Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0007589

Physical Location & Seq

Genomic Coordinates Reverse (-)

8840203 .. 8842445

Gene Structure 2243 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G25230.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1020 bp

ATGAGTTCTAAGTTTGATATCGGCTCCTTAAGCATAGTAATGACTCTGCTTATTTGCTTCTTATTATTATCTTTGGCTCCAAAACTTGAGGCTGAGCTCGCAACGGTCCAACATGCTCCAAACCCCGATGGCTCTATCAGTTTTCTGGTGATTGGAGATTGGGGTAGGCATGGACTCTACAACCAATCCCAAGTTGCCCTCCAGATGGGGAGAATCGGGGAGGAGATGGATATCAATTTTGTGGTATCGACGGGTGATAACATCTACGATAACGGGATGAAAAGTATCGATGATCCCGCCTTTCAACTCTCCTTTAGTAATATCTACACTTCTCCTAGCCTGCAAAAGCCTTGGTACCTTGTATTGGGGAATCACGACTATAGAGGAGATGTTGAGGCACAATTGAGTCCTATCCTCAGATCTATGGATAGCCGTTGGATTTGCATGAGATCCTTCATCGTTGACGCTGAGATCGCAGAGCTCTTCTTTGTCGACACAACTCCTTTTGTAGATGCTTATTTCCTCAGTCCACAAGACCAAACTTACGACTGGAGCGGCGTATCACCGCGAAAATCCTACCTTCAGACCATCTTAACGGAGTTGGAGATGGGTCTAAGAGAATCAAGTGCAAAATGGAAAATTGTGGTGGGTCACCATGCTATAAAGAGTGCTTCCATTCATGGGAATACCAAAGAGCTTGAATCTCTCCTCTTACCCATCCTTGAGGCGAATAAAGTTGATCTCTATATGAACGGTCATGATCATTGCTTGCAACATATAAGCACATCACAAAGCCCAATTCAGTTTCTAACGAGTGGTGGTGGGTCAAAGGCATGGAGAGGCTATTACAATTGGACAACACCAGAGGATATGAAATTTTTCTACGATGGACAAGGTTTCATGTCAGTTAAGATCACTAGATCAGAATTGAGTGTCGTTTTTTATGATGTCTCCGGCAATAGTTTGCATAAGTGGGACACATCGAAAATGTTAGACTCGGATTTTTATTTCCCATTGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0003993 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0006793 GO:0006796 GO:0008150 GO:0008152 GO:0009987 GO:0016311 GO:0016787 GO:0016788 GO:0016791 GO:0042578 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044424 GO:0044444 GO:0044464

KEGG Pathways

Metabolic & Signaling

ko00740 ko01100 ko04142 ko04380 ko05323 map00740 map01100 map04142 map04380 map05323

Pfam Domains

Protein Families

Metallophos

Protein Analysis

339

Amino Acids

38.24

Weight (kDa)

5.06

Isoelectric Point (pI)

52.01

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Metallophos	PF00149	47 - 256	8.5e-19	Calcineurin-like phosphoesterase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007589)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G14700 AT1G14700 AT1G14700 AT1G14700 AT1G25230 AT1G25230 AT1G25230 AT2G01890 AT2G01890 AT2G01890
malus_domestica	MD06G1233400.v1.1
prunus_persica	Prupe.5G237800_v2.0.a1
pyrus_communis	pycom06g20800
rosa_chinensis	RchiOBHm_Chr7g0177851
rosa_laevigata	RLG00000005497
rosa_multiflora	Rmu_sc0006214.1_g000005
rosa_roxburghii	Rroxscaffold_3G00275500
rosa_rugosa	Rorug06G0410100 Rorug06G0410200
rosa_samantha	Rh7AG009600 Rh7BG009700 Rh7CG009800 Rh7DG009700
rosa_wichuraiana	Rw7G000800

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	354
AccB1I	GGYRCC	1 cut(s)	354
AccBSI	CCGCTC	1 cut(s)	555
AccI	GTMKAC	1 cut(s)	492
AccII	CGCG	1 cut(s)	568
AciI	CCGC	3 cut(s)	297, 555, 566
AclWI	GGATC	2 cut(s)	287, 444
AcsI	RAATTY	1 cut(s)	875
AcuI	CTGAAG	1 cut(s)	566
AfaI	GTAC	1 cut(s)	356
AfiI	CCNNNNNNNGG	3 cut(s)	205, 364, 681
AflII	CTTAAG	1 cut(s)	28
AgsI	TTSAA	2 cut(s)	305, 701
AluBI	AGCT	3 cut(s)	97, 481, 697
AluI	AGCT	3 cut(s)	97, 481, 697
Alw21I	GWGCWC	2 cut(s)	99, 483
Alw26I	GTCTC	1 cut(s)	955
AlwI	GGATC	2 cut(s)	287, 444
ApoI	RAATTY	1 cut(s)	875
Asp700I	GAANNNNTTC	1 cut(s)	878
Asp718I	GGTACC	1 cut(s)	354
AspS9I	GGNCC	1 cut(s)	106
AsuHPI	GGTGA	4 cut(s)	160, 266, 555, 644
AvaII	GGWCC	1 cut(s)	106
BanI	GGYRCC	1 cut(s)	354
BanII	GRGCYC	2 cut(s)	99, 483
Bbv12I	GWGCWC	2 cut(s)	99, 483
BccI	CCATC	7 cut(s)	122, 199, 220, 596, 601, 725, 881
BceAI	ACGGC	1 cut(s)	417
BclI	TGATCA	1 cut(s)	760
BcoDI	GTCTC	1 cut(s)	955
BfaI	CTAG	2 cut(s)	336, 918
BfmI	CTRYAG	1 cut(s)	379
BfrI	CTTAAG	1 cut(s)	28
BglII	AGATCT	1 cut(s)	419
BisI	GCNGC	1 cut(s)	556
BlpI	GCTNAGC	1 cut(s)	93
BlsI	GCNGC	1 cut(s)	557
Bme18I	GGWCC	1 cut(s)	106
BmgT120I	GGNCC	1 cut(s)	106
BmiI	GGNNCC	3 cut(s)	25, 78, 356
BmsI	GCATC	1 cut(s)	502
BpmI	CTGGAG	2 cut(s)	185, 571
Bpu1102I	GCTNAGC	1 cut(s)	93
BpuEI	CTTGAG	2 cut(s)	107, 743
Bsa29I	ATCGAT	1 cut(s)	288
BsaBI	GATNNNNATC	1 cut(s)	230
BsaJI	CCNNGG	1 cut(s)	350
Bsc4I	CCNNNNNNNGG	3 cut(s)	205, 364, 681
Bse1I	ACTGG	1 cut(s)	554
Bse3DI	GCAATG	1 cut(s)	763
Bse8I	GATNNNNATC	1 cut(s)	230
BseCI	ATCGAT	1 cut(s)	288
BseDI	CCNNGG	1 cut(s)	350
BseGI	GGATG	2 cut(s)	282, 717
BseJI	GATNNNNATC	1 cut(s)	230
BseLI	CCNNNNNNNGG	3 cut(s)	205, 364, 681
BseMI	GCAATG	1 cut(s)	763
BseMII	CTCAG	4 cut(s)	84, 430, 459, 538
BseNI	ACTGG	1 cut(s)	554
BseRI	GAGGAG	3 cut(s)	236, 399, 698
Bsh1236I	CGCG	1 cut(s)	568
BshNI	GGYRCC	1 cut(s)	354
BshVI	ATCGAT	1 cut(s)	288
BsiHKAI	GWGCWC	2 cut(s)	99, 483
BsiSI	CCGG	1 cut(s)	954
BslFI	GGGAC	1 cut(s)	989
BslI	CCNNNNNNNGG	3 cut(s)	205, 364, 681
BsmAI	GTCTC	1 cut(s)	955
BsmFI	GGGAC	1 cut(s)	989
Bsp1286I	GDGCHC	2 cut(s)	99, 483
Bsp143I	GATC	8 cut(s)	292, 419, 449, 471, 739, 760, 912, 920
Bsp1720I	GCTNAGC	1 cut(s)	93
BspACI	CCGC	3 cut(s)	297, 555, 566
BspCNI	CTCAG	4 cut(s)	85, 429, 460, 537
BspDI	ATCGAT	1 cut(s)	288
BspFNI	CGCG	1 cut(s)	568
BspHI	TCATGA	1 cut(s)	757
BspLI	GGNNCC	3 cut(s)	25, 78, 356
BspPI	GGATC	2 cut(s)	287, 444
BspQI	GCTCTTC	1 cut(s)	488
BspT107I	GGYRCC	1 cut(s)	354
BspTI	CTTAAG	1 cut(s)	28
BsrBI	CCGCTC	1 cut(s)	555
BsrDI	GCAATG	1 cut(s)	763
BsrI	ACTGG	1 cut(s)	554
BssECI	CCNNGG	1 cut(s)	350
BssMI	GATC	8 cut(s)	292, 419, 449, 471, 739, 760, 912, 920
BssT1I	CCWWGG	1 cut(s)	350
Bst4CI	ACNGT	2 cut(s)	106, 755
Bst6I	CTCTTC	1 cut(s)	488
BstAFI	CTTAAG	1 cut(s)	28
BstC8I	GCNNGC	3 cut(s)	99, 341, 770
BstDEI	CTNAG	6 cut(s)	9, 93, 416, 468, 524, 614
BstEII	GGTNACC	1 cut(s)	650
BstF5I	GGATG	2 cut(s)	282, 717
BstFNI	CGCG	1 cut(s)	568
BstKTI	GATC	8 cut(s)	295, 422, 452, 474, 742, 763, 915, 923
BstMAI	GTCTC	1 cut(s)	955
BstMBI	GATC	8 cut(s)	292, 419, 449, 471, 739, 760, 912, 920
BstMWI	GCNNNNNNNGC	3 cut(s)	30, 98, 473
BstNSI	RCATGY	1 cut(s)	116
BstPI	GGTNACC	1 cut(s)	650
BstSFI	CTRYAG	1 cut(s)	379
BstUI	CGCG	1 cut(s)	568
BstX2I	RGATCY	2 cut(s)	419, 449
BstYI	RGATCY	2 cut(s)	419, 449
Bsu15I	ATCGAT	1 cut(s)	288
BsuTUI	ATCGAT	1 cut(s)	288
BtsCI	GGATG	2 cut(s)	282, 717
Cac8I	GCNNGC	3 cut(s)	99, 341, 770
CciI	TCATGA	1 cut(s)	757
Cfr13I	GGNCC	1 cut(s)	106
ClaI	ATCGAT	1 cut(s)	288
CseI	GACGC	1 cut(s)	473
Csp6I	GTAC	1 cut(s)	355
CviAII	CATG	8 cut(s)	113, 170, 445, 656, 680, 758, 834, 901
CviQI	GTAC	1 cut(s)	355
DdeI	CTNAG	6 cut(s)	9, 93, 416, 468, 524, 614
DpnI	GATC	8 cut(s)	294, 421, 451, 473, 741, 762, 914, 922
DpnII	GATC	8 cut(s)	292, 419, 449, 471, 739, 760, 912, 920
Eam1104I	CTCTTC	1 cut(s)	488
EarI	CTCTTC	1 cut(s)	488
Ecl136II	GAGCTC	2 cut(s)	97, 481
Eco130I	CCWWGG	1 cut(s)	350
Eco24I	GRGCYC	2 cut(s)	99, 483
Eco32I	GATATC	2 cut(s)	19, 232
Eco47I	GGWCC	1 cut(s)	106
Eco53kI	GAGCTC	2 cut(s)	97, 481
Eco57I	CTGAAG	1 cut(s)	566
Eco91I	GGTNACC	1 cut(s)	650
EcoICRI	GAGCTC	2 cut(s)	97, 481
EcoO65I	GGTNACC	1 cut(s)	650
EcoRV	GATATC	2 cut(s)	19, 232
EcoT14I	CCWWGG	1 cut(s)	350
EcoT38I	GRGCYC	2 cut(s)	99, 483
ErhI	CCWWGG	1 cut(s)	350
FaeI	CATG	8 cut(s)	116, 173, 448, 659, 683, 761, 837, 904
FaqI	GGGAC	1 cut(s)	989
FatI	CATG	8 cut(s)	112, 169, 444, 655, 679, 757, 833, 900
FauI	CCCGC	1 cut(s)	304
FbaI	TGATCA	1 cut(s)	760
FblI	GTMKAC	1 cut(s)	492
Fnu4HI	GCNGC	1 cut(s)	556
FokI	GGATG	2 cut(s)	289, 704
FriOI	GRGCYC	2 cut(s)	99, 483
Fsp4HI	GCNGC	1 cut(s)	556
FspBI	CTAG	2 cut(s)	336, 918
GluI	GCNGC	1 cut(s)	556
GsuI	CTGGAG	2 cut(s)	185, 571
HapII	CCGG	1 cut(s)	954
HgaI	GACGC	1 cut(s)	473
Hin1II	CATG	8 cut(s)	116, 173, 448, 659, 683, 761, 837, 904
HincII	GTYRAC	2 cut(s)	463, 493
HindII	GTYRAC	2 cut(s)	463, 493
HinfI	GANTC	8 cut(s)	43, 174, 213, 370, 406, 620, 701, 995
HpaII	CCGG	1 cut(s)	954
HphI	GGTGA	4 cut(s)	160, 266, 555, 644
Hpy166II	GTNNAC	3 cut(s)	463, 493, 530
Hpy188I	TCNGA	4 cut(s)	419, 585, 925, 1000
Hpy188III	TCNNGA	3 cut(s)	202, 374, 758
Hpy8I	GTNNAC	3 cut(s)	463, 493, 530
Hpy99I	CGWCG	1 cut(s)	253
HpyAV	CCTTC	2 cut(s)	463, 590
HpyCH4III	ACNGT	2 cut(s)	106, 755
HpyCH4V	TGCA	5 cut(s)	343, 444, 629, 772, 967
HpyF10VI	GCNNNNNNNGC	3 cut(s)	30, 98, 473
HpyF3I	CTNAG	6 cut(s)	9, 93, 416, 468, 524, 614
Hsp92II	CATG	8 cut(s)	116, 173, 448, 659, 683, 761, 837, 904
KpnI	GGTACC	1 cut(s)	358
Ksp22I	TGATCA	1 cut(s)	760
Kzo9I	GATC	8 cut(s)	292, 419, 449, 471, 739, 760, 912, 920
LguI	GCTCTTC	1 cut(s)	488
LmnI	GCTCC	4 cut(s)	29, 82, 121, 552
LpnPI	CCDG	6 cut(s)	131, 215, 353, 535, 876, 967
LweI	GCATC	1 cut(s)	502
MaeI	CTAG	2 cut(s)	336, 918
MaeIII	GTNAC	1 cut(s)	650
MalI	GATC	8 cut(s)	294, 421, 451, 473, 741, 762, 914, 922
MbiI	CCGCTC	1 cut(s)	555
MboI	GATC	8 cut(s)	292, 419, 449, 471, 739, 760, 912, 920
MboII	GAAGA	1 cut(s)	475
MfeI	CAATTG	2 cut(s)	401, 850
MflI	RGATCY	2 cut(s)	419, 449
MhlI	GDGCHC	2 cut(s)	99, 483
MluCI	AATT	7 cut(s)	235, 401, 639, 798, 850, 875, 926
MlyI	GAGTC	4 cut(s)	37, 168, 415, 989
MmeI	TCCRAC	3 cut(s)	133, 416, 582
MroXI	GAANNNNTTC	1 cut(s)	878
MseI	TTAA	3 cut(s)	29, 593, 909
MslI	CAYNNNNRTG	1 cut(s)	38
MspCI	CTTAAG	1 cut(s)	28
MspI	CCGG	1 cut(s)	954
MunI	CAATTG	2 cut(s)	401, 850
MvnI	CGCG	1 cut(s)	568
MwoI	GCNNNNNNNGC	3 cut(s)	30, 98, 473
NdeII	GATC	8 cut(s)	292, 419, 449, 471, 739, 760, 912, 920
NlaIII	CATG	8 cut(s)	116, 173, 448, 659, 683, 761, 837, 904
NlaIV	GGNNCC	3 cut(s)	25, 78, 356
NmuCI	GTSAC	1 cut(s)	650
NspI	RCATGY	1 cut(s)	116
PagI	TCATGA	1 cut(s)	757
PciSI	GCTCTTC	1 cut(s)	488
PdmI	GAANNNNTTC	1 cut(s)	878
PfeI	GAWTC	4 cut(s)	213, 370, 620, 701
PkrI	GCNGC	1 cut(s)	557
PleI	GAGTC	4 cut(s)	37, 168, 414, 989
PpsI	GAGTC	4 cut(s)	37, 168, 414, 989
Psp124BI	GAGCTC	2 cut(s)	99, 483
PspEI	GGTNACC	1 cut(s)	650
PspN4I	GGNNCC	3 cut(s)	25, 78, 356
PspPI	GGNCC	1 cut(s)	106
PsuI	RGATCY	2 cut(s)	419, 449
RsaI	GTAC	1 cut(s)	356
RsaNI	GTAC	1 cut(s)	355
RseI	CAYNNNNRTG	1 cut(s)	38
SacI	GAGCTC	2 cut(s)	99, 483
SalI	GTCGAC	1 cut(s)	491
SapI	GCTCTTC	1 cut(s)	488
SaqAI	TTAA	3 cut(s)	29, 593, 909
SatI	GCNGC	1 cut(s)	556
Sau3AI	GATC	8 cut(s)	292, 419, 449, 471, 739, 760, 912, 920
Sau96I	GGNCC	1 cut(s)	106
SchI	GAGTC	4 cut(s)	37, 168, 415, 989
SduI	GDGCHC	2 cut(s)	99, 483
SetI	ASST	6 cut(s)	99, 360, 483, 582, 699, 898
SfaNI	GCATC	1 cut(s)	502
SfcI	CTRYAG	1 cut(s)	379
SinI	GGWCC	1 cut(s)	106
SmiMI	CAYNNNNRTG	1 cut(s)	38
SmlI	CTYRAG	3 cut(s)	28, 86, 722
SmoI	CTYRAG	3 cut(s)	28, 86, 722
Sse9I	AATT	7 cut(s)	235, 401, 639, 798, 850, 875, 926
SsiI	CCGC	3 cut(s)	297, 555, 566
SspMI	CTAG	2 cut(s)	336, 918
SstI	GAGCTC	2 cut(s)	99, 483
StyI	CCWWGG	1 cut(s)	350
TaaI	ACNGT	2 cut(s)	106, 755
TaqI	TCGA	4 cut(s)	248, 288, 492, 983
TasI	AATT	7 cut(s)	235, 401, 639, 798, 850, 875, 926
TauI	GCSGC	1 cut(s)	558
TfiI	GAWTC	4 cut(s)	213, 370, 620, 701
Tru1I	TTAA	3 cut(s)	29, 593, 909
Tru9I	TTAA	3 cut(s)	29, 593, 909
TseFI	GTSAC	1 cut(s)	650
Tsp45I	GTSAC	1 cut(s)	650
TspDTI	ATGAA	6 cut(s)	293, 445, 668, 764, 887, 889
TspGWI	ACGGA	1 cut(s)	611
Vha464I	CTTAAG	1 cut(s)	28
VpaK11BI	GGWCC	1 cut(s)	106
XapI	RAATTY	1 cut(s)	875
XceI	RCATGY	1 cut(s)	116
XmiI	GTMKAC	1 cut(s)	492
XmnI	GAANNNNTTC	1 cut(s)	878
XspI	CTAG	2 cut(s)	336, 918

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.