Rh7AG009600

Purple acid phosphatase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7A
OG0007589
Physical Location & Seq
Forward (+)
665484 .. 668419
2936 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7AG009600.1

Sequence Viewer

Length: 810 bp
ATGGGAATAATCGGAGAGAAATTAAACATAGACTTTGTGGTTTCAACTGGGGATAACTTTTACGAGAGGGGATTGACCAGCGTAAACGACCCCATGTATCCCGAGTCCTTTACTCAAATCTACACTGCTCAGAGCCTCCAAAAACAATGGTACATTGTACTTGGGAACCATGACTACAGGGGAAATGCTTTGGCACAGCTGAGTCCAGTTCTTCGGAAGATGGACAGCCGGTGGCTTTGCCTGAGGTCATTTCTCGTCAACACGAAAATTGCAGACTTCTTCTTCATCGATACCAATCCATTTGTGGACAAGTACTGGTCCAACCCAAAGCACTACAAGCACGATTGGAGAGGTGTCGTTCCTAGGCAGCGCTACCTCTCTACCCTCTTGAAGGATCTGGATTTTGCATTGAGAAATTCTACTGCAAACTGGAAGATTGTCGTTGCACATCATACAATCAGAAGCGTAGGGCATCACGGGGATACCCAGGAAATAGTAGACCAGATTCTTCCCATTCTCGAGGCAAATAATGTTAGAGCCTACATAAACGGACATGACCACTGCTTGGAACACATGAGTAGCACCAATGGCCAAATACAATTCTTGACTACTGGTGGTGGCTCCAAGGCATGGAAAGGTGACCTCTCTAGGTTGAATCAAGGCGGGTATGAGTTTTACTACGATGGGCAAGGCTTCCTCTCTGCTGAAATTCGACCAACCGATGCAGAATTTGCATTCTACGATGTTTCCGGTAGAGTTCTGCATCGTTTCAATATATCCAATTCCAAGGGGCTTCACAGTTCCATGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00740 ko01100 ko04142 ko04380 ko05323 map00740 map01100 map04142 map04380 map05323
Pfam Domains
Protein Families
Metallophos

Protein Analysis

269

Amino Acids

30.82

Weight (kDa)

7.21

Isoelectric Point (pI)

35.54

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Metallophos PF00149 5 - 188 3.4e-16 Calcineurin-like phosphoesterase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 2 cut(s) 565, 630
AccI GTMKAC 1 cut(s) 498
AciI CCGC 1 cut(s) 663
AclWI GGATC 1 cut(s) 402
AcoI YGGCCR 1 cut(s) 589
AcsI RAATTY 3 cut(s) 415, 708, 728
AfaI GTAC 3 cut(s) 152, 159, 314
AfeI AGCGCT 1 cut(s) 371
AfiI CCNNNNNNNGG 3 cut(s) 391, 565, 630
AgsI TTSAA 4 cut(s) 45, 391, 655, 772
AjnI CCWGG 1 cut(s) 486
AluBI AGCT 1 cut(s) 199
AluI AGCT 1 cut(s) 199
AlwI GGATC 1 cut(s) 402
Ama87I CYCGRG 2 cut(s) 101, 518
Aor51HI AGCGCT 1 cut(s) 371
AoxI GGCC 1 cut(s) 589
ApeKI GCWGC 1 cut(s) 367
ApoI RAATTY 3 cut(s) 415, 708, 728
AspA2I CCTAGG 1 cut(s) 362
AspLEI GCGC 1 cut(s) 372
AspS9I GGNCC 1 cut(s) 318
AsuHPI GGTGA 1 cut(s) 650
AvaI CYCGRG 2 cut(s) 101, 518
AvaII GGWCC 1 cut(s) 318
AvrII CCTAGG 1 cut(s) 362
AxyI CCTNAGG 1 cut(s) 242
BalI TGGCCA 1 cut(s) 591
BbvI GCAGC 1 cut(s) 379
BccI CCATC 2 cut(s) 214, 677
BciT130I CCWGG 1 cut(s) 488
BciVI GTATCC 2 cut(s) 108, 475
BfaI CTAG 2 cut(s) 363, 648
BfmI CTRYAG 1 cut(s) 175
BfoI RGCGCY 1 cut(s) 373
BfuI GTATCC 2 cut(s) 108, 475
BisI GCNGC 1 cut(s) 368
BlnI CCTAGG 1 cut(s) 362
BlsI GCNGC 1 cut(s) 369
BmcAI AGTACT 1 cut(s) 314
Bme1390I CCNGG 1 cut(s) 488
Bme18I GGWCC 1 cut(s) 318
BmeT110I CYCGRG 2 cut(s) 101, 518
BmgT120I GGNCC 1 cut(s) 318
BmiI GGNNCC 2 cut(s) 167, 622
BmrFI CCNGG 1 cut(s) 488
BmrI ACTGGG 1 cut(s) 57
BmsI GCATC 3 cut(s) 481, 712, 772
BmuI ACTGGG 1 cut(s) 57
Bsa29I ATCGAT 1 cut(s) 288
BsaBI GATNNNNATC 1 cut(s) 294
BsaJI CCNNGG 4 cut(s) 362, 486, 624, 786
BsaWI WCCGGW 1 cut(s) 749
Bsc4I CCNNNNNNNGG 3 cut(s) 391, 565, 630
Bse118I RCCGGY 1 cut(s) 228
Bse1I ACTGG 5 cut(s) 52, 206, 320, 434, 616
Bse21I CCTNAGG 1 cut(s) 242
Bse8I GATNNNNATC 1 cut(s) 294
BseBI CCWGG 1 cut(s) 488
BseCI ATCGAT 1 cut(s) 288
BseDI CCNNGG 4 cut(s) 362, 486, 624, 786
BseJI GATNNNNATC 1 cut(s) 294
BseLI CCNNNNNNNGG 3 cut(s) 391, 565, 630
BseMII CTCAG 3 cut(s) 143, 191, 233
BseNI ACTGG 5 cut(s) 52, 206, 320, 434, 616
BseXI GCAGC 1 cut(s) 379
BshFI GGCC 1 cut(s) 591
BshVI ATCGAT 1 cut(s) 288
BsiHKCI CYCGRG 2 cut(s) 101, 518
BsiSI CCGG 2 cut(s) 229, 750
BslI CCNNNNNNNGG 3 cut(s) 391, 565, 630
BsmI GAATGC 1 cut(s) 734
BsnI GGCC 1 cut(s) 591
BsoBI CYCGRG 2 cut(s) 101, 518
Bsp143I GATC 1 cut(s) 394
BspACI CCGC 1 cut(s) 663
BspANI GGCC 1 cut(s) 591
BspCNI CTCAG 3 cut(s) 142, 192, 234
BspDI ATCGAT 1 cut(s) 288
BspLI GGNNCC 2 cut(s) 167, 622
BspPI GGATC 1 cut(s) 402
BsrFI RCCGGY 1 cut(s) 228
BsrI ACTGG 5 cut(s) 52, 206, 320, 434, 616
BssAI RCCGGY 1 cut(s) 228
BssECI CCNNGG 4 cut(s) 362, 486, 624, 786
BssMI GATC 1 cut(s) 394
BssT1I CCWWGG 3 cut(s) 362, 624, 786
Bst2UI CCWGG 1 cut(s) 488
Bst4CI ACNGT 1 cut(s) 800
BstAPI GCANNNNNTGC 1 cut(s) 731
BstDEI CTNAG 3 cut(s) 129, 200, 242
BstEII GGTNACC 1 cut(s) 638
BstENI CCTNNNNNAGG 1 cut(s) 389
BstH2I RGCGCY 1 cut(s) 373
BstHHI GCGC 1 cut(s) 372
BstKTI GATC 1 cut(s) 397
BstMBI GATC 1 cut(s) 394
BstMWI GCNNNNNNNGC 3 cut(s) 337, 588, 731
BstNI CCWGG 1 cut(s) 488
BstPI GGTNACC 1 cut(s) 638
BstSCI CCNGG 1 cut(s) 486
BstSFI CTRYAG 1 cut(s) 175
BstV1I GCAGC 1 cut(s) 379
BstX2I RGATCY 1 cut(s) 394
BstYI RGATCY 1 cut(s) 394
Bsu15I ATCGAT 1 cut(s) 288
Bsu36I CCTNAGG 1 cut(s) 242
BsuI GTATCC 2 cut(s) 108, 475
BsuRI GGCC 1 cut(s) 591
BsuTUI ATCGAT 1 cut(s) 288
BtsI GCAGTG 2 cut(s) 123, 559
BtsIMutI CAGTG 2 cut(s) 123, 559
CfoI GCGC 1 cut(s) 372
Cfr10I RCCGGY 1 cut(s) 228
Cfr13I GGNCC 1 cut(s) 318
ClaI ATCGAT 1 cut(s) 288
Csp6I GTAC 3 cut(s) 151, 158, 313
CviAII CATG 6 cut(s) 94, 170, 554, 574, 630, 805
CviJI RGCY 9 cut(s) 135, 199, 228, 235, 539, 591, 621, 693, 793
CviKI_1 RGCY 9 cut(s) 135, 199, 228, 235, 539, 591, 621, 693, 793
CviQI GTAC 3 cut(s) 151, 158, 313
DdeI CTNAG 3 cut(s) 129, 200, 242
DpnI GATC 1 cut(s) 396
DpnII GATC 1 cut(s) 394
EaeI YGGCCR 1 cut(s) 589
Eco130I CCWWGG 3 cut(s) 362, 624, 786
Eco47I GGWCC 1 cut(s) 318
Eco47III AGCGCT 1 cut(s) 371
Eco81I CCTNAGG 1 cut(s) 242
Eco88I CYCGRG 2 cut(s) 101, 518
Eco91I GGTNACC 1 cut(s) 638
EcoNI CCTNNNNNAGG 1 cut(s) 389
EcoO65I GGTNACC 1 cut(s) 638
EcoRII CCWGG 1 cut(s) 486
EcoT14I CCWWGG 3 cut(s) 362, 624, 786
ErhI CCWWGG 3 cut(s) 362, 624, 786
FaeI CATG 6 cut(s) 97, 173, 557, 577, 633, 808
FatI CATG 6 cut(s) 93, 169, 553, 573, 629, 804
FauI CCCGC 1 cut(s) 656
FblI GTMKAC 1 cut(s) 498
Fnu4HI GCNGC 1 cut(s) 368
Fsp4HI GCNGC 1 cut(s) 368
FspBI CTAG 2 cut(s) 363, 648
GlaI GCGC 1 cut(s) 371
GluI GCNGC 1 cut(s) 368
HaeII RGCGCY 1 cut(s) 373
HaeIII GGCC 1 cut(s) 591
HapII CCGG 2 cut(s) 229, 750
HhaI GCGC 1 cut(s) 372
Hin1II CATG 6 cut(s) 97, 173, 557, 577, 633, 808
Hin6I GCGC 1 cut(s) 370
HinP1I GCGC 1 cut(s) 370
HincII GTYRAC 1 cut(s) 259
HindII GTYRAC 1 cut(s) 259
HinfI GANTC 4 cut(s) 104, 202, 505, 655
HpaII CCGG 2 cut(s) 229, 750
HphI GGTGA 1 cut(s) 650
Hpy166II GTNNAC 4 cut(s) 85, 259, 307, 499
Hpy188I TCNGA 4 cut(s) 14, 132, 216, 461
Hpy188III TCNNGA 5 cut(s) 101, 388, 398, 518, 604
Hpy8I GTNNAC 4 cut(s) 85, 259, 307, 499
HpyAV CCTTC 1 cut(s) 385
HpyCH4III ACNGT 1 cut(s) 800
HpyCH4V TGCA 7 cut(s) 272, 407, 425, 446, 725, 734, 763
HpyF10VI GCNNNNNNNGC 3 cut(s) 337, 588, 731
HpyF3I CTNAG 3 cut(s) 129, 200, 242
Hsp92II CATG 6 cut(s) 97, 173, 557, 577, 633, 808
HspAI GCGC 1 cut(s) 370
Kzo9I GATC 1 cut(s) 394
LmnI GCTCC 1 cut(s) 626
Lsp1109I GCAGC 1 cut(s) 379
LweI GCATC 3 cut(s) 481, 712, 772
MaeI CTAG 2 cut(s) 363, 648
MaeIII GTNAC 1 cut(s) 638
MalI GATC 1 cut(s) 396
MboI GATC 1 cut(s) 394
MboII GAAGA 6 cut(s) 203, 229, 271, 274, 445, 500
MflI RGATCY 1 cut(s) 394
MlsI TGGCCA 1 cut(s) 591
MluCI AATT 7 cut(s) 20, 267, 415, 599, 708, 728, 781
MluNI TGGCCA 1 cut(s) 591
MlyI GAGTC 2 cut(s) 113, 211
MmeI TCCRAC 1 cut(s) 345
MnlI CCTC 9 cut(s) 60, 146, 237, 344, 386, 395, 514, 653, 707
Mox20I TGGCCA 1 cut(s) 591
MscI TGGCCA 1 cut(s) 591
MseI TTAA 1 cut(s) 23
Msp20I TGGCCA 1 cut(s) 591
MspA1I CMGCKG 1 cut(s) 199
MspI CCGG 2 cut(s) 229, 750
MspR9I CCNGG 1 cut(s) 488
Mva1269I GAATGC 1 cut(s) 734
MvaI CCWGG 1 cut(s) 488
MwoI GCNNNNNNNGC 3 cut(s) 337, 588, 731
NdeII GATC 1 cut(s) 394
NlaIII CATG 6 cut(s) 97, 173, 557, 577, 633, 808
NlaIV GGNNCC 2 cut(s) 167, 622
NmuCI GTSAC 1 cut(s) 638
PaeR7I CTCGAG 1 cut(s) 518
PctI GAATGC 1 cut(s) 734
PfeI GAWTC 2 cut(s) 505, 655
PflMI CCANNNNNTGG 2 cut(s) 565, 630
PkrI GCNGC 1 cut(s) 369
PleI GAGTC 2 cut(s) 112, 210
PpsI GAGTC 2 cut(s) 112, 210
Psp6I CCWGG 1 cut(s) 486
PspEI GGTNACC 1 cut(s) 638
PspGI CCWGG 1 cut(s) 486
PspN4I GGNNCC 2 cut(s) 167, 622
PspPI GGNCC 1 cut(s) 318
PsrI GAACNNNNNNTAC 2 cut(s) 158, 190
PsuI RGATCY 1 cut(s) 394
PvuII CAGCTG 1 cut(s) 199
RsaI GTAC 3 cut(s) 152, 159, 314
RsaNI GTAC 3 cut(s) 151, 158, 313
SaqAI TTAA 1 cut(s) 23
SatI GCNGC 1 cut(s) 368
Sau3AI GATC 1 cut(s) 394
Sau96I GGNCC 1 cut(s) 318
ScaI AGTACT 1 cut(s) 314
SchI GAGTC 2 cut(s) 113, 211
ScrFI CCNGG 1 cut(s) 488
SetI ASST 7 cut(s) 201, 248, 355, 378, 640, 645, 653
SfaNI GCATC 3 cut(s) 481, 712, 772
SfcI CTRYAG 1 cut(s) 175
Sfr274I CTCGAG 1 cut(s) 518
SinI GGWCC 1 cut(s) 318
SlaI CTCGAG 1 cut(s) 518
SmlI CTYRAG 1 cut(s) 518
SmoI CTYRAG 1 cut(s) 518
Sse9I AATT 7 cut(s) 20, 267, 415, 599, 708, 728, 781
SsiI CCGC 1 cut(s) 663
SspMI CTAG 2 cut(s) 363, 648
StyD4I CCNGG 1 cut(s) 486
StyI CCWWGG 3 cut(s) 362, 624, 786
TaaI ACNGT 1 cut(s) 800
TaqI TCGA 3 cut(s) 288, 519, 712
TasI AATT 7 cut(s) 20, 267, 415, 599, 708, 728, 781
TatI WGTACW 2 cut(s) 157, 312
TfiI GAWTC 2 cut(s) 505, 655
Tru1I TTAA 1 cut(s) 23
Tru9I TTAA 1 cut(s) 23
TscAI CASTG 2 cut(s) 130, 566
TseFI GTSAC 1 cut(s) 638
TseI GCWGC 1 cut(s) 367
Tsp45I GTSAC 1 cut(s) 638
TspDTI ATGAA 1 cut(s) 274
TspGWI ACGGA 1 cut(s) 564
TspRI CASTG 2 cut(s) 130, 566
Van91I CCANNNNNTGG 2 cut(s) 565, 630
VpaK11BI GGWCC 1 cut(s) 318
XagI CCTNNNNNAGG 1 cut(s) 389
XapI RAATTY 3 cut(s) 415, 708, 728
XcmI CCANNNNNNNNNTGG 1 cut(s) 301
XhoI CTCGAG 1 cut(s) 518
XmaJI CCTAGG 1 cut(s) 362
XmiI GTMKAC 1 cut(s) 498
XspI CTAG 2 cut(s) 363, 648
ZrmI AGTACT 1 cut(s) 314
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.