cut(s)	73, 369, 513, 530, 557, 834, 867, 1323, 2126
SduI	GDGCHC	5 cut(s)	686, 1215, 1308, 1638, 1705
SfaNI	GCATC	3 cut(s)	1104, 1257, 1583
SfcI	CTRYAG	1 cut(s)	1867
Sfr274I	CTCGAG	2 cut(s)	679, 2109
SinI	GGWCC	4 cut(s)	875, 914, 1371, 2051
SlaI	CTCGAG	2 cut(s)	679, 2109
SmiMI	CAYNNNNRTG	2 cut(s)	1314, 1535
SmlI	CTYRAG	8 cut(s)	679, 685, 1148, 1301, 1355, 1741, 1766, 2109
SmoI	CTYRAG	8 cut(s)	679, 685, 1148, 1301, 1355, 1741, 1766, 2109
SpeI	ACTAGT	1 cut(s)	1750
SphI	GCATGC	2 cut(s)	1319, 1824
Sse9I	AATT	7 cut(s)	814, 880, 1178, 1280, 1416, 1913, 2024
SspMI	CTAG	4 cut(s)	576, 1631, 1751, 2016
SstI	GAGCTC	2 cut(s)	686, 1638
StyD4I	CCNGG	9 cut(s)	71, 367, 511, 528, 555, 832, 865, 1321, 2124
StyI	CCWWGG	2 cut(s)	750, 2063
TaaI	ACNGT	7 cut(s)	49, 273, 294, 453, 712, 727, 1883
TaiI	ACGT	1 cut(s)	947
TaqI	TCGA	7 cut(s)	620, 680, 1207, 1219, 1728, 1901, 2110
TasI	AATT	7 cut(s)	814, 880, 1178, 1280, 1416, 1913, 2024
TatI	WGTACW	1 cut(s)	1947
TauI	GCSGC	2 cut(s)	256, 509
TfiI	GAWTC	9 cut(s)	17, 52, 383, 410, 989, 1460, 1730, 1968, 2099
Tru1I	TTAA	5 cut(s)	1149, 1434, 1719, 1796, 2118
Tru9I	TTAA	5 cut(s)	1149, 1434, 1719, 1796, 2118
TscAI	CASTG	2 cut(s)	19, 2164
TseFI	GTSAC	4 cut(s)	207, 228, 698, 1736
TseI	GCWGC	5 cut(s)	1144, 1811, 1814, 1817, 1995
Tsp45I	GTSAC	4 cut(s)	207, 228, 698, 1736
TspDTI	ATGAA	6 cut(s)	78, 477, 986, 1293, 1413, 1529
TspGWI	ACGGA	2 cut(s)	1068, 1867
TspRI	CASTG	2 cut(s)	19, 2164
Van91I	CCANNNNNTGG	1 cut(s)	884
Vha464I	CTTAAG	1 cut(s)	1148
VneI	GTGCAC	1 cut(s)	1211
VpaK11BI	GGWCC	4 cut(s)	875, 914, 1371, 2051
XapI	RAATTY	5 cut(s)	880, 1178, 1280, 1913, 2024
XbaI	TCTAGA	1 cut(s)	1630
XceI	RCATGY	2 cut(s)	1319, 1824
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1537
XhoI	CTCGAG	2 cut(s)	679, 2109
XmiI	GTMKAC	1 cut(s)	1101
XmnI	GAANNNNTTC	3 cut(s)	85, 1178, 1284
XspI	CTAG	4 cut(s)	576, 1631, 1751, 2016
Zsp2I	ATGCAT	1 cut(s)	1576

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.