Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp05

Orthogroup ID

OG0007589

Physical Location & Seq

Genomic Coordinates Reverse (-)

17972762 .. 17975835

Gene Structure 3074 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.5G237800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 996 bp

ATGTCCATGGGTTTCCTGTGGCTGTGGGTGGTTATTTGCATGTACAATATTATTTGGTTGAGCTTTGTTTCTGTGTCGACAGCCGAGCTTCAGCGATTTGAGCACCCTGTCAAAGCCGATGGGTCACTTAGCTTCTTGGCGATTGGTGATTGGGGCAGAAGGGGTGCTTACAATCAATCTCAAGTAGCTTATCAGATGGGAGAGATTGGAGCCAAATTAAACATAGACTTCGTGATCTCTACTGGGGATAATTTTTACAGCAGGGGATTGACCAGCGTAAATGACCCTGCATTTGTGGAGTCGTTTACTGAAATCTACACTGCTAAGAGCCTCCAAAAGCAATGGTATATTGTTCTTGGCAACCATGACTACAGGGGAAATGCTTTGGCCCAATTGAGCCCAGTCCTTAGGAAGATCGACAGCCGCTGGCTTTGCCTCAGGTCCTTTCTTGTTAACACAAAAATTGCAGACTTCTTCTTCATCGACACCAATCCTTTTGTGGACAAGTACTTTCTGAGGCAAAAGCACTACCAGCATGACTGGAGAGGTGTGCTTCCTAGGAAACAGTACACCTCCAACCTCTTGAAGGATCTAGATTTTGCATTGAGAAATTCTTCTGCAAACTGGAAAGTTGTCGTCGGACATCATACAATCCGAAGCATAGGGCATCATGGAGACACCAAAGAAGTAGTAGACCAGATTCTTCCCATTCTAGAGGCAAACAACGTTGATGCGTACATAAATGGACACGACCACTGCTTGGAACACATAAGCAGCACCAACAGCCAAATCCAATTCTTGACCAGTGGTGGTGGGTCGAAAGCATGGAAGGGTGACATTAAAATGAAAAGGGATGGGTCCAAGTTTTACTATGACGGGCAGGGTTTCTTATCTGCACAATTTACAGAGACTGATGCTGAATTTGCATTCTACGATGTATCTGGCACACTTCTGCATCGTCTGAATCTATCCAAGCTTCTTTACGATTCCATGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko00740 ko01100 ko04142 ko04380 ko05323 map00740 map01100 map04142 map04380 map05323

Pfam Domains

Protein Families

Metallophos

Protein Analysis

332

Amino Acids

37.85

Weight (kDa)

7.2

Isoelectric Point (pI)

42.2

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007589)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G14700 AT1G14700 AT1G14700 AT1G14700 AT1G25230 AT1G25230 AT1G25230 AT2G01890 AT2G01890 AT2G01890
malus_domestica	MD06G1233400.v1.1
prunus_persica	Prupe.5G237800_v2.0.a1
pyrus_communis	pycom06g20800
rosa_chinensis	RchiOBHm_Chr7g0177851
rosa_laevigata	RLG00000005497
rosa_multiflora	Rmu_sc0006214.1_g000005
rosa_roxburghii	Rroxscaffold_3G00275500
rosa_rugosa	Rorug06G0410100 Rorug06G0410200
rosa_samantha	Rh7AG009600 Rh7BG009700 Rh7CG009800 Rh7DG009700
rosa_wichuraiana	Rw7G000800

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	760
AccI	GTMKAC	2 cut(s)	77, 693
AciI	CCGC	1 cut(s)	424
AclI	AACGTT	1 cut(s)	726
AclWI	GGATC	1 cut(s)	597
AcsI	RAATTY	2 cut(s)	610, 920
AcuI	CTGAAG	1 cut(s)	74
AfaI	GTAC	4 cut(s)	44, 509, 569, 737
AfiI	CCNNNNNNNGG	2 cut(s)	586, 760
AgsI	TTSAA	1 cut(s)	586
AluBI	AGCT	5 cut(s)	63, 88, 132, 188, 976
AluI	AGCT	5 cut(s)	63, 88, 132, 188, 976
Alw21I	GWGCWC	1 cut(s)	105
Alw26I	GTCTC	2 cut(s)	669, 902
AlwI	GGATC	1 cut(s)	597
AlwNI	CAGNNNCTG	2 cut(s)	426, 911
AoxI	GGCC	1 cut(s)	387
ApeKI	GCWGC	1 cut(s)	774
ApoI	RAATTY	2 cut(s)	610, 920
ArsI	GACNNNNNNTTYG	2 cut(s)	275, 307
Asp700I	GAANNNNTTC	1 cut(s)	613
AspA2I	CCTAGG	1 cut(s)	557
AspS9I	GGNCC	3 cut(s)	388, 441, 858
AsuHPI	GGTGA	2 cut(s)	158, 845
AvaII	GGWCC	2 cut(s)	441, 858
AvrII	CCTAGG	1 cut(s)	557
AxyI	CCTNAGG	2 cut(s)	407, 437
BanII	GRGCYC	1 cut(s)	401
Bbv12I	GWGCWC	1 cut(s)	105
BbvI	GCAGC	1 cut(s)	786
BccI	CCATC	3 cut(s)	113, 190, 848
BcoDI	GTCTC	2 cut(s)	669, 902
BfaI	CTAG	3 cut(s)	558, 593, 713
BfmI	CTRYAG	1 cut(s)	370
BisI	GCNGC	2 cut(s)	424, 775
BlnI	CCTAGG	1 cut(s)	557
BlsI	GCNGC	2 cut(s)	425, 776
BmcAI	AGTACT	1 cut(s)	509
Bme18I	GGWCC	2 cut(s)	441, 858
BmgT120I	GGNCC	3 cut(s)	388, 441, 858
BmiI	GGNNCC	2 cut(s)	211, 859
BmrI	ACTGGG	2 cut(s)	252, 395
BmsI	GCATC	4 cut(s)	676, 721, 904, 964
BmuI	ACTGGG	2 cut(s)	252, 395
BpmI	CTGGAG	1 cut(s)	562
BpuEI	CTTGAG	1 cut(s)	165
BsaJI	CCNNGG	2 cut(s)	6, 557
Bsc4I	CCNNNNNNNGG	2 cut(s)	586, 760
Bse1I	ACTGG	5 cut(s)	247, 401, 545, 629, 804
Bse21I	CCTNAGG	2 cut(s)	407, 437
Bse3DI	GCAATG	1 cut(s)	347
BseDI	CCNNGG	2 cut(s)	6, 557
BseGI	GGATG	1 cut(s)	859
BseLI	CCNNNNNNNGG	2 cut(s)	586, 760
BseMI	GCAATG	1 cut(s)	347
BseMII	CTCAG	2 cut(s)	451, 506
BseNI	ACTGG	5 cut(s)	247, 401, 545, 629, 804
BseXI	GCAGC	1 cut(s)	786
BsgI	GTGCAG	1 cut(s)	879
BshFI	GGCC	1 cut(s)	389
BsiHKAI	GWGCWC	1 cut(s)	105
BslI	CCNNNNNNNGG	2 cut(s)	586, 760
BsmAI	GTCTC	2 cut(s)	669, 902
BsmI	GAATGC	1 cut(s)	926
BsnI	GGCC	1 cut(s)	389
Bsp1286I	GDGCHC	2 cut(s)	105, 401
Bsp1407I	TGTACA	1 cut(s)	42
Bsp143I	GATC	3 cut(s)	234, 414, 589
Bsp19I	CCATGG	1 cut(s)	6
BspACI	CCGC	1 cut(s)	424
BspANI	GGCC	1 cut(s)	389
BspCNI	CTCAG	2 cut(s)	450, 507
BspLI	GGNNCC	2 cut(s)	211, 859
BspPI	GGATC	1 cut(s)	597
BsrDI	GCAATG	1 cut(s)	347
BsrGI	TGTACA	1 cut(s)	42
BsrI	ACTGG	5 cut(s)	247, 401, 545, 629, 804
BssECI	CCNNGG	2 cut(s)	6, 557
BssMI	GATC	3 cut(s)	234, 414, 589
BssT1I	CCWWGG	2 cut(s)	6, 557
Bst4CI	ACNGT	1 cut(s)	567
BstAUI	TGTACA	1 cut(s)	42
BstC8I	GCNNGC	1 cut(s)	428
BstDEI	CTNAG	5 cut(s)	128, 324, 407, 437, 515
BstDSI	CCRYGG	1 cut(s)	6
BstENI	CCTNNNNNAGG	1 cut(s)	584
BstF5I	GGATG	1 cut(s)	859
BstKTI	GATC	3 cut(s)	237, 417, 592
BstMAI	GTCTC	2 cut(s)	669, 902
BstMBI	GATC	3 cut(s)	234, 414, 589
BstMWI	GCNNNNNNNGC	5 cut(s)	100, 432, 532, 783, 923
BstNSI	RCATGY	1 cut(s)	43
BstSFI	CTRYAG	1 cut(s)	370
BstV1I	GCAGC	1 cut(s)	786
BstX2I	RGATCY	1 cut(s)	589
BstYI	RGATCY	1 cut(s)	589
Bsu36I	CCTNAGG	2 cut(s)	407, 437
BsuRI	GGCC	1 cut(s)	389
BtgI	CCRYGG	1 cut(s)	6
BtsCI	GGATG	1 cut(s)	859
BtsI	GCAGTG	2 cut(s)	318, 754
BtsIMutI	CAGTG	3 cut(s)	318, 754, 811
Cac8I	GCNNGC	1 cut(s)	428
CaiI	CAGNNNCTG	2 cut(s)	426, 911
Cfr13I	GGNCC	3 cut(s)	388, 441, 858
Csp6I	GTAC	4 cut(s)	43, 508, 568, 736
CviAII	CATG	7 cut(s)	7, 40, 365, 536, 671, 825, 991
CviQI	GTAC	4 cut(s)	43, 508, 568, 736
DdeI	CTNAG	5 cut(s)	128, 324, 407, 437, 515
DpnI	GATC	3 cut(s)	236, 416, 591
DpnII	GATC	3 cut(s)	234, 414, 589
Eco130I	CCWWGG	2 cut(s)	6, 557
Eco24I	GRGCYC	1 cut(s)	401
Eco47I	GGWCC	2 cut(s)	441, 858
Eco57I	CTGAAG	1 cut(s)	74
Eco81I	CCTNAGG	2 cut(s)	407, 437
EcoNI	CCTNNNNNAGG	1 cut(s)	584
EcoO109I	RGGNCCY	1 cut(s)	441
EcoT14I	CCWWGG	2 cut(s)	6, 557
EcoT38I	GRGCYC	1 cut(s)	401
ErhI	CCWWGG	2 cut(s)	6, 557
FaeI	CATG	7 cut(s)	10, 43, 368, 539, 674, 828, 994
FalI	AAGNNNNNCTT	2 cut(s)	151, 183
FatI	CATG	7 cut(s)	6, 39, 364, 535, 670, 824, 990
FblI	GTMKAC	2 cut(s)	77, 693
Fnu4HI	GCNGC	2 cut(s)	424, 775
FokI	GGATG	1 cut(s)	866
FriOI	GRGCYC	1 cut(s)	401
Fsp4HI	GCNGC	2 cut(s)	424, 775
FspBI	CTAG	3 cut(s)	558, 593, 713
GluI	GCNGC	2 cut(s)	424, 775
GsuI	CTGGAG	1 cut(s)	562
HaeIII	GGCC	1 cut(s)	389
Hin1II	CATG	7 cut(s)	10, 43, 368, 539, 674, 828, 994
HincII	GTYRAC	2 cut(s)	78, 454
HindII	GTYRAC	2 cut(s)	78, 454
HindIII	AAGCTT	1 cut(s)	974
HinfI	GANTC	4 cut(s)	299, 700, 964, 986
HpaI	GTTAAC	1 cut(s)	454
HphI	GGTGA	2 cut(s)	158, 845
Hpy166II	GTNNAC	6 cut(s)	78, 306, 454, 502, 570, 694
Hpy188I	TCNGA	5 cut(s)	195, 516, 641, 656, 963
Hpy188III	TCNNGA	5 cut(s)	232, 583, 593, 713, 799
Hpy8I	GTNNAC	6 cut(s)	78, 306, 454, 502, 570, 694
Hpy99I	CGWCG	1 cut(s)	641
HpyAV	CCTTC	3 cut(s)	153, 580, 823
HpyCH4III	ACNGT	1 cut(s)	567
HpyCH4IV	ACGT	1 cut(s)	726
HpyCH4V	TGCA	8 cut(s)	39, 290, 467, 602, 620, 896, 926, 955
HpyF10VI	GCNNNNNNNGC	5 cut(s)	100, 432, 532, 783, 923
HpyF3I	CTNAG	5 cut(s)	128, 324, 407, 437, 515
HpySE526I	ACGT	1 cut(s)	726
Hsp92II	CATG	7 cut(s)	10, 43, 368, 539, 674, 828, 994
KspAI	GTTAAC	1 cut(s)	454
Kzo9I	GATC	3 cut(s)	234, 414, 589
LmnI	GCTCC	1 cut(s)	209
Lsp1109I	GCAGC	1 cut(s)	786
LweI	GCATC	4 cut(s)	676, 721, 904, 964
MaeI	CTAG	3 cut(s)	558, 593, 713
MaeII	ACGT	1 cut(s)	726
MaeIII	GTNAC	2 cut(s)	123, 833
MalI	GATC	3 cut(s)	236, 416, 591
MboI	GATC	3 cut(s)	234, 414, 589
MboII	GAAGA	5 cut(s)	424, 466, 469, 606, 695
MfeI	CAATTG	1 cut(s)	392
MflI	RGATCY	1 cut(s)	589
MhlI	GDGCHC	2 cut(s)	105, 401
MluCI	AATT	8 cut(s)	215, 250, 392, 462, 610, 794, 899, 920
MlyI	GAGTC	1 cut(s)	308
MmeI	TCCRAC	2 cut(s)	600, 619
MnlI	CCTC	7 cut(s)	341, 446, 510, 539, 583, 590, 709
MroXI	GAANNNNTTC	1 cut(s)	613
MseI	TTAA	3 cut(s)	218, 453, 840
MslI	CAYNNNNRTG	1 cut(s)	842
MspA1I	CMGCKG	1 cut(s)	426
MunI	CAATTG	1 cut(s)	392
Mva1269I	GAATGC	1 cut(s)	926
MwoI	GCNNNNNNNGC	5 cut(s)	100, 432, 532, 783, 923
NcoI	CCATGG	1 cut(s)	6
NdeII	GATC	3 cut(s)	234, 414, 589
NlaIII	CATG	7 cut(s)	10, 43, 368, 539, 674, 828, 994
NlaIV	GGNNCC	2 cut(s)	211, 859
NmeAIII	GCCGAG	1 cut(s)	109
NmuCI	GTSAC	2 cut(s)	123, 833
NspI	RCATGY	1 cut(s)	43
PctI	GAATGC	1 cut(s)	926
PdmI	GAANNNNTTC	1 cut(s)	613
PfeI	GAWTC	3 cut(s)	700, 964, 986
PflMI	CCANNNNNTGG	1 cut(s)	760
PkrI	GCNGC	2 cut(s)	425, 776
PleI	GAGTC	1 cut(s)	307
PpsI	GAGTC	1 cut(s)	307
PpuMI	RGGWCCY	1 cut(s)	441
Psp1406I	AACGTT	1 cut(s)	726
Psp5II	RGGWCCY	1 cut(s)	441
PspN4I	GGNNCC	2 cut(s)	211, 859
PspPI	GGNCC	3 cut(s)	388, 441, 858
PspPPI	RGGWCCY	1 cut(s)	441
PstNI	CAGNNNCTG	2 cut(s)	426, 911
PsuI	RGATCY	1 cut(s)	589
RsaI	GTAC	4 cut(s)	44, 509, 569, 737
RsaNI	GTAC	4 cut(s)	43, 508, 568, 736
RseI	CAYNNNNRTG	1 cut(s)	842
SalI	GTCGAC	1 cut(s)	76
SaqAI	TTAA	3 cut(s)	218, 453, 840
SatI	GCNGC	2 cut(s)	424, 775
Sau3AI	GATC	3 cut(s)	234, 414, 589
Sau96I	GGNCC	3 cut(s)	388, 441, 858
ScaI	AGTACT	1 cut(s)	509
SchI	GAGTC	1 cut(s)	308
SduI	GDGCHC	2 cut(s)	105, 401
SfaNI	GCATC	4 cut(s)	676, 721, 904, 964
SfcI	CTRYAG	1 cut(s)	370
SinI	GGWCC	2 cut(s)	441, 858
SmiMI	CAYNNNNRTG	1 cut(s)	842
SmlI	CTYRAG	1 cut(s)	180
SmoI	CTYRAG	1 cut(s)	180
Sse9I	AATT	8 cut(s)	215, 250, 392, 462, 610, 794, 899, 920
SsiI	CCGC	1 cut(s)	424
SspI	AATATT	1 cut(s)	49
SspMI	CTAG	3 cut(s)	558, 593, 713
StyI	CCWWGG	2 cut(s)	6, 557
TaaI	ACNGT	1 cut(s)	567
TaiI	ACGT	1 cut(s)	729
TaqI	TCGA	4 cut(s)	77, 417, 483, 818
TasI	AATT	8 cut(s)	215, 250, 392, 462, 610, 794, 899, 920
TatI	WGTACW	3 cut(s)	42, 507, 567
TauI	GCSGC	1 cut(s)	426
TfiI	GAWTC	3 cut(s)	700, 964, 986
Tru1I	TTAA	3 cut(s)	218, 453, 840
Tru9I	TTAA	3 cut(s)	218, 453, 840
TscAI	CASTG	3 cut(s)	325, 761, 811
TseFI	GTSAC	2 cut(s)	123, 833
TseI	GCWGC	1 cut(s)	774
Tsp45I	GTSAC	2 cut(s)	123, 833
TspDTI	ATGAA	2 cut(s)	469, 860
TspRI	CASTG	3 cut(s)	325, 761, 811
Van91I	CCANNNNNTGG	1 cut(s)	760
VpaK11BI	GGWCC	2 cut(s)	441, 858
XagI	CCTNNNNNAGG	1 cut(s)	584
XapI	RAATTY	2 cut(s)	610, 920
XbaI	TCTAGA	2 cut(s)	592, 712
XceI	RCATGY	1 cut(s)	43
XcmI	CCANNNNNNNNNTGG	1 cut(s)	496
XmaJI	CCTAGG	1 cut(s)	557
XmiI	GTMKAC	2 cut(s)	77, 693
XmnI	GAANNNNTTC	1 cut(s)	613
XspI	CTAG	3 cut(s)	558, 593, 713
ZrmI	AGTACT	1 cut(s)	509

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.